| Commit message (Collapse) | Author | Age |
... | |
|
|
|
| |
* gnu/packages/cran.scm (r-overlap): New variable.
|
|
|
|
| |
* gnu/packages/cran.scm (r-acdm): New variable.
|
|
|
|
| |
* gnu/packages/cran.scm (r-acd): New variable.
|
|
|
|
| |
* gnu/packages/cran.scm (r-abn): New variable.
|
|
|
|
| |
* gnu/packages/cran.scm (r-rjags): New variable.
|
|
|
|
| |
* gnu/packages/statistics.scm (jags): New variable.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
Update to 3.4.4.
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (r-org-mm-eg-db): Update to 3.7.0.
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (r-org-dm-eg-db): Update to 3.7.0.
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (r-org-ce-eg-db): Update to 3.7.0.
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Update to 3.7.0.
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (r-genomationdata): Update to 1.14.0.
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (r-go-db): Update to 3.7.0.
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (r-genomeinfodbdata): Update to 1.2.0.
|
|
|
|
|
|
|
| |
Fixes <https://bugs.gnu.org/33346>.
* gnu/packages/spice.scm (spice-vdagent)[arguments]: Fix typo in
'patch-spice-vdagent.desktop' phase.
|
|
|
|
| |
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.10-14.
|
|
|
|
| |
* gnu/packages/ssh.scm (libssh)[source]: Use HTTPS URL.
|
|
|
|
|
| |
* gnu/packages/shellutils.scm (direnv)[native-inputs]: Remove go.
[inputs]: Add go-1.9.
|
|
|
|
|
|
|
|
| |
* gnu/packages/patches/poppler-CVE-2018-19149.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (poppler)[replacement]: New field.
(poppler/fixed): New variable.
(poppler-qt4, poppler-qt5): Use package/inherit.
|
|
|
|
| |
* gnu/packages/tls.scm (certbot, python-acme): Update to 0.28.0.
|
|
|
|
| |
* gnu/packages/package-management.scm (guix): Update to f5a2724.
|
|
|
|
|
|
|
|
|
| |
Fixes <https://bugs.gnu.org/33361>.
* guix/store/deduplication.scm (replace-with-link): Call 'set-file-time'
and 'chmod' after 'rename-file'.
* tests/nar.scm ("restore-file-set with directories (signed, valid)"):
New test.
|
|
|
|
|
|
| |
* guix/tests.scm (canonical-file?): New procedure.
* tests/nar.scm ("restore-file-set (signed, valid)"): Check that every
item of FILES matches 'canonical-file?'.
|
|
|
|
| |
* tests/nar.scm: Remove test for 'open-sha256-input-port'.
|
|
|
|
|
|
|
|
|
|
| |
* gnu/services/base.scm (nscd-action-procedure, nscd-actions): New
procedures.
(nscd-shepherd-service): Add 'modules' and 'actions' fields.
* gnu/tests/base.scm (run-basic-test)["nscd invalidate action"]
["nscd invalidate action, wrong table"]: New tests.
* doc/guix.texi (Services): Mention 'herd doc nscd action'.
(Base Services): Document the actions.
|
|
|
|
| |
* gnu/services/mcron.scm (shepherd-schedule-action): Fix typo in comment.
|
|
|
|
|
|
|
| |
* guix/store/database.scm (%default-database-file): New variable.
(path-id): Export.
* guix/nar.scm (finalize-store-file): Use 'with-database' instead of
'with-store', and use 'path-id' instead of 'valid-path?'.
|
|
|
|
|
| |
* gnu/packages/backup.scm (restic)[arguments]: Set "HOME" environment variable
in build phase.
|
|
|
|
| |
* gnu/packages/messaging.scm (c-toxcore)[source]: Fetch from git.
|
|
|
|
|
| |
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 3.20.
* gnu/packages/wine.scm (wine-staging): Update to 3.20.
|
|
|
|
| |
* gnu/packages/php.scm (php): Update to 7.2.12.
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
This leads to ~25% improvements on things like:
guix system build desktop.tmpl --no-grafts -d
* guix/store.scm (<nix-server>)[object-cache]: New field.
* guix/store.scm (open-connection): Initialize it.
(cache-object-mapping, lookup-cached-object, %mcached): New procedures.
(mcached): New macro.
* guix/gexp.scm (lower-object): Use it.
* guix/grafts.scm (grafting?): New procedure.
|
|
|
|
|
|
|
|
|
| |
* guix/tests.scm (test-assertm): New macro.
* tests/gexp.scm (test-assertm): Remove.
* tests/profiles.scm (test-assertm): Remove.
* tests/challenge.scm (%store, test-assertm): Remove.
* tests/debug-link.scm (%store, test-assertm): Remove.
* tests/size.scm (%store, test-assertm): Remove.
|
|
|
|
| |
* gnu/packages/video.scm (youtube-dl): Update to 2018.11.07.
|
|
|
|
| |
* gnu/packages/vim.scm (vifm): Update to 0.10.
|
|
|
|
|
|
| |
* gnu/packages/golang.scm (go-github-com-aarzilli-golua)[arguments]: Fix for go-1.11.
[native-inputs]: Remove lua.
[propagated-inputs]: Add lua.
|
|
|
|
|
|
| |
* gnu/packages/golang.scm (go-github-com-wtolson-go-taglib)[arguments]: Fix tests for go-1.11.
[native-inputs]: Remove pkg-config and taglib.
[propagated-inputs]: Add pkg-config and taglib.
|
|
|
|
| |
* gnu/packages/syncthing.scm (go-gopkg.in-asn1-ber.v1): Fix tests for go-1.11.
|
|
|
|
| |
* gnu/packages/syncthing.scm (go-github-com-audriusbutkevicius-cli): Fix tests for go-1.11.
|
|
|
|
| |
* gnu/packages/syncthing.scm (go-github-com-prometheus-common-expfmt): Fix tests for go-1.11.
|
|
|
|
| |
* guix/build/go-build-system.scm (install): New comment.
|
|
|
|
| |
* gnu/packages/golang.scm (go): Update default to 1.11.
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Fixes a bug whereby running 'guix system init config.scm /mnt' twice
would, on the second run, change timestamps in /mnt/gnu/store from the
Epoch to now. This is because the 'register-path' call would bypass the
'reset-timestamps' phase altogether in that case, as a consequence of
commit bb3b6ccb05550fbfbeb459c68819a752327d6e1e.
Reported by Christopher Baines.
* guix/scripts/system.scm (install): When TARGET/var/guix exists, delete
it. As a side-effect, this ensures that later on, the 'register-path'
call invokes 'reset-timestamps' on all the copied store items.
|
|
|
|
|
|
|
|
|
| |
Fixes <https://bugs.gnu.org/33323>.
Reported by swedebugia <swedebugia@riseup.net>.
* guix/scripts/package.scm (process-query): Call 'leave' when
'find-packages-by-name' returns the empty list.
* tests/guix-package.sh: Test it.
|
|
|
|
|
|
| |
* doc/guix.texi (Porting to a New Platform): Fix typo.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.20.1.
|
|
|
|
| |
* gnu/packages/cran.scm (r-rcmdcheck): Update to 1.3.2.
|
|
|
|
| |
* gnu/packages/cran.scm (r-ggpubr): Update to 0.1.9.
|
|
|
|
| |
* gnu/packages/statistics.scm (r-dplyr): Update to 0.7.8.
|
|
|
|
| |
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.200.4.0.
|