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-rw-r--r--gnu/packages/statistics.scm72
1 files changed, 40 insertions, 32 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index dfd26abd5a..904727df2b 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -160,14 +160,14 @@ simulation not wholly unlike BUGS. JAGS was written with three aims in mind:
(define-public libxls
(package
(name "libxls")
- (version "1.5.2")
+ (version "1.5.3")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/libxls/libxls/releases/download/"
"v" version "/libxls-" version ".tar.gz"))
(sha256
- (base32 "1akadsyl10rp101ccjmrxr7933c3v641k377bn74jv6cdkcm4zld"))))
+ (base32 "0rl513wpq5qh7wkmdk4g9c68rzffv3mcbz48p4xyg4969zrx8lnm"))))
(build-system gnu-build-system)
(home-page "https://github.com/libxls/libxls")
(synopsis "Read binary (.xls) Excel spreadsheet files")
@@ -1187,19 +1187,21 @@ and to generate base64 encoded string from raster matrix.")
(define-public r-svglite
(package
(name "r-svglite")
- (version "1.2.3")
+ (version "1.2.3.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "svglite" version))
(sha256
(base32
- "1zivykbi1pxdxhrkc1if1ihdn5p27j0nai2q0abca1dwry3wg2yl"))))
+ "00n8bg4iligl0h24v42cka417w26zmcxrr4r6k8wdal1riwhgmi5"))))
(build-system r-build-system)
(propagated-inputs
`(("r-bh" ,r-bh)
("r-gdtools" ,r-gdtools)
("r-rcpp" ,r-rcpp)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/hadley/svglite")
(synopsis "SVG graphics device")
(description
@@ -1617,13 +1619,13 @@ defined in different packages.")
(define-public r-rlang
(package
(name "r-rlang")
- (version "0.4.6")
+ (version "0.4.7")
(source (origin
(method url-fetch)
(uri (cran-uri "rlang" version))
(sha256
(base32
- "1jik4lywg4688dfi5fh8jbnmsxvq3382ii0nsw5armjzfq3v309s"))))
+ "0f4rhnhyhgrv874l0yzm80ij6vcqdykfd7bzmnqs0wbgyhkxk8vq"))))
(build-system r-build-system)
(home-page "http://rlang.tidyverse.org")
(synopsis "Functions for base types, core R and Tidyverse features")
@@ -1635,14 +1637,14 @@ like tidy evaluation.")
(define-public r-tibble
(package
(name "r-tibble")
- (version "3.0.1")
+ (version "3.0.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "tibble" version))
(sha256
(base32
- "17m7xvn423snq9dmr0bhx42j5rbc53w1viizxx4bvq37nz7m4i8m"))))
+ "0f4yi87w6509lnaz1lhk9s8nm3bzx21ij3273s0zx7vpbp0qlxxz"))))
(build-system r-build-system)
(propagated-inputs
`(("r-cli" ,r-cli)
@@ -2282,13 +2284,13 @@ tables, autolinks and strikethrough text.")
(define-public r-roxygen2
(package
(name "r-roxygen2")
- (version "7.1.0")
+ (version "7.1.1")
(source (origin
(method url-fetch)
(uri (cran-uri "roxygen2" version))
(sha256
(base32
- "00s1wzx5960k8pzgpz4kikjf4k061hyhnd278y65q6n0wzv3d6vy"))))
+ "0qc8akwfwmaqsjaza87f5fi0zk6sh3l6j3assbs6chvx0gnmvidx"))))
(build-system r-build-system)
(propagated-inputs
`(("r-brew" ,r-brew)
@@ -2304,6 +2306,8 @@ tables, autolinks and strikethrough text.")
("r-stringi" ,r-stringi)
("r-stringr" ,r-stringr)
("r-xml2" ,r-xml2)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/klutometis/roxygen")
(synopsis "In-source documentation system for R")
(description
@@ -2314,19 +2318,20 @@ collation, and NAMESPACE files.")
(define-public r-openssl
(package
(name "r-openssl")
- (version "1.4.1")
+ (version "1.4.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "openssl" version))
(sha256
(base32
- "1ihz2qi33lhngl19xdanq0pbmfaacy63794mg8ll7z2lab3yryzp"))))
+ "17fkc6pr8w5z3rpadg692a689p1v4j7xl5ak0y64is7c74cxgljx"))))
(build-system r-build-system)
(inputs
`(("libressl" ,libressl)))
(native-inputs
- `(("pkg-config" ,pkg-config)))
+ `(("pkg-config" ,pkg-config)
+ ("r-knitr" ,r-knitr)))
(propagated-inputs
`(("r-askpass" ,r-askpass)))
(home-page "https://github.com/jeroenooms/openssl")
@@ -2871,13 +2876,13 @@ ldap, and also supports cookies, redirects, authentication, etc.")
(define-public r-xml
(package
(name "r-xml")
- (version "3.99-0.3")
+ (version "3.99-0.4")
(source (origin
(method url-fetch)
(uri (cran-uri "XML" version))
(sha256
(base32
- "0lzpqwajs5xaqdna50vl24qkp9xvh00zypjjzy6kgdzk11isgdw1"))))
+ "1bw6wr17gp0vdnxc5hip47n15nhxwacin3a5992sc7yfb55kaxm5"))))
(properties
`((upstream-name . "XML")))
(build-system r-build-system)
@@ -3546,13 +3551,13 @@ persistent (on the file system).")
