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-rw-r--r--gnu/packages/maths.scm88
1 files changed, 43 insertions, 45 deletions
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index eff1480e62..3cd06b0815 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -327,8 +327,8 @@ programming language.")
(let* ((out (assoc-ref outputs "out"))
(bin (string-append out "/bin")))
(wrap-program (string-append bin "/units_cur")
- `("PYTHONPATH" ":" prefix
- ,(search-path-as-string->list (getenv "PYTHONPATH"))))
+ `("GUIX_PYTHONPATH" ":" prefix
+ ,(search-path-as-string->list (getenv "GUIX_PYTHONPATH"))))
#t))))))
(synopsis "Conversion between thousands of scales")
(description
@@ -477,35 +477,38 @@ precision floating point numbers.")
(build-system gnu-build-system)
(arguments
(let ((system (%current-system)))
- (cond
- ((or (string-prefix? "aarch64" system)
- (string-prefix? "powerpc" system))
- ;; Some sparse matrix tests are failing on AArch64 and PowerPC:
- ;; https://lists.gnu.org/archive/html/bug-gsl/2020-04/msg00001.html
- '(#:phases (modify-phases %standard-phases
- (add-before 'check 'disable-failing-tests
- (lambda _
- (substitute* "spmatrix/test.c"
- ((".*test_complex.*") "\n"))
- #t)))))
- ((string-prefix? "i686" system)
- ;; There are rounding issues with these tests on i686:
- ;; https://lists.gnu.org/archive/html/bug-gsl/2016-10/msg00000.html
- ;; https://lists.gnu.org/archive/html/bug-gsl/2020-04/msg00000.html
- '(#:phases (modify-phases %standard-phases
- (add-before 'check 'disable-failing-tests
- (lambda _
- (substitute* "linalg/test.c"
- ((".*gsl_test\\(test_LU_decomp.*") "\n")
- ((".*gsl_test\\(test_LUc_decomp.*") "\n")
- ((".*gsl_test\\(test_cholesky_decomp.*") "\n")
- ((".*gsl_test\\(test_COD_lssolve2.*") "\n"))
- (substitute* "spmatrix/test.c"
- ((".*test_all.*") "\n")
- ((".*test_float.*") "\n")
- ((".*test_complex.*") "\n"))
- #t)))))
- (else '()))))
+ `(#:configure-flags (list "--disable-static") ;halves package size
+ #:phases
+ (modify-phases %standard-phases
+ ,@(cond
+ ((or (string-prefix? "aarch64" system)
+ (string-prefix? "powerpc" system))
+ ;; Some sparse matrix tests are failing on AArch64 and PowerPC:
+ ;; https://lists.gnu.org/archive/html/bug-gsl/2020-04/msg00001.html
+ '((add-before 'check 'disable-failing-tests
+ (lambda _
+ (substitute* "spmatrix/test.c"
+ ((".*test_complex.*") "\n"))
+ #t))))
+
+ ((string-prefix? "i686" system)
+ ;; There are rounding issues with these tests on i686:
+ ;; https://lists.gnu.org/archive/html/bug-gsl/2016-10/msg00000.html
+ ;; https://lists.gnu.org/archive/html/bug-gsl/2020-04/msg00000.html
+ '((add-before 'check 'disable-failing-tests
+ (lambda _
+ (substitute* "linalg/test.c"
+ ((".*gsl_test\\(test_LU_decomp.*") "\n")
+ ((".*gsl_test\\(test_LUc_decomp.*") "\n")
+ ((".*gsl_test\\(test_cholesky_decomp.*") "\n")
+ ((".*gsl_test\\(test_COD_lssolve2.*") "\n"))
+ (substitute* "spmatrix/test.c"
+ ((".*test_all.*") "\n")
+ ((".*test_float.*") "\n")
+ ((".*test_complex.*") "\n"))
+ #t))))
+
+ (else '()))))))
(home-page "https://www.gnu.org/software/gsl/")
(synopsis "Numerical library for C and C++")
(description
@@ -2010,7 +2013,7 @@ script files.")
,@(package-inputs octave-cli)))
(native-inputs
`(("qttools" , qttools) ;for lrelease
- ("texlive" ,(texlive-union (list texlive-epsf))) ; for texi2dvi
+ ("texlive" ,(texlive-updmap.cfg (list texlive-epsf))) ; for texi2dvi
,@(package-native-inputs octave-cli)))
(arguments
(substitute-keyword-arguments (package-arguments octave-cli)
@@ -3637,16 +3640,17 @@ parts of it.")
(define-public openblas
(package
(name "openblas")
- (version "0.3.9")
+ (version "0.3.13")
(source
(origin
- (method url-fetch)
- (uri (string-append "mirror://sourceforge/openblas/v" version "/OpenBLAS%20"
- version "%20version.tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/xianyi/OpenBLAS")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
(sha256
(base32
- "14iz9xnrb9xiwgj84j94mc74gg0zn2vsy9fmsijxxma1n7dck4w3"))))
+ "14jxh0v3jfbw4mfjx4mcz4dd51lyq7pqvh9k8dg94539ypzjr2lj"))))
(build-system gnu-build-system)
(arguments
`(#:test-target "test"
@@ -4454,7 +4458,7 @@ set.")
`(("doc++" ,doc++)
("netpbm" ,netpbm)
("perl" ,perl) ; needed to run 'ppmquant' during tests
- ("texlive" ,(texlive-union (list texlive-xypic
+ ("texlive" ,(texlive-updmap.cfg (list texlive-xypic
texlive-cm
texlive-latex-hyperref
texlive-bibtex)))
@@ -4474,12 +4478,6 @@ set.")
"--with-blas")
#:phases
(modify-phases %standard-phases
- (add-before 'build 'set-HOME
- (lambda _
- ;; FIXME: texlive-union does not find the built
- ;; metafonts, so it tries to generate them in HOME.
- (setenv "HOME" "/tmp")
- #t))
(add-before 'configure 'chdir-src
(lambda _ (chdir "src")))
(replace 'configure