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-rw-r--r--gnu/packages/bioconductor.scm30
1 files changed, 30 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index a25f56ad02..ee3ce80f9c 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1518,6 +1518,36 @@ data. In addition, provides numerous plotting functions for commonly
used visualizations.")
(license license:artistic2.0)))
+(define-public r-dearseq
+ (package
+ (name "r-dearseq")
+ (version "1.6.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "dearseq" version))
+ (sha256
+ (base32
+ "07vr27rv3z86ajd62c0ilvfgz9z35qsiwwi5pv4sygbhnnjwh3rc"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-ggplot2" ,r-ggplot2)
+ ("r-kernsmooth" ,r-kernsmooth)
+ ("r-matrixstats" ,r-matrixstats)
+ ("r-patchwork" ,r-patchwork)
+ ("r-pbapply" ,r-pbapply)
+ ("r-statmod" ,r-statmod)
+ ("r-survey" ,r-survey)
+ ("r-viridislite" ,r-kernsmooth)))
+ (home-page "https://github.com/borishejblum/dearseq")
+ (synopsis "DEA for RNA-seq data through a robust variance component test")
+ (description
+ "This is a package for Differential Expression Analysis of RNA-seq data.
+It features a variance component score test accounting for data
+heteroscedasticity through precision weights. Perform both gene-wise and gene
+set analyses, and can deal with repeated or longitudinal data.")
+ (license license:gpl2)))
+
(define-public r-decipher
(package
(name "r-decipher")