| Commit message (Collapse) | Author | Age |
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This is the result of running:
./pre-inst-env guix style --input-simplification=safe
and manually undoing changes on a dozen of packages to reduce
rebuilds (derivations for emacs, icecat, and libreoffice are unchanged.)
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This commit was obtained by running:
./pre-inst-env guix style
without any additional argument.
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* gnu/packages/machine-learning.scm (python2-scikit-learn)[arguments]: Do not
inherit; remove obsolete 'make-files-writable phase; disable one more failing
test in 'check phase.
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* gnu/packages/machine-learning.scm (libsvm)[arguments]: Add build phase
'build-lib; also install header file and shared library in the 'install phase.
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* gnu/packages/machine-learning.scm (ocaml-mcl)[arguments]: Add -fcommon.
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* gnu/packages/machine-learning.scm (mcl)[arguments]: Set CFLAGS.
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* gnu/packages/machine-learning.scm (randomjungle)[arguments]: Add build phase
'fix-compatibility-errors to patch type errors.
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* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 1.0.1.
[arguments]: Disable one failing network test.
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* gnu/packages/machine-learning.scm (python-scikit-learn)[arguments]: Respect
TESTS? in 'check phase.
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* gnu/packages/machine-learning.scm (python-pytorch): Add comment.
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* gnu/packages/machine-learning.scm (python-pytorch)[propagated-inputs]: Add
python-click.
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* gnu/packages/machine-learning.scm (python-pytorch)[arguments]: Do not set
PYTHONPATH; use add-installed-pythonpath instead.
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* gnu/packages/machine-learning.scm (python-pytorch): Update to 1.10.0.
* gnu/packages/patches/python-pytorch-system-libraries.patch: Adjust.
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* gnu/packages/machine-learning.scm (python-keras)
[phases]{check}: Also skip the test_stateful_metrics test.
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* (python-keras)[phases]: Delete trailing #t.
{check}: Honor TESTS?. Run the tests in parallel. Disable PEP8 lint.
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There are still many parts of the build that happen sequentially, but at least
this hastens the long build somewhat.
* gnu/packages/machine-learning.scm (tensorflow)[phases]: Remove trailing #t.
{build-pip-package}: Honor the PARALLEL-BUILD? argument.
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But keep the older variant for Tensorflow.
* gnu/packages/cpp.scm (abseil-cpp-20200923.3): Renamed older variant.
(abseil-cpp): New variable.
* gnu/packages/machine-learning.scm (tensorflow-lite)
[inputs]: Adjust to use the older abseil-cpp-20200923.3.
* gnu/packages/rpc.scm (grpc-1.16.1)[native-inputs]: Likewise.
Co-authored-by: Greg Hogan <code@greghogan.com>
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* gnu/packages/machine-learning.scm (python-xgboost): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/machine-learning.scm (xgboost): New variable.
* gnu/packages/patches/xgboost-use-system-dmlc-core.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/machine-learning.scm (dmlc-core): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/machine-learning.scm (python-pytorch)[source]: Delete
"third_party/NNPACK".
[inputs]: Add NNPACK.
[propagated-inputs]: Remove PYTHON-PEACHPY.
* gnu/packages/patches/python-pytorch-system-libraries.patch: Remove
hunk modifying NNPACK; add hunk to allow the use of our own NNPACK.
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* gnu/packages/machine-learning.scm (nnpack): New variable.
* gnu/packages/patches/nnpack-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
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* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.24.2.
[arguments]: Remove trailing #t.
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* gnu/packages/machine-learning.scm (python-hmmlearn): New variable.
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Conflicts:
gnu/packages/algebra.scm
gnu/packages/games.scm
gnu/packages/golang.scm
gnu/packages/kerberos.scm
gnu/packages/mail.scm
gnu/packages/python.scm
gnu/packages/ruby.scm
gnu/packages/scheme.scm
gnu/packages/tex.scm
gnu/packages/tls.scm
gnu/packages/version-control.scm
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* gnu/packages/machine-learning.scm (python-pytorch)[arguments]: Remove
leftover comment.
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* gnu/packages/machine-learning.scm (python-pytorch): New variable.
* gnu/packages/patches/python-pytorch-runpath.patch,
gnu/packages/patches/python-pytorch-system-libraries.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
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* gnu/packages/machine-learning.scm (gemmlowp): New variable, based on
'gemmlowp-for-tensorflow'.
(gemmlowp-for-tensorflow): Rewrite to inherit from GEMMLOWP.
[properties]: New field.
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* gnu/packages/machine-learning.scm (gloo)[arguments]: In 'check' phase,
honor #:tests?.
