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* doc: Fix typo and use @acronym for RAS.Tobias Geerinckx-Rice2021-05-04
| | | | * doc/guix.texi (Linux Services): Fix typo and use @acronym for RAS.
* gnu: rasdaemon: Edit synopsis & description.Tobias Geerinckx-Rice2021-05-04
| | | | * gnu/packages/linux.scm (rasdaemon)[description]: Fix typo and edit.
* gnu: java-javaparser: Upgrade os.name to ‘Guix’.Tobias Geerinckx-Rice2021-05-04
| | | | * gnu/packages/java.scm (java-javaparser)[arguments]: Drop ‘SD’.
* tests: go: Fix typos in test descriptions.Tobias Geerinckx-Rice2021-05-04
| | | | * tests/go.scm: Fix ‘embeded’ typos.
* doc: Fix typos.Tobias Geerinckx-Rice2021-05-04
| | | | | * doc/contributing.texi (Translating Guix): Fix ‘developpers’ and ‘superseeded’ typos. Use @var mark-up where appropriate.
* gnu: go-gopkg-in-go-playground-assert-v1: Fix typo in description.Tobias Geerinckx-Rice2021-05-04
| | | | | * gnu/packages/golang.scm (go-gopkg-in-go-playground-assert-v1) [description]: Fix typo.
* gnu: Add r-naturalsort.Roel Janssen2021-05-04
| | | | * gnu/packages/cran.scm (r-naturalsort): New variable.
* gnu: Exim: Update to 4.94.2 [security fixes].Leo Famulari2021-05-04
| | | | | | | | | | | Fixes CVE-2020-{27216,28007,28008,28009,28010,28011,28012,28013,28014,28015, 28016,28017,28018,28019,28020,28021,28022,28023,28024,28025,28026}. See the upstream security advisory for more information: https://exim.org/static/doc/security/CVE-2020-qualys/21nails.txt * gnu/packages/mail.scm (exim): Update to 4.94.2.
* gnu: s6-linux-init: Update to 1.0.6.3.Tobias Geerinckx-Rice2021-05-04
| | | | * gnu/packages/skarnet.scm (s6-linux-init): Update to 1.0.6.3.
* gnu: ethtool: Update to 5.12.Tobias Geerinckx-Rice2021-05-04
| | | | * gnu/packages/networking.scm (ethtool): Update to 5.12.
* gnu: gthumb: Update to 3.10.3.Tobias Geerinckx-Rice2021-05-04
| | | | * gnu/packages/gnome.scm (gthumb): Update to 3.10.3.
* gnu: libhandy: Update to 1.2.2.Tobias Geerinckx-Rice2021-05-04
| | | | * gnu/packages/gnome.scm (libhandy): Update to 1.2.2.
* gnu: busybox: Update to 1.33.1.Tobias Geerinckx-Rice2021-05-04
| | | | | | | * gnu/packages/busybox.scm (busybox): Update to 1.33.1. [source]: Remove upstreamed patch. * gnu/packages/patches/busybox-CVE-2021-28831.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
* gnu: indi: Stop returning #t from phases.Tobias Geerinckx-Rice2021-05-04
| | | | * gnu/packages/astronomy.scm (indi)[arguments]: Remove #t phase return values.
* gnu: indi: Respect #:tests?.Tobias Geerinckx-Rice2021-05-04
| | | | | * gnu/packages/astronomy.scm (indi)[arguments]: Respect #:tests? in the 'check phase.
* gnu: indi: Check slightly more functionally.Tobias Geerinckx-Rice2021-05-04
| | | | | * gnu/packages/astronomy.scm (indi)[arguments]: Substitute WITH-DIRECTORY-EXCURSION for double CHDIR.
* gnu: indi: Update to 1.9.0.Tobias Geerinckx-Rice2021-05-04
| | | | * gnu/packages/astronomy.scm (indi): Update to 1.9.0.
* gnu: bcachefs-tools: Prepare for cross-compilation.Tobias Geerinckx-Rice2021-05-04
| | | | | * gnu/packages/file-systems.scm (bcachefs-tools)[arguments]: Use CC-FOR-TARGET and PKG-CONFIG-FOR-TARGET.
* gnu: bcachefs-tools: Update to 0.1-6.a14d39d.Tobias Geerinckx-Rice2021-05-04
| | | | * gnu/packages/file-systems.scm (bcachefs-tools): Update to 0.1-6.a14d39d.
* file-systems: Rewrite comment.Tobias Geerinckx-Rice2021-05-04
| | | | | * gnu/build/file-systems.scm (read-bcachefs-superblock): Make comment less damned negative.
* file-systems: Handle abnormal ‘bcachefs fsck’ exits.Tobias Geerinckx-Rice2021-05-04
| | | | * gnu/build/file-systems.scm (check-bcachefs-file-system): Handle a STATUS:EXIT-VAL of #F.
