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* gnu: Add python-scikit-allel.base-for-series-11717base-for-series-11716base-for-series-11715base-for-series-11714Efraim Flashner2022-03-18
| | | | * gnu/packages/python-science.scm (python-scikit-allel): New variable.
* gnu: Add cl-purgatory.cage2022-03-18
| | | | | | | * gnu/packages/lisp-xyz.scm (cl-purgatory, ecl-purgatory, sbcl-purgatory): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: vim: Update to 8.2.4564.Efraim Flashner2022-03-18
| | | | | | * gnu/packages/vim.scm (vim): Update to 8.2.4564. [arguments]: Adjust custom 'patch-absolute-paths phase to upstream changes.
* gnu: gnome-shell-extension-customize-ibus: Update to 82.Mathieu Othacehe2022-03-18
| | | | * gnu/packages/gnome-xyz.scm (gnome-shell-extension-customize-ibus): Update to 82.
* gnu: capstone: Update to 4.0.2.Olivier Dion2022-03-18
| | | | | | | | | * gnu/packages/engineering.scm (capstone): Update to 4.0.2. [source]: Fix indentation and git URL. [phases]: Strip trailing #t. [home]: Update URL. Co-authored-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: Add sysbench.Maxim Cournoyer2022-03-18
| | | | * gnu/packages/benchmark.scm (sysbench): New variable.
* gnu: Add ck.Maxim Cournoyer2022-03-18
| | | | * gnu/packages/c.scm (ck): New variable.
* utils: Add ar-for-target and ld-for-target procedures.Maxim Cournoyer2022-03-18
| | | | * guix/utils.scm (ar-for-target, ld-for-target): New procedures.
* gnu: postgresql-14: Update to 14.2.Maxim Cournoyer2022-03-18
| | | | * gnu/packages/databases.scm (postgresql-14): Update to 14.2.
* gnu: postgresql-11: Update to 11.15.Brice Waegeneire2022-03-18
| | | | | | * gnu/packages/databases.scm (postgresql-11): Update to 11.15. Co-authored-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: postgresql-10: Update to 10.20.Brice Waegeneire2022-03-18
| | | | | | * gnu/packages/databases.scm (postgresql-10): Update to 10.20. Co-authored-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: postgresql-9.6: Remove EOL package.Maxim Cournoyer2022-03-18
| | | | * gnu/packages/databases.scm (postgresql-9.6): Delete variable.
* gnu: MPD: Update to 0.23.6.Leo Famulari2022-03-18
| | | | * gnu/packages/mpd.scm (mpd): Update to 0.23.6.
* gnu: linux-libre: Enable UTF-8 normalization and casefolding.Tobias Geerinckx-Rice2022-03-13
| | | | | | | | | | | | | | | | | | | | | | | | | | Without this it is apparently impossible to mount file systems with the feature, which apparently some distributions do by default now. podiki[m]> I have an sdcard that was formatted with ext4 casefold [by Arch Linux], cannot be mounted * gnu/packages/aux-files/linux-libre/5.10-arm.conf, gnu/packages/aux-files/linux-libre/5.10-arm64.conf, gnu/packages/aux-files/linux-libre/5.10-i686.conf, gnu/packages/aux-files/linux-libre/5.10-x86_64.conf, gnu/packages/aux-files/linux-libre/5.15-arm.conf, gnu/packages/aux-files/linux-libre/5.15-arm64.conf, gnu/packages/aux-files/linux-libre/5.15-i686.conf, gnu/packages/aux-files/linux-libre/5.15-x86_64.conf, gnu/packages/aux-files/linux-libre/5.16-arm.conf, gnu/packages/aux-files/linux-libre/5.16-arm64.conf, gnu/packages/aux-files/linux-libre/5.16-i686.conf, gnu/packages/aux-files/linux-libre/5.16-x86_64.conf, gnu/packages/aux-files/linux-libre/5.4-arm.conf, gnu/packages/aux-files/linux-libre/5.4-arm64.conf, gnu/packages/aux-files/linux-libre/5.4-i686.conf, gnu/packages/aux-files/linux-libre/5.4-x86_64.conf: Set CONFIG_UNICODE=y.
* gnu: rtl8812au-aircrack-ng-linux-module: Update to 5.6.4.2-7.37e27f9.J. Sims via Guix-patches via2022-03-17
| | | | | | | | | | This fixes issues with Linux 5.17 and adds optimizations for 5.15: https://github.com/aircrack-ng/rtl8812au/pull/942 https://github.com/aircrack-ng/rtl8812au/commit/2f52f84096ae09d36012d455d29b73e6cb37f740 * gnu/packages/linux.scm (rtl8812au-aircrack-ng-linux-module): Update to 5.6.4.2-7.37e27f9.
* gnu: linux-libre 4.9: Update to 4.9.307.Leo Famulari2022-03-17
| | | | | * gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.307. (linux-libre-4.9-pristine-source): Update hash.
