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* import: gnome: Exclude version numbers that do not start with a digit.Ludovic Courtès2021-03-17
| | | | | | | Fixes a bug whereby NetworkManager would be updated to version "rc2". * guix/import/gnome.scm (latest-gnome-release)[even-minor-version?]: Change catch-all case to return #f when the first part is not a digit.
* scripts: weather: Provide more representative request statistics.Christopher Baines2021-03-17
| | | | | | | | | | Previously, the "seconds per request" and "requests per second" statistics really reported (cache lookups + requests) per second. By looking at the actual number of requests made within lookup-narinfos, a more representative value can be reported. * guix/scripts/weather.scm (let/time): Allow for multiple return values. (report-server-coverage): Alter the reporting of request statistics.
* substitutes: lookup-narinfos: Return the number of requests made.Christopher Baines2021-03-17
| | | | | | | | | As an additional value, in addition to the narinfos. This value is useful in the weather script for reporting how many requests to the substitute server were made. * guix/substitutes.scm (lookup-narinfos): Additionally return the number of requests made.
* scripts: substitute: Tweak error reporting in process-substitution.Christopher Baines2021-03-17
| | | | | | | | | | | | | | | The call-with-connection-error-handling was added in 20c08a8a45d0f137ead7c05e720456b2aea44402, but that error handling was previously inside of open-connection-for-uri/maybe, which is related to (call-)with-cached-connection which was used in process-substitution, but only actually used with call-with-cached-connection when used in fetch-narinfos. There's some handling for similar errors within with-networking, which is used within process-substitution. * guix/scripts/substitute.scm (process-substitution): Remove call-with-connection-error-handling call.
* scripts: substitute: Add back some error handling.Christopher Baines2021-03-17
| | | | | | | | | | | | | | In f50f5751fff4cfc6d5abba9681054569694b7a5c, the way fetch was called within process-substitution was changed. As call-with-cached-connection actually includes important error handling for the opening of a HTTP request, this change removed some error handling. This commit adds that back. Fixes <https://bugs.gnu.org/47157>. * guix/scripts/substitute.scm (call-with-cached-connection): New procedure. (with-cached-connection): New syntax rule. (process-substitution): Retry once for some errors when making HTTP requests to fetch substitutes.
* gnu: scdoc: Cross-compile.Tobias Geerinckx-Rice2021-03-17
| | | | * gnu/packages/man.scm (scdoc)[arguments]: Use CC-FOR-TARGET.
* gnu: scdoc: Don't use unstable tarball.Tobias Geerinckx-Rice2021-03-17
| | | | | | | The autogenerated tarball was modified upstream. * gnu/packages/man.scm (scdoc)[source]: Use GIT-FETCH and GIT-FILE-NAME.
* gnu: libtirpc/hurd: Fix package source.Christopher Baines2021-03-17
| | | | | | | | | | Amend the changes in 1a265842e634656411bc7304c4648273f174f65e to properly access the origin patches from libtirpc. I noticed this as guix weather didn't work for this package. * gnu/packages/onc-rpc.scm (libtirpc/hurd)[source]: Call origin-patches on (package-source libtirpc) rather than the libtirpc package.
* gnu: lua.scm: Sort package module imports alphabetically.Efraim Flashner2021-03-17
| | | | * gnu/packages/lua.scm: Sort package module imports alphabetically.
* gnu: python-pygments: Update to 2.7.4 [fixes CVE-2021-27291].Léo Le Bouter2021-03-17
| | | | | * gnu/packages/python-xyz.scm (python-pygments/fixed): New variable. (python-pygments)[replacement]: Graft.
* gnu: Add emacs-kotlin-mode.Oleg Pykhalov2021-03-17
| | | | * gnu/packages/emacs-xyz.scm (emacs-kotlin-mode): New variable.
* gnu: emacs-marginalia: Update to 0.4.Nicolas Goaziou2021-03-17
| | | | * gnu/packages/emacs-xyz.scm (emacs-marginalia): Update to 0.4.
* gnu: komikku: Update to 0.27.0.Leo Prikler2021-03-17
| | | | | * gnu/packages/gnome.scm (komikku): Update to 0.27.0. [inputs]: Add python-brotli and webkitgtk.
