diff options
Diffstat (limited to 'gnu/packages/simulation.scm')
| -rw-r--r-- | gnu/packages/simulation.scm | 36 |
1 files changed, 8 insertions, 28 deletions
diff --git a/gnu/packages/simulation.scm b/gnu/packages/simulation.scm index e1de78402d..ed9a4b8f2e 100644 --- a/gnu/packages/simulation.scm +++ b/gnu/packages/simulation.scm @@ -1,5 +1,6 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2017, 2018, 2019, 2020 Paul Garlick <pgarlick@tourbillion-technology.com> +;;; Copyright © 2021 Maxim Cournoyer <maxim.cournoyer@gmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -267,16 +268,13 @@ problems for efficient solution on parallel systems.") (replace 'check (lambda _ (setenv "HOME" "/tmp") - (setenv "PYTHONPATH" - (string-append (getcwd) ":" (getenv "PYTHONPATH"))) (with-directory-excursion "test" ;; Disable parallel tests to avoid race condition. See ;; https://github.com/pytest-dev/pytest-cov/issues/237. (substitute* "runtests.sh" (("for p in 1 4 8 16; do") "for p in 1; do")) - (invoke "./runtests.sh")) - #t))))) + (invoke "./runtests.sh"))))))) (home-page "https://bitbucket.org/fenics-project/dijitso/") (synopsis "Distributed just-in-time building of shared libraries") (description @@ -312,11 +310,7 @@ the complexity of that interface. Parallel support depends on the (modify-phases %standard-phases (replace 'check (lambda _ - (setenv "PYTHONPATH" - (string-append (getcwd) ":" (getenv "PYTHONPATH"))) - (with-directory-excursion "test" - (invoke "py.test")) - #t))))) + (invoke "py.test" "test")))))) (home-page "https://bitbucket.org/fenics-project/ufl/") (synopsis "Unified language for form-compilers") (description "The Unified Form Language (UFL) is a domain specific @@ -350,8 +344,6 @@ UFL is part of the FEniCS Project.") (modify-phases %standard-phases (replace 'check (lambda _ - (setenv "PYTHONPATH" - (string-append (getcwd) ":" (getenv "PYTHONPATH"))) (with-directory-excursion "test" ;; FIXME: three FIAT test modules are known to fail ;; with recent versions of pytest (>= 4). These are @@ -361,8 +353,7 @@ UFL is part of the FEniCS Project.") (invoke "py.test" "unit/" "--ignore=unit/test_fiat.py" "--ignore=unit/test_quadrature.py" - "--ignore=unit/test_reference_element.py")) - #t))))) + "--ignore=unit/test_reference_element.py"))))))) (home-page "https://bitbucket.org/fenics-project/fiat/") (synopsis "Tabulation of finite element function spaces") (description @@ -402,8 +393,6 @@ FIAT is part of the FEniCS Project.") (replace 'check (lambda _ (setenv "HOME" (getcwd)) - (setenv "PYTHONPATH" - (string-append (getcwd) ":" (getenv "PYTHONPATH"))) (with-directory-excursion "test" ;; FIXME: the tests in subdirectory ;; 'unit/ufc/finite_element' require the ffc_factory @@ -628,8 +617,7 @@ user interface to the FEniCS core components and external libraries.") ;; Define paths to store locations. (setenv "PYBIND11_DIR" (assoc-ref %build-inputs "pybind11")) ;; Move to python sub-directory. - (chdir "python") - #t)) + (chdir "python"))) (add-after 'build 'mpi-setup ,%openmpi-setup) (add-before 'check 'pre-check @@ -671,14 +659,8 @@ user interface to the FEniCS core components and external libraries.") "d for d in demos if d[0].stem not in " "excludeList]\n"))) (setenv "HOME" (getcwd)) - (setenv "PYTHONPATH" - (string-append - (getcwd) "/build/lib.linux-x86_64-" - ,(version-major+minor (package-version python)) ":" - (getenv "PYTHONPATH"))) ;; Restrict OpenBLAS to MPI-only in preference to MPI+OpenMP. - (setenv "OPENBLAS_NUM_THREADS" "1") - #t)) + (setenv "OPENBLAS_NUM_THREADS" "1"))) (replace 'check (lambda _ (with-directory-excursion "test" @@ -690,8 +672,7 @@ user interface to the FEniCS core components and external libraries.") (min 3 (parallel-job-count))) "python" "-B" "-m" "pytest" "unit" "--ignore" - "unit/nls/test_PETScSNES_solver.py")) - #t)) + "unit/nls/test_PETScSNES_solver.py")))) (add-after 'install 'install-demo-files (lambda* (#:key outputs #:allow-other-keys) (let* ((demos (string-append @@ -705,8 +686,7 @@ user interface to the FEniCS core components and external libraries.") (unless (equal? "." dir) (mkdir-p tgt-dir) (install-file file tgt-dir)))) - (find-files "." ".*\\.(py|gz|xdmf)$")))) - #t))))) + (find-files "." ".*\\.(py|gz|xdmf)$"))))))))) (home-page "https://fenicsproject.org/") (synopsis "High-level environment for solving differential equations") (description |