| Commit message (Collapse) | Author | Age |
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* gnu/packages/python-check.scm (python-pytest-rerunfailures): New variable.
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* gnu/packages/machine-learning.scm (mcl)[arguments]: Set CFLAGS.
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* gnu/packages/python-xyz.scm (python-cytoolz): Update to 0.11.2.
[source]: Add snippet.
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* gnu/packages/bioinformatics.scm (hisat): Update to 0.1.6.
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* gnu/packages/bioinformatics.scm (hisat)[arguments]: Remove trailing #T from
build phase.
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* gnu/packages/bioinformatics.scm (hisat)[arguments]: Remove curly quotes.
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* gnu/packages/bioinformatics.scm (crossmap): Update to 0.6.1.
[source]: Add snippet to remove generated files.
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* gnu/packages/bioinformatics.scm (python2-bx-python): Delete variable.
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* gnu/packages/bioinformatics.scm (python-bx-python): Update to 0.8.12.
[propagated-inputs]: Remove python-six.
[arguments]: Remove. Tests are still not run, though.
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Upstream has disappeared and it depends on Python 2, which is no longer
supported.
* gnu/packages/bioinformatics.scm (pbtranscript-tofu): Remove variable.
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* gnu/packages/bioinformatics.scm (python-pyfit-sne): Update to 1.2.1.
[arguments]: Disable tests explicitly.
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* gnu/packages/music.scm (helm)[origin]: Add patch.
* gnu/packages/patches/helm-fix-gcc-9-build.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
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This is a follow-up to commit db5646d957895944007c1bb44fcd998ea392f168, et.al.
* gnu/packages/patchutils.scm (patchwork)[arguments]: Adapt one more
site-packages call.
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* gnu/packages/bioinformatics.scm (f-seq)[arguments]: Use new name of
commons-cli JAR.
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* gnu/packages/bioinformatics.scm (f-seq)[arguments]: Remove trailing #T from
build phase.
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* gnu/packages/bioinformatics.scm (f-seq)[source]: Simplify snippet.
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* gnu/packages/virtualization.scm (osinfo-db-next)[source]: Fix URI.
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* gnu/packages/python-xyz.scm (python-kivy)[arguments]: Add 'set-home'
phase.
[inputs]: Add PYTHON-DOCUTILS, PYTHON-KIVY-GARDEN, and PYTHON-PYGMENTS.
[synopsis, description]: Tweak.
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* gnu/packages/python-xyz.scm (python-kivy-garden): New variable.
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* gnu/packages/password-utils.scm (fpm2)[arguments]: Add #:configure-flags.
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* gnu/packages/xnee.scm (xnee)[arguments]: New field.
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Obtained by running "guix style --input-simplification=always" and by
using 'modify-inputs' instead of list primitives.
* gnu/packages/gnome.scm (libsoup-minimal, libsoup-minimal-2, libsoup):
Simplify inputs.
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Obtained by running "guix style --input-simplification=always".
* gnu/packages/gnome.scm (librsvg, librsvg-2.40): Simplify inputs.
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Obtained by running:
guix style --input-simplification=always gtk+ gtk+@2
* gnu/packages/gtk.scm (gtk+-2, gtk+): Simplify inputs.
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* gnu/packages/gtk.scm (gtk+-2)[propagated-inputs]: Use
'librsvg-for-system' unconditionally.
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* gnu/packages/gnome.scm (libsoup-minimal)[native-inputs]: Remove PHP.
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This brings back SVG support on non-x86_64 platforms.
* gnu/packages/gtk.scm (gtk+)[inputs]: Use 'librsvg-for-system'
unconditionally.
[arguments]: In 'disable-failing-tests' phase, remove conditional
substitutions aimed for non-x86_64 targets lacking librsvg support.
* gnu/packages/gnome.scm (libhandy)[arguments]: Likewise, remove
'skip-test-that-requires-svg' phase.
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* gnu/packages/emacs.scm (emacs)[inputs]: Use 'librsvg-for-system'
unconditionally.
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* gnu/packages/openbox.scm (openbox)[inputs]: Use 'librsvg-for-system'
unconditionally.
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* gnu/packages/mate.scm (engrampa)[inputs]: Replace LIBRSVG by
LIBRSVG-FOR-SYSTEM.
(libmatekbd)[inputs]: Likewise.
(mate-panel)[inputs]: Likewise.
(mate-screensaver)[inputs]: Likewise.
(mate-utils)[inputs]: Likewise.
(mate-control-center)[inputs]: Likewise.
(eom)[inputs]: Likewise, and remove duplicate
[license]: Remove unnecessary list.
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This avoids conflicts where, say, gtk+ would pull pango@1.44 whereas
mate-control-center would additionally pull pango@1.42 via librsvg@2.40
on i686-linux.
* gnu/packages/gnome.scm (librsvg-2.40)[arguments]: In
'remove-failing-tests' phase, remove two additional tests.
[inputs]: Change PANGO-1.42 to PANGO.
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When TeX Live was updated to version 2021 the ‘lualatex’ format started
being generated with the LuaHBTeX engine, but the ‘lualatex’ command still
uses the LuaTeX engine. This causes the command to fail:
user@popigai:~$ lualatex hello.tex
This is LuaTeX, Version 1.13.0 (TeX Live 2021/GNU Guix)
restricted system commands enabled.
---! lualatex.fmt was written by luahbtex
(Fatal format file error; I'm stymied)user@popigai:~$
The correct way to fix this problem would be either to change texlive-bin
to make ‘lualatex’ use the LuaHBTeX engine, or to change texlive-latex-base
to generate ‘lualatex.fmt’ with LuaTeX. Both options would rebuild large
parts of the world.
Ricardo Wurmus suggested creating a new package to provide ‘lualatex.fmt’
for LuaTeX as a workaround. This is what this package does.
Fixes https://issues.guix.gnu.org/51252.
* gnu/packages/tex.scm (texlive-latex-luatex): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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Reported by Vivien Kraus.
* gnu/packages/gnome.scm (gtranslator)[source]: Change
'version-major+minor' to 'version-major'.
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* gnu/packages/linux.scm (libnftnl/fixed): New variable.
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* gnu/packages/django.scm (python-django-netfields): Update to 1.2.4.
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* gnu/packages/django.scm (python-django): Update to 3.2.9.
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* guix/import/pypi.scm (<distribution>): Fix funny typo.
(latest-release): When the distribution has a cryptographic signature, pass it
along to UPSTREAM-SOURCE.
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* gnu/packages/cluster.scm (drbd-utils): Update to 9.19.1.
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* gnu/packages/emacs-xyz.scm (emacs-peg): Update to 0.10.3.
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* gnu/packages/astronomy.scm: (imppg): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/image-viewers.scm (pqiv): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/python-xyz.scm (pudb): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/web-browsers.scm (leo)[source]: Use `git-version' instead of
crafting version string. Also fix indentation.
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* gnu/packages/web-browsers.scm (leo): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/bioinformatics.scm (minimap2): Update to 2.23.
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* gnu/packages/guile-xyz.scm (guile-ini): New variable.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
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* gnu/package/messaging.scm (libphonenumber): New variable
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/guile-xyz.scm (guile-smc): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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The incorrect 'properties' value was introduced in
3649c56a5f23501a5bb3418dc6047b71d494f0fa.
* gnu/packages/ocaml.scm (ocaml4.07-ppx-let)[properties]: Turn into an
alist.
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