diff options
Diffstat (limited to 'gnu/packages/cran.scm')
| -rw-r--r-- | gnu/packages/cran.scm | 766 |
1 files changed, 413 insertions, 353 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 95de77e3a7..5a8285b342 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -255,14 +255,14 @@ etc.") (define-public r-datawizard (package (name "r-datawizard") - (version "0.4.0") + (version "0.4.1") (source (origin (method url-fetch) (uri (cran-uri "datawizard" version)) (sha256 (base32 - "1j26xv1zm7qwp80gy6vlysq3zxdj9r8ivi54b1d6s0ckqkww6gja")))) + "09lyh1awm2rplfzgwbdw4iy76mbaqwjd4hwlrsgvxj9pwdnjs4cx")))) (properties `((upstream-name . "datawizard"))) (build-system r-build-system) (propagated-inputs @@ -347,6 +347,29 @@ visualization of their differences.") (description "This package implements Dirichlet regression models.") (license license:gpl2+))) +(define-public r-dixontest + (package + (name "r-dixontest") + (version "1.0.3") + (source + (origin + (method url-fetch) + (uri (cran-uri "dixonTest" version)) + (sha256 + (base32 "1a3yc30g5rbb0jhm2b0iir5i1dy4jyl67spkhx4yysg4snz131wv")))) + (properties `((upstream-name . "dixonTest"))) + (build-system r-build-system) + (native-inputs (list gfortran)) + (home-page "https://cran.r-project.org/package=dixonTest") + (synopsis "Dixon's ratio test for outlier detection") + (description + "For outlier detection in small and normally distributed samples the ratio +test of Dixon (Q-test) can be used. Density, distribution function, quantile +function and random generation for Dixon's ratio statistics are provided as +wrapper functions. The core applies McBane's Fortran functions that use +Gaussian quadrature for a numerical solution.") + (license license:gpl3))) + (define-public r-emdist (package (name "r-emdist") @@ -682,14 +705,14 @@ similar rank-based tests for equal probability distributions due to Neuhauser (define-public r-v8 (package (name "r-v8") - (version "4.1.0") + (version "4.2.0") (source (origin (method url-fetch) (uri (cran-uri "V8" version)) (sha256 (base32 - "15ylzcxlhkba99cccw5rvhwhg9i4zcax2fhmr03w8g4fdhbd3n89")))) + "0hs7ajjw6y3q7mp7z00a9712y4cn6wgcnk5dbjbzlc6cfk4zsqkc")))) (properties `((upstream-name . "V8"))) (build-system r-build-system) (arguments @@ -814,13 +837,13 @@ known as Dynamic Linear Models.") (define-public r-zoo (package (name "r-zoo") - (version "1.8-9") + (version "1.8-10") (source (origin (method url-fetch) (uri (cran-uri "zoo" version)) (sha256 (base32 - "18vjywalpgzqyk66gajb8x1yp8avdaaf11ykynld9fd8cy82bgmp")))) + "0izd66dywq6qd62hdp64apncainrrb9mgmm19wf6a8jc03c858n9")))) (build-system r-build-system) (propagated-inputs (list r-lattice)) @@ -1202,13 +1225,13 @@ available as companion packages.") (define-public r-scales (package (name "r-scales") - (version "1.1.1") + (version "1.2.0") (source (origin (method url-fetch) (uri (cran-uri "scales" version)) (sha256 - (base32 "019ps0njjc0rzrjygqiyn8b9vp0c3c0jd56h1yi19wzi49jvdcj0")))) + (base32 "1pq2rrix6a5gsi8xw38viiydp1bsxxmcmyy7dv9q8gkb1qj50p8q")))) (build-system r-build-system) (propagated-inputs (list r-farver @@ -1216,6 +1239,7 @@ available as companion packages.") r-lifecycle r-munsell r-rcolorbrewer + r-rlang r-r6 r-viridislite)) (home-page "https://github.com/hadley/scales") @@ -1345,13 +1369,13 @@ with default R plot functions.") (define-public r-polychrome (package (name "r-polychrome") - (version "1.3.1") + (version "1.5.1") (source (origin (method url-fetch) (uri (cran-uri "Polychrome" version)) (sha256 - (base32 "044vbylgbqf0ccv4r15nmbw1vz0j95g67i6blw73hvbvbm6w5x4d")))) + (base32 "0hyi02m2jpdhk1ky6ihz6dv5pwqwjwk4csjim2qr8ywx8midmrvg")))) (properties `((upstream-name . "Polychrome"))) (build-system r-build-system) (propagated-inputs @@ -1497,13 +1521,13 @@ objects.") (define-public r-mboost (package (name "r-mboost") - (version "2.9-6") + (version "2.9-7") (source (origin (method url-fetch) (uri (cran-uri "mboost" version)) (sha256 (base32 - "1gvcq1y9prpgxw5kxa20l31p384gksfx0pn7gf29jbl3cknqiyix")))) + "01ln0vxbbx1fq77q17sx61si82lhfibbchsnf2yw9032cn8wnhh2")))) (build-system r-build-system) (propagated-inputs (list r-lattice @@ -1526,13 +1550,13 @@ high-dimensional data.") (define-public r-shadowtext (package (name "r-shadowtext") - (version "0.1.1") + (version "0.1.2") (source (origin (method url-fetch) (uri (cran-uri "shadowtext" version)) (sha256 (base32 - "01h0w3b02r8snjkx5sxkf2x8xm4gd0r8jm27xqz9cv6hgqfmh1pb")))) + "0zdfidrcnmxmfhngv86ppxrjmpmz9kl78l4yfah2lc5vgmrlwg15")))) (properties `((upstream-name . "shadowtext"))) (build-system r-build-system) (propagated-inputs @@ -1623,13 +1647,13 @@ read a protected key.") (define-public r-astsa (package (name "r-astsa") - (version "1.14") + (version "1.15") (source (origin (method url-fetch) (uri (cran-uri "astsa" version)) (sha256 - (base32 "09zx2q419p0b1c336ybh4i62v5dvn3sp39dxn5kwlrqchjj7f5z6")))) + (base32 "0mllsq0xdqkviyvs77lq565r1vznsj1qp9cnlj5p48k9v76d7arp")))) (properties `((upstream-name . "astsa"))) (build-system r-build-system) (home-page "https://github.com/nickpoison/astsa/") @@ -1646,14 +1670,14 @@ Analysis Approach Using R. Chapman-Hall, 2019, (define-public r-vegan (package (name "r-vegan") - (version "2.5-7") + (version "2.6-2") (source (origin (method url-fetch) (uri (cran-uri "vegan" version)) (sha256 (base32 - "0aj6m9l1vkh32sar6fyvq4p8j4h2f2f347w1300qnzgaa5lmhfz6")))) + "0nf0ny6jzfy135xiygzzkr0y55y8g27hrbk8c869plarr48d2xxb")))) (build-system r-build-system) (native-inputs (list r-knitr ; needed for vignettes @@ -2299,14 +2323,14 @@ data structures in C++.") (define-public r-fastghquad (package (name "r-fastghquad") - (version "1.0") + (version "1.0.1") (source (origin (method url-fetch) (uri (cran-uri "fastGHQuad" version)) (sha256 (base32 - "1rjia8wggadr9xwxcmzmal0rc4g6pa3dr5888fbbnb6abl8b2lrj")))) + "1zj7nsbnx4g253m3dpz9vi3zk3jxwrixwjw1ks6n4shpb4dlkp2w")))) (properties `((upstream-name . "fastGHQuad"))) (build-system r-build-system) (propagated-inputs @@ -2321,14 +2345,14 @@ rules and utility functions for adaptive GH quadrature.") (define-public r-rstpm2 (package (name "r-rstpm2") - (version "1.5.2") + (version "1.5.6") (source (origin (method url-fetch) (uri (cran-uri "rstpm2" version)) (sha256 (base32 - "0c6l3z250b2kn6mh2xyb0bd2y5nsbj11n9xfi51dac9s8xq3v7m4")))) + "17mhzfxh761vl64ar6pynpj3k2jkhjgbacxsjhkrfkbmy3aiv0d1")))) (properties `((upstream-name . "rstpm2"))) (build-system r-build-system) (propagated-inputs @@ -2814,13 +2838,13 @@ application framework for R, making it easy to create attractive dashboards.") (define-public r-shinyfiles (package (name "r-shinyfiles") - (version "0.9.1") + (version "0.9.2") (source (origin (method url-fetch) (uri (cran-uri "shinyFiles" version)) (sha256 - (base32 "0f8dfdiar376lx0979ccyghgx5rhr08v5z3z60asrrjsxlq4cs85")))) + (base32 "1l4a4v9ivxkj2vx6xw4z3pk7a8px23icppcgvgpybibq2j74pglg")))) (properties `((upstream-name . "shinyFiles"))) (build-system r-build-system) (propagated-inputs @@ -3451,14 +3475,14 @@ including functions for geolocation and routing.") (define-public r-haven (package (name "r-haven") - (version "2.4.3") + (version "2.5.0") (source (origin (method