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* gnu: Add netcdf-fortran.Thomas Danckaert2017-04-30
| | | | * gnu/packages/maths.scm (netcdf-fortran): New variable.
* gnu: gnuplot: Update to 5.0.6.Kei Kebreau2017-04-22
| | | | * gnu/packages/maths.scm (gnuplot): Update to 5.0.6.
* gnu: Fix typos in descriptions.Tobias Geerinckx-Rice2017-04-17
| | | | | | | | | | | | | | | | | | | | | | * gnu/packages/admin.scm (di)[description]: Likewise. * gnu/packages/bioinformatics.scm (r-annotate)[description]: Likewise. * gnu/packages/datastructures.scm (sparsehash)[description]: Likewise. * gnu/packages/dns.scm (knot)[description]: Likewise. * gnu/packages/emacs.scm (emacs-idle-highlight)[synopsis, description]: Likewise. * gnu/packages/gnome.scm (libpeas)[description]: Likewise. * gnu/packages/gtk.scm (python2-pygtk)[description]: Likewise. * gnu/packages/kde-frameworks.scm (kactivities)[description]: Fix typo. * gnu/packages/libevent.scm (perl-anyevent)[description]: Likewise. * gnu/packages/machine-learning.scm (ghmm)[description]: Likewise. * gnu/packages/mail.scm (mlmmj)[description]: Likewise. * gnu/packages/maths.scm (vc)[description]: Likewise. * gnu/packages/music.scm (gx-super-fuzz-lv2)[description]: Likewise. * gnu/packages/networking.scm (nload)[description]: Likewise. * gnu/packages/python.scm (python-execnet)[description]: Likewise. * gnu/packages/terminals.scm (tilda)[description]: Likewise. * gnu/packages/python.scm (python-execnet, python-tables) (python2-coverage-test-runner, python2-rope)[description]: Likewise.
* gnu: octave: Build with gl2ps support.Arun Isaac2017-04-08
| | | | | | * gnu/packages/maths.scm (octave)[inputs]: Add gl2ps. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: flann: Move .mex file to a separate "octave" output.Ludovic Courtès2017-04-07
| | | | | | | | That way the closure of flann:out is down from 1 GiB to 290 MiB. * gnu/packages/maths.scm (flann)[outputs]: New field. [arguments]: Add 'set-octave-directory' phase.
* gnu: armadillo: Change license to ASL 2.0.Ricardo Wurmus2017-04-06
| | | | | | | Armadillo versions 7.800 and onwards are licensed under the Apache License 2.0. * gnu/packages/maths.scm (armadillo)[license]: Change to ASL 2.0.
* gnu: Remove armadillo-for-rcpparmadillo.Ricardo Wurmus2017-04-06
| | | | | | | | This package is no longer useful, because upstream does not keep the tarballs of older releases. We use the bundled armadillo sources in the r-rccparmadillo package instead. * gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Remove variable.
* gnu: armadillo: Update to 7.800.2.Ricardo Wurmus2017-04-06
| | | | * gnu/packages/maths.scm (armadillo): Update to 7.800.2.
* gnu: r-pracma: Update to 2.0.4.Ricardo Wurmus2017-04-06
| | | | * gnu/packages/maths.scm (r-pracma): Update to 2.0.4.
* Merge branch 'master' into core-updatesMarius Bakke2017-03-30
|\ | | | | | | Most conflicts are from 6fd52309b8f52c9bb59fccffac53e029ce94b698.
| * gnu: Use HTTPS for almost all gnu.org HOME-PAGEs.Tobias Geerinckx-Rice2017-03-30
| | | | | | | | All HTTP gnu.org (and supported subdomain) HOME-PAGEs changed to HTTPS.
* | gnu: gsl: Disable tests on aarch64-linux.Efraim Flashner2017-03-28
| | | | | | | | | | | | * gnu/packages/maths.scm (gsl)[arguments]: Do not run the test suite on aarch64-linux. [home-page]: Use https.