(define-public r-r-rsp
(package
(name "r-r-rsp")
- (version "0.43.2")
+ (version "0.44.0")
(source (origin
(method url-fetch)
(uri (cran-uri "R.rsp" version))
(sha256
(base32
- "128zqyvbq9hm9gy86jzhj609lkfw57vr24mdxgh46ncmx66ag4gj"))))
+ "0n9sxrffahgxcc8h9vgxg5i446g14cibixpf82nkpm5bvidhfsc9"))))
(properties `((upstream-name . "R.rsp")))
(build-system r-build-system)
(propagated-inputs
@@ -4212,20 +4217,22 @@ including:
(define-public r-gplots
(package
(name "r-gplots")
- (version "3.0.3")
+ (version "3.0.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "gplots" version))
(sha256
(base32
- "0hs6mk48i9yd43rg9wfjc2nxsjjwrnpifxqvxkv8ah18kvpd6xnp"))))
+ "15ip3v4xiqzbanf8bc5fj90cbwdgixr72aj5jrp34jfdzdx0gxwg"))))
(build-system r-build-system)
(propagated-inputs
`(("r-catools" ,r-catools)
("r-gdata" ,r-gdata)
("r-gtools" ,r-gtools)
("r-kernsmooth" ,r-kernsmooth)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://cran.r-project.org/web/packages/gplots")
(synopsis "Various R programming tools for plotting data")
(description
@@ -4918,14 +4925,14 @@ of the points.")
(define-public r-fpc
(package
(name "r-fpc")
- (version "2.2-6")
+ (version "2.2-7")
(source
(origin
(method url-fetch)
(uri (cran-uri "fpc" version))
(sha256
(base32
- "0lpn951gy58039gk2wh8nsw6qss8m3flkawv55yq3l6373ly79if"))))
+ "1xnp3j36hggfg675v39mnr6rgvp7i11pfng7nmyy3k2ldgklz0j9"))))
(build-system r-build-system)
(propagated-inputs
`(("r-class" ,r-class)
@@ -5087,18 +5094,19 @@ using modular prediction and response module classes.")
(define-public r-quantreg
(package
(name "r-quantreg")
- (version "5.55")
+ (version "5.61")
(source
(origin
(method url-fetch)
(uri (cran-uri "quantreg" version))
(sha256
- (base32 "1zjc8p95kb0ypxa6nxp0lkdq8armkjmmhf8484m25n5f14a59qfb"))))
+ (base32 "0kby1crnzkdg5sczwqapfpkr58apyzrrx85khigcqggmhhwl44wk"))))
(build-system r-build-system)
(native-inputs
`(("gfortran" ,gfortran)))
(propagated-inputs
- `(("r-matrix" ,r-matrix)
+ `(("r-conquer" ,r-conquer)
+ ("r-matrix" ,r-matrix)
("r-matrixmodels" ,r-matrixmodels)
("r-sparsem" ,r-sparsem)))
(home-page "https://www.r-project.org")
@@ -5114,14 +5122,14 @@ expected shortfall risk are also included.")
(define-public r-nloptr
(package
(name "r-nloptr")
- (version "1.2.2.1")
+ (version "1.2.2.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "nloptr" version))
(sha256
(base32
- "1bhh2v14phzndjhiq7yw9vych6vzn5yy3vk9q35zcp3jhjjbwdyh"))))
+ "0whkilb85k4wixvr3k7rygfw1rcs1fs9h8c18kz4p3y1k9hsj3p8"))))
(build-system r-build-system)
(native-inputs
`(("r-knitr" ,r-knitr) ; for building vignettes
@@ -5302,14 +5310,14 @@ normals.")
(define-public r-mnormt
(package
(name "r-mnormt")
- (version "2.0.0")
+ (version "2.0.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "mnormt" version))
(sha256
(base32
- "1gxhma0zqsx5pkc0871vszq1y7akwdmpm8rhws5b3gr6w9mx4agf"))))
+ "00nn0b6nksn2jbpg0np5wphryp4f9v95vqxf5v628yysnawgkcwq"))))
(build-system r-build-system)
(propagated-inputs
`(("r-tmvnsim" ,r-tmvnsim)))
@@ -5442,14 +5450,14 @@ genome-wide association studies can be analyzed efficiently.")
(define-public r-cairo
(package
(name "r-cairo")
- (version "1.5-12")
+ (version "1.5-12.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "Cairo" version))
(sha256
(base32
- "02v29am4fac3fyq6y1w6r89zwbqqkxjsxrafcwb5s124ikxyl22f"))))
+ "14hgz5wmnhlbqkd1g662n1agmjnlj3pq69gfng1vb0ivr02l2lnx"))))
(properties `((upstream-name . "Cairo")))
(build-system r-build-system)
(inputs
@@ -5627,7 +5635,7 @@ parameters.")
(source (origin
(method git-fetch)
(uri (git-reference
- (url "https://github.com/Gibbsdavidl/CatterPlots.git")
+ (url "https://github.com/Gibbsdavidl/CatterPlots")
(commit commit)))
(file-name (git-file-name name version))
(sha256
@@ -5650,7 +5658,7 @@ shaped points? Now you can!")
(origin
(method git-fetch)
(uri (git-reference
- (url "https://github.com/jalvesaq/colorout.git")
+ (url "https://github.com/jalvesaq/colorout")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
generated by cgit v1.2.3 (git 2.45.2) at 2024-08-13 23:57:14 +0000