diff options
Diffstat (limited to 'gnu/packages/statistics.scm')
| -rw-r--r-- | gnu/packages/statistics.scm | 98 |
1 files changed, 48 insertions, 50 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 87cb7def34..9a4cdd219d 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -191,7 +191,7 @@ This package also provides @command{xls2csv} to export Excel files to CSV.") (define r-with-tests (package (name "r-with-tests") - (version "4.1.1") + (version "4.1.2") (source (origin (method url-fetch) (uri (string-append "mirror://cran/src/base/R-" @@ -199,7 +199,7 @@ This package also provides @command{xls2csv} to export Excel files to CSV.") version ".tar.gz")) (sha256 (base32 - "0r6kpnxjbvb7gdfg4m1z8zc6xd225vw81wrnf05ps9ajawk06pji")))) + "1brqmc7mmb0z94kcs4crgl6v9a6sxhm9fm3y177d81vjkxg24di0")))) (build-system gnu-build-system) (arguments `(#:disallowed-references (,tzdata-for-tests) @@ -216,8 +216,7 @@ This package also provides @command{xls2csv} to export Excel files to CSV.") ;; This ensures that Guix can detect embedded store references; ;; see bug #28157 for details. (substitute* "src/library/base/makebasedb.R" - (("compress = TRUE") "compress = FALSE")) - #t)) + (("compress = TRUE") "compress = FALSE")))) (add-before 'configure 'patch-coreutils-paths (lambda* (#:key inputs #:allow-other-keys) (let ((uname-bin (search-input-file inputs "/bin/uname")) @@ -225,8 +224,7 @@ This package also provides @command{xls2csv} to export Excel files to CSV.") (substitute* "src/scripts/R.sh.in" (("uname") uname-bin)) (substitute* "src/unix/sys-std.c" - (("rm -Rf ") (string-append rm-bin " -Rf ")))) - #t)) + (("rm -Rf ") (string-append rm-bin " -Rf ")))))) (add-after 'unpack 'build-reproducibly (lambda _ ;; The documentation contains time stamps to demonstrate @@ -285,17 +283,17 @@ as.POSIXct(if (\"\" != Sys.getenv(\"SOURCE_DATE_EPOCH\")) {\ ;; that is suspected to be the culprit. (substitute* "src/library/methods/DESCRIPTION.in" (("\\(2008\\)\n") "(2008) ") - ((" ``Software") "``Software")) - #t)) + ((" ``Software") "``Software") + (("Data Analysis:.") "Data Analysis:\n") + (("Programming with R") " Programming with R")))) (add-before 'build 'set-locales (lambda _ (setlocale LC_ALL "C") - (setenv "LC_ALL" "C") - #t)) + (setenv "LC_ALL" "C"))) (add-before 'configure 'set-default-pager ;; Set default pager to "cat", because otherwise it is "false", ;; making "help()" print nothing at all. - (lambda _ (setenv "PAGER" "cat") #t)) + (lambda _ (setenv "PAGER" "cat"))) (add-before 'check 'set-timezone ;; Some tests require the timezone to be set. However, the ;; timezone may not just be "UTC", or else a brittle regression @@ -638,13 +636,13 @@ nonlinear mixed-effects models.") (define-public r-mgcv (package (name "r-mgcv") - (version "1.8-37") + (version "1.8-38") (source (origin (method url-fetch) (uri (cran-uri "mgcv" version)) (sha256 - (base32 "14gw714xcyvgrbajijmyd4v8zs84i701g7gyld6z8p7677dgc8w8")))) + (base32 "1fyx8b0xjyx75mp90v314gayzydkca5y90p76jnwxzfnhxbys4nd")))) (build-system r-build-system) (propagated-inputs `(("r-matrix" ,r-matrix) @@ -1047,14 +1045,14 @@ solution for sending email, including attachments, from within R.") (define-public r-stringi (package (name "r-stringi") - (version "1.7.4") + (version "1.7.5") (source (origin (method url-fetch) (uri (cran-uri "stringi" version)) (sha256 (base32 - "1mda4612sc573zabsvygnla3vpnf3mql58fc9j450540h6hlwfv2")))) + "0r959gzyqkq9683qdfy95g9plwpj3c73n9lhf0a6byybw4scq519")))) (build-system r-build-system) (inputs `(("icu4c" ,icu4c))) (native-inputs `(("pkg-config" ,pkg-config))) @@ -1386,13 +1384,13 @@ supported via Andre Simon's highlight package.") (define-public r-mime (package (name "r-mime") - (version "0.11") + (version "0.12") (source (origin (method