* gnu: Move lolcode to esolangs.Leo Prikler2021-03-17
| | | | | | | * gnu/packages/lolcode.scm (lci): Move from here... * gnu/packages/esolangs.scm (lolcode-lci): ... to here. * gnu/packages/lolcode.scm: Delete file. * gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
* news: Add 'fr' translation.Julien Lepiller2021-03-17
| | | | * etc/news.scm: Add missing French translations.
* gnu: tig: Update to 2.5.3.LibreMiami2021-03-17
| | | | | | | | * gnu/packages/version-control.scm (tig): Update to 2.5.3. Co-authored-by: jgart <jgart@dismail.de> Co-authored-by: donotshake <donotshake:matrix.org> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu-maintenance: Add a timeout on FTP connection establishment.Ludovic Courtès2021-03-17
| | | | | * guix/gnu-maintenance.scm (latest-ftp-release): Pass #:timeout to 'ftp-open'.
* gnu-maintenance: Remove unused parameters of 'latest-ftp-release'.Ludovic Courtès2021-03-17
| | | | | * guix/gnu-maintenance.scm (latest-ftp-release): Remove #:ftp-open, #:ftp-close, and #:keep-file?.
* gnu: hwloc: Add 'release-monitoring-url' property.Ludovic Courtès2021-03-17
| | | | * gnu/packages/mpi.scm (hwloc-1)[properties]: New field.
* gnu-maintenance: Add 'generic-html' updater.Ludovic Courtès2021-03-17
| | | | | | | | | | | This brings total updater coverage, as reported by 'guix refresh --list-updaters', from 78% to 88.3%. Among many other things, it covers freedesktop.org packages. * guix/gnu-maintenance.scm (html-updatable-package?) (latest-html-updatable-release): New procedures. (%generic-html-updater): New variable. * doc/guix.texi (Invoking guix refresh): Document it.
* gnu-maintenance: 'latest-html-release' better computes version number.Ludovic Courtès2021-03-17
| | | | | | | | * guix/gnu-maintenance.scm (latest-html-release): Use 'tarball->version' rather than 'package-name->name+version' to extract the version number. This fixes problems with packages like 'netsurf' and 'libdom' that have "-src" in their tarball name, where "src" would be taken as the new version number.
* gnu-maintenance: 'latest-html-release' can determine signature file name.Ludovic Courtès2021-03-17
| | | | | | | | | | | * guix/gnu-maintenance.scm (latest-html-release): #:file->signature defaults to #f. [file->signature/guess]: New procedure. [url->release]: Use it when FILE->SIGNATURE is #f. Introduce 'links' variable. (url-prefix-rewrite): Check whether URL is true before calling 'string-prefix?'. (latest-savannah-release): Adjust comment about detached signatures.
* gnu-maintenance: 'release-file?' rejects checksum files.Ludovic Courtès2021-03-17
| | | | | * guix/gnu-maintenance.scm (release-file?): Reject ".md5sum", ".sha1sum", and ".sha256sum".
* gnu-maintenance: 'latest-html-release' considers non-relative URLs.Ludovic Courtès2021-03-17
| | | | | * guix/gnu-maintenance.scm (latest-html-release): Allow for URL to be an arbitrary URL rather than a relative URL reference.
* gnu-maintenance: Use (htmlprag) for 'latest-html-release'.Ludovic Courtès2021-03-17
| | | | | | | * guix/gnu-maintenance.scm (html->sxml): Remove. Autoload (htmlprag) instead. * doc/guix.texi (Requirements): Mention 'guix refresh' for the Guile-Lib dependency.
* maint: Check whether Guile-zlib is recent enough.Ludovic Courtès2021-03-17
| | | | | | | This is a followup to a04aef2430645357d7796969d4b6453478ff8a3f. * m4/guix.m4 (GUIX_CHECK_GUILE_ZLIB): New macro. * configure.ac: Use it when checking for Guile-zlib.
* doc: Define the term "profile".Ludovic Courtès2021-03-17
| | | | | | | | Fixes <https://bugs.gnu.org/46803>. Reported by Luis Felipe <luis.felipe.la@protonmail.com>. * doc/guix.texi (Getting Started): Introduce the term "profile". (Invoking guix package): Likewise.
* daemon: Correctly handle '--discover' with no value.Ludovic Courtès2021-03-17
| | | | | | | | | | Previously, we'd get: $ guix-daemon --discover error: basic_string::_M_construct null not valid * nix/nix-daemon/guix-daemon.cc (parse_opt): Change second argument to 'settings.set' to properly handle case where ARG is NULL.