* | Merge branch 'master' into core-updatesLeo Famulari2017-03-27
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| * gnu: gnuplot: Enable tikz backend.Danny Milosavljevic2017-03-27
| | | | | | | | * gnu/packages/maths.scm (gnuplot)[inputs]: Add lua.
* | gnu: scotch: Build with flex-2.6.1.Efraim Flashner2017-03-23
| | | | | | | | | | * gnu/packages/maths.scm (scotch)[native-inputs]: Use flex-2.6.1 and not flex.
* | gnu: openblas: Add support for aarch64.Efraim Flashner2017-03-21
|/ | | | | * gnu/packages/maths.scm (openblas)[arguments]: Mark aarch64 as substitutable, build for target ARMv8.
* gnu: Add maxflow.John Darrington2017-03-18
| | | | * gnu/packages/maths.scm (maxflow): New variable.
* gnu: Add itpp.John Darrington2017-03-18
| | | | * gnu/packages/maths.scm (itpp): New variable.
* gnu: Add ocaml-gsl.Ben Woodcroft2017-03-17
| | | | * gnu/packages/maths.scm (ocaml-gsl): New variable.
* gnu: units: Update to 2.14.Tobias Geerinckx-Rice2017-03-15
| | | | * gnu/packages/maths.scm (units): Update to 2.14.
* gnu: octave: Build with curl and graphicsmagick.Arun Isaac2017-03-09
| | | | | | * gnu/packages/maths.scm (octave)[inputs]: Add curl and graphicsmagick. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: Add jacal.John Darrington2017-03-02
| | | | | * gnu/packages/maths.scm (jacal): New variable. * gnu/packages/patches/jacal-fix-texinfo.patch: New file.
* gnu: octave: Update to 4.2.1.Efraim Flashner2017-03-01
| | | | * gnu/packages/maths.scm (octave): Update to 4.2.1.
* gnu: wxmaxima: Downgrade to 16.04.2.Federico Beffa2017-02-28
| | | | | | * gnu/packages/maths.scm (wxmaxima): Do it. Signed-off-by: Kei Kebreau <kei@openmailbox.org>
* gnu: coda: Update to 2.18.Thomas Danckaert2017-02-27
| | | | | | * gnu/packages/python.scm (coda): Update to 2.18. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* installer: Aris: update synopis and description.John Darrington2017-02-17
| | | | | * gnu/packages/maths.scm (aris): Use the synopsis and description from the web page instead of the README file.
* gnu: Add aris.John Darrington2017-02-17
| | | | * gnu/packages/maths.scm(aris): New variable.
* gnu: wxmaxima: Update to 16.12.2.Kei Kebreau2017-02-10
| | | | * gnu/packages/maths.scm (wxmaxima): Update to 16.12.2.
* gnu: gmsh: Propagate opencascade-oce.Paul Garlick2017-02-09
| | | | | | | * gnu/packages/maths.scm (gmsh)[propagated-inputs]: Add opencascade-oce. [arguments]: Remove #:phases parameter for component8_in_a_box test Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: cddlib: Fix source URI.Ben Woodcroft2017-02-04
| | | | * gnu/packages/maths.scm (cddlib)[source]: Update source URI.
* gnu: reducelcs: Fix license.ng02017-02-01
| | | | | | * gnu/packages/maths.scm (reducelcs)[license]: Change to GPL3+. Signed-off-by: Kei Kebreau <kei@openmailbox.org>
* gnu: gmsh: Update to 2.16.0Paul Garlick2017-01-31
| | | | | | * gnu/packages/maths.scm (gmsh): Update to 2.16.0 Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: Add reducelcs.ng02017-01-30
| | | | | | * gnu/packages/maths.scm (reducelcs): New variable. Signed-off-by: Kei Kebreau <kei@openmailbox.org>
* gnu: Add opencascade-oce.Paul Garlick2017-01-30
| | | | | | * gnu/packages/maths.scm (opencascade-oce): New variable. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* gnu: glpk: Update to 4.61.Marius Bakke2017-01-23
| | | | | * gnu/packages/maths.scm (glpk): Update to 4.61. [home-page]: Use HTTPS.
