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-rw-r--r--gnu/packages/machine-learning.scm64
1 files changed, 18 insertions, 46 deletions
diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm
index 15e0d5fc38..db8c8dedc8 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -16,7 +16,7 @@
;;; Copyright © 2020 Konrad Hinsen <konrad.hinsen@fastmail.net>
;;; Copyright © 2020 Edouard Klein <edk@beaver-labs.com>
;;; Copyright © 2020, 2021 Vinicius Monego <monego@posteo.net>
-;;; Copyright © 2020 Maxim Cournoyer <maxim.cournoyer@gmail.com>
+;;; Copyright © 2020, 2021 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -222,20 +222,7 @@ classification.")
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'enter-dir
- (lambda _ (chdir "ghmm") #t))
- (delete 'check)
- (add-after 'install 'check
- (assoc-ref %standard-phases 'check))
- (add-before 'check 'fix-PYTHONPATH
- (lambda* (#:key inputs outputs #:allow-other-keys)
- (let ((python-version (python-version
- (assoc-ref inputs "python"))))
- (setenv "PYTHONPATH"
- (string-append (getenv "PYTHONPATH")
- ":" (assoc-ref outputs "out")
- "/lib/python" python-version
- "/site-packages")))
- #t))
+ (lambda _ (chdir "ghmm")))
(add-after 'enter-dir 'fix-runpath
(lambda* (#:key outputs #:allow-other-keys)
(substitute* "ghmmwrapper/setup.py"
@@ -246,8 +233,7 @@ classification.")
line
"\"-Wl,-rpath="
(assoc-ref outputs "out")
- "/lib\", ")))
- #t))
+ "/lib\", ")))))
(add-after 'enter-dir 'disable-broken-tests
(lambda _
(substitute* "tests/Makefile.am"
@@ -267,8 +253,7 @@ classification.")
line indent)
(string-append indent
"@unittest.skip(\"Disabled by Guix\")\n"
- line)))
- #t)))))
+ line))))))))
(inputs
`(("python" ,python-2) ; only Python 2 is supported
("libxml2" ,libxml2)))
@@ -1642,7 +1627,7 @@ automatically.")
(let* ((server (string-append bin "/kaldi-gst-server"))
(client (string-append bin "/kaldi-gst-client"))
(worker (string-append bin "/kaldi-gst-worker"))
- (PYTHONPATH (getenv "PYTHONPATH"))
+ (PYTHONPATH (getenv "GUIX_PYTHONPATH"))
(GST_PLUGIN_PATH (string-append
(assoc-ref inputs "gst-kaldi-nnet2-online")
"/lib/gstreamer-1.0:${GST_PLUGIN_PATH}"))
@@ -1651,7 +1636,7 @@ automatically.")
(lambda _
(format #t
"#!~a
-export PYTHONPATH=~a
+export GUIX_PYTHONPATH=~a
export GST_PLUGIN_PATH=~a
exec ~a ~a/~a \"$@\"~%"
(which "bash") PYTHONPATH GST_PLUGIN_PATH
@@ -1775,10 +1760,9 @@ Python.")
;; https://github.com/tensorflow/tensorflow/issues/34197
(substitute* (find-files "tensorflow/python" ".*\\.cc$")
(("(nullptr,)(\\ +/. tp_print)" _ _ tp_print)
- (string-append "NULL, " tp_print)))
- #t))
+ (string-append "NULL, " tp_print)))))
(add-after 'python3.7-compatibility 'chdir
- (lambda _ (chdir "tensorflow/contrib/cmake") #t))
+ (lambda _ (chdir "tensorflow/contrib/cmake")))
(add-after 'chdir 'disable-downloads
(lambda* (#:key inputs #:allow-other-keys)
(substitute* (find-files "external" "\\.cmake$")
@@ -1793,36 +1777,31 @@ Python.")
