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* | gnu: pigx-scrnaseq: Update to 1.1.8.Ricardo Wurmus2022-04-05
| | | | | | | | | | | | | | | | * gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 1.1.8. [patches]: Remove. [native-inputs]: Remove. * gnu/packages/patches/pigx-scrnaseq-no-citeproc.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
* | news: Add 'de' translation.Florian Pelz2022-04-05
| | | | | | | | * etc/news.scm: Add German translation of 'guix shell --export-manifest' entry.
* | gnu: r-with-tests: Update to 4.1.3.Ricardo Wurmus2022-04-05
| | | | | | | | * gnu/packages/statistics.scm (r-with-tests): Update to 4.1.3.
* | gnu: git: Update to 2.35.1.Greg Hogan2022-04-05
| | | | | | | | | | | | * gnu/packages/version-control.scm (git): Update to 2.35.1. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* | Revert "gnu: git: Update to 2.35.1."Maxim Cournoyer2022-04-05
|/ | | | | | | This reverts commit 223a3d7f7fdb6af9c4c090785cab15d38680e887, as it triggered thousands of rebuilds due to inadvertently touching git-minimal/fixed. Reported-by: Christopher Baines <mail@cbaines.net>
* gnu: eyeD3: Update to 0.9.6.Leo Famulari2022-04-04
| | | | | * gnu/packages/mp3.scm (eyed3): Update to 0.9.6. [propagated-inputs]: Add python-deprecation and python-filetype.
* news: Add entry about 'guix shell --export-manifest'.Ludovic Courtès2022-04-04
| | | | * etc/news.scm: Add entry.
* shell: Add '--export-manifest'.Ludovic Courtès2022-04-04
| | | | | | | | | | | | * guix/scripts/shell.scm (show-help, %options): Add '--export-manifest'. (manifest-entry-version-prefix, manifest->code*) (export-manifest): New procedures. (guix-shell): Honor '--export-manifest'. * tests/guix-shell-export-manifest.sh: New file. * Makefile.am (SH_TESTS): Add it. * doc/guix.texi (Invoking guix shell): Document '--export-manifest'. (Invoking guix environment): Link to it. (Invoking guix pack): Likewise.
* environment: Export 'load-manifest'.Ludovic Courtès2022-04-04
| | | | | * guix/scripts/environment.scm (load-manifest): New procedure. (options/resolve-packages): Use it.
* packages: Add 'package-unique-version-prefix'.Ludovic Courtès2022-04-04
| | | | | | | * gnu/packages.scm (package-unique-version-prefix): New procedure. * guix/scripts/package.scm (manifest-entry-version-prefix): Use it. * tests/packages.scm ("package-unique-version-prefix, gcc@8") ("package-unique-version-prefix, grep"): New tests.
* gnu: Add parole.Feng Shu2022-04-04
| | | | | | * gnu/packages/xfce.scm (parole): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* services: Add 'log-cleanup' service to '%base-services' for build logs.Ludovic Courtès2022-04-04
| | | | | | * gnu/services/base.scm (%base-services): Add 'log-cleanup-service-type' instance. * doc/guix.texi (Log Rotation): Add example and mention '%base-services'.
* services: Add 'log-cleanup-service-type'.Ludovic Courtès2022-04-04
| | | | | | | | * gnu/services/admin.scm (<log-cleanup-configuration>): New record type. (log-cleanup-program, log-cleanup-mcron-jobs): New procedures. (log-cleanup-service-type): New variable. * doc/guix.texi (Log Rotation): Document it.