* gnu: hdf4: Update to 4.2.12.Thomas Danckaert2017-01-09
| | | | | | * gnu/packages/maths.scm (hdf4): Update to 4.2.12. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: r-rcpparmadillo: Update to 0.7.600.1.0.Ricardo Wurmus2016-12-29
| | | | | | * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.600.1.0. * gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 7.600.1.
* gnu: armadillo: Update to 7.600.2.Ricardo Wurmus2016-12-29
| | | | * gnu/packages/maths.scm (armadillo): Update to 7.600.2.
* gnu: netcdf: Enable HDF4 support.Thomas Danckaert2016-12-24
| | | | | | | * gnu/packages/maths.scm (netcdf)[inputs]: Add hdf4-alt and libjpeg. [arguments]: Add "--enable-hdf4" configure flag. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: gnuplot: Update to 5.0.5.Kei Kebreau2016-12-18
| | | | * gnu/packages/maths.scm (gnuplot): Update to 5.0.5.
* gnu: wxmaxima: Update to 16.12.0.Kei Kebreau2016-12-18
| | | | * gnu/packages/maths.scm (wxmaxima): Update to 16.12.0.
* gnu: maxima: Update to 5.39.0.Kei Kebreau2016-12-18
| | | | * gnu/packages/maths.scm (maxima): Update to 5.39.0.
* gnu: gsl: Update to 2.3.Tobias Geerinckx-Rice2016-12-12
| | | | * gnu/packages/maths.scm (gsl): Update to 2.3.
* gnu: gmsh: Update to 2.15.0.Paul Garlick2016-12-09
| | | | | | * gnu/packages/maths.scm (gmsh): Update to 2.15.0. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
* gnu: netcdf: Upgrade to 4.4.1.1.Eric Bavier2016-12-01
| | | | | | | | | | | * gnu/packages/maths.scm (netcdf, netcdf-parallel-openmpi): Upgrade to 4.4.1.1. [source]: Adjust patch name, add netcdf-tst_h_par.patch * gnu/packages/patches/netcdf-config.date.patch: Rename to... * gnu/packages/patches/netcdf-date-time.patch: ...this. Adjust for latest source. * gnu/packages/patches/netcdf-tst_h_par.patch: New patch. * gnu/local.mk (dist_patch_DATA): Adjust patches.
* gnu: hdf5: Update to 1.8.18 [fixes CVE-2016-{4330,4331,4332,4333}].Leo Famulari2016-11-30
| | | | | * gnu/packages/maths.scm (hdf5): Update to 1.8.18. [source]: Add alternate URL.
* gnu: hdf5: Build the C++ interface.Ludovic Courtès2016-11-24
| | | | * gnu/packages/maths.scm (hdf5)[arguments]: Add #:configure-flags.
* gnu: Remove redundancy where mkdir-p <dir> is followed by install-file ↵Petter2016-11-21
| | | | | | | | | | | | | | | | | <file> <dir>. * gnu/packages/bioinformatics.scm (bwa)[arguments]: Remove redundant mkdir-p. (eigensoft)[arguments]: Likewise. (snap-aligner)[arguments]: Likewise. (pardre)[arguments]: Likewise. (piranha)[arguments]: Likewise. * gnu/packages/maths.scm (hypre)[arguments]: Likewise. * gnu/packages/mp3.scm (mpc123)[arguments]: Likewise. * gnu/packages/music.scm (tuxguitar)[arguments]: Likewise. * gnu/packages/pdf.scm (impressive)[arguments]: Likewise. * gnu/packages/qemu.scm (qemu)[arguments]: Likewise. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: octave: Update to 4.2.0.Efraim Flashner2016-11-15
| | | | | | * gnu/packages/maths.scm (octave): Update to 4.2.0. [native-inputs]: Add lzip. [home-page]: Use https.
* Merge branch 'core-updates'Ludovic Courtès2016-11-13
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