| Commit message (Collapse) | Author | Age |
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* gnu/packages/maths.scm (scotch): Update to 6.1.1.
[native-inputs]: Add GFORTRAN.
[arguments]: Set 'FC' in 'Makefile.in'.
(scotch32)[arguments]: Likewise.
(scotch-shared)[arguments]: Likewise.
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* gnu/packages/maths.scm (scotch)[properties]: New field.
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* gnu/packages/maths.scm (suitesparse): Update to 5.10.1.
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* gnu/packages/maths.scm (suitesparse)[inputs]: Replace LAPACK with
OPENBLAS.
[arguments]: Add "BLAS"and "LAPACK" to #:make-flags.
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* gnu/packages/maths.scm (maxima): Update to 5.45.1.
[home-page]: Follow redirect.
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OpenBLAS performs better than LAPACK, the reference implementation.
This is also consistent with the choice of BLAS/LAPACK implementations
made in most other packages.
* gnu/packages/maths.scm (petsc)[inputs]: Replace LAPACK by OPENBLAS.
[arguments]: Pass "--with-openblas=1".
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* gnu/packages/maths.scm (why3): Update to 1.3.3.
[arguments]: Adjust for newer ocaml-num.
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* gnu/packages/maths.scm (wxmaxima): Update to 21.05.2.
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* gnu/packages/maths.scm (maxima): Update to 5.45.0.
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This change was automated via the following command:
$ git ls-files | xargs sed -i 's/,qtbase)/,qtbase-5)/g'
$ git ls-files | xargs sed -i 's/inherit qtbase)/inherit qtbase-5)/g'
$ git ls-files | xargs sed -i 's/package-version qtbase)/package-version qtbase-5)/g'
$ git checkout etc # to clear some spurious changes
This is done so the qtbase package can be upgraded to version 6 in the
following commit.
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* gnu/packages/maths.scm (qalculate-gtk): Update to 3.19.0.
[phases]: Remove 'add-pot-file.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/maths (libqalculate): Update to 3.19.0.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/maths.scm (frama-c): New variable.
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* gnu/packages/maths.scm (why3): New variable.
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* gnu/packages/maths.scm (ipopt): Update to 3.13.4, update URL.
[license]: Change to LICENSE:EPL2.0.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/maths.scm (cbc): New variable.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/maths.scm (qhull)[arguments]: Add configure-flag to build
code position independent.
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This drops the package size by nearly 60%.
* gnu/packages/maths.scm (qhull)[arguments]: Add configure-flag to link
binaries to shared library.
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* gnu/packages/maths.scm (hypre)[source]: Change to new repository home.
[home-page]: Follow redirect.
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These packages use a different source/version from the inherited package, and
thus should not inherit replacements.
* gnu/packages/check.scm (googletest-1.8, python-pytest-runner-2): Use record
inheritance instead of PACKAGE/INHERIT.
* gnu/packages/crates-io.scm (rust-bindgen-0.49, rust-bytes-0.4,
rust-colored-1.9.1, rust-difference-1, rust-docopt-0.8, rust-html5ever-0.23,
rust-http-0.1, rust-http-body-0.1, rust-loom-0.2, rust-loom-0.1,
rust-pulldown-cmark-0.0.8, rust-ring-0.13, rust-rustls-0.12, rust-sct-0.3,
rust-term-0.2, rust-untrusted-0.6, rust-webpki-0.18, rust-webpki-roots-0.17,
rust-webpki-roots-0.14): Likewise.
* gnu/packages/emacs.scm (emacs-next, emacs-next-pgtk, guile-emacs): Likewise.
* gnu/packages/guile.scm (guile-2.2.4): Likewise.
* gnu/packages/maths.scm (hdf5-1.10, hdf5-1.12): Likewise.
* gnu/packages/protobuf.scm (protobuf-3.6, protobuf-3.5, python-protobuf-3.6):
Likewise.
* gnu/packages/python-web.scm (python2-html2text): Likewise.
* gnu/packages/python-xyz.scm (python-pygments/fixed, python2-numpy,
python2-urwid, python2-markdown, python2-fonttools): Likewise.
* gnu/packages/racket.scm (racket): Likewise.
* gnu/packages/sequoia.scm (sequoia4pEp): Likewise.
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* gnu/packages/maths.scm (numdiff): New variable.
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* gnu/packages/maths.scm (hdf5-1.8)[arguments]: Use [a-zA-Z] instead of [a-Z]
as range in regular expression.
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* gnu/packages/maths.scm (qhull): Update to 2020.2.