* gnu: mediainfo: Update to 22.03.kiasoc52022-04-04
| | | | | | * gnu/packages/video.scm (mediainfo): Update to 22.03. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: libmediainfo: Update to 22.03.kiasoc52022-04-04
| | | | | | * gnu/packages/video.scm (libmediainfo): Update to 22.03. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: gtkmm: Update to 4.6.1.Zhu Zihao2022-04-04
| | | | | | | | | * gnu/packages/gtk.scm (gtkmm): Update to 4.6.1. [propagated-inputs]: Remove atkmm because it's no longer needed. * gnu/packages/gtk.scm (pangomm): Update to 2.50.0. [propagated-inputs]: Replace 'pango' with 'pango-next'. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add fcitx5-gtk4.Zhu Zihao2022-04-04
| | | | | | * gnu/packages/fcitx5.scm (fcitx5-gtk4): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: gtk: Update to 4.6.1.Zhu Zihao2022-04-04
| | | | | | | | | | | | | | | | | | | * gnu/local.mk (dist_patch_DATA): Remove gtk-introspection-test.patch. * gnu/packages/patches/gtk-introspection-test.patch: Remove. * gnu/packages/gtk.scm (gtk): Update to 4.6.1. [source]: Remove stale patch. [arguments]<phases>: Add 'patch-rst2man' phase, correct the binary name of rst2man to 'rst2man.py' [inputs]: Add libjpeg-turbo, libpng, libtiff. [native-inputs]: Add python-docutils. [propagated-inputs]: Use pango-next. * gnu/packages/fcitx5.scm (fcitx5-gtk)[arguments]: Disable GTK4 build. <configure-flags>: Add "-DENABLE_GTK_IM_MODULE=OFF". <phases>: In phase "patch-install-prefix", Remove GTK4 code. [inputs]: Remove package gtk. [outputs]: Remove output "gtk4". Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: pango 1.50: Add version 1.50.4.Zhu Zihao2022-04-04
| | | | | | * gnu/packages/gtk.scm(pango-next): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: freebayes: Fix test suite.Efraim Flashner2022-04-04
| | | | * gnu/packages/bioinformatics.scm (freebayes)[native-inputs]: Add python.
* gnu: smithwaterman: Use new style for phases.Efraim Flashner2022-04-04
| | | | | * gnu/packages/bioinformatics.scm (smithwaterman)[arguments]: Use list of G-Expressions.
* gnu: smithwaterman: Fix cross-compiling.Efraim Flashner2022-04-04
| | | | | | | * gnu/packages/bioinformatics.scm (smithwaterman)[arguments]: Add make-flag to use cxx-for-target. Adjust custom 'patch-source and 'build-dynamic phases to use cross toolchain binaries when cross compiling. Remove trailing #t from phases.
* gnu: marble-qt: Update to 21.12.3.Michael Rohleder2022-04-04
| | | | | | | * gnu/packages/kde.scm (marble-qt): Update to 21.12.3. [inputs]: Add qtwebchannel, qtwebengine. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: Add r-zoeppritz.Mădălin Ionel Patrașcu2022-04-04
| | | | | | * gnu/packages/cran.scm (r-zoeppritz): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add python-bip39.Attila Lendvai2022-04-04
| | | | | | * gnu/packages/python-xyz.scm (python-bip39): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: parallel: Update to 20220322.Efraim Flashner2022-04-04
| | | | * gnu/packages/parallel.scm (parallel): Update to 20220322.
* gnu: stgit: Update to 1.5.Greg Hogan2022-04-04
| | | | | | * gnu/packages/version-control.scm (stgit): Update to 1.5. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: git: Update to 2.35.1.Maxim Cournoyer2022-04-04
| | | | | | | | * gnu/packages/version-control.scm (git): Update to 2.35.1. [phases]: Delete trailing #t. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: emacs-elpy: Update to 1746e70.jgart2022-04-04
| | | | | | * gnu/packages/emacs-xyz.scm (emacs-elpy): Update to 1746e70. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: emacs-poet-theme: Update to 16eb694.jgart2022-04-04
| | | | | | * gnu/packages/emacs-xyz.scm (emacs-poet-theme): Update to 16eb694. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: emacs-gnugo: Patch 'gnugo-program' variable.Maxim Cournoyer2022-04-04
| | | | | | | | * gnu/packages/emacs-xyz.scm (emacs-gnugo) [phases]{configure-default-gnugo-xpms-variable}: Rename to... {configure}: ... this. Patch the 'gnugo-program' variable. [inputs]: Add gnugo. [description]: Describe basic usage entry points.
* build: emacs-utils: Add a (as-display) subform to `emacs-substitute-variables'.Maxim Cournoyer2022-04-04
| | | | | | | | * guix/build/emacs-utils.scm (as-display): New variable. (replacement-helper): New syntax helper. (emacs-substitute-sexps): Use it and update doc. (emacs-substitute-variables): Add an optional 'modifier' datum to the replacement specification, and document it.
* import: pypi: Use new style for the conditional unzip input.Maxim Cournoyer2022-04-04
| | | | * guix/import/pypi.scm (make-pypi-sexp)<unzip>: Use new style.
* gnu: svt-av1: Update to 0.9.1.Leo Famulari2022-04-03
| | | | * gnu/packages/video.scm (svt-av1): Update to 0.9.1.