* gnu: gnome-autoar: Update to 0.3.1 [fixes CVE-2021-28650].Léo Le Bouter2021-03-17
| | | | * gnu/packages/gnome.scm (gnome-autoar): Update to 0.3.1.
* gnu: pzstd: Update to 1.4.9 [fixes CVE-2021-24032].Léo Le Bouter2021-03-17
| | | | | | * gnu/packages/compression.scm (pzstd): Use 'package/inherit' over zstd so any graft applied to zstd cascades onto pzstd which is built from the same source.
* gnu: Use PACKAGE/INHERIT in more places.Mark H Weaver2021-03-17
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/algebra.scm (fftwf, fftw-openmpi), gnu/packages/audio.scm (ztoolkit-rsvg), gnu/packages/bioinformatics.scm (python2-dendropy), gnu/packages/boost.scm (boost-with-python2), gnu/packages/check.scm (python2-mock, python2-pytest-mock), gnu/packages/cups.scm (hplip-minimal), gnu/packages/freedesktop.scm (libinput-minimal), gnu/packages/gettext.scm (gnu-gettext), gnu/packages/glib.scm (python2-pygobject), gnu/packages/gnome.scm (gdl-minimal, libsoup-minimal, python2-pyatspi), gnu/packages/groff.scm (groff-minimal), gnu/packages/jami.scm (ffmpeg-jami), gnu/packages/libcanberra.scm (libcanberra/gtk+-2), gnu/packages/lirc.scm (python2-lirc), gnu/packages/llvm.scm (clang-runtime-3.5), gnu/packages/mpi.scm (java-openmpi, openmpi-thread-multiple), gnu/packages/node.scm (libnode), gnu/packages/onc-rpc.scm (libtirpc/hurd), gnu/packages/python-compression.scm (bitshuffle-for-snappy), gnu/packages/python-crypto.scm (python2-pycrypto, python2-cryptography) (python2-cryptography, python2-m2crypto), gnu/packages/python-web.scm (python2-html2text, python2-tornado) (python2-terminado, python2-ndg-httpsclient, python2-websocket-client) (python2-rauth, python2-url, python2-s3transfer), gnu/packages/python-xyz.scm (python2-psutil, python2-serpent) (python2-humanfriendly, python2-empy, python2-parse-type, python2-polib) (python2-jsonschema, python2-pystache, python2-cython, python2-numpydoc) (python2-ipyparallel, python2-traitlets, python2-dbus) (python2-beautifulsoup4, python2-pep517, python2-flake8, python2-llfuse) (python2-tlsh, python-file, python2-notebook, python-jupyter-console-minimal) (python2-contextlib2, python2-promise, python2-anyjson, python2-amqp) (python2-kombu, python2-billiard, python2-celery, python2-whoosh) (python2-jellyfish, python-rope, ptpython-2, python2-binaryornot) (python2-setproctitle, python2-argcomplete, python2-xopen, python2-isort) (python2-radon, python2-rfc6555, python2-activepapers, python2-send2trash) (python2-cloudpickle, python2-reparser), gnu/packages/python.scm (python2-called-python), gnu/packages/qt.scm (python2-sip, python-pyqt-without-qtwebkit, python2-pyqt) (python-qscintilla, python-pyqt+qscintilla), gnu/packages/scanner.scm (sane-backends), gnu/packages/sdl.scm (guile3.0-sdl2), gnu/packages/selinux.scm (checkpolicy, libselinux, libsemanage, secilc) (python-sepolgen, policycoreutils), gnu/packages/serialization.scm (lua5.1-libmpack, lua5.2-libmpack), gnu/packages/simulation.scm (fenics), gnu/packages/statistics.scm (python2-statsmodels), gnu/packages/texinfo.scm (info-reader), gnu/packages/wxwidgets.scm (wxwidgets-gtk2, wxwidgets-gtk2-3.1), gnu/packages/xml.scm (xmlsec-nss), gnu/packages/xorg.scm (uim-gtk, uim-qt), guix/build-system/python.scm (package-with-explicit-python) (strip-python2-variant): Use PACKAGE/INHERIT.
* gnu: gvfs: Add 'lint-hidden-cve' property.Mark H Weaver2021-03-16
| | | | | * gnu/packages/gnome.scm (gvfs)[properties]: New field, marking CVE-2019-12447, CVE-2019-12448, and CVE-2019-12449 as fixed.
