| Commit message (Collapse) | Author | Age |
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* gnu/packages/java.scm (java-log4j-core)[arguments]: Remove reference to
%outputs by using a gexp.
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* gnu/packages/java.scm (java-log4j-api)[arguments]: Remove reference to
%outputs by using a gexp.
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* gnu/packages/java.scm (java-native-access)[native-inputs]: Add gcc-7 to fix
the build.
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* gnu/packages/java.scm (java-commons-math3)[arguments]: Remove trailing #T
from build phase.
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* gnu/packages/bioinformatics.scm (salmon)[arguments]: Use a gexp to remove
reference to %build-inputs.
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* gnu/packages/gnome.scm (libhandy)[arguments]: Add
'skip-test-that-requires-svg' phase on non-x86_64.
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* gnu/packages/gnome.scm (gtranslator): Update to 40.0.
[inputs]: Add LIBHANDY.
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* gnu/packages/gnome.scm (gtranslator)[inputs]: Replace LIBSOUP with
LIBSOUP-MINIMAL-2.
[arguments]: Pass #:meson.
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* gnu/packages/gnome.scm (libgda)[source]: Add snippet.
[arguments]: Pass "--enable-system-sqlite".
[inputs]: Add SQLITE.
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* gnu/packages/java.scm (java-commons-math3)[arguments]: Use a gexp
to remove references to %build-inputs.
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* gnu/packages/java.scm (java-commons-collections4)[arguments]: Use a gexp
to remove references to %build-inputs.
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* gnu/packages/java.scm (java-commons-exec-1.1)[arguments]: Use a gexp
to remove references to %build-inputs.
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* gnu/packages/java.scm (java-commons-exec)[arguments]: Use a gexp to
remove references to %build-inputs.
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* gnu/packages/maven-parent-pom.scm (maven-components-parent-pom-22)
[arguments]: Use a gexp to remove references to %build-inputs.
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* gnu/packages/maven-parent-pom.scm (java-sonatype-oss-parent-pom-9)
[arguments]: Use a gexp to remove references to %build-inputs.
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* gnu/packages/bioinformatics.scm (sailfish)[arguments]: Use a gexp to remove
references to %build-inputs.
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* gnu/packages/bioinformatics.scm (sailfish)[source]: Remove trailing #T from
snippet.
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* gnu/packages/bioinformatics.scm (piranha)[arguments]: Use gexp to remove
references to %build-inputs.
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* gnu/packages/bioinformatics.scm (piranha)[arguments]: Remove trailing #T
from build phases.
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* gnu/packages/bioinformatics.scm (emboss)[arguments]: Use gexp to remove
reference to %build-inputs.
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* gnu/packages/bioinformatics.scm (vcftools)[arguments]: Use gexp to remove
references to %outputs.
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* gnu/packages/bioinformatics.scm (seqan-1)[arguments]: Use a gexp to remove
references to %build-inputs and %outputs.
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* gnu/packages/bioinformatics.scm (seqan-2)[arguments]: Use a gexp to remove
references to %build-inputs and %outputs.
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* gnu/packages/bioinformatics.scm (sra-tools)[arguments]: Use a gexp instead
of referencing %build-inputs.
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* gnu/packages/bioinformatics.scm (preseq)[arguments]: Replace references to
%outputs and %build-inputs by using a gexp.
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* gnu/packages/bioinformatics.scm (preseq)[source]: Simplify snippet.
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* gnu/packages/julia-xyz.scm (julia-forwarddiff)[arguments]<#:tests?>:
Conditionally disable tests.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia-xyz (julia-geometrybasics)[arguments]<#:phases>:
Conditionally replace the incorrect type in test suite.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia-xyz.scm (julia-structarrays)[arguments]<#:phases>:
Conditionally replace the incorrect type in the test suite.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia-xyz.scm (julia-mutablearithmetics)[arguments]<#:phases>:
Conditionally disable the failing test.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia-xyz.scm (julia-woodburymatrices)[arguments]<#:phases>:
Conditionally disable the failing test.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia-xyz.scm (julia-intervalsets)[arguments]<#:phases>:
Conditionally disable the failing test.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia-xyz (julia-reversediff)[arguments]<#:tests?>:
Conditionally disable tests.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia-xyz.scm (julia-interpolations)[arguments]<#:tests?>:
Conditionally disable tests.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia-xyz.scm (julia-arrayinterface)[arguments]<#:tests?>:
Conditionally disable tests.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia-xyz.scm (julia-mappedarrays)[arguments]<#:phases>:
Conditionally replace the incorrect type in test suite.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia-xyz.scm (julia-blockarrays)[arguments]<#:phases>:
Conditionally replace the incorrect type in test suite.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia-xyz.scm (julia-lazyarrays)[arguments]<#:phases>:
Conditionally replace the incorrect type in test suite.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia-xyz.scm (julia-configurations)[arguments]<#:phases>:
Conditionally replace the incorrect type in test suite.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia-xyz (julia-finitedifferences)[arguments]<#:phases>:
Conditionnally disable the failing test.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia-xyz.scm (julia-benchmarktools)[arguments]<#:phases>:
Conditionnally disable the failing tests.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia-xyz.scm (julia-datastructures)[arguments]<#:phases>:
Conditionnally disable the failing test.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia.scm (libunwind)[origin]<patches>: Add patch.
* gnu/packages/patches/libunwind-julia-fix-GCC10-fno-common.patch: New file.
* gnu/local/mk (dist_patch_DATA): Register it.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/bioinformatics.scm (plink-ng)[arguments]: Replace 'check phase
to run tests; do not disable tests via arguments.
[native-inputs]: Add diffutils, plink, and python.
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* gnu/packages/bioinformatics.scm (plink-ng)[arguments]: Remove reference to
%outputs by using a gexp.
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* gnu/packages/bioinformatics.scm (plink)[arguments]: Use a gexp to replace
reference to %build-inputs.
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* gnu/packages/bioinformatics.scm (plink)[arguments]: Remove trailing #T from
build phase.
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* gnu/packages/bioinformatics.scm (rsem): Update to 1.3.3.
[arguments]: Build with gnu++11 standard; patch sources for compatibility.
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* gnu/packages/bioinformatics.scm (rsem)[arguments]: Remove trailing #T from
build phases.
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* gnu/packages/bioinformatics.scm (rsem)[arguments]: Use a gexp.
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