| Commit message (Collapse) | Author | Age |
|
|
|
| |
* gnu/packages/bioinformatics.scm (python2-twobitreader): Remove variable.
|
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (python-bbknn)[arguments]: Add phase
'do-not-fail-to-find-sklearn, which prevents the 'sanity-check phase from
failing.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (python-bbknn)[propagated-inputs]: Add
python-scikit-learn.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (velvet)[native-inputs]: Add
texlive-fonts-ec.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (velvet)[arguments]: Remove trailing #T from
build phases.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (python-bwapy)[source]: Remove all .o files
in a snippet.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (metabat)[arguments]: Remove trailing #T
from build phases.
|
|
|
|
| |
* gnu/packages/maths.scm (clapack)[arguments]: Set CFLAGS.
|
|
|
|
|
| |
* gnu/packages/maths.scm (clapack)[arguments]: Remove trailing #T from build
phases.
|
|
|
|
|
|
|
| |
This is a follow-up to commit 7e6ee16d498f48b7bb74fefe5d3d67c62b5baa9d.
* gnu/packages/java.scm (tla2tools)[arguments]: Remove remaining reference to
%output.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (kraken2)[arguments]: Remove reference to
%outputs by using a gexp.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (methyldackel)[arguments]: Remove reference
to %outputs by using a gexp.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (phast)[arguments]: Remove reference to
%outputs by using a gexp.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (libsbml)[arguments]: Remove references to
%build-inputs by using a gexp.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (ataqv)[arguments]: Remove references to
%outputs and %build-inputs by using a gexp.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (adapterremoval)[arguments]: Remove
reference to %outputs by using a gexp.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (bbmap)[arguments]: Remove reference to
%build-inputs by using a gexp.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (intervaltree)[arguments]: Remove reference
to %outputs by using a gexp.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (biobambam2)[arguments]: Remove reference to
%build-inputs by using a gexp.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (sjcount)[arguments]: Remove reference to
%build-inputs by using a gexp.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (sjcount)[arguments]: Remove trailing #T
from build phases.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (dropseq-tools)[arguments]: Remove reference
to %build-inputs by using a gexp.
|
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (dropseq-tools)[arguments]: Remove
trailing #T from build phases...
[source]: ...and from the snippet.
|
|
|
|
| |
* gnu/packages/tbb.scm (tbb): Update to 2021.4.0.
|
|
|
|
|
|
|
|
|
|
| |
Commit cb72f9a773e0931ee3758c851d96007ded034e4c changed the semantics of
SITE-PACKAGES, but did not adjust all callers.
* gnu/packages/bioinformatics.scm (python-pyvcf)[arguments]: Adjust for
missing trailing slash.
* gnu/packages/maths.scm (nomad-optimizer)[arguments]: Likewise.
* gnu/packages/patchutils.scm (patchwork)[arguments]: Likewise.
|
|
|
|
|
| |
* gnu/packages/bioinformatics.scm (python-pyvcf)[arguments]: Add phase to
patch sample script.
|
|
|
|
| |
* gnu/packages/monitoring.scm (python-whisper): Update to 1.1.8.
|
|
|
|
|
| |
* gnu/packages/mail.scm (python-mailman-hyperkitty): Update to 1.2.0.
[source](patches): Remove.
|
|
|
|
|
|
|
|
| |
* gnu/packages/mail.scm (python-hyperkitty): Update to 1.3.5.
[arguments]: Add pythonpath in test invokation.
[propagated-inputs]: Add PYTHON-MISTUNE-NEXT. Change from PYTHON-DJANGO-2.2
to PYTHON-DJANGO.
[native-inputs]: Add PYTHON-LXML.
|
|
|
|
| |
* gnu/packages/python-xyz.scm (python-mistune-next): New variable.
|
|
|
|
|
| |
* gnu/packages/django.scm (python-django-haystack): Update to 3.1.1.
