diff options
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 19 |
1 files changed, 9 insertions, 10 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index adc5ca572d..cb2fb05633 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -6883,16 +6883,15 @@ structures, classes for genomic regions, mapped sequencing reads, etc.") (modify-phases %standard-phases (delete 'configure)) #:make-flags - (list (string-append "PREFIX=" - (assoc-ref %outputs "out")) - (string-append "LIBBAM=" - (assoc-ref %build-inputs "samtools") - "/lib/libbam.a") - (string-append "SMITHLAB_CPP=" - (assoc-ref %build-inputs "smithlab-cpp") - "/lib") - "PROGS=preseq" - "INCLUDEDIRS=$(SMITHLAB_CPP)/../include/smithlab-cpp $(SAMTOOLS_DIR)"))) + ,#~(list (string-append "PREFIX=" #$output) + (string-append "LIBBAM=" + #$(this-package-input "samtools") + "/lib/libbam.a") + (string-append "SMITHLAB_CPP=" + #$(this-package-input "smithlab-cpp") + "/lib") + "PROGS=preseq" + "INCLUDEDIRS=$(SMITHLAB_CPP)/../include/smithlab-cpp $(SAMTOOLS_DIR)"))) (inputs `(("gsl" ,gsl) ("samtools" ,samtools-0.1) |