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* gnu/packages/maths.scm (arpack-ng-3.3.0)[name, home-page]: Remove.
[source]: Switch to GIT-FETCH. Inline uses of NAME and HOME-PAGE.
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* gnu/packages/maths.scm (arpack-ng): Update to 3.8.0.
[native-inputs]: Add PKG-CONFIG.
[inputs]: Add EIGEN.
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* gnu/packages/maths.scm (cglm): New public variable.
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* gnu/packages/maths.scm (libcerf): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/maths.scm (octave-cli, octave): Extended synopsis.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/maths.scm (xaos): Update to 4.2.1.
[arguments]: Patch call to "lrelease" in XaoS.pro.
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* gnu/packages/maths.scm (wxmaxima): Update to 21.04.0.
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Add deprecated aliases for packages removed in the parent commit.
* gnu/packages/maths.scm (blis-sandybridge, blis-haswell, blis-knl): New
variables.
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* gnu/packages/maths.scm (make-blis): Remove internal function.
Inline into ...
(bliss): ... this variable. Update to 0.8.1.
[native-inputs]: Add "python" and "perl".
[arguments]: Adjust 'configure' phase to take advantage of new support
for "configuration families" with runtime hardware detection. Select
configuration automatically based on target systems, and allow
"--blis-config=" in #:configure-flags to override the default.
When building for x86_64, include all supported microarchetecture
specializations. Add "--enable-verbose-make" configure flag for better
build logs. Stop ignoring other flags from #:configure-flags.
Remove explicit #:substitutable? argument: the package is now always
substitutable. Add (srfi srfi-1) to #:modules.
(blis/x86_64): Remove internal macro.
(blis-sandybridge): Remove package: included in 'blis'.
(blis-haswell): Remove package: included in 'blis'.
(blis-knl): Remove package: included in 'blis'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/qt.scm (python-sip): Update to 5.5.0.
(python-sip-4): New variable. Rename the old python-sip to python-sip-4.
(python2-sip): Inherit from python-sip-4.
* gnu/packages/maths.scm (veusz)[native-inputs]: Use python-sip-4.
* gnu/packages/pdf.scm (python-poppler-qt5): Use python-sip-4.
* gnu/packages/geo.scm (qgis)[arguments]: Fix build for python-sip@5.
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* gnu/packages/maths.scm (scotch-shared, pt-scotch-shared): New variables.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/maths.scm (suitesparse): Update to 5.9.0.
[arguments]: Use cc-for-target instead of hard-coding gcc.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/maths.scm (metis)[properties]: New field.
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* gnu/packages/maths.scm (wxmaxima): Update to 21.02.0.
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* gnu/packages/maths.scm (octave): Update to 6.2.0.
[source]: Download tar.xz tarball.
[native-inputs]: Remove lzip.
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* gnu/packages/maths.scm (slepc)[home-page]: Use HTTPS URI.
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* gnu/packages/maths.scm (elpa)[home-page]: Use HTTPS URI.
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* gnu/packages/maths.scm (hdf5-1.12): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/maths.scm (wxmaxima): Update to 21.01.0.
[inputs]: Remove libomp.
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Fixes CVE-2018-14033, CVE-2018-11206, CVE-2018-13870, CVE-2018-13869, and
CVE-2018-17435
* gnu/packages/maths.scm (hdf5-1.8): Update to 1.8.22.
* gnu/packages/patches/hdf5-1.8-mpi-deprecations.patch: Delete upstreamed
patch.
* gnu/local/mk (dist_patch_DATA): Remove it.
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* gnu/packages/maths.scm (wxmaxima): Update to 20.12.2.
[arguments]: Remove #:test-target and disable tests. Remove 'pre-check
phase.
[native-inputs]: Remove xorg-server-for-tests.
[inputs]: Add libomp.
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* gnu/packages/maths.scm (gnuplot): Update to 5.4.1.
[arguments]: Set GNUTERM in #:make-flags.
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* gnu/packages/maths.scm (suitesparse)[arguments]: Add to
configure-flags to install programs built with cmake to use 'lib', not
'lib64.'
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* gnu/packages/maths.scm (matio): Update to 1.5.19.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/maths.scm (octave, octave-cli): Update to 6.1.0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/maths.scm (glpk)[arguments]: Add configure-flag to skip
static library.
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* gnu/packages/maths.scm (glpk): Update to 5.0.
(glpk-4.65): New variable.
* gnu/packages/algebra.scm (giac)[inputs]: Replace glpk with glpk-4.
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