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* gnu/packages/machine-learning.scm (gloo): Update to c22a5cf.
[inputs]: New field.
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* gnu/packages/machine-learning.scm (tensorflow-lite): New variable.
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* gnu/packages/machine-learning.scm (onnx-optimizer): New variable.
* gnu/packages/patches/onnx-optimizer-system-library.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
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* gnu/packages/machine-learning.scm (onnx)[source]: Change to
'git-fetch'. Add "onnx-skip-model-downloads.patch".
[arguments]: Add 'make-test-directory-writable' phase.
* gnu/packages/patches/onnx-skip-model-downloads.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
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* gnu/packages/machine-learning.scm (python-onnx): Rename to...
(onnx): ... this, and change 'name' field accordingly.
(python-onnx): New variable.
* gnu/packages/patches/python-onnx-shared-libraries.patch: Rename to...
* gnu/packages/patches/onnx-shared-libraries.patch: ... this.
* gnu/packages/patches/python-onnx-use-system-googletest.patch: Rename
to...
* gnu/packages/patches/onnx-use-system-googletest.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
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* gnu/packages/patches/python-onnx-shared-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/machine-learning.scm (python-onnx)[source]: Use it.
[arguments]: New field.
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* gnu/packages/machine-learning.scm (python-onnx)[source]: Delete
the 'third_party' directory.
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* gnu/packages/machine-learning.scm (python-onnx): Move patch comment to...
* gnu/packages/patches/python-onnx-use-system-googletest.patch: ... here.
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* gnu/packages/machine-learning.scm (python-onnx): Update to 1.9.0.
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* gnu/packages/machine-learning.scm (xnnpack): New variable.
* gnu/packages/patches/xnnpack-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
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Conflicts:
gnu/packages/bioinformatics.scm
gnu/packages/cmake.scm
gnu/packages/curl.scm
gnu/packages/emacs-xyz.scm
gnu/packages/gpodder.scm
gnu/packages/music.scm
gnu/packages/patches/glibc-bootstrap-system.patch
gnu/packages/python-xyz.scm
gnu/packages/shells.scm
gnu/packages/statistics.scm
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* gnu/packages/machine-learning.scm (python-hyperopt): New variable.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
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* gnu/packages/bioinformatics.scm (sailfish)[arguments]: Use
'search-input-file' when looking for *.a and *.so.
* gnu/packages/emulators.scm (dolphin-emu): Likewise.
* gnu/packages/engineering.scm (lepton-eda): Likewise.
(pcb): Likewise.
* gnu/packages/golang.scm (go-1.4): Likewise.
(go-1.14): Likewise.
* gnu/packages/haskell.scm (ghc-7): Likewise.
* gnu/packages/irods.scm (irods): Likewise.
* gnu/packages/language.scm (python2-tegaki-pygtk): Likewise.
* gnu/packages/lisp-xyz.scm (sbcl-lzlib): Likewise.
(sbcl-cl-gobject-introspection): Likewise.
(sbcl-cl-ana): Likewise.
(sbcl-cl-libuv): Likewise.
(sbcl-cl-async): Likewise.
(sbcl-mcclim): Likewise.
(sbcl-zstd): Likewise.
(sbcl-cl-opengl): Likewise.
(sbcl-lev): Likewise.
(sbcl-cl-glfw3): Likewise.
* gnu/packages/machine-learning.scm (tensorflow): Likewise.
* gnu/packages/messaging.scm (utox): Likewise.
* gnu/packages/mpi.scm (java-openmpi): Likewise.
* gnu/packages/music.scm (jack-select): Likewise.
* gnu/packages/pascal.scm (fpc): Likewise.
* gnu/packages/python-crypto.scm (python-libnacl): Likewise.
* gnu/packages/python-xyz.scm (python-cairocffi): Likewise.
(python-pyev): Likewise.
(python-pytidylib): Likewise.
* gnu/packages/radio.scm (unixcw): Likewise.
* gnu/packages/rust.scm (rust-1.32): Likewise.
* gnu/packages/security-token.scm (opensc): Likewise.
(python-pyscard): Likewise.
* gnu/packages/selinux.scm (python-setools): Likewise.
* gnu/packages/spice.scm (libcacard): Likewise.
* gnu/packages/telephony.scm (libtgvoip): Likewise.
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* gnu/packages/bioinformatics.scm (sailfish)[arguments]: Use
'search-input-directory' when searching for Eigen headers.
* gnu/packages/bioinformatics.scm (nanopolish): Likewise.
* gnu/packages/machine-learning.scm (tensorflow): Likewise.
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* gnu/packages/machine-learning.scm (python-cmaes): New variable.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
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