summaryrefslogtreecommitdiff
path: root/guix/import
diff options
context:
space:
mode:
Diffstat (limited to 'guix/import')
-rw-r--r--guix/import/cran.scm4
-rw-r--r--guix/import/hackage.scm21
2 files changed, 14 insertions, 11 deletions
diff --git a/guix/import/cran.scm b/guix/import/cran.scm
index 89c84f7037..8f2c10258a 100644
--- a/guix/import/cran.scm
+++ b/guix/import/cran.scm
@@ -127,9 +127,9 @@ package definition."
(define %cran-url "http://cran.r-project.org/web/packages/")
(define %bioconductor-url "https://bioconductor.org/packages/")
-;; The latest Bioconductor release is 3.7. Bioconductor packages should be
+;; The latest Bioconductor release is 3.8. Bioconductor packages should be
;; updated together.
-(define %bioconductor-version "3.7")
+(define %bioconductor-version "3.8")
(define %bioconductor-packages-list-url
(string-append "https://bioconductor.org/packages/"
diff --git a/guix/import/hackage.scm b/guix/import/hackage.scm
index 766a0b53f1..48db764b3c 100644
--- a/guix/import/hackage.scm
+++ b/guix/import/hackage.scm
@@ -215,15 +215,18 @@ representation of a Cabal file as produced by 'read-cabal'."
cabal))
(define hackage-native-dependencies
- ((compose (cut filter-dependencies <>
- (cabal-package-name cabal))
- ;; FIXME: Check include-test-dependencies?
- (lambda (cabal)
- (append (if include-test-dependencies?
- (cabal-test-dependencies->names cabal)
- '())
- (cabal-custom-setup-dependencies->names cabal))))
- cabal))
+ (lset-difference
+ equal?
+ ((compose (cut filter-dependencies <>
+ (cabal-package-name cabal))
+ ;; FIXME: Check include-test-dependencies?
+ (lambda (cabal)
+ (append (if include-test-dependencies?
+ (cabal-test-dependencies->names cabal)
+ '())
+ (cabal-custom-setup-dependencies->names cabal))))
+ cabal)
+ hackage-dependencies))
(define dependencies
(map (lambda (name)