url-fetch) (uri (cran-uri "mime" version)) (sha256 (base32 - "1h7fz0rqnp970r9q0d95qcxpxm9mb98rqhcdncx0w2qdkyj2fm11")))) + "0j9qbq9jfsp61h2d0xmb87pa2wi8nhb1h2wih7l5drf1sr8i0059")))) (build-system r-build-system) (home-page "https://github.com/yihui/mime") (synopsis "R package to map filenames to MIME types") @@ -1449,13 +1447,13 @@ emitter (http://pyyaml.org/wiki/LibYAML) for R.") (define-public r-knitr (package (name "r-knitr") - (version "1.34") + (version "1.36") (source (origin (method url-fetch) (uri (cran-uri "knitr" version)) (sha256 (base32 - "0p6jdicyqknrqilcjm2h4r6vza5lpzccnsdirj92jb3ljg10b0by")))) + "0hcf5gii0qlvv15f86y6h08qp0hd9lcrykzj0mdfjdfi52sgbkkf")))) (build-system r-build-system) (propagated-inputs `(("r-evaluate" ,r-evaluate) @@ -1602,13 +1600,13 @@ R packages that praise their users.") (define-public r-testthat (package (name "r-testthat") - (version "3.0.4") + (version "3.1.0") (source (origin (method url-fetch) (uri (cran-uri "testthat" version)) (sha256 (base32 - "0iqizv2gpv9fg766qv8hbkmc6c5i9xcfrmq9k5m2550p28zff2w3")))) + "11s98q0gm37z1cqzwvdm9pq26v0zbdq9vc5ssl1nsxhsi42v2577")))) (build-system r-build-system) (propagated-inputs `(("r-brio" ,r-brio) @@ -1664,13 +1662,13 @@ defined in different packages.") (define-public r-rlang (package (name "r-rlang") - (version "0.4.11") + (version "0.4.12") (source (origin (method url-fetch) (uri (cran-uri "rlang" version)) (sha256 (base32 - "1pfm24jjkxzdb5qcbc05dcjxyk69zpfr5jv4xakqh1xh41mr43kl")))) + "05cr08smr8dlk10m810rw4qi1yhgnny83rwkxib0l4my71br29ia")))) (build-system r-build-system) (home-page "http://rlang.tidyverse.org") (synopsis "Functions for base types, core R and Tidyverse features") @@ -1682,14 +1680,14 @@ like tidy evaluation.") (define-public r-tibble (package (name "r-tibble") - (version "3.1.4") + (version "3.1.5") (source (origin (method url-fetch) (uri (cran-uri "tibble" version)) (sha256 (base32 - "0zqpg2haph0qi1x5r6wr083xckab9gw21jbr9spcr8xdf43hx1vk")))) + "1ryv1r3cah1s8dyqdhcb0yl81r384jvgc4d1q9zwsrrsd2x8fqys")))) (build-system r-build-system) (propagated-inputs `(("r-ellipsis" ,r-ellipsis) @@ -1870,13 +1868,13 @@ times.") (define-public r-data-table (package (name "r-data-table") - (version "1.14.0") + (version "1.14.2") (source (origin (method url-fetch) (uri (cran-uri "data.table" version)) (sha256 (base32 - "0kgbvap5v2spnkz3dwfm4jh4qcpvbzdn9s8bzfnhzabz9qjdxw8k")))) + "0arx5wna0sh0vf5q8rjhh8nqdmnvg2pdpbhljl9l0x4kwm8vjhgp")))) (build-system r-build-system) (inputs `(("zlib" ,zlib))) @@ -2284,14 +2282,14 @@ module, Java Server Pages, and Python's psp module.") (define-public r-desc (package (name "r-desc") - (version "1.3.0") + (version "1.4.0") (source (origin (method url-fetch) (uri (cran-uri "desc" version)) (sha256 (base32 - "1sw4vya3l971gpccq4gnjywgbl73bgx8la18l0wy617qv94f905y")))) + "0jfnwn1kpiill8v4hmzdk90yz4gk2ha0prr2p0hq36s40v3y8842")))) (build-system r-build-system) (propagated-inputs `(("r-crayon" ,r-crayon) @@ -2557,13 +2555,13 @@ time-of-day values, based on the @code{difftime} class.") (define-public r-readr (package (name "r-readr") - (version "2.0.1") + (version "2.0.2") (source (origin (method url-fetch) (uri (cran-uri "readr" version)) (sha256 (base32 - "0cj5k3ykkhixgdsqm1gnmpc0d8z04l3fhvm2dr5xp7cpmhgsrpfr")))) + "05bnvcc55i0xjilfrqx3700mwiz8sgihq1wxlbvvr8nxa7bmxc4q")))) (build-system r-build-system) (propagated-inputs `(("r-cli" ,r-cli) @@ -2650,13 +2648,13 @@ well as additional utilities such as panel and axis annotation functions.") (define-public r-rcpparmadillo (package (name "r-rcpparmadillo") - (version "0.10.6.0.0") + (version "0.10.7.0.0") (source (origin (method url-fetch) (uri (cran-uri "RcppArmadillo" version)) (sha256 (base32 - "1bcx8fk5l5mmwb6cw36ndvld9v3amkz6vyc19059dw0xp7mxx04v")))) + "1x35xb5yfslsdpaz9msl5p9f7gilnbkhwvq7pbycwasvkp2fma01")))) (properties `((upstream-name . "RcppArmadillo"))) (build-system r-build-system) (propagated-inputs @@ -4002,13 +4000,13 @@ vignettes.") (define-public r-mvtnorm (package (name "r-mvtnorm") - (version "1.1-2") + (version "1.1-3") (source (origin (method url-fetch) (uri (cran-uri "mvtnorm" version)) (sha256 (base32 - "05wh7mprf2sim2kxh3d72pdcmml6vbikzxavws1dq6mxwlsy2p7j")))) + "0j14q2bkc14v35s5k03sw44zsssrd2qjljlwzj014qxs74hk0kpz")))) (build-system r-build-system) (native-inputs `(("gfortran" ,gfortran))) @@ -4050,13 +4048,13 @@ memory usage.") (define-public r-viridis (package (name "r-viridis") - (version "0.6.1") + (version "0.6.2") (source (origin (method url-fetch) (uri (cran-uri "viridis" version)) (sha256 (base32 - "1fyax36ycjiypcnxhrv58pq67qv03vfg4lx822d38jpjly54q128")))) + "048kwhbhd49g86cq11fl7vm0whwhjl5gs9xjn040lwcjv78qrdb9")))) (build-system r-build-system) (propagated-inputs `(("r-ggplot2" ,r-ggplot2) @@ -4134,14 +4132,14 @@ selection.") (define-public r-tidyr (package (name "r-tidyr") - (version "1.1.3") + (version "1.1.4") (source (origin (method url-fetch) (uri (cran-uri "tidyr" version)) (sha256 (base32 - "0cpbrvr759z8p7r9lpkjhj2dcdymsbnaib0rma9b4jb7i3qzmh2a")))) + "0h8jfsmn4r7zgfyjmg2qkjd54n0sncq07xjh4mdf2cx4k2z9h30b")))) (build-system r-build-system) (propagated-inputs `(("r-cpp11" ,r-cpp11) @@ -4219,13 +4217,13 @@ features present in other programming languages.") (define-public r-plotly (package (name "r-plotly") - (version "4.9.4.1") + (version "4.10.0") (source (origin (method url-fetch) (uri (cran-uri "plotly" version)) (sha256 (base32 - "1q711c0lg0jmzrmcc2fhjy70ms49as7cakdbgbh2ij9s149fa7iq")))) + "16iqj7sv49mva6siibsci7iijsbnk7pqvfns9al0k35w9mjmr6dx")))) (build-system r-build-system) (propagated-inputs `(("r-base64enc" ,r-base64enc) @@ -4422,13 +4420,13 @@ package instead.") (define-public r-hmisc (package (name "r-hmisc") - (version "4.5-0") + (version "4.6-0") (source (origin (method url-fetch) (uri (cran-uri "Hmisc" version)) (sha256 - (base32 "11qj73zj16p113jpwn2vv06l99kqlcxcmrldbpyi5s7pwing9jnx")))) + (base32 "1bd1c8sichyijprfpnqj5g72nmgs9jvi0zyw8v4nsg1kn83fj71c")))) (properties `((upstream-name . "Hmisc"))) (build-system r-build-system) (native-inputs @@ -4683,13 +4681,13 @@ mechanism.") (define-public r-ztable (package (name "r-ztable") - (version "0.2.2") + (version "0.2.3") (source (origin (method url-fetch) (uri (cran-uri "ztable" version)) (sha256 (base32 - "0wxcdb7yp2r6w5iznz1k49npp5sn4jiybfcj30s3198hkcnv0r8y")))) + "1ps7ix0hc84s0p0ra6bkjxky3cffs1rvdcagqzj78lbdq22dk5j8")))) (build-system r-build-system) (propagated-inputs `(("r-flextable" ,r-flextable) @@ -5173,14 +5171,14 @@ can be efficiently implemented directly in the R language.") (define-public r-robustbase (package (name "r-robustbase") - (version "0.93-8") + (version "0.93-9") (source (origin (method url-fetch) (uri (cran-uri "robustbase" version)) (sha256 (base32 - "16fmnk3p32mi70rkx89l1v4pry3gnrpy9jicnlfnk6lg1pwz5j8w")))) + "0i9wf4aq8zpn2np6z2rjja21ks9n740dgkiv0qfwdzk3ah3vapyp")))) (build-system r-build-system) (native-inputs `(("gfortran" ,gfortran))) @@ -5886,18 +5884,18 @@ is supported.") (define-public r-lubridate (package (name "r-lubridate") - (version "1.7.10") + (version "1.8.0") (source (origin (method url-fetch) (uri (cran-uri "lubridate" version)) (sha256 (base32 - "1s653d6rnpf9bkynxmbq4fdjdcz7r9ma19aph8f5y9ck70his4hm")))) + "199b00cql07gf3rf4hh5ba34amnk0ai40zhx73dq1mpkn7ynxml7")))) (build-system r-build-system) (propagated-inputs `(("r-generics" ,r-generics) - ("r-rcpp" ,r-rcpp))) + ("r-cpp11" ,r-cpp11))) (native-inputs `(("r-knitr" ,r-knitr))) (home-page "https://cran.r-project.org/web/packages/lubridate/") |