;; Sqlite
(("include\\(sqlite\\)") "")
(("\\$\\{sqlite_STATIC_LIBRARIES\\}")
- (string-append (assoc-ref inputs "sqlite")
- "/lib/libsqlite3.so"))
+ (search-input-file inputs "/lib/libsqlite3.so"))
(("sqlite_copy_headers_to_destination") "")
;; PNG
(("include\\(png\\)") "")
(("\\$\\{png_STATIC_LIBRARIES\\}")
- (string-append (assoc-ref inputs "libpng")
- "/lib/libpng16.so"))
+ (search-input-file inputs "/lib/libpng16.so"))
(("png_copy_headers_to_destination") "")
;; JPEG
(("include\\(jpeg\\)") "")
(("\\$\\{jpeg_STATIC_LIBRARIES\\}")
- (string-append (assoc-ref inputs "libjpeg")
- "/lib/libjpeg.so"))
+ (search-input-file inputs "/lib/libjpeg.so"))
(("jpeg_copy_headers_to_destination") "")
;; GIF
(("include\\(gif\\)") "")
(("\\$\\{gif_STATIC_LIBRARIES\\}")
- (string-append (assoc-ref inputs "giflib")
- "/lib/libgif.so"))
+ (search-input-file inputs "/lib/libgif.so"))
(("gif_copy_headers_to_destination") "")
;; lmdb
(("include\\(lmdb\\)") "")
(("\\$\\{lmdb_STATIC_LIBRARIES\\}")
- (string-append (assoc-ref inputs "lmdb")
- "/lib/liblmdb.so"))
+ (search-input-file inputs "/lib/liblmdb.so"))
(("lmdb_copy_headers_to_destination") "")
;; Protobuf
@@ -1915,8 +1894,7 @@ set(eigen_INCLUDE_DIRS ${CMAKE_CURRENT_BINARY_DIR}/external/eigen_archive "
"re2"))
(rename-file "../build/cub/src/cub/cub-1.8.0/"
- "../build/cub/src/cub/cub/")
- #t))
+ "../build/cub/src/cub/cub/")))
(add-after 'unpack 'fix-python-build
(lambda* (#:key inputs outputs #:allow-other-keys)
(mkdir-p "protobuf-src")
@@ -1927,9 +1905,6 @@ set(eigen_INCLUDE_DIRS ${CMAKE_CURRENT_BINARY_DIR}/external/eigen_archive "
"-C" "eigen-src" "--strip-components=1")
(substitute* "tensorflow/contrib/cmake/tf_python.cmake"
- ;; Ensure that all Python dependencies can be found at build time.
- (("PYTHONPATH=\\$\\{CMAKE_CURRENT_BINARY_DIR\\}/tf_python" m)
- (string-append m ":" (getenv "PYTHONPATH")))
;; Take protobuf source files from our source package.
(("\\$\\{CMAKE_CURRENT_BINARY_DIR\\}/protobuf/src/protobuf/src/google")
(string-append (getcwd) "/protobuf-src/src/google")))
@@ -1941,7 +1916,7 @@ set(eigen_INCLUDE_DIRS ${CMAKE_CURRENT_BINARY_DIR}/external/eigen_archive "
(string-append (getcwd) "/eigen-src/"))
;; Take Eigen headers from our own package.
(("\\$\\{CMAKE_CURRENT_BINARY_DIR\\}/external/eigen_archive")
- (string-append (assoc-ref inputs "eigen") "/include/eigen3")))
+ (search-input-directory inputs "/include/eigen3")))
;; Correct the RUNPATH of ops libraries generated for Python.
;; TODO: this doesn't work :(
@@ -1955,15 +1930,13 @@ set(eigen_INCLUDE_DIRS ${CMAKE_CURRENT_BINARY_DIR}/external/eigen_archive "
(string-append "set_target_properties(${_AT_TARGET} PROPERTIES \
COMPILE_FLAGS ${target_compile_flags} \
INSTALL_RPATH_USE_LINK_PATH TRUE \
-INSTALL_RPATH " (assoc-ref outputs "out") "/lib)\n")))
- #t))
+INSTALL_RPATH " (assoc-ref outputs "out") "/lib)\n")))))
(add-after 'build 'build-pip-package
(lambda* (#:key outputs #:allow-other-keys)
(setenv "LDFLAGS"
(string-append "-Wl,-rpath="
(assoc-ref outputs "out") "/lib"))
- (invoke "make" "tf_python_build_pip_package")
- #t))
+ (invoke "make" "tf_python_build_pip_package")))
(add-after 'build-pip-package 'install-python
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out"))
@@ -1978,8 +1951,7 @@ INSTALL_RPATH " (assoc-ref outputs "out") "/lib)\n")))
(string-append
out "/lib/python" python-version
"/site-packages/tensorflow/contrib/"
- "seq2seq/python/ops/lib_beam_search_ops.so"))
- #t))))))
+ "seq2seq/python/ops/lib_beam_search_ops.so"))))))))
(native-inputs
`(("pkg-config" ,pkg-config)
("protobuf:native" ,protobuf-3.6) ; protoc
generated by cgit v1.2.3 (git 2.45.0) at 2024-06-11 11:48:53 +0000