diff options
Diffstat (limited to 'gnu/packages/statistics.scm')
| -rw-r--r-- | gnu/packages/statistics.scm | 58 |
1 files changed, 54 insertions, 4 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 596c2baf5c..133ce41c43 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -6,7 +6,7 @@ ;;; Copyright © 2016 Pjotr Prins <pjotr.guix@thebird.nl> ;;; Copyright © 2016 Roel Janssen <roel@gnu.org> ;;; Copyright © 2016 Ben Woodcroft <donttrustben@gmail.com> -;;; Copyright © 2016 Raoul Bonnal <ilpuccio.febo@gmail.com> +;;; Copyright © 2016, 2017 Raoul Bonnal <ilpuccio.febo@gmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -116,7 +116,9 @@ be output in text, PostScript, PDF or HTML.") `(#:make-flags (list (string-append "LDFLAGS=-Wl,-rpath=" (assoc-ref %outputs "out") - "/lib/R/lib")) + "/lib/R/lib") + ;; This affects the embedded timestamp of only the core packages. + "PKG_BUILT_STAMP=1970-01-01") #:phases (modify-phases %standard-phases (add-before 'configure 'patch-uname @@ -126,8 +128,13 @@ be output in text, PostScript, PDF or HTML.") (substitute* "src/scripts/R.sh.in" (("uname") uname-bin))) #t)) - (add-before - 'configure 'set-default-pager + (add-after 'unpack 'build-recommended-packages-reproducibly + (lambda _ + (substitute* "src/library/Recommended/Makefile.in" + (("INSTALL_OPTS =.*" line) + (string-append line " --built-timestamp=1970-01-01"))) + #t)) + (add-before 'configure 'set-default-pager ;; Set default pager to "cat", because otherwise it is "false", ;; making "help()" print nothing at all. (lambda _ (setenv "PAGER" "cat") #t)) @@ -4006,6 +4013,27 @@ dispersion modeling and Tweedie power-law families.") ;; Statmod is distributed under either license (license (list license:gpl2 license:gpl3)))) +(define-public r-rann + (package + (name "r-rann") + (version "2.5") + (source (origin + (method url-fetch) + (uri (cran-uri "RANN" version)) + (sha256 + (base32 + "007cgqg9bybg2zlljbv5m6cmlm3r6i251018rpgjcn0xnm9sjsj7")))) + (properties + `((upstream-name . "RANN"))) + (build-system r-build-system) + (home-page "https://github.com/jefferis/RANN") + (synopsis "Fast nearest neighbour search") + (description + "This package finds the k nearest neighbours for every point in a given +dataset in O(N log N) time using Arya and Mount's ANN library. Provides +approximate, exact searches, fixed radius searches, bd and kb trees.") + (license license:gpl3+))) + (define-public r-fivethirtyeight (package (name "r-fivethirtyeight") @@ -4145,3 +4173,25 @@ regression.") perform @dfn{independent component analysis} (ICA) and projection pursuit.") ;; Any GPL version. (license license:gpl3+))) + +(define-public r-randomforest + (package + (name "r-randomforest") + (version "4.6-12") + (source + (origin + (method url-fetch) + (uri (cran-uri "randomForest" version)) + (sha256 + (base32 + "1i43idaihhl6nwqw42v9dqpl6f8z3ykcn2in32lh2755i27jylbf")))) + (properties `((upstream-name . "randomForest"))) + (build-system r-build-system) + (home-page "https://www.stat.berkeley.edu/~breiman/RandomForests/") + (native-inputs + `(("gfortran" ,gfortran))) + (synopsis "Breiman and Cutler's random forests for classification and regression") + (description +"This package provides the Breiman and Cutler's random forests algorithm, based on a +forest of trees using random inputs, for classification and regression.") + (license license:gpl2+))) |