* gnu: libaom: Update to 3.3.0.Leo Famulari2022-04-03
| | | | * gnu/packages/video.scm (libaom): Update to 3.3.0.
* gnu: linux-libre 4.14: Update to 4.14.275.Leo Famulari2022-04-03
| | | | | * gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.275. (linux-libre-4.14-pristine-source): Update hash.
* gnu: xterm: Make big cursors work.Danny Milosavljevic2022-04-03
| | | | | | | * gnu/packages/patches/xterm-370-explicit-xcursor.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (xterm)[source]: Add it. [arguments]<#:configure-flags>: Add "-lXcursor".
* gnu: cpufrequtils: Set file-name for source.Efraim Flashner2022-04-03
| | | | * gnu/packages/linux.scm (cpufrequtils)[source]: Add file-name field.
* gnu: rust-combine-4: Update to 4.6.3.Efraim Flashner2022-04-03
| | | | | | * gnu/packages/crates-io.scm (rust-combine-4): Update to 4.6.3. [arguments]<cargo-inputs>: Add rust-futures-core-0.3, rust-tokio-util-0.6. Remove rust-futures-util-0.3.
* gnu: rust-shlex-1: Update to 1.1.0.Efraim Flashner2022-04-03
| | | | * gnu/packages/crates-io.scm (rust-shlex-1): Update to 1.1.0.
* gnu: rust-hyphenation-0.8: Update to 0.8.4.Efraim Flashner2022-04-03
| | | | | | | | | | * gnu/packages/crates-io.scm (rust-hyphenation-0.8): Update to 0.8.4. [arguments]: Don't skip build. <cargo-inputs>: Remove duplicate entries. <cargo-development-inputs>: New field. Add rust-criterion-0.3, rust-once-cell-1, rust-quickcheck-1, rust-unicode-segmentation-1. (rust-hyphenation-commons-0.8): Update to 0.8.4. [arguments]: Don't skip build.
* gnu: rust-fsv-0.4: Update to 0.4.7.Efraim Flashner2022-04-03
| | | | | | | * gnu/packages/crates-io.scm (rust-fsv-0.4): Update to 0.4.7. [arguments]: Don't skip build. <cargo-development-inputs>: New field. Add rust-doc-comment-0.3, rust-fnv-1, rust-memmap-0.7, rust-quickcheck-0.9, rust-rand-0.7.
* gnu: rust-criterion-0.3: Update to 0.3.5.Efraim Flashner2022-04-03
| | | | | | * gnu/packages/crates-io.scm (rust-criterion-0.3): Update to 0.3.5. [arguments]<cargo-inputs>: Replace rust-approx-0.4 with 0.5, rust-quickcheck-0.9 with 1.
* gnu: rust-criterion-plot-0.4: Update to 0.4.4.Efraim Flashner2022-04-03
| | | | | * gnu/packages/crates-io.scm (rust-criterion-plot-0.4): Update to 0.4.4. [arguments]<cargo-inputs>: Replace rust-itertools-0.9 with 0.10.
* gnu: Add rust-os-str-bytes-6.Efraim Flashner2022-04-03
| | | | | * gnu/packages/crates-io.scm (rust-os-str-bytes-6): New variable. (rust-os-str-bytes-4): Inherit from rust-os-str-bytes-6.
* gnu: Add rust-print-bytes-0.5.Efraim Flashner2022-04-03
| | | | | * gnu/packages/crates-io.scm (rust-print-bytes-0.5): New variable. (rust-print-bytes-0.4): Inherit from rust-print-bytes-0.5.
* gnu: Add rust-os-str-bytes-4.Efraim Flashner2022-04-03
| | | | | * gnu/packages/crates-io.scm (rust-os-str-bytes-4): New variable. (rust-os-str-bytes-2): Inherit from rust-os-str-bytes-4.
* gnu: Add rust-print-bytes-0.4.Efraim Flashner2022-04-03
| | | | * gnu/packages/crates-io.scm (rust-print-bytes-0.4): New variable.
* gnu: Add rust-smawk-0.3.Efraim Flashner2022-04-03
| | | | * gnu/packages/crates-io.scm (rust-smawk-0.3): New variable.
* gnu: Add rust-ndarray-0.14.Efraim Flashner2022-04-03
| | | | | | * gnu/packages/crates-io.scm (rust-ndarray-0.14): New variable. * gnu/packages/patches/rust-ndarray-0.14-remove-blas-src.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
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