* gnu: linux-libre 4.14: Update to 4.14.272.Leo Famulari2022-03-17
| | | | | * gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.272. (linux-libre-4.14-pristine-source): Update hash.
* gnu: linux-libre 4.19: Update to 4.19.235.Leo Famulari2022-03-17
| | | | | * gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.235. (linux-libre-4.19-pristine-source): Update hash.
* gnu: linux-libre 5.4: Update to 5.4.185.Leo Famulari2022-03-17
| | | | | * gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.185. (linux-libre-5.4-pristine-source): Update hash.
* gnu: linux-libre 5.10: Update to 5.10.106.Leo Famulari2022-03-17
| | | | | * gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.106. (linux-libre-5.10-pristine-source): Update hash.
* gnu: linux-libre 5.15: Update to 5.15.29.Leo Famulari2022-03-17
| | | | | * gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.29. (linux-libre-5.15-pristine-source): Update hash.
* gnu: linux-libre: Update to 5.16.15.Leo Famulari2022-03-17
| | | | | * gnu/packages/linux.scm (linux-libre-5.16-version): Update to 5.16.15. (linux-libre-5.16-pristine-source): Update hash.
* Revert "services: nfs: Define rpcbind-shepherd-service at the top level."Maxim Cournoyer2022-03-17
| | | | | | This reverts commit 0a9e82b43080275a2755624f3208287056dc9f95, which didn't end up fixing anything. The problem was elsewhere; namely, using 'operating-system-services' instead of 'operating-system-user-services'.
* services: nfs: Define rpcbind-shepherd-service at the top level.Maxim Cournoyer2022-03-17
| | | | | | | | | | | | | | | | | | | | Attempting to use the 'nfs-service-type' as part of a computed operating-system definition, the following exception would be thrown: ice-9/boot-9.scm:1685:16: In procedure raise-exception: ERROR: 1. &ambiguous-target-service-error: service: #<<service> type: #<service-type rpcbind 7f7529853780> value: #<<rpcbind-configuration> rpcbind: #<package rpcbind@1.2.6 gnu/packages/onc-rpc.scm:87 7f75389e78f0> warm-start?: #t>> target-type: #<service-type shepherd-root 7f7529396080> 2. &message: "more than one target service of type 'shepherd-root'" The problem was that the rpcbind shepherd-service object was dynamically instantiated every time the rpcbind-service-type would be called, causing multiple objects in some situations, resulting in the above condition. * gnu/services/nfs.scm (rpcbind-service-type): Refactor and adjust in a way to extract... (rpcbind-shepherd-service): ... this new procedure.
* gnu: guile-git: Skip test on powerpc-linux.base-for-series-11704base-for-series-11702base-for-series-11699Efraim Flashner2022-03-17
| | | | | * gnu/packages/guile.scm (guile-git)[arguments]: When building on powerpc-linux add a phase to skip one test.
* gnu: Add r-mbess.Ricardo Wurmus2022-03-17
| | | | * gnu/packages/cran.scm (r-mbess): New variable.
* gnu: python-jupyter-sphinx: Run tests.Efraim Flashner2022-03-17
| | | | | | | * gnu/packages/sphinx.scm (python-jupyter-sphinx)[source]: Download using git-fetch. [arguments]: Use custom 'check phase. [native-inputs]: Add python-pytest.
* gnu: python-scipy: Adjust phases.Efraim Flashner2022-03-17
| | | | | * gnu/packages/python-science.scm (python-scipy)[arguments]: Replace 'check with custom 'check phase.
* gnu: sicp: Update to 20180718-2.bda03f7.jgart2022-03-17
| | | | | | | | | * gnu/packages/scheme.scm (sicp): Update to 20180718-2.bda03f7. [version]: Use git-version function. [source]: Use git-file-name function. [arguments]: Remove trailing `#t`. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: cl-3bmd: Update to 0.0.0-3.4e08d82.jgart2022-03-17
| | | | | | | | | * gnu/packages/lisp-xyz.scm (sbcl-3bmd): Update to 0.0.0-3.4e08d82. [native-inputs]: Add sbcl-fiasco. [inputs]: Add python, python-pygments, and use newer inputs guix style. [arguments]: Add 'fix-python3-path' phase. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: cl-envy: Update to 26a7faa.jgart2022-03-17
| | | | | | | | * gnu/packages/lisp-xyz.scm (sbcl-envy): Update to 26a7faa. [native-inputs]: Uncomment test inputs and use new style. [arguments]: Add 'asd-systems' parameter, Remove 'fix-tests' phase. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: Add r-ggtern.Ricardo Wurmus2022-03-17
| | | | * gnu/packages/cran.scm (r-ggtern): New variable.