[arguments]: Adjust substitution.
|
|
|
|
|
| |
* gnu/packages/databases.scm (python-alembic): Update to 1.7.5.
[propagated-inputs]: Remove PYTHON-IMPORTLIB-RESOURCES.
|
|
|
|
|
|
|
| |
This is a follow-up to commit 1ed567c8721ec2810fdb70f1c6fc8396a705d503.
* gnu/packages/virtualization.scm (ganeti)[arguments]: Adjust wrap phase to
include Ganetis own site-packages on $GUIX_PYTHONPATH.
|
|
|
|
|
| |
* gnu/packages/python-web.scm (python-webassets)[arguments]: Add
substitution.
|
|
|
|
| |
* gnu/packages/mail.scm (python-django-mailman3): Update to 1.3.7.
|
|
|
|
| |
* gnu/packages/mail.scm (python-mailmanclient): Update to 3.3.3.
|
|
|
|
|
|
| |
* gnu/packages/django.scm (python-django-url-filter)[arguments]: Move
substitution to after the unpack phase, so that it does not end up in the egg
info.
|
|
|
|
|
| |
* gnu/packages/django.scm (python-django-netfields)[propagated-inputs]: Add
PYTHON-PSYCOPG2.
|
|
|
|
|
| |
* gnu/packages/django.scm (python-django-logging-json)[arguments]: Add
#:phases.
|
|
|
|
|
| |
* gnu/packages/django.scm (python-django-appconf): Invoke django-admin with
custom pythonpath.
|
|
|
|
|
| |
* gnu/packages/django.scm (python-django-pipeline): Provide pythonpath to
django-admin.
|
|
|
|
|
|
|
| |
This is a follow-up to commit 283d5ac97f2f7663b788bd2fc3b9a27a3d82c7d5.
* gnu/packages/django.scm (python-django-sortedm2m): Invoke django-admin with
pythonpath and test settings.
|
|
|
|
| |
* gnu/packages/django.scm (python-django-contact-form): Update to 1.9.
|
|
|
|
| |
* gnu/packages/django.scm (python-django-jinja): Update to 2.9.1.
|
|
|
|
|
| |
* gnu/packages/django.scm (python-django-haystack)[arguments]: Delete one
phase. While at it, remove trailing #t's.
|
|
|
|
| |
* gnu/packages/databases.scm (python-fakeredis): Update to 1.7.0.
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
This reverts commit d7922f488b658b1adb5aff09f04a9bed0221aee1. Mainly to
placate the new 'sanity-check' phase, and because --with-input and friends
makes it easy to override.
* gnu/packages/django.scm (python-django-extensions,
python-django-simple-math-captcha, python-django-taggit,
python-easy-thumbnails, python-django-haystack, python-django-allauth,
python-django-debug-toolbar, python-django-debug-toolbar-alchemy,
python-django-assets, python-django-jinja, python-django-picklefield,
python-django-bulk-update, python-django-contact-form,
python-django-contrib-comments, python-django-pipeline, python-django-redis,
python-django-rq, python-django-q, python-django-sortedm2m,
python-django-appconf, python-django-statici18n, python-djangorestframework,
python-django-sekizai, python-django-crispy-forms,
python-django-override-storage, python-django-auth-ldap,
python-django-logging-json, python-django-netfields,
python-django-url-filter)[propagated-inputs]: Add PYTHON-DJANGO.
[native-inputs]: Remove it.
|
|
|
|
|
|
|
|
| |
* gnu/packages/gnome.scm (evolution) [phase adjust-webkitgtk-version]: Remove
it.
[inputs]: Depend on webkitgtk-with-libsoup2 instead of webkitgtk.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
|
|
|
|
|
| |
* gnu/packages/java.scm (tla2tools)[arguments]: Bind OUTPUTS in build phase
'install to remove reference to %output.
|
|
|
|
|
| |
* gnu/packages/java.scm (java-log4j-core)[arguments]: Remove reference to
%outputs by using a gexp.
|