* gnu: gnome-shell: Add 'lint-hidden-cve' property.Mark H Weaver2021-03-16
| | | | | * gnu/packages/gnome.scm (gnome-shell)[properties]: New field, marking CVE-2019-3820 as fixed.
* gnu: qemu: Enable reproducible builds.Maxim Cournoyer2021-03-16
| | | | | | | | Fixes <https://issues.guix.gnu.org/47176>. The solution was suggested by bonzini on OFTC's #qemu channel. * gnu/packages/virtualization.scm (qemu)[snippet]: Delete bundled meson copy. [native-inputs]: Add meson-next.
* gnu: Add meson-next.Maxim Cournoyer2021-03-16
| | | | * gnu/packages/build-tools.scm (meson-next): New variable.
* gnu: mpg321: Fix CVE-2019-14247.Kei Kebreau2021-03-16
| | | | | | | | | * gnu/packages/patches/mpg321-CVE-2019-14247.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/mp3.scm (mpg321)[source]: Apply it. Signed-off-by: Léo Le Bouter <lle-bout@zaclys.net> Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: varnish-modules: Update to 0.17.1 [fixes CVE-2021-28543].Léo Le Bouter2021-03-16
| | | | * gnu/packages/web.scm (varnish-modules): Update to 0.17.1.
* news: Add ‘de’ translation.Florian Pelz2021-03-16
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* gnu: tor: Update to 0.4.5.7 [security fixes].Efraim Flashner2021-03-16
| | | | * gnu/packages/tor.scm (tor): Update to 0.4.5.7.
* gnu: snakemake: Add missing inputs.Ricardo Wurmus2021-03-16
| | | | | * gnu/packages/python-xyz.scm (snakemake)[propagated-inputs]: Add python-nbformat, python-pulp, and python-toposort.
* gnu: Add python-toposort.Ricardo Wurmus2021-03-16
| | | | * gnu/packages/python-xyz.scm (python-toposort): New variable.
* gnu: Add python-pulp.Ricardo Wurmus2021-03-16
| | | | * gnu/packages/python-xyz.scm (python-pulp): New variable.
* gnu: Add python-amply.Ricardo Wurmus2021-03-16
| | | | * gnu/packages/python-xyz.scm (python-amply): New variable.
* gnu: emacs-easy-kill: Update to 0.9.4.Nicolas Goaziou2021-03-16
| | | | * gnu/packages/emacs-xyz.scm (emacs-easy-kill): Update to 0.9.4.
* gnu: emacs-leaf: Update to 4.4.0.Nicolas Goaziou2021-03-16
| | | | * gnu/packages/emacs-xyz.scm (emacs-leaf): Update to 4.4.0.
* gnu: python-pikepdf: Update to 2.9.0.Nicolas Goaziou2021-03-16
| | | | * gnu/packages/python-xyz.scm (python-pikepdf): Update to 2.9.0.
* gnu: asymptote: Update to 2.70.Nicolas Goaziou2021-03-16
| | | | * gnu/packages/plotutils.scm (asymptote): Update to 2.70.
* gnu: b4: Fix setup.py version incompatibility.Efraim Flashner2021-03-16
| | | | | | | * gnu/packages/version-control.scm (b4)[source]: Add snippet to not require too specific of a version. Reported-by: Kyle Meyer <kyle@kyleam.com>
* gnu: libmemcached: Disable test suite.Maxim Cournoyer2021-03-16
| | | | | | | | | | | * gnu/packages/databases.scm (libmemcached): Disable test suite. Removing trailing #t. [phases]{fix-configure}: Remove useless group in pattern. {disable-failing-tests}: Remove phase. {build-and-install-html-doc}: Order after the build phase. [home-page]: Please 'guix lint'. Reported-by: Simon Tournier <zimon.toutoune@gmail.com>
* gnu: hisat2: Update to 2.2.1.Ricardo Wurmus2021-03-16
| | | | | | | | | * gnu/packages/bioinformatics.scm (hisat2): Update to 2.2.1. [source]: Fetch from git repository on Github. [arguments]: Add phase to build manual; remove trailing #t from other phases. [native-inputs]: Remove unzip. [home-page]: Update. [inputs]: Add python-wrapper.
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