url-fetch) (uri (cran-uri "haven" version)) (sha256 (base32 - "0pr9jcdk1r9pi9iz0xm1g5yy5qyjk5r7hh9467abx4kpwx3hzdwm")) + "1x5g6kjrzcyarbjz91f4aaspx7rb50qs6a9y29mzr3mjq4dk305m")) (modules '((guix build utils))) (snippet ;; unvendor readstat @@ -3477,9 +3501,11 @@ including functions for geolocation and routing.") (native-inputs (list r-knitr)) (propagated-inputs - (list r-cpp11 + (list r-cli + r-cpp11 r-forcats r-hms + r-lifecycle r-rlang r-readr r-tibble @@ -3740,13 +3766,13 @@ print, summary, plot, update, etc. (define-public r-ps (package (name "r-ps") - (version "1.6.0") + (version "1.7.0") (source (origin (method url-fetch) (uri (cran-uri "ps" version)) (sha256 - (base32 "0cdzjqgap108whhsilxllg12m2d05pgksryhrz5bq608bvf7vbc9")))) + (base32 "1qaj9gyz7q09aadlnj5al53k2pa4axmzjsbndf5r0b51qqrcy842")))) (build-system r-build-system) (home-page "https://ps.r-lib.org") (synopsis "List, query, and manipulate system processes") @@ -3855,6 +3881,27 @@ and Francois (2011, JSS), and the book by Eddelbuettel (2013, Springer); see @code{citation(\"Rcpp\")} for details on these last two.") (license license:gpl2+))) +(define-public r-rcppml + (package + (name "r-rcppml") + (version "0.3.7") + (source + (origin + (method url-fetch) + (uri (cran-uri "RcppML" version)) + (sha256 + (base32 "1ih8i7i6m221iw227mnl3rvnaw2l53h8fpnc4f8yn9sm10anap1j")))) + (properties `((upstream-name . "RcppML"))) + (build-system r-build-system) + (propagated-inputs (list r-matrix r-rcpp r-rcppeigen)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/zdebruine/RcppML") + (synopsis "Rcpp machine learning library") + (description + "This package provides fast machine learning algorithms including matrix +factorization and divisive clustering for large sparse and dense matrices.") + (license license:gpl2+))) + (define-public r-rcppthread (package (name "r-rcppthread") @@ -3899,13 +3946,13 @@ with @code{Rcpp}.") (define-public r-rcppxptrutils (package (name "r-rcppxptrutils") - (version "0.1.1") + (version "0.1.2") (source (origin (method url-fetch) (uri (cran-uri "RcppXPtrUtils" version)) (sha256 - (base32 "0jh64c46gp99d2nsih14vx34pamc8i7gkmiy2nj94rx3sxq62yh5")))) + (base32 "0hm57nf4dzgsmg4hjj6wikwjx93fgfwkmybw6ly4b58wi6qwml1l")))) (properties `((upstream-name . "RcppXPtrUtils"))) (build-system r-build-system) (propagated-inputs (list r-rcpp)) @@ -4044,14 +4091,14 @@ validation and filtering on the values, making options invisible or private.") (define-public r-circlize (package (name "r-circlize") - (version "0.4.14") + (version "0.4.15") (source (origin (method url-fetch) (uri (cran-uri "circlize" version)) (sha256 (base32 - "0b0yqjmbj1s1jg7y6cgyawadlfv0i6xrls8a4qy9qs7hz8zrpvb1")))) + "1iswb7dy08as3pbzxvhx5qlsbnwvp79nwg8m158nfz7y2d9xa0nn")))) (build-system r-build-system) (propagated-inputs (list r-colorspace r-globaloptions r-shape)) @@ -4196,14 +4243,14 @@ any subsequent lookup as it keeps the hash table in memory.") (define-public r-ff (package (name "r-ff") - (version "4.0.5") + (version "4.0.7") (source (origin (method url-fetch) (uri (cran-uri "ff" version)) (sha256 (base32 - "0dsh6llfdz04w94xr3yl2b4vkk9g3rwhvfnxcd025v2424krxfls")))) + "1yl3ipzz9bjkfy9bbna7xz5n7iz4lchnw5l7agww7by764yk6iqa")))) (build-system r-build-system) (propagated-inputs (list r-bit)) (home-page "http://ff.r-forge.r-project.org/") @@ -4278,17 +4325,17 @@ curve to a data matrix in arbitrary dimensions.") (define-public r-reshape (package (name "r-reshape") - (version "0.8.8") + (version "0.8.9") (source (origin (method url-fetch) (uri (cran-uri "reshape" version)) (sha256 (base32 - "0s6i0sqxg1vldxs6miv8mi0zydxbqzgpmzfiwkj8y7jix3yrfmad")))) + "0j203qmc076x5lp6q2xi4dq4xdb73jmsa42rpxp1c37knnrph4br")))) (build-system r-build-system) (propagated-inputs - (list r-plyr r-rcpp)) + (list r-plyr)) (home-page "http://had.co.nz/reshape") (synopsis "Flexibly reshape data") (description @@ -4299,16 +4346,17 @@ curve to a data matrix in arbitrary dimensions.") (define-public r-restrserve (package (name "r-restrserve") - (version "1.0.0") + (version "1.1.1") (source (origin (method url-fetch) (uri (cran-uri "RestRserve" version)) (sha256 - (base32 "0qb1x13n2sm0lg52x3289jsln3gw9rawfs1z2372pvr9ydpjsfqb")))) + (base32 "1ydsdgy6mxl0zqk7xqf4v6if5nf2qv7k48q340fhaqyjk2gd60p7")))) (build-system r-build-system) (propagated-inputs (list r-checkmate + r-digest r-jsonlite r-mime r-r6 @@ -4411,13 +4459,13 @@ most popular ones.") (define-public r-sp (package (name "r-sp") - (version "1.4-6") + (version "1.4-7") (source (origin (method url-fetch) (uri (cran-uri "sp" version)) (sha256 - (base32 "09m2ddbrbs2aqnq5si42ipa0g1vbd0pxg4zbcx59is2047pv7sws")))) + (base32 "1bdi06n5zkjnnyh0rallf04s0vlcx9rg9p5q7s6vfqvkf19nk501")))) (build-system r-build-system) (propagated-inputs (list r-lattice)) @@ -4455,14 +4503,14 @@ a variety of different samplers.") (define-public r-rmtstat (package (name "r-rmtstat") - (version "0.3") + (version "0.3.1") (source (origin (method url-fetch) (uri (cran-uri "RMTstat" version)) (sha256 (base32 - "1nn25q4kmh9kj975sxkrpa97vh5irqrlqhwsfinbck6h6ia4rsw1")))) + "1r1a2sdqv64m9cpm2pz6r8abf7l810126ayd8iq3gx86c7bjfj5v")))) (properties `((upstream-name . "RMTstat"))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/RMTstat") @@ -4616,14 +4664,14 @@ spreadsheet software.") (define-public r-extremes (package (name "r-extremes") - (version "2.1-1") + (version "2.1-2") (source (origin (method url-fetch) (uri (cran-uri "extRemes" version)) (sha256 (base32 - "00ps7yggp89sx1j0w6c8dk0la3k95rwjv1iz7rdfqy7i46xjf6as")))) + "19q560prq02h3bwk01jb68693qb5bhsv8wiqhia7v5knm34qv8x7")))) (properties `((upstream-name . "extRemes"))) (build-system r-build-system) (propagated-inputs @@ -4763,14 +4811,14 @@ matrices, a special case of sparse matrices.") (define-public r-bbmle (package (name "r-bbmle") - (version "1.0.24") + (version "1.0.25") (source (origin (method url-fetch) (uri (cran-uri "bbmle" version)) (sha256 (base32 - "1bck8rmink4wsk8pcbnj4d60svxymp29pxbzwj8p9gzsg42c1v81")))) + "0mdj21q7k0fp4cj7la14vmcjmp49zqm57g7r6zrwmxpv0acwda46")))) (build-system r-build-system) (propagated-inputs (list r-bdsmatrix @@ -4899,14 +4947,14 @@ data). Weighted versions of MLE, MME and QME are available.") (define-public r-energy (package (name "r-energy") - (version "1.7-9") + (version "1.7-10") (source (origin (method url-fetch) (uri (cran-uri "energy" version)) (sha256 (base32 - "1ndssfi0hbnsm5jwrns7m63ppxm221hd6gk0b0wa1a7mk7ny1l38")))) + "19xyw5bkyzfk22gly2ca2nsznqnrhaq4a77727kr1k26bj3y8gal")))) (build-system r-build-system) (propagated-inputs (list r-boot r-gsl r-rcpp)) @@ -5265,14 +5313,14 @@ Optimization problems by using the simplex algorithm.") (define-public r-geometry (package (name "r-geometry") - (version "0.4.5") + (version "0.4.6") (source (origin (method url-fetch) (uri (cran-uri "geometry" version)) (sha256 (base32 - "1n10l8ax3783v3lgaacb15qsn8b3f0wpmhg3k39j31s6ciyd3vcg")))) + "1n7m0djqlhrv01l98r76grkki6cv4k4q2z6c7fksqgq4r2l6a14i")))) (build-system r-build-system) (propagated-inputs (list r-magic r-linprog r-lpsolve r-rcpp r-rcppprogress)) @@ -5401,14 +5449,14 @@ problems as well as resampling