* gnu: bitcoin-core@0.21: Update to 0.21.1.Tobias Geerinckx-Rice2021-05-04
| | | | * gnu/packages/finance.scm (bitcoin-core-0.21): Update to 0.21.1.
* gnu: Add r-guitar.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/bioconductor.scm (r-guitar): New variable.
* gnu: python-nbconvert: Simplify build phase.Ricardo Wurmus2021-05-04
| | | | | * gnu/packages/python-xyz.scm (python-nbconvert)[arguments]: Simplify build phase "fix-paths-and-tests" by using WHICH; remove final boolean and reindent.
* gnu: python-nbconvert: Use modular texlive packages.Ricardo Wurmus2021-05-04
| | | | | * gnu/packages/python-xyz.scm (python-nbconvert)[inputs]: Remove texlive. [native-inputs]: Add texlive-union.
* gnu: Add texlive-eurosym.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/tex.scm (texlive-eurosym): New variable.
* gnu: Add texlive-tcolorbox.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/tex.scm (texlive-tcolorbox): New variable.
* gnu: Add texlive-adjustbox.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/tex.scm (texlive-adjustbox): New variable.
* gnu: Add texlive-collectbox.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/tex.scm (texlive-collectbox): New variable.
* gnu: Add texlive-storebox.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/tex.scm (texlive-storebox): New variable.
* gnu: Add texlive-ifoddpage.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/tex.scm (texlive-ifoddpage): New variable.
* gnu: Add texlive-titling.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/tex.scm (texlive-titling): New variable.
* gnu: sbcl-trivial-backtrace: Move lift to native-inputs.Guillaume Le Vaillant2021-05-04
| | | | | * gnu/packages/lisp-xyz.scm (sbcl-trivial-backtrace)[inputs]: Move lift to... [native-inputs]: ... here.
* gnu: sbcl-trivial-backtrace: Update to 1.1.0-1.6eb65bdSharlatan Hellseher2021-05-04
| | | | | | | * gnu/packages/lisp-xyz.scm (sbcl-trivial-backtrace): Update to 1.1.0-1.6eb65bd. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: sbcl-static-dispatch: Update to 0.5.Sharlatan Hellseher2021-05-04
| | | | | | | | * gnu/packages/lisp-xyz.scm (sbcl-static-dispatch): Update to 0.5. [version]: Use annotated tag of the latest release in upstream. [native-inputs]: Remove prove, add fiveam. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: sbcl-cl-environments: Update to 0.4.Sharlatan Hellseher2021-05-04
| | | | | | | | * gnu/package/lisp-xyz.scm (sbcl-cl-environments): Update to 0.4. [version]: Use annotated tag instead of direct commit, there are upstream releases available now. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* etc: Break long lines in commit messages.Ricardo Wurmus2021-05-04
| | | | | * etc/committer.scm.in (break-string): New procedure. (change-commit-message): Use it.
* gnu: r-summarizedexperiment: Move to (gnu packages bioconductor).Ricardo Wurmus2021-05-04
| | | | | * gnu/packages/bioinformatics.scm (r-summarizedexperiment): Move variable from here... * gnu/packages/bioconductor.scm (r-summarizedexperiment): ...to here.
* gnu: r-mixomics: Update to 6.14.1.Ricardo Wurmus2021-05-04
| | | | | * gnu/packages/bioconductor.scm (r-mixomics): Update to 6.14.1. [propagated-inputs]: Add r-biocparallel.
* gnu: r-catalyst: Update to 1.14.1.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/bioconductor.scm (r-catalyst): Update to 1.14.1.
* gnu: r-scran: Update to 1.18.7.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/bioconductor.scm (r-scran): Update to 1.18.7.
* gnu: r-biocpkgtools: Update to 1.8.2.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.8.2.
* gnu: r-experimenthub: Update to 1.16.1.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/bioconductor.scm (r-experimenthub): Update to 1.16.1.
* gnu: r-bioassayr: Update to 1.28.3.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.28.3.
* gnu: r-universalmotif: Update to 1.8.5.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.8.5.
* gnu: r-icobra: Update to 1.18.1.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/bioconductor.scm (r-icobra): Update to 1.18.1.
* gnu: r-interactionset: Update to 1.18.1.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/bioconductor.scm (r-interactionset): Update to 1.18.1.
* gnu: r-systempiper: Update to 1.24.6.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/bioconductor.scm (r-systempiper): Update to 1.24.6.
* gnu: r-genomeinfodb: Update to 1.26.7.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.26.7.
* gnu: r-biocgenerics: Update to 0.36.1.Ricardo Wurmus2021-05-04
| | | | * gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.36.1.
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