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* gnu: cl-croatoan: Update to 0.0.1-4.cf87513.cage2021-12-01
| | | | | | * gnu/packages/lisp-xyz.scm (sbcl-croatoan): Update to 0.0.1-4.cf87513. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: Add julia-millboard.jgart2021-12-01
| | | | | | * gnu/packages/julia-xyz.scm (julia-millboard): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: Add julia-jive.jgart2021-12-01
| | | | | | * gnu/packages/julia-xyz.scm (julia-jive): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: Add julia-softglobalscope.jgart2021-12-01
| | | | | | * gnu/packages/julay-xyz.scm (julia-softglobalscope): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: Add dynaconf.Giacomo Leidi2021-12-01
| | | | | | | | * gnu/packages/python-xyz.scm (dynaconf): New variable. * gnu/packages/patches/dynaconf-Unvendor-dependencies.patch: New file. * local.mk (dist_patch_DATA): Register it. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: Add python-dotenv-0.13.0.Giacomo Leidi2021-12-01
| | | | | | * gnu/packages/python-xyz.scm (python-dotenv-0.13.0): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: python-dotenv: Run test suite.Efraim Flashner2021-12-01
| | | | | * gnu/packages/python-xyz.scm (python-dotenv)[arguments]: Add custom 'check phase.
* gnu: Add python-dotenv.Giacomo Leidi2021-12-01
| | | | | | * gnu/packages/python-xyz.scm (python-dotenv): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: python2-numpydoc: Update to 0.9.1.Ricardo Wurmus2021-12-01
| | | | | * gnu/packages/python-xyz.scm (python2-numpydoc): Update to 0.9.1; do not inherit from Python 3 variant.
* gnu: python-numpydoc: Update to 1.1.0.Ricardo Wurmus2021-12-01
| | | | | | | * gnu/packages/python-xyz.scm (python-numpydoc): Update to 1.1.0. [arguments]: Override 'check phase to run tests. [native-inputs]: Remove python-nose; add python-matplotlib, python-pytest, and python-pytest-cov.
* gnu: Add python-mwparserfromhell.Alice BRENON2021-12-01
| | | | | | * gnu/packages/python-web.scm (python-mwparserfromhell): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: ruby-mocha: Update to 1.13.0.Efraim Flashner2021-12-01
| | | | | * gnu/packages/ruby.scm (ruby-mocha): Update to 1.13.0. [home-page]: Update to new location.
* gnu: cl-yxorp: Update to 0.4.Charles2021-12-01
| | | | | | * gnu/packages/lisp-xyz.scm (sbcl-yxorp): Update to 0.4. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: Add cl-liballegro.Sharlatan Hellseher2021-12-01
| | | | | | | * gnu/packages/lisp-xyz.scm: (sbcl-cl-liballegro, ecl-cl-liballegro, cl-liballegro): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu: Add r-phyloseq.Nicolas Vallet2021-12-01
| | | | | | * gnu/packages/cran.scm (r-phyloseq): New variable Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add r-fmcsr.Ricardo Wurmus2021-11-30
| | | | * gnu/packages/bioconductor.scm (r-fmcsr): New variable.
* gnu: python-cloudscraper: Update to 1.2.58.Ricardo Wurmus2021-11-30
| | | | | | | | * gnu/packages/python-web.scm (python-cloudscraper): Update to 1.2.58. [source]: Do not delete as many files in snippet; fetch sources via git. [arguments]: Add build phase 'fix-references; replace 'check phase. [inputs]: Add node. [propagated-inputs]: Add python-js2py, python-polling2, and python-responses.
* gnu: Add python-polling2.Ricardo Wurmus2021-11-30
| | | | * gnu/packages/python-xyz.scm (python-polling2): New variable.
* gnu: Add python-js2py.Ricardo Wurmus2021-11-30
| | | | * gnu/packages/python-web.scm (python-js2py): New variable.
* gnu: Add python-pyjsparser.Ricardo Wurmus2021-11-30
| | | | * gnu/packages/python-web.scm (python-pyjsparser): New variable.
* gnu: Add r-seuratdata.Ricardo Wurmus2021-11-30
| | | | * gnu/packages/cran.scm (r-seuratdata): New variable.
* gnu: guile-wisp: Update to 1.0.6.Ricardo Wurmus2021-11-30
| | | | * gnu/packages/guile-xyz.scm (guile-wisp): Update to 1.0.6.
* gnu: guile-wisp: Remove trailing #T.Ricardo Wurmus2021-11-30
| | | | * gnu/packages/guile-xyz.scm (guile-wisp)[arguments]: Remove trailing #T.
* gnu: emacs-fountain-mode: Update to 3.6.0.Nicolas Goaziou2021-11-30
| | | | * gnu/packages/emacs-xyz.scm (emacs-fountain-mode): Update to 3.6.0.
* gnu: emacs-tramp: Update to 2.5.1.5.Nicolas Goaziou2021-11-30
| | | | * gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.5.1.5.
* gnu: Add r-rbokeh.Hong.Li@mdc-berlin.de2021-11-30
| | | | | | * gnu/packages/cran.scm (r-rbokeh): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add r-gistr.Hong.Li@mdc-berlin.de2021-11-30
| | | | * gnu/packages/cran.scm (r-gistr): New variable.
* gnu: r-crul: Update to 1.2.0.Hong Li2021-11-30
| | | | | | * gnu/packages/cran.scm (r-crul): Update to 1.2.0. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add python-woob.Ricardo Wurmus2021-11-30
| | | | * gnu/packages/python-web.scm (python-woob): New variable.
* gnu: Add python-xunitparser.Ricardo Wurmus2021-11-30
| | | | * gnu/packages/python-check.scm (python-xunitparser): New variable.
