| Commit message (Collapse) | Author | Age |
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* guix/import/utils.scm (beautify-description): Handle additional common
initial sentence fragments in descriptions.
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* gnu/packages/statistics.scm (r-tidyr): Update to 1.0.0.
[propagated-inputs]: Add r-ellipsis, r-lifecycle, and r-vctrs.
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* gnu/packages/graph.scm (r-diffusionmap): Update to 1.2.0.
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* gnu/packages/cran.scm (r-seqinr): Update to 3.6-1.
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* gnu/packages/cran.scm (r-lifecycle): New variable.
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* gnu/packages/cran.scm (r-huge): Update to 1.3.3.
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* gnu/packages/cran.scm (r-tidytree): Update to 0.2.7.
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* gnu/packages/cran.scm (r-activity): Update to 1.3.
[propagated-inputs]: Add r-insol.
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* gnu/packages/cran.scm (r-sjplot): Update to 2.7.1.
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* gnu/packages/cran.scm (r-sjstats): Update to 0.17.6.
[propagated-inputs]: Add r-parameters.
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* gnu/packages/cran.scm (r-emmeans): Update to 1.4.1.
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* gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.1.
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* gnu/packages/cran.scm (r-circlize): Update to 0.4.8.
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* gnu/packages/cran.scm (r-httpuv): Update to 1.5.2.
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* gnu/packages/cran.scm (r-insol): New variable.
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* gnu/packages/cran.scm (r-rgdal): New variable.
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* gnu/packages/cran.scm (r-parameters): New variable.
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This fixes bug#37069.
* gnu/packages/games.scm (gnujump)[arguments]: Add custom
'create-desktop-entry phase to install a desktop file.
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* gnu/packages/patches/tipp10-fix-compiling.patch: Remove changes to
hardcode executable path.
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This addresses a 'guix lint' warning.
* gnu/packages/maths.scm (gmsh)[home-page]: Update to avoid URL
redirection.
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* gnu/packages/guile-xyz.scm (mcron): Update to 1.1.2.
[arguments]: Remove custom 'set-timezone phase.
[native-inputs]: Add autoconf, automake, help2man, texinfo.
[inputs]: Remove ed, which.
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* gnu/packages/shellutils.scm: Sort module inputs alphabetically.
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* gnu/packages/shellutils.scm (zsh-autosuggestions): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/ruby.scm (ruby-rspec-wait): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* guix/build/cargo-build-system.scm (touch): Remove it.
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This is a follow-up to f58b2f38e4dfdbb8473fb2816d44fae6ad9cbc79.
* guix/build/cargo-build-system.scm (configure): Use bespoke
'strip-store-file-name' function.
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* gnu/packages/shellutils.scm (sh-z): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/xfce.scm (thunar): Update to 1.8.9.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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Until now, OpenBLAS would use at most the N threads, where N is the
number of cores that happened to be available on the build
machine (typically N=8).
* gnu/packages/maths.scm (openblas/fixed-num-threads): New variable.
(openblas)[replacement]: New field.
(openblas-ilp64): Use 'package/inherit'.
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* gnu/packages/python-xyz.scm (python-matplotlib-documentation)[native-inputs]:
Add python-sphinx-copybutton.
(python2-matplotlib-documentation)[native-inputs]: Remove
python-sphinx-copybutton.
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* gnu/packages/sphinx.scm (python-sphinx-copybutton): New variable.
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* gnu/packages/python-xyz.scm (python-matplotlib): Update to 3.1.1.
[native-inputs]: Remove python-nose; add python-pytest and unzip; add
jquery-ui.
[arguments]: Add build phases "fix-and-disable-failing-tests" and
"install-jquery-ui", and move the "check" phase after the "install" phase;
use the default backend in setup.cfg.
(python2-matplotlib): Keep at version 2.2.3.
(python-matplotlib-documentation)[arguments]: Remove "check" phase.
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* gnu/packages/cran.scm (r-assertr): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/emacs-xyz.scm (emacs-interactive-align): Update to 0.4.2.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/emacs-xyz.scm (emacs-doom-themes): New variable.
Co-authored-by: Brett Gilio <brettg@posteo.net>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/build/linux-container.scm (call-with-container): Add
#:process-spawned-hook and honor it.
* gnu/system/linux-container.scm (container-script)[script]:
Define 'explain' and pass it as #:process-spawned-hook'.
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This is a followup to a9162155975a131afa1e6a44262afbb7af91f7fd.
* gnu/services/base.scm (%base-services): Fix "/usr/bin/env" target.
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* gnu/system/linux-container.scm (containerized-operating-system)[useless-services]:
Add more services to the list when SHARED-NETWORK? is true.
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This allows containers created by "guix environment -CN" or by
"guix system container -N" to talk to the host nscd.
* gnu/system/file-systems.scm (%network-file-mappings): Add
"/var/run/nscd".
* gnu/build/shepherd.scm (default-mounts)[nscd-socket]: Remove.
* gnu/system/linux-container.scm (container-script)[nscd-run-directory]
[nscd-mapping, nscd-os, nscd-specs]: Remove.
[script]: Filter out from SPECS bind-mounts where the device does not
exist.
* guix/scripts/environment.scm (launch-environment/container)
[optional-mapping->fs]: New procedure.
[mappings]: Remove %NETWORK-FILE-MAPPINGS.
[file-systems]: Add %NETWORK-FILE-MAPPINGS here, filtered through
'optional-mapping->fs'.
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* guix/build/cargo-build-system.scm (configure): When copying the
sources into the vendor-dir strip off the hash before the package name.
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* gnu/packages/maths.scm (gmsh)[source]: Switch to GIT-FETCH.
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* gnu/packages/python-check.scm (python-pytest-virtualenv)
[phases]{patch-virtualenv-executable}: New phase.
[propagated-inputs]: Move python-virtualenv from here...
[inputs]: ...to here.
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This fixes the build of 'python-pytest-shutil', amongst others.
* gnu/packages/python-xyz.scm (python-pathpy)[propagated-inputs]: Add
python-importlib-metadata.
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* gnu/packages/gnome.scm (gfbgraph)[source]: Hard-code NAME.
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* gnu/packages/vpn.scm (openconnect): Update to 8.05.
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* gnu/packages/maths.scm (hypre)[native-inputs]: Replace texlive-generic-xypic
and texlive-fonts-xypic with texlive-xypic; add texlive-cm to the
texlive-union.
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Reported by numerobis on the #guix IRC channel.
* gnu/packages/tex.scm (texlive-xypic)[source]: Install "tex/generic/xypic"
files.
[arguments]: Remove #:tex-directory.
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* gnu/packages/python-xyz.scm (python-language-server): Update to 0.28.3-1.c3cab77.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
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* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce6)[arguments]:
Remove field.
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* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce6)[source]: Use
BIOCONDUCTOR-URI.
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