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path: root/gnu/packages/bioinformatics.scm
Commit message (Expand)AuthorAge
* gnu: Use the non-deprecated TeX packages.Ludovic Courtès2021-09-06
* gnu: Replace PYTHONPATH with GUIX_PYTHONPATH.Felix Gruber2021-09-06
* Merge branch 'master' into core-updates-frozenMarius Bakke2021-08-12
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| * gnu: pigx-rnaseq: Update to 0.0.18.Ricardo Wurmus2021-08-11
| * gnu: pigx-sars-cov2-ww: Update to 0.0.3.Ricardo Wurmus2021-08-05
| * gnu: Add r-spectre.Ricardo Wurmus2021-08-03
* | Merge branch 'master' into core-updates-frozenMarius Bakke2021-07-29
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| * gnu: Add seqan 3.Ricardo Wurmus2021-07-26
| * gnu: Add segemehl.Ricardo Wurmus2021-07-26
| * gnu: python-pysam: Make the check phase honor the tests? argument.Efraim Flashner2021-07-22
| * gnu: python-pysam: Update to 0.16.0.1.Efraim Flashner2021-07-22
| * gnu: Add htslib-1.10.Efraim Flashner2021-07-22
| * gnu: python-biopython: Update to 1.73.Efraim Flashner2021-07-22
| * gnu: Add r-battenberg.Lars-Dominik Braun2021-07-21
| * gnu: Add r-ascat.Lars-Dominik Braun2021-07-21
| * gnu: Add nanosv.Lars-Dominik Braun2021-07-21
| * gnu: Add python-pyvcf.Lars-Dominik Braun2021-07-21
| * gnu: checkm: Rename and update to 1.1.3.Lars-Dominik Braun2021-07-21
| * gnu: Add tombo.Lars-Dominik Braun2021-07-21
* | gnu: Use 'search-input-directory' and 'search-input-file' where appropriate.Ludovic Courtès2021-07-24
* | gnu: Use 'search-input-file' when looking for .jar files.Ludovic Courtès2021-07-24
* | gnu: Use 'search-input-file' when looking for executables.Ludovic Courtès2021-07-24
* | gnu: Use 'search-input-file' when looking for *.so and *.a.Ludovic Courtès2021-07-24
* | gnu: Use 'search-input-directory' when looking for C/C++ library headers.Ludovic Courtès2021-07-24
* | gnu: Use 'search-input-directory' for the Eigen header directory.Ludovic Courtès2021-07-24
* | gnu: Use 'search-input-directory' when looking for tzdata.Ludovic Courtès2021-07-24
* | Merge branch 'master' into core-updatesLudovic Courtès2021-07-18
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| * gnu: Add ocaml-sqlite3.Julien Lepiller2021-07-05
| * gnu: bioperl-minimal: Avoid top-level cross-module references.Ludovic Courtès2021-07-01
| * gnu: Do not import (gnu packages commencement).Ludovic Courtès2021-07-01
* | Merge branch 'master' into core-updatesTobias Geerinckx-Rice2021-06-23
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| * gnu: ensembl-vep: Use a source file-name.Efraim Flashner2021-06-22
| * gnu: Add perl-cworld-dekker.Ricardo Wurmus2021-06-22
| * gnu: Add python-iced.Ricardo Wurmus2021-06-21
* | Merge branch 'master' into core-updatesMarius Bakke2021-06-19
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| * gnu: Add python-cgatcore.Ricardo Wurmus2021-06-14
| * gnu: Rename qtbase to qtbase-5.Maxim Cournoyer2021-06-14
| * gnu: pigx-sars-cov2-ww: Update to 0.0.2.Ricardo Wurmus2021-06-08
| * gnu: pigx-bsseq: Update to 0.1.5.Ricardo Wurmus2021-06-08
| * gnu: python-hicmatrix: Update to 15.Mădălin Ionel Patrașcu2021-06-08
| * gnu: python-mappy: Move to (gnu packages bioinformatics).Efraim Flashner2021-06-08
| * gnu: pigx-rnaseq: Update to 0.0.17.Ricardo Wurmus2021-06-08
| * gnu: pigx-rnaseq: Adjust to upgrade of salmon.Ricardo Wurmus2021-06-07
| * gnu: salmon: Update to 1.4.0.Ricardo Wurmus2021-06-07
| * gnu: macs: Update to 2.2.7.1.Ricardo Wurmus2021-06-07
| * gnu: libgff: Update to 2.0.0.Ricardo Wurmus2021-06-07
| * gnu: jellyfish: Update to 2.3.0.Ricardo Wurmus2021-06-07
| * gnu: multiqc: Update to 1.10.1.Ricardo Wurmus2021-06-07
| * gnu: python-hic2cool: Update to 0.8.3.Mădălin Ionel Patrașcu2021-06-07
* | Merge branch 'master' into core-updatesMarius Bakke2021-06-06
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