* gnu: r-umi4cpackage: Embed references to perl and bowtie2.Ricardo Wurmus2021-11-30
| | | | | | | * gnu/packages/bioinformatics.scm (r-umi4cpackage)[arguments]: Add build phases to patch calls of bowtie2 and perl. [inputs]: Add perl and bowtie. [synopsis]: Remove trailing period.
* gnu: coq: Update to 8.14.0.Julien Lepiller2021-11-30
| | | | | | | | * gnu/packages/coq.scm (coq): Update to 8.14.0. (coq-bignums): Update to 8.14.0. (coq-equations): Update to 1.3. * gnu/packages/patches/coq-fix-envvars.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* gnu: proof-general: Update to latest commit.Julien Lepiller2021-11-30
| | | | | * gnu/packages/coq.scm (proof-general): Update to latest commit. [license]: Change to glp3+.
* gnu: coq-semantics: Update to 8.14.0.Julien Lepiller2021-11-30
| | | | * gnu/packages/coq.scm (coq-semantics): Update to 8.14.0.
* services: Accept <inferior-package>s in lieu of <package>s.Tobias Geerinckx-Rice2021-11-30
| | | | | | | | | | | | | | | | | | | | | | | | | * gnu/services/authentication.scm (fprintd-configuration) (nslcd-configuration): Substitute file-like objects for package ones. * gnu/services/cgit.scm (cgit-configuration, opaque-cgit-configuration): Likewise. * gnu/services/cups.scm (package-list?, cups-configuration): Likewise. * gnu/services/dns.scm (verify-knot-configuration) (ddclient-configuration): Likewise. * gnu/services/docker.scm (docker-configuration): Likewise. * gnu/services/file-sharing.scm (transmission-daemon-configuration): Likewise. * gnu/services/getmail.scm (getmail-configuration): Likewise. * gnu/services/mail.scm (dovecot-configuration) (opaque-dovecot-configuration): Likewise. * gnu/services/messaging.scm (prosody-configuration) (opaque-prosody-configuration): Likewise. * gnu/services/monitoring.scm (zabbix-server-configuration) (zabbix-agent-configuration): Likewise. * gnu/services/networking.scm (opendht-configuration): Likewise. * gnu/services/pm.scm (tlp-configuration): Likewise. * gnu/services/telephony.scm (jami-configuration): Likewise. * gnu/services/virtualization.scm (libvirt-configuration) (qemu-guest-agent-configuration): Likewise. * gnu/services/vpn.scm (openvpn-client-configuration): Likewise.
* gnu: squashfs-tools: Update to 4.5.Tobias Geerinckx-Rice2021-11-30
| | | | * gnu/packages/compression.scm (squashfs-tools): Update to 4.5.
* gnu: toybox: Update to 0.8.5.Tobias Geerinckx-Rice2021-11-30
| | | | | | * gnu/packages/busybox.scm (toybox): Update to 0.8.5. [arguments]: Add a new 'fix-or-skip-broken-tests phase. Don't explicitly return #t from the other phases.
* gnu: indi: Update to 1.9.3.Tobias Geerinckx-Rice2021-11-30
| | | | * gnu/packages/astronomy.scm (indi): Update to 1.9.3.
* gnu: simdjson: Update to 1.0.2.Tobias Geerinckx-Rice2021-11-30
| | | | * gnu/packages/cpp.scm (simdjson): Update to 1.0.2.
* gnu: diffoscope: Update to 194.Tobias Geerinckx-Rice2021-11-30
| | | | * gnu/packages/diffoscope.scm (diffoscope): Update to 194.
* gnu: lttoolbox: Omit static libraries.Tobias Geerinckx-Rice2021-11-30
| | | | | * gnu/packages/dictionaries.scm (lttoolbox)[arguments]: Add "--disable-static" to #:configure-flags.
* gnu: lttoolbox: Update to 3.5.4.Tobias Geerinckx-Rice2021-11-30
| | | | * gnu/packages/dictionaries.scm (lttoolbox): Update to 3.5.4.
* gnu: quazip@1: Update to 1.2.Tobias Geerinckx-Rice2021-11-30
| | | | * gnu/packages/compression.scm (quazip): Update to 1.2.
* gnu: thefuck: Update to 3.31.Tobias Geerinckx-Rice2021-11-30
| | | | | * gnu/packages/admin.scm (thefuck): Update to 3.31. [arguments]: Don't call buggy settings.init() during test suite.
* gnu: xa: Update to 2.3.12.Tobias Geerinckx-Rice2021-11-30
| | | | * gnu/packages/assembly.scm (xa): Update to 2.3.12.
* gnu: rxvt-unicode: Update to 9.30.Tobias Geerinckx-Rice2021-11-30
| | | | * gnu/packages/xdisorg.scm (rxvt-unicode): Update to 9.30.
* gnu: ethtool: Update to 5.15.Tobias Geerinckx-Rice2021-11-30
| | | | * gnu/packages/networking.scm (ethtool): Update to 5.15.
* gnu: btrfs-progs: Update to 5.15.1.Tobias Geerinckx-Rice2021-11-30
| | | | * gnu/packages/linux.scm (btrfs-progs): Update to 5.15.1.
* gnu: powerstat: Update to 0.02.27.Tobias Geerinckx-Rice2021-11-30
| | | | * gnu/packages/linux.scm (powerstat): Update to 0.02.27.
* gnu: powerstat: Fetch sources from Git.Tobias Geerinckx-Rice2021-11-30
| | | | | * gnu/packages/linux.scm (powerstat)[source]: Use GIT-FETCH and GIT-FILE-NAME.
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