* gnu: cross-base: Don't specify mingw --with-newlibCarl Dong2022-03-16
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Previous to this commit, we added a --with-newlib configure flag to cross-gcc when cross-newlib?, but cross-newlib? is true only when target-mingw?. It turns out that specifying --with-newlib disables the GLIBCXX_CROSSCONFIG check, which is used to detect _GLIBCXX_HAVE__WFOPEN, which is required in C++17 std::filesystem for mingw-w64 systems. Additional context: In gnu/packages/embedded.scm, --with-newlib is specified explicitly when we're actually using newlib, which seems like the correct way of handling it. Situation in other distros: - Debian's gcc-mingw-w64 doesn't specify --with-newlib - Fedora's mingw64-gcc-c++ explicitly specifies --without-newlib Chesterton's fence: Chatting with janneke, who originally added this mechanism, reveals that this flag is not only no longer required, but also that removing it doesn't break his guile-mingw builds. See IRC logs of #guix for 2022-02-15. * gnu/packages/cross-base.scm (cross-gcc-arguments): Don't check for and specify --with-newlib. (cross-libc): Check for mingw and use mingw-w64 directly. (cross-newlib?): Remove, unexport. (native-libc): Remove.
* gnu: knot: Update to 3.1.6.Tobias Geerinckx-Rice2022-03-13
| | | | * gnu/packages/dns.scm (knot): Update to 3.1.6.
* gnu: expat: Update to 2.4.7.Leo Famulari2022-03-16
| | | | | | | | | This fixes some regressions in 2.4.5 and 2.4.6: https://www.xml.com/news/2022-02-expat-246/ https://www.xml.com/news/2022-03-expat-247/ * gnu/packages/xml.scm (expat/fixed): Update to 2.4.7.
* gnu: OpenSSL 3: Update to 3.0.2 [fixes CVE-2022-0778].Leo Famulari2022-03-16
| | | | | | | | For more information about this vulnerability: https://www.openssl.org/news/secadv/20220315.txt * gnu/packages/tls.scm (openssl-3.0): Update to 3.0.2.
* gnu: OpenSSL: Update to 1.1.1n [fixes CVE-2022-0778].Leo Famulari2022-03-16
| | | | | | | | For more information about this vulnerability: https://www.openssl.org/news/secadv/20220315.txt * gnu/packages/tls.scm (openssl/fixed): Update to 1.1.1n.
* gnu: isc-dhcp: Update bundled BIND to 9.11.37.Tobias Geerinckx-Rice2022-03-13
| | | | | * gnu/packages/admin.scm (isc-dhcp)[inputs]: Update bind-source-tarball to 9.11.37.
* gnu: bind: Update to 9.16.27 [fixes CVE-2022-0396].Tobias Geerinckx-Rice2022-03-13
| | | | * gnu/packages/dns.scm (isc-bind): Update to 9.16.27.
* gnu: cdrtools: Don't return #t from snippet.Tobias Geerinckx-Rice2022-03-13
| | | | * gnu/packages/cdrom.scm (cdrtools)[source]: Don't return #t from snippet.
* gnu: cdrtools: Use G-expressions.Tobias Geerinckx-Rice2022-03-13
| | | | | * gnu/packages/cdrom.scm (cdrtools)[arguments]: Rewrite as G-expressions. Don't return #t from phases.
* gnu: cdrtools: Link dynamically.Tobias Geerinckx-Rice2022-03-13
| | | | | * gnu/packages/cdrom.scm (cdrtools)[arguments]: Add "LINKMODE=dynamic" to the #:configure-flags.
* gnu: cdrtools: Prepare for cross-compilation.Tobias Geerinckx-Rice2022-03-13
| | | | * gnu/packages/cdrom.scm (cdrtools)[arguments]: Use CC-FOR-TARGET.
* gnu: ruby-stackprof: Adjust skipped test on powerpc-linux.Efraim Flashner2022-03-16
| | | | | * gnu/packages/ruby.scm (ruby-stackprof)[arguments]: On powerpc-linux adjust the 'skip-dubious-test phase.
* gnu: i2pd: Update to 2.41.0.Andrew Tropin2022-03-16
| | | | | | | * gnu/packages/i2p.scm (i2pd): Update to 2.41.0. [arguments]: Remove trailing slash to match all libi2pd entries. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: cl-mito: Update to 47ba486.jgart2022-03-16
| | | | | | * gnu/packages/lisp-xyz.scm (sbcl-mito): Update to 47ba486. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: opencpn: Update to 5.6.0.Guillaume Le Vaillant2022-03-16
| | | | | * gnu/packages/geo.scm (opencpn): Update to 5.6.0. [inputs]: Add alsa-utils, eudev, jasper, libjpeg-turbo and libusb.
* gnu: Add tessen.base-for-series-11693base-for-series-11688base-for-series-11687base-for-series-11686Tanguy Le Carrour2022-03-16
| | | | | | * gnu/packages/password-utils.scm (tessen): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: matterbridge: update to 1.24.0Denis 'GNUtoo' Carikli2022-03-16
| | | | | | * gnu/packages/messaging.scm (matterbridge): Update to 1.24.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add python-mathlibtools.Pradana AUMARS2022-03-16
| | | | | | * gnu/packages/lean.scm (python-mathlibtools): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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