based estimators of prediction error.") (define-public r-psych (package (name "r-psych") - (version "2.2.3") + (version "2.2.5") (source (origin (method url-fetch) (uri (cran-uri "psych" version)) (sha256 (base32 - "0fi7gcaxcb1mdyfpgjm03sxz3qgp1s0hnrgx8pyswni5skb903pn")))) + "08f3byqwabgkqcxwpjbsxdcjkdg012iraqinw0fzskfl1srzkhyw")))) (build-system r-build-system) (propagated-inputs (list r-lattice r-mnormt r-nlme)) @@ -5454,14 +5502,14 @@ by base R methods related to model fitting.") (define-public r-broom (package (name "r-broom") - (version "0.7.12") + (version "0.8.0") (source (origin (method url-fetch) (uri (cran-uri "broom" version)) (sha256 (base32 - "1nbv4a4s8548h2q226xmhyp42higayh95yvllh1rcs264lmw3yh4")))) + "16grzja9hz5mqpfzbp1r6zif1gp7swfadkm52340si9h8ifhk8b6")))) (build-system r-build-system) (propagated-inputs (list r-backports @@ -5538,14 +5586,14 @@ models.") (define-public r-pdist (package (name "r-pdist") - (version "1.2") + (version "1.2.1") (source (origin (method url-fetch) (uri (cran-uri "pdist" version)) (sha256 (base32 - "18nd3mgad11f2zmwcp0w3sxlch4a9y6wp8dfdyzvjn7y4b4bq0dd")))) + "0bvg8si81hs79v39d7svv4zbv2p0sk2r6m9vamibvkh9qvl4x406")))) (build-system r-build-system) (home-page "https://github.com/jeffwong/pdist") (synopsis "Partitioned distance function") @@ -5907,14 +5955,14 @@ programming} (SQP) based solver).") (define-public r-hardyweinberg (package (name "r-hardyweinberg") - (version "1.7.4") + (version "1.7.5") (source (origin (method url-fetch) (uri (cran-uri "HardyWeinberg" version)) (sha256 (base32 - "11y3zg8aqxk5xdzsv7i3bgqkky6a0wgf2n8saa3a4adq75k328ib")))) + "0b3szw090dsc3bkas2kvx787ww2i6zzg2qmdyivmqc8amx5arn6g")))) (properties `((upstream-name . "HardyWeinberg"))) (build-system r-build-system) (propagated-inputs @@ -5959,13 +6007,13 @@ and density estimation") (define-public r-venndiagram (package (name "r-venndiagram") - (version "1.7.1") + (version "1.7.3") (source (origin (method url-fetch) (uri (cran-uri "VennDiagram" version)) (sha256 (base32 - "0yw54j9as0vf8ypnq4a3sl2w0lajri6s979f4y11hjzpgmr1m16b")))) + "0ilcxcp8qskmb5cp7fyb7i0qizg42lrx0ny8ws3if90kfrglghp7")))) (properties `((upstream-name . "VennDiagram"))) (build-system r-build-system) (propagated-inputs @@ -6293,14 +6341,14 @@ plots in @code{ggplot2}.") (define-public r-cli (package (name "r-cli") - (version "3.2.0") + (version "3.3.0") (source (origin (method url-fetch) (uri (cran-uri "cli" version)) (sha256 (base32 - "0qp8k1afrn6ppwi6d9n05fjgj02196qcsppji3q37ph99msinnnd")))) + "0qqd4mscv8ndjbji7knprdlv2hhyk35gazagvapbjzq1p6yfpaf3")))) (build-system r-build-system) (propagated-inputs (list r-glue)) @@ -6442,14 +6490,14 @@ of merit, ordering functions, and enhanced versions of @code{pairs} and (define-public r-webshot (package (name "r-webshot") - (version "0.5.2") + (version "0.5.3") (source (origin (method url-fetch) (uri (cran-uri "webshot" version)) (sha256 (base32 - "0gq4h8cw51z95yvsnf38kj5l58wgljkm0dalmi8mn1sp06bxr0zi")))) + "1h6v94zwq0ypgi4vf8xlhp5k13j7f9061hx908177i68c6zg5i5p")))) (build-system r-build-system) (propagated-inputs (list r-callr r-jsonlite r-magrittr)) @@ -6497,13 +6545,13 @@ iVAT).") (define-public r-xfun (package (name "r-xfun") - (version "0.30") + (version "0.31") (source (origin (method url-fetch) (uri (cran-uri "xfun" version)) (sha256 - (base32 "1vn0cbskyrk8ww9yx75jni9s684yv4cvbj643lvg0lg00briry7b")))) + (base32 "0dgjkrlwl6rxmvdn6s1xrbiaa53hkfx2s7rqrbrc7c6shbkg6sfi")))) (build-system r-build-system) ;; knitr itself depends on xfun #; @@ -6584,14 +6632,14 @@ estimated from a given sample.") (define-public r-vctrs (package (name "r-vctrs") - (version "0.4.0") + (version "0.4.1") (source (origin (method url-fetch) (uri (cran-uri "vctrs" version)) (sha256 (base32 - "0bslr22jnnwxx45s1a19az6saqf2svi8vkjf64pnpc6rma4ygpl9")))) + "1pb0wjpwix29q8d8p3wi72a9mp9mif7369pk31w238cs00g8hxln")))) (build-system r-build-system) (propagated-inputs (list r-cli r-glue r-rlang)) @@ -6671,14 +6719,14 @@ packages that work with genomic data.") (define-public r-uuid (package (name "r-uuid") - (version "1.0-4") + (version "1.1-0") (source (origin (method url-fetch) (uri (cran-uri "uuid" version)) (sha256 (base32 - "08j3ylf49l9qslhlcxvix3mqw6hh8kxainnklv0qmwmwj6q6i5i8")))) + "0bzlc2knmr338h4ykx8v8c2a1inizxafj8rh13kwii68gpp50nz7")))) (build-system r-build-system) (home-page "https://www.rforge.net/uuid") (synopsis "Tools for generating and handling of UUIDs") @@ -6690,14 +6738,14 @@ packages that work with genomic data.") (define-public r-tinytex (package (name "r-tinytex") - (version "0.38") + (version "0.39") (source (origin (method url-fetch) (uri (cran-uri "tinytex" version)) (sha256 (base32 - "11hww4x4q44xg559gplmjc6hmzmap0w249nnzyw5dy2ys30bbhga")))) + "1v95pjxdq0ma90jji5yqh8ihlcf35cmrqx9v0z649zh0q9vrnbpj")))) (build-system r-build-system) (propagated-inputs (list r-xfun)) @@ -6749,14 +6797,14 @@ features: (define-public r-network (package (name "r-network") - (version "1.17.1") + (version "1.17.2") (source (origin (method url-fetch) (uri (cran-uri "network" version)) (sha256 (base32 - "19q563v5xfkbmr0ws9nhqx4wrxkf9jsck51rqc8mm2gq2h03lg7w")))) + "1xrhzbci7ls4h05skdlirxl49jsvmylrqivz2kd6i33wh2ca324m")))) (build-system r-build-system) (propagated-inputs (list r-magrittr r-statnet-common r-tibble)) @@ -6818,14 +6866,14 @@ vectors.") (define-public r-statnet-common (package (name "r-statnet-common") - (version "4.5.0") + (version "4.6.0") (source (origin (method url-fetch) (uri (cran-uri "statnet.common" version)) (sha256 (base32 - "0bw8dwnv568i60xrj6d7gv0hnna1x7rvqaayy5i0827khvdj7nrw")))) + "07djgc6qbxahiy5v15lfayxbj4188lxsb8xcs7hnbm2hic953bfx")))) (properties `((upstream-name . "statnet.common"))) (build-system r-build-system) @@ -7235,14 +7283,14 @@ Fisher's method), and Sidak correction.") (define-public r-quantmod (package (name "r-quantmod") - (version "0.4.18") + (version "0.4.20") (source (origin (method url-fetch) (uri (cran-uri "quantmod" version)) (sha256 (base32 - "0dbcrncv06iqcbkky95dd7l32xq0hhbnkb0kj8wwzym1jf748h5a")))) + "154fqhw46kc7r08zsj5fsg97hg93phsli3z14xwmz22xb50xymzp")))) (build-system r-build-system) (propagated-inputs (list r-curl r-ttr r-xts r-zoo)) @@ -7256,14 +7304,14 @@ financial trading strategies.") (define-public r-tseries (package (name "r-tseries") - (version "0.10-50") + (version "0.10-51") (source (origin (method url-fetch) (uri (cran-uri "tseries" version)) (sha256 (base32 - "16654v691jqpgiisz442h9znlxgj96c9gvhk3pgmm48bfsxs6iqw")))) + "0zr09ikaz96djcvnjbr8ah6waqzjy06f4yd4isshlwc391q20px5")))) (build-system r-build-system) (propagated-inputs (list r-quadprog r-quantmod r-zoo)) @@ -7702,14 +7750,14 @@ Memorial-Sloan-Kettering Cancer Center (MSKCC).") (define-public r-import (package (name "r-import") - (version "1.2.0") + (version "1.3.0") (source (origin (method url-fetch) (uri (cran-uri "import" version)) (sha256 (base32 - "018s0x224gqnv4cjfh0fwliyfg6ma9vslmwybrlizfsmqcc5wp37")))) + "19g4jnfg9pkvvsncw62yc15xlb97hfbdqxivpjd9jqi36i6mdjrg")))) (build-system r-build-system) (native-inputs (list r-knitr)) @@ -7728,14 +7776,14 @@ files.") (define-public r-shinyace (package (name "r-shinyace") - (version "0.4.1") + (version "0.4.2") (source (origin (method url-fetch) (uri (cran-uri "shinyAce" version)) (sha256 (base32 - "1m33dfm2kjirvgix7ybv1kbzgjkicdpv411g9c0q3fw6rnyhfxxn")))) + "12mqvdh6rxsr61pc3pzla95r5f4l7xagjs2rcdr7c2lbqyxpx6aa")))) (properties `((upstream-name . "shinyAce"))) (build-system r-build-system) (propagated-inputs @@ -7819,14 +7867,14 @@ systems.") (define-public r-radiant-data (package (name "r-radiant-data") - (version "1.4.1") + (version "1.4.2") (source (origin (method url-fetch) (uri (cran-uri "radiant.data" version)) (sha256 (base32 - "12x4nz5n6yz1a67ji79pwvznp9flmn50hpp9y9sfhixir7dvwy27")) + "0c5c99q13pwv6k0b07x3r2bxmh0h2w15h02xb1pincgs61qwi15k")) (modules '((guix build utils))) (snippet '(begin @@ -7880,13 +7928,13 @@ the application.") (define-public r-algdesign (package (name "r-algdesign") - (version "1.2.0") + (version "1.2.1") (source (origin (method url-fetch) (uri (cran-uri "AlgDesign" version)) (sha256 - (base32 "0ammlg148gk0p24fh700116nd66636np0jb1wwh0axq5jphwk1pz")))) + (base32 "01cx63wqr6yvgl5ml1lj6gh9p1sn42b6qcnsppcw7mvba9n652ar")))) (properties `((upstream-name . "AlgDesign"))) (build-system r-build-system) (home-page "https://github.com/jvbraun/AlgDesign") @@ -8086,14 +8134,14 @@ multivariate plot methods.") (define-public r-fnn (package (name "r-fnn") - (version "1.1.3") + (version "1.1.3.1") (source (origin (method url-fetch) (uri (cran-uri "FNN" version)) (sha256 (base32 - "0cllqlnynm5yaj4r64mqyyfc8phkb38rwssq8k8ikgfgr4jklxny")))) + "0nmynpiy3d2dnd5ngjf4m79jy02byhk43gj0xny9a6j8243f5c2j")))) (properties `((upstream-name . "FNN"))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/FNN") @@ -8310,14 +8358,14 @@ goodness-of-fit.") (define-public r-abc (package (name "r-abc") - (version "2.1") + (version "2.2.1") (source (origin (method url-fetch) (uri (cran-uri "abc" version)) (sha256 (base32 - "0ngzaaz2y2s03fhngvwipmy4kq38xrmyddaz6a6l858rxvadrlhb")))) + "16753lyzk2dfwgdjfyanwacqw3bvrwby52inq4709804labs6lnv")))) (build-system r-build-system) (propagated-inputs (list r-abc-data r-locfit r-mass r-nnet r-quantreg)) @@ -8416,14 +8464,14 @@ simple method for converting between file types.") (define-public r-maptools (package (name "r-maptools") - (version "1.1-3") + (version "1.1-4") (source (origin (method url-fetch) (uri (cran-uri "maptools" version)) (sha256 (base32 - "0ixvh4qbdjjl19ghgbb2r26yksya977q1yzs4yn5wshwm0763xph")))) + "1jgx8iiirj8qhrmh19mkisa35jcql7352dmc7lvwi5vxg3wjbvpk")))) (build-system r-build-system) (propagated-inputs (list r-foreign r-lattice r-sp)) @@ -8858,14 +8906,14 @@ those searches and pull data into their R sessions.") (define-public r-renv (package (name "r-renv") - (version "0.15.4") + (version "0.15.5") (source (origin (method url-fetch) (uri (cran-uri "renv" version)) (sha256 (base32 - "0byfs4cydhyqzdrxjv7sa6i30xc7qhnx0qw9d8wwwlzdkv235flf")))) + "0bjq3ms5dg155clya62m462m93g90sxfxm7b4cqhqbx8vakskwdl")))) (properties `((upstream-name . "renv"))) (build-system r-build-system) (native-inputs @@ -8975,14 +9023,14 @@ always locate the files relative to your project root.") (define-public r-reticulate (package (name "r-reticulate") - (version "1.24") + (version "1.25") (source (origin (method url-fetch) (uri (cran-uri "reticulate" version)) (sha256 (base32 - "1k0nv43fa9lx44pamxpprnvvmsp15adn5z6hg9siyq0n94hca65r")))) + "0b1szzsqyc8wcfpkn5517bb1ds064vs2hky71my3p74kfngay991")))) (build-system r-build-system) (inputs (list python)) (propagated-inputs @@ -9375,14 +9423,14 @@ that account for the effects of ANSI text formatting control sequences.") (define-public r-nbclust (package (name "r-nbclust") - (version "3.0") + (version "3.0.1") (source (origin (method url-fetch) (uri (cran-uri "NbClust" version)) (sha256 (base32 - "1vwb48zy6ln1ddpqmfngii1i80n8qmqyxnzdp6gbaq96lakl3w3c")))) + "0k5hr4zgx4gp1n62xchgz2zvyl35ba2cnczhhvj8rfbg2n4hx6qs")))) (properties `((upstream-name . "NbClust"))) (build-system r-build-system) (home-page "https://sites.google.com/site/malikacharrad/research/nbclust-package") @@ -9549,14 +9597,14 @@ functions.") (define-public r-rjags (package (name "r-rjags") - (version "4-12") + (version "4-13") (source (origin (method url-fetch) (uri (cran-uri "rjags" version)) (sha256 (base32 - "041y4zfr50y96g0kl857jcba0a3gpdpk8qfn9fj8zxzbz71k87xr")))) + "0cibz6xhmh86fh7ynmdgpmlchizi57pi6dpslgc2if17a56c6p7q")))) (build-system r-build-system) (propagated-inputs (list r-coda)) @@ -9839,14 +9887,14 @@ other add-on packages.") (define-public r-insight (package (name "r-insight") - (version "0.17.0") + (version "0.17.1") (source (origin (method url-fetch) (uri (cran-uri "insight" version)) (sha256 (base32 - "1rxcy8nyg3y50czm3y1x2pibivywcb1bjmvpyqlzg4yy2j84v69p")))) + "0dffrsimgijdqsgvr9cad4g4w97d5ssjl3l0fm5ssly9l115ag35")))) (build-system r-build-system) (native-inputs (list r-knitr)) @@ -10124,14 +10172,14 @@ matches version and feature constraints.") (define-public r-argparse (package (name "r-argparse") - (version "2.1.3") + (version "2.1.5") (source (origin (method url-fetch) (uri (cran-uri "argparse" version)) (sha256 (base32 - "0vm6nrzl6rsq2qw3km3i4s92kq9phs3cbxzv3i8hlyld9ajk3nmf")))) + "13b5halfxc7nr57vkz3qmkkcpw1hr4xdk1mjh2cq8cvpnjz15qc3")))) (build-system r-build-system) (inputs (list python)) (propagated-inputs @@ -10218,14 +10266,14 @@ the work.") (define-public r-doby (package (name "r-doby") - (version "4.6.12") + (version "4.6.13") (source (origin (method url-fetch) (uri (cran-uri "doBy" version)) (sha256 (base32 - "1m60ya4cdickqsj0dc90bv4n47df6qg6n82fikxrkl4yhg7yyn1i")))) + "0qnfcw4rg5kd1mll3rq6vchz3lgdqfif9469p8x6ixsgrxxpivbz")))) (properties `((upstream-name . "doBy"))) (build-system r-build-system) (propagated-inputs @@ -10529,14 +10577,14 @@ from the @code{stats} package (plus some extra parameters).") (define-public r-cmplot (package (name "r-cmplot") - (version "4.0.0") + (version "4.1.0") (source (origin (method url-fetch) (uri (cran-uri "CMplot" version)) (sha256 (base32 - "0xyh75y0c84nnkrv6c8xrvla54w51phgdwn8a69799f2r87z7c81")))) + "1h09prpiw7l32mr7jarp8ddrddg1431nfn4kw3bznfnv0sr78zfg")))) (properties `((upstream-name . "CMplot"))) (build-system r-build-system) (home-page "https://github.com/YinLiLin/CMplot") @@ -10859,14 +10907,14 @@ a library of prediction algorithms to be used in the super learner.") (define-public r-drtmle (package (name "r-drtmle") - (version "1.1.0") + (version "1.1.1") (source (origin (method url-fetch) (uri (cran-uri "drtmle" version)) (sha256 (base32 - "08a6k0nrg6mqdslwjc71583x52vnax87nbfalk98zczwvrrdwvxa")))) + "12vplpz9bg5444jy29mbdr70hqby073vb3iw76v2csrwy3ws3f21")))) (properties `((upstream-name . "drtmle"))) (build-system r-build-system) (propagated-inputs @@ -10884,14 +10932,14 @@ both to consistency and asymptotic normality.") (define-public r-dofuture (package (name "r-dofuture") - (version "0.12.1") + (version "0.12.2") (source (origin (method url-fetch) (uri (cran-uri "doFuture" version)) (sha256 (base32 - "0fhk32ih9cbwxw3mvkddqjv0dsaw9xk8qjdslfcabvmixhnh3s6m")))) + "0w07pmzpsfq4kvfc745s1i9b6dfn1df1wrfi4s9ys4ir3g2s8nk1")))) (properties `((upstream-name . "doFuture"))) (build-system r-build-system) (arguments @@ -10995,14 +11043,14 @@ subsequence} (LCS) using a dynamic programming algorithm.") (define-public r-labelled (package (name "r-labelled") - (version "2.9.0") + (version "2.9.1") (source (origin (method url-fetch) (uri (cran-uri "labelled" version)) (sha256 (base32 - "0ffnhlr239nqcwb35m4hll21abnnhpmyy5wlxnyahrg0kqb0xb1n")))) + "0h7scbyzh7kr51gds222rkhld2b3k36s86hj8rrzpwv4bwj0pccy")))) (properties `((upstream-name . "labelled"))) (build-system r-build-system) (propagated-inputs @@ -11189,13 +11237,13 @@ calls to the particular toolkits in use in function of the context.") (define-public r-svdialogs (package (name "r-svdialogs") - (version "1.0.3") + (version "1.1.0") (source (origin (method url-fetch) (uri (cran-uri "svDialogs" version)) (sha256 - (base32 "0j00xjvkwv992ir48czhvyj29rb9vpd243vbyyj2binn0q0qa431")))) + (base32 "0z3a5glsi0ab43mdk2yvslxyzg12nbqqqc35jvgzj475mpkbgjif")))) (properties `((upstream-name . "svDialogs"))) (build-system r-build-system) (inputs @@ -11282,18 +11330,17 @@ genotypes as \"graphical genotypes\".") (define-public r-furrr (package (name "r-furrr") - (version "0.2.3") + (version "0.3.0") (source (origin (method url-fetch) (uri (cran-uri "furrr" version)) (sha256 (base32 - "001p2yhznrpnrjvdcmf2h3wpgdnw01wnqgid7wbq8bhavhi3888a")))) + "117xj66l14r08macwghgyibzm282ljv1afpa133h952gc70irs9z")))) (build-system r-build-system) (propagated-inputs - (list r-ellipsis - r-future + (list r-future r-globals r-lifecycle r-purrr @@ -12052,14 +12099,14 @@ cross-sectional, time series, clustered, panel, and longitudinal data.") (define-public r-th-data (package (name "r-th-data") - (version "1.1-0") + (version "1.1-1") (source (origin (method url-fetch) (uri (cran-uri "TH.data" version)) (sha256 (base32 - "0ghihfpk5d8gsdlzf6phw7dwwz3adx64pxk82vlmlqx53ljpxcr1")))) + "0ynxacnz002bjsp2ybql7rdqw4zd14af8r7w44nwbx22n4bapwzd")))) (properties `((upstream-name . "TH.data"))) (build-system r-build-system) (propagated-inputs @@ -12076,14 +12123,14 @@ packages maintained by Torsten Hothorn.") (define-public r-multcomp (package (name "r-multcomp") - (version "1.4-18") + (version "1.4-19") (source (origin (method url-fetch) (uri (cran-uri "multcomp" version)) (sha256 (base32 - "01i8gjppyxl3xph1dw0kags8qbb7r06j91kk3lkqn5gzrxjmwyhh")))) + "0mz5wdqrqpp2gqijfpp9rgfbq8yvxki4is8fbbc4qwdwryqp6d7h")))) (build-system r-build-system) (propagated-inputs (list r-codetools r-mvtnorm r-sandwich r-survival r-th-data)) @@ -12121,14 +12168,14 @@ the differences were not significantly different.") (define-public r-emmeans (package (name "r-emmeans") - (version "1.7.3") + (version "1.7.4-1") (source (origin (method url-fetch) (uri (cran-uri "emmeans" version)) (sha256 (base32 - "0kbbin3zfxqkm5awq4331fv7y2kfpdhkwrqh91prl7qpf8kscin6")))) + "08g7ifqhwqa00hc850nwx03dp7isz0281ig6kvixc4xdahmkm8zp")))) (build-system r-build-system) (propagated-inputs (list r-estimability r-mvtnorm r-numderiv r-xtable)) @@ -12250,14 +12297,14 @@ Bayesian modeling.") (define-public r-tmb (package (name "r-tmb") - (version "1.8.1") + (version "1.9.0") (source (origin (method url-fetch) (uri (cran-uri "TMB" version)) (sha256 (base32 - "1hzvvx1g5nkmiqwzihj8nir48k7idbw1jvb14ldjk9rsikgpywdl")))) + "1mr5vwamw6ag1fhd83jyy6015296908qwshwq0fcphhiv60x579c")))) (properties `((upstream-name . "TMB"))) (build-system r-build-system) (propagated-inputs @@ -12353,14 +12400,14 @@ differentiation.") (define-public r-bayestestr (package (name "r-bayestestr") - (version "0.11.5") + (version "0.12.1") (source (origin (method url-fetch) (uri (cran-uri "bayestestR" version)) (sha256 (base32 - "0lz8mzacxgmll576p88654mrvlk4pzvhwwghvn5pm7zxisgx0kq0")))) + "1fbkpagc5zznrafy7h68nhx43a1yg4v7242pbqjkd0h2481c101z")))) (properties `((upstream-name . "bayestestR"))) (build-system r-build-system) (propagated-inputs @@ -12434,14 +12481,14 @@ results using @code{ggplot2}.") (define-public r-effectsize (package (name "r-effectsize") - (version "0.6.0.1") + (version "0.7.0") (source (origin (method url-fetch) (uri (cran-uri "effectsize" version)) (sha256 (base32 - "1rhpbhyrv0avinm6dz6v2qw4xxdl9m1wknq1dv2flfxgcz0k9qiz")))) + "07dbj7n9vwjkb7xrdj224lzc3ppr3jjdgyyilkj7gpkvgjgfrqhz")))) (properties `((upstream-name . "effectsize"))) (build-system r-build-system) (propagated-inputs @@ -12723,14 +12770,14 @@ User credentials are shared with command line git through the (define-public r-usethis (package (name "r-usethis") - (version "2.1.5") + (version "2.1.6") (source (origin (method url-fetch) (uri (cran-uri "usethis" version)) (sha256 (base32 - "0lph2rxv7nq3h022gp8d50wbq5lwicnx85d2l5dx876wxhb9wlvx")))) + "0638dzl4nm4c36990sf2biy74hjr2fzlqzfb98fsqrbhaw3ngp1i")))) (build-system r-build-system) (propagated-inputs (list r-cli @@ -12911,14 +12958,14 @@ ways.") (define-public r-summarytools (package (name "r-summarytools") - (version "1.0.0") + (version "1.0.1") (source (origin (method url-fetch) (uri (cran-uri "summarytools" version)) (sha256 (base32 - "04qcysfywljnqkcz2b7kzpy0xv3ykkvvb14vnda63z1wvmadyhkn")))) + "0gr95cd1ja8di6s0xghk6w7nj3bh3z4g7j7ixdy7f88q681aixgx")))) (build-system r-build-system) (propagated-inputs (list r-base64enc @@ -13082,14 +13129,14 @@ analysing multivariate abundance data in community ecology.") (define-public r-afex (package (name "r-afex") - (version "1.1-0") + (version "1.1-1") (source (origin (method url-fetch) (uri (cran-uri "afex" version)) (sha256 (base32 - "0h8zqv82dqll19l3p89a2csvgnx8ayb2bajq7b35a8svhj427zax")))) + "09q426s2zmzxx5ilxy0x5mflpb38pl075ss1s8xvpswkn6cia0b6")))) (build-system r-build-system) ;; This is needed for the vignette builder (arguments @@ -13373,13 +13420,13 @@ netCDF files.") (define-public r-biocmanager (package (name "r-biocmanager") - (version "1.30.16") + (version "1.30.18") (source (origin (method url-fetch) (uri (cran-uri "BiocManager" version)) (sha256 - (base32 "0m9qxwqajg8lp0z06blbpgk3zw0z73aly1cvmjk6mvwja6jm99vm")))) + (base32 "0dawbd546rznllpw5wq282r0viga4cck398d4s1inkk18mmi4qzp")))) (properties `((upstream-name . "BiocManager"))) (build-system r-build-system) (native-inputs @@ -13394,14 +13441,14 @@ Bioconductor packages.") (define-public r-rgl (package (name "r-rgl") - (version "0.108.3") + (version "0.108.3.2") (source (origin (method url-fetch) (uri (cran-uri "rgl" version)) (sha256 (base32 - "0fqkx079z9y5b1gdg6qfz2wpw2j8q3ddflfkd9wwrkyacas6xyc9")))) + "0r9wzhjzl346i37ngs6hqzmizhi53kzqz582lv822v6yxang6fh3")))) (build-system r-build-system) (native-inputs (list pkg-config r-knitr)) @@ -13475,13 +13522,13 @@ isosurfaces.") (define-public r-ks (package (name "r-ks") - (version "1.13.4") + (version "1.13.5") (source (origin (method url-fetch) (uri (cran-uri "ks" version)) (sha256 - (base32 "15sm1ys7sk0gn7hr1vik4xrn4jdf837knwk7j8h32lr29w9mh917")))) + (base32 "05bqrjkbx2kn5aax0hy3xd6pf7nxka9bm1sp8ll1cc2gf1nx1i6i")))) (build-system r-build-system) (propagated-inputs (list r-fnn @@ -13560,14 +13607,14 @@ University Press, 2007.") (define-public r-circular (package (name "r-circular") - (version "0.4-94") + (version "0.4-95") (source (origin (method url-fetch) (uri (cran-uri "circular" version)) (sha256 (base32 - "0wanbd6n7g1avvyc7pm0lnkwg868dix2byiz4wm6vmxzm0y47fmr")))) + "1qmwj1pf37lc2s5r83y7nqckscznqhbsv66bdfgfbby7x4qkwga8")))) (build-system r-build-system) (propagated-inputs (list r-boot r-mvtnorm)) @@ -13584,17 +13631,17 @@ Scientific.") (define-public r-activity (package (name "r-activity") - (version "1.3.1") + (version "1.3.2") (source (origin (method url-fetch) (uri (cran-uri "activity" version)) (sha256 (base32 - "1wn2a0hx7wfr2jyj1b772w5fgl6bcqkkw8cybais2s1wyjx8kjr5")))) + "11n6wmqz7p3428rr615f92m61a5gb908xpn4l8q484h61bwg38c3")))) (build-system r-build-system) (propagated-inputs - (list r-circular r-insol r-pbapply)) + (list r-insol r-pbapply)) (home-page "https://cran.r-project.org/web/packages/activity/") (synopsis "Animal activity statistics") (description @@ -13608,14 +13655,14 @@ circular variables).") (define-public r-ouch (package (name "r-ouch") - (version "2.17") + (version "2.18") (source (origin (method url-fetch) (uri (cran-uri "ouch" version)) (sha256 (base32 - "1a7r24j59xz3lxa5wc694j6b80j8m5l86zd1sw9pvs66l8gd98kf")))) + "119s9llpjy0b4q830xig2xr66fq6izp6mr2k4k79ggmf3gxww8as")))) (build-system r-build-system) (propagated-inputs (list r-subplex)) (home-page "https://kingaa.github.io/ouch/") @@ -13712,13 +13759,13 @@ Anderson-Darling Distribution\".") (define-public r-admisc (package (name "r-admisc") - (version "0.26") + (version "0.27") (source (origin (method url-fetch) (uri (cran-uri "admisc" version)) (sha256 - (base32 "19zkwyp8gvq8f74midmwld4azx44sbqxqx9mgs726i6dhnls6821")))) + (base32 "07hfrhv3pcldsffnyfzpa1q3x32gxr1386r8fik1nhql2w46mm13")))) (properties `((upstream-name . "admisc"))) (build-system r-build-system) (home-page "https://github.com/dusadrian/admisc") @@ -13933,14 +13980,14 @@ over-plotting in scatter plots with text.") (define-public r-colorramps (package (name "r-colorramps") - (version "2.3") + (version "2.3.1") (source (origin (method url-fetch) (uri (cran-uri "colorRamps" version)) (sha256 (base32 - "0shbjh83x1axv4drm5r3dwgbyv70idih8z4wlzjs4hiac2qfl41z")))) + "12jnkj50yh2hc5l7j56lrrrmn58akrj9dwj98vzf42iq4h42kwb1")))) (properties `((upstream-name . "colorRamps"))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/colorRamps") @@ -14191,18 +14238,20 @@ definiteness of a matrix.") (define-public r-rspectra (package (name "r-rspectra") - (version "0.16-0") + (version "0.16-1") (source (origin (method url-fetch) (uri (cran-uri "RSpectra" version)) (sha256 (base32 - "1ab45as2ysjrvkhvmx7y3nbhd0y1w4j9k2a789lcd973zz4wzwda")))) + "16ij84wgpsmqmnxqiii8dgihy3bfxazry9znmckhwzba7m0d79fb")))) (properties `((upstream-name . "RSpectra"))) (build-system r-build-system) (propagated-inputs (list r-matrix r-rcpp r-rcppeigen)) + (native-inputs + (list r-knitr)) (home-page "https://github.com/yixuan/RSpectra") (synopsis "Solvers for large-scale Eigenvalue and SVD problems") (description @@ -14238,14 +14287,14 @@ diagnostics for controlling type-1 errors are also provided.") (define-public r-flare (package (name "r-flare") - (version "1.7.0") + (version "1.7.0.1") (source (origin (method url-fetch) (uri (cran-uri "flare" version)) (sha256 (base32 - "0f992dmgnr6s8g3386i9bjfyf08q8srgw7sjz2yx7snj8znq7251")))) + "1xvrbvq2y7zfp98ijal3z8y1w2xbzfcdykzw4pqc3mnh0qrhq2d5")))) (build-system r-build-system) (propagated-inputs (list r-igraph r-lattice r-mass r-matrix)) @@ -14379,13 +14428,13 @@ methods, incorporating one or more trees and trait data.") (define-public r-rnexml (package (name "r-rnexml") - (version "2.4.6") + (version "2.4.7") (source (origin (method url-fetch) (uri (cran-uri "RNeXML" version)) (sha256 (base32 - "0k56brcg80mvx35hgc5gj8arwba4k7q0075g38qp0qgq9d1b87cs")))) + "1zp6pijsc73jx8cmxb1hng36nvaf5wnhldnzlqhmba9kv9niscfb")))) (build-system r-build-system) (propagated-inputs (list r-ape @@ -14929,14 +14978,14 @@ want to include run-time testing features in their own packages.") (define-public r-assertive-properties (package (name "r-assertive-properties") - (version "0.0-4") + (version "0.0-5") (source (origin (method url-fetch) (uri (cran-uri "assertive.properties" version)) (sha256 (base32 - "0sqs54acs9qk9kvm32rxzfbzxz1l8mjahpfnw7r30z2brgz661jw")))) + "1pgljbwwbvbl4kc5c8mcv0qbzq3k6fzi29k88811yml263sm92dn")))) (properties `((upstream-name . "assertive.properties"))) (build-system r-build-system) @@ -15390,14 +15439,14 @@ covariance functions for large data sets.") (define-public r-spatialextremes (package (name "r-spatialextremes") - (version "2.0-9") + (version "2.1-0") (source (origin (method url-fetch) (uri (cran-uri "SpatialExtremes" version)) (sha256 (base32 - "1mhn1c8n3bmgf0fjyac3wji4790zswzkqliqcv3n8kv9806crb0y")))) + "0z1swxp1syz8hdskarjxx4sdd7wx835kcnb783bwqm235yh991j3")))) (properties `((upstream-name . "SpatialExtremes"))) (build-system r-build-system) @@ -15666,14 +15715,14 @@ model with finite state space using the Aalen-Johansen estimator.") (define-public r-epi (package (name "r-epi") - (version "2.44") + (version "2.46") (source (origin (method url-fetch) (uri (cran-uri "Epi" version)) (sha256 (base32 - "1wcxr1f7irgfdwzz4vf67114yhxrhxxxnhy4hfaww0zy91vzxx10")))) + "0s3ij0rya4wd7k97kc4s3pwj1d1ypaxl1s7zqr6sa07hp4a8fzz0")))) (properties `((upstream-name . "Epi"))) (build-system r-build-system) (propagated-inputs @@ -15681,12 +15730,12 @@ model with finite state space using the Aalen-Johansen estimator.") r-data-table r-dplyr r-etm + r-magrittr r-mass r-matrix r-mgcv r-numderiv r-plyr - r-purrr r-survival r-zoo)) (home-page "https://BendixCarstensen.com/Epi/") @@ -15823,14 +15872,14 @@ subsetting.") (define-public r-globals (package (name "r-globals") - (version "0.14.0") + (version "0.15.0") (source (origin (method url-fetch) (uri (cran-uri "globals" version)) (sha256 (base32 - "1wrjiiif6rpc268zz79pvpw33si6n6ffgxdnxmmcracwhb5vqg90")))) + "15llx4233ihj4w815k7inc17530w9ja0mi29n1i0s2sr42j8jdpq")))) (build-system r-build-system) (propagated-inputs (list r-codetools)) @@ -15847,14 +15896,14 @@ them in distributed compute environments.") (define-public r-parallelly (package (name "r-parallelly") - (version "1.31.0") + (version "1.31.1") (source (origin (method url-fetch) (uri (cran-uri "parallelly" version)) (sha256 (base32 - "0kjwxgxnlpjbxpr1dyzk3nyx9fwa6vwqr22bvsxz56xwxnirzdxx")))) + "1nhp66psk3m79is5qm4ppxkj7bdy46jr2h2pir22ia9ghhyzris0")))) (properties `((upstream-name . "parallelly"))) (build-system r-build-system) (home-page "https://github.com/HenrikBengtsson/parallelly") @@ -15875,14 +15924,14 @@ port-forwarding to your local computer.") (define-public r-future (package (name "r-future") - (version "1.24.0") + (version "1.26.1") (source (origin (method url-fetch) (uri (cran-uri "future" version)) (sha256 (base32 - "0xmj17fq9paww796490bmakv6pcvrzk15i8mzhxk1mp9l0mj32vv")))) + "1mchjdvvwgs8v0iv8z5m6gav3xzvnq11h8qrc7lfnrb2x3d0np53")))) (build-system r-build-system) (arguments `(#:phases @@ -15910,14 +15959,14 @@ the local machine to, say, distributed processing on a remote compute cluster.") (define-public r-future-apply (package (name "r-future-apply") - (version "1.8.1") + (version "1.9.0") (source (origin (method url-fetch) (uri (cran-uri "future.apply" version)) (sha256 (base32 - "1ix61bfbk43pwnjb0wk8lkfgdsy5zi8svk74gar5nrl90b5w6nqd")))) + "1xb7qj8izjwmy4aa92p5f4cdbhgp220hrly3b5879f9hrv2w2rk1")))) (properties `((upstream-name . "future.apply"))) (build-system r-build-system) (arguments @@ -16093,14 +16142,14 @@ several common set, element and attribute related tasks.") (define-public r-shinybs (package (name "r-shinybs") - (version "0.61") + (version "0.61.1") (source (origin (method url-fetch) (uri (cran-uri "shinyBS" version)) (sha256 (base32 - "0rhim4mbp4x9vvm7xkmpl7mhb9qd1gr96cr4dv330v863ra2kgji")))) + "0h51685a9qll4agayldjyryi60ih969219ibg071slv0613p5v8a")))) (properties `((upstream-name . "shinyBS"))) (build-system r-build-system) ;; The tests spawn Shiny browser apps. They cannot be run @@ -16531,14 +16580,14 @@ marginal histograms/boxplots/density plots to ggplot2 scatterplots.") (define-public r-minpack-lm (package (name "r-minpack-lm") - (version "1.2-1") + (version "1.2-2") (source (origin (method url-fetch) (uri (cran-uri "minpack.lm" version)) (sha256 (base32 - "18ym2pdql5vzngc7q5gn66d153hrfrnd8ilv8yh6vd7j7sx7vjql")))) + "11yz6hk2r33571d16kq01cb1x6sgdzi6jmksqlrm8mr84l95c2f7")))) (properties `((upstream-name . "minpack.lm"))) (build-system r-build-system) (native-inputs (list gfortran)) @@ -16555,14 +16604,14 @@ for lower and upper parameter bounds. The implementation can be used via (define-public r-moments (package (name "r-moments") - (version "0.14") + (version "0.14.1") (source (origin (method url-fetch) (uri (cran-uri "moments" version)) (sha256 (base32 - "0f9y58w1hxcz4bqivirx25ywlmc80gbi6dfx5cnhkpdg1pk82fra")))) + "0r6qf3i1rzh2822bx1p0h8mh91gsbgg6asl2rzh2l4ys094bilif")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/moments") (synopsis "Moments, cumulants, skewness, kurtosis and related tests") @@ -16666,14 +16715,14 @@ obtain confidence intervals associated with AIC and BIC.") (define-public r-penalized (package (name "r-penalized") - (version "0.9-51") + (version "0.9-52") (source (origin (method url-fetch) (uri (cran-uri "penalized" version)) (sha256 (base32 - "1zcrwa93mc27qj3g4ayc2k895r6g8q0g6qb2azmvj7wqk750va7a")))) + "08badmgygppbqzay20qijyww028yw6s8dyd8ijcp8g4r9rn8xqyq")))) (build-system r-build-system) (propagated-inputs (list r-rcpp r-rcpparmadillo r-survival)) @@ -16884,14 +16933,14 @@ network.") (define-public r-gmodels (package (name "r-gmodels") - (version "2.18.1") + (version "2.18.1.1") (source (origin (method url-fetch) (uri (cran-uri "gmodels" version)) (sha256 (base32 - "0s8kd8krqk4kwv2zqxpsfy3w8qdwf5naf4b5l383vidq9sil0qb2")))) + "158y7yh4maawn9vki8cq4sil48xib2bbpl6qgj5gvlkw3c14hzfs")))) (build-system r-build-system) (propagated-inputs (list r-gdata r-mass)) @@ -17239,14 +17288,14 @@ barplots or heatmaps.") (define-public r-seqinr (package (name "r-seqinr") - (version "4.2-8") + (version "4.2-16") (source (origin (method url-fetch) (uri (cran-uri "seqinr" version)) (sha256 (base32 - "1xz9spln6s9mcwpgcv1m4jymn4gnl1bb6vh90bphqcn0vvlk8jsq")))) + "0cj07b7km5mla63qhbkxg1mnqq6vh79lsyyfpnbm29gw68w2bwy4")))) (build-system r-build-system) (propagated-inputs (list r-ade4 r-segmented)) @@ -17499,13 +17548,13 @@ datum transformations.") (define-public r-spdep (package (name "r-spdep") - (version "1.2-3") + (version "1.2-4") (source (origin (method url-fetch) (uri (cran-uri "spdep" version)) (sha256 (base32 - "0qd7qjblx49gp07pcf4qb2f93ab3p126pa77g6mq4z3jaa510hak")) + "0xx6k3rsvsz1hwj0ny8aqfi9ca54x38f8pz8sfya5cggaspxbx59")) (snippet '(for-each delete-file '("inst/doc/CO69.html" "inst/doc/CO69.R" @@ -17541,14 +17590,14 @@ spanning tree.") (define-public r-adegenet (package (name "r-adegenet") - (version "2.1.5") + (version "2.1.6") (source (origin (method url-fetch) (uri (cran-uri "adegenet" version)) (sha256 (base32 - "1wjp31634n6z6wglf4z3ydrhhn5jmpwwckmp3n2b0v5f3p2fivp4")))) + "0sx25p7bgz0h9mc3jsdnnjhvmb7sy8nb3r0z923vhk336d4xw8vq")))) (build-system r-build-system) (propagated-inputs (list r-ade4 @@ -17678,13 +17727,13 @@ either PDF/EPS files.") (define-public r-polspline (package (name "r-polspline") - (version "1.1.19") + (version "1.1.20") (source (origin (method url-fetch) (uri (cran-uri "polspline" version)) (sha256 - (base32 "0rhzf735hmbqfn2xbgcln4sqx7m9far72g5gq9mghgkw016kqglm")))) + (base32 "1dd1jwiaglkkhajzvqfkd1x5r3wzjlk5ww0yxzmns0s1kr74i4k9")))) (build-system r-build-system) (native-inputs (list gfortran)) (home-page "https://cran.r-project.org/web/packages/polspline/") @@ -17698,13 +17747,13 @@ lspec, polyclass, and polymars.") (define-public r-rms (package (name "r-rms") - (version "6.2-0") + (version "6.3-0") (source (origin (method url-fetch) (uri (cran-uri "rms" version)) (sha256 - (base32 "1di4xvsx0rwkr77nfqiysbg4qf699199xqil70i39d4zwfzqrm8h")))) + (base32 "1yfk800q4mgmrjkh0hqjkiv907sr1bi1jaigrj8l6pmg1mkynhbc")))) (build-system r-build-system) (propagated-inputs (list r-cluster @@ -17944,13 +17993,13 @@ SELECT or UPDATE queries to an end-point.") (define-public r-bookdown (package (name "r-bookdown") - (version "0.25") + (version "0.26") (source (origin (method url-fetch) (uri (cran-uri "bookdown" version)) (sha256 (base32 - "0v5nlm3lbm0h5cvd9j2211yqk68rkm416aq8qp6r8klj69xm1bri")))) + "11din9h2sgzvg44627xc5is4psbq2b34km5sbiaprskjrf474866")))) (build-system r-build-system) (propagated-inputs (list r-htmltools @@ -17965,7 +18014,7 @@ SELECT or UPDATE queries to an end-point.") ;; input to knitr. #; (native-inputs - `(("r-knitr" ,r-knitr))) + (list r-knitr)) (home-page "https://github.com/rstudio/bookdown") (synopsis "Authoring books and technical documents with R markdown") (description "This package provides output formats and utilities for @@ -18020,14 +18069,14 @@ and a QP solver.") (define-public r-hierfstat (package (name "r-hierfstat") - (version "0.5-10") + (version "0.5-11") (source (origin (method url-fetch) (uri (cran-uri "hierfstat" version)) (sha256 (base32 - "1p4vlna185sa3b5xjbysiqxcj9aa5s7dmxy41hg79vlqdivf874r")))) + "0nyb5091lr8ma9vydbssyx9503601rynlrbldv98mmrmh74h6v41")))) (build-system r-build-system) (propagated-inputs (list r-ade4 r-adegenet r-gaston r-gtools)) @@ -18046,14 +18095,14 @@ variance components, using the likelihood-ratio statistics G.") (define-public r-hapassoc (package (name "r-hapassoc") - (version "1.2-8") + (version "1.2-9") (source (origin (method url-fetch) (uri (cran-uri "hapassoc" version)) (sha256 (base32 - "0qs5jl0snzfchgpp6pabncwywxcmi743g91jvjiyyzw0lw85yv4s")))) + "09ijc4sbw743z74fzklmvig11ndkycg6j86k4214wfsj1yj6j9x6")))) (build-system r-build-system) (home-page "https://stat.sfu.ca/statgen/research/hapassoc.html") (synopsis "Inference of trait associations with SNP haplotypes") @@ -18088,14 +18137,14 @@ handle missing genotypes at some SNPs.") (define-public r-r2html (package (name "r-r2html") - (version "2.3.2") + (version "2.3.3") (source (origin (method url-fetch) (uri (cran-uri "R2HTML" version)) (sha256 (base32 - "00kxny7hajs9r2kw63qk7d03ggdxx2j1g8vbrmzp806y8aczvik9")))) + "12qg9rp1j26h2f48dfg5k9jds26ycacv3f3ymk686ks43hd1hzja")))) (properties `((upstream-name . "R2HTML"))) (build-system r-build-system) (home-page "https://github.com/nalimilan/R2HTML") @@ -18251,14 +18300,14 @@ interaction search in high-dimensional data.") (define-public r-extrafont (package (name "r-extrafont") - (version "0.17") + (version "0.18") (source (origin (method url-fetch) (uri (cran-uri "extrafont" version)) (sha256 (base32 - "0b9k2n9sk23bh45hjgnkxpjyvpdrz1hx7kmxvmb4nhlhm1wpsv9g")))) + "0mx810mld67vb1w3wkl4fhpjmkq32lgpq5x1c0a9rf8li5wskrj4")))) (build-system r-build-system) (propagated-inputs (list r-extrafontdb r-rttf2pt1)) @@ -19265,14 +19314,14 @@ external dependencies. This package has is implemented purely in R.") (define-public r-aplot (package (name "r-aplot") - (version "0.1.3") + (version "0.1.4") (source (origin (method url-fetch) (uri (cran-uri "aplot" version)) (sha256 (base32 - "10cqa35bh4lhpnybaalp3d69k392b25ba16dgbngqz0vikzp4czk")))) + "1b4jjj05a602dgn6yr1bsmbzlzkj6wf6af3k3w63g3mkqv0xzsfd")))) (properties `((upstream-name . "aplot"))) (build-system r-build-system) (propagated-inputs @@ -19280,8 +19329,7 @@ external dependencies. This package has is implemented purely in R.") r-ggplot2 r-ggplotify r-magrittr - r-patchwork - r-yulab-utils)) + r-patchwork)) (home-page "https://github.com/YuLab-SMU/aplot") (synopsis "Decorate a ggplot with associated information") (description @@ -19341,14 +19389,14 @@ colored by the number of neighboring points. This is useful to visualize the (define-public r-arrow (package (name "r-arrow") - (version "7.0.0") + (version "8.0.0") (source (origin (method url-fetch) (uri (cran-uri "arrow" version)) (sha256 (base32 - "1s9h2aw6iig45nz2rfk13qbp0qydx6cc4r6qs58f9cm9vgwsg76l")))) + "1b85vc5ld7nibqgsdkl5kbzc0rm5jh5lqfdrssvrrcxpd26a16kc")))) (properties `((upstream-name . "arrow"))) (build-system r-build-system) (inputs @@ -19402,14 +19450,14 @@ regular expressions from human readable expressions") (define-public r-mlapi (package (name "r-mlapi") - (version "0.1.0") + (version "0.1.1") (source (origin (method url-fetch) (uri (cran-uri "mlapi" version)) (sha256 (base32 - "023vk5bp8cjcq88sapkl87kdxr92bay1dyxl6xirnyj699pyj51k")))) + "1qyiii6x9b89i4pd4yi2zd23aabpmnpj18gqi5va0zy0l8r7kknr")))) (properties `((upstream-name . "mlapi"))) (build-system r-build-system) (propagated-inputs @@ -19488,14 +19536,14 @@ Row} (CSR) format.") (define-public r-text2vec (package (name "r-text2vec") - (version "0.6") + (version "0.6.1") (source (origin (method url-fetch) (uri (cran-uri "text2vec" version)) (sha256 (base32 - "0r75cv77x2zm1z66s95hic71dpbqmybz39n48q6mz7gfd3m7312y")))) + "0bisr31051hnshw26rp9r4bm8ksr977dl9k1d3fb1x79pq5aa2pi")))) (properties `((upstream-name . "text2vec"))) (build-system r-build-system) (propagated-inputs @@ -19524,14 +19572,14 @@ multicore machines.") (define-public r-mcmcpack (package (name "r-mcmcpack") - (version "1.6-2") + (version "1.6-3") (source (origin (method url-fetch) (uri (cran-uri "MCMCpack" version)) (sha256 (base32 - "18nyncvgb75q8flndni99ldr7ynqhillphkj7ydsmfv5w8b0zvqp")))) + "1cwdjn43b9hxpxf9mnas583myhk6r2258mh57f0zsc8bd4hbl56b")))) (properties `((upstream-name . "MCMCpack"))) (build-system r-build-system) (propagated-inputs @@ -19724,14 +19772,14 @@ the functions can also be applied to other types of categorical data.") (define-public r-pbmcapply (package (name "r-pbmcapply") - (version "1.5.0") + (version "1.5.1") (source (origin (method url-fetch) (uri (cran-uri "pbmcapply" version)) (sha256 (base32 - "0i58gcqpnbyvc448qfgm45b7rpbmrnagsvk1h1hsqchbbicfslnz")))) + "1p8jf7c4k45482w72sr0jw4jkz787krrxai3sl6jz5l4lda2iz3z")))) (build-system r-build-system) (home-page "https://github.com/kvnkuang/pbmcapply") (synopsis "Track the progress of apply procedures with a progress bar") @@ -19984,14 +20032,14 @@ been used in the call to @code{aov}.") (define-public r-dalex (package (name "r-dalex") - (version "2.4.0") + (version "2.4.1") (source (origin (method url-fetch) (uri (cran-uri "DALEX" version)) (sha256 (base32 - "1s7r7k5ihdbj69r27vbcs3ghra9s4yqw7cyh2rkm2ry901zq3114")))) + "0mcdd2bd8zlsz7x174g87dp8vy4wc06w58dyr27f6lgv9shzya8j")))) (properties `((upstream-name . "DALEX"))) (build-system r-build-system) (propagated-inputs @@ -20155,14 +20203,14 @@ the current document.") (define-public r-xgboost (package (name "r-xgboost") - (version "1.5.2.1") + (version "1.6.0.1") (source (origin (method url-fetch) (uri (cran-uri "xgboost" version)) (sha256 (base32 - "13mi3rmpxhgm4qbm4xcqml9n5d1xyai2k1mi52i8x60jd5m8s319")))) + "1gafjv6vcpny03lqw8s68xszalsylniavaqwsbzh46vyk4h9mscs")))) (build-system r-build-system) (propagated-inputs (list r-data-table r-jsonlite r-matrix)) @@ -20368,14 +20416,14 @@ computed using the L1 (Manhattan, taxicab) metric.") (define-public r-leiden (package (name "r-leiden") - (version "0.3.9") + (version "0.4.2") (source (origin (method url-fetch) (uri (cran-uri "leiden" version)) (sha256 (base32 - "03gaxpcab3a1av5lk8r5ll1s858gvyx5ndknci1sia96w1v44xc1")))) + "1gg24afwbz818041bhmswmdqgxv35zp5h1i1102p58aaiis8dkna")))) (properties `((upstream-name . "leiden"))) (build-system r-build-system) (propagated-inputs @@ -20745,14 +20793,14 @@ in pipelines.") (define-public r-parameters (package (name "r-parameters") - (version "0.17.0") + (version "0.18.0") (source (origin (method url-fetch) (uri (cran-uri "parameters" version)) (sha256 (base32 - "0wrhs3rhr62441cghg4nsrlp6r41nf7x5nclzz71v5c0rfn8jh79")))) + "0r6bj29frhqyv75cviw0p8kns6h8z10n7g7khyk0hzq2fqjsjrwh")))) (properties `((upstream-name . "parameters"))) (build-system r-build-system) (propagated-inputs @@ -20773,13 +20821,13 @@ effect size.") (define-public r-rgdal (package (name "r-rgdal") - (version "1.5-30") + (version "1.5-32") (source (origin (method url-fetch) (uri (cran-uri "rgdal" version)) (sha256 - (base32 "1f4zshgkaifbfcgq61vqb7jw5w2cc128d98rq2465r8696q2p0s9")))) + (base32 "1vbkyhw8nd7dw1r53qisphav31x6zvpbzilvnlvbjbj9hzhs90s5")))) (properties `((upstream-name . "rgdal"))) (build-system r-build-system) (inputs @@ -20904,13 +20952,13 @@ programming problems.") (define-public r-desolve (package (name "r-desolve") - (version "1.31") + (version "1.32") (source (origin (method url-fetch) (uri (cran-uri "deSolve" version)) (sha256 - (base32 "06gsh514msqdmri78969snhgh22d2bzmnkqfgh0s74aprfd93m8r")))) + (base32 "1bfr4w760nr7mjhpmf32z39swr6isnn1665cld2d1pdgx8b0yrvl")))) (properties `((upstream-name . "deSolve"))) (build-system r-build-system) (native-inputs @@ -20980,14 +21028,14 @@ porting.") (define-public r-subplex (package (name "r-subplex") - (version "1.7") + (version "1.8") (source (origin (method url-fetch) (uri (cran-uri "subplex" version)) (sha256 (base32 - "11zqzydbj6ivgvlw1gv1r2yxra7misbc622g575p2vckhjjg9v6m")))) + "19g5bd39gmcn27xdsklkzxg99x1r5v5q8zcw1iwry31qj24ivhrv")))) (build-system r-build-system) (native-inputs (list gfortran)) @@ -21588,18 +21636,18 @@ elicitation options based on Kass and Vaidyanathan (1992) (define-public r-reldist (package (name "r-reldist") - (version "1.7-0") + (version "1.7-1") (source (origin (method url-fetch) (uri (cran-uri "reldist" version)) (sha256 (base32 - "0i04d6w3r6fzm4bykz6lnnh6dngmd61v5wlpli70r3fzdzhi7fji")))) + "17kbqqapqmckghv7jizibmicv3bzbycfr3mz4xg3yjp3c2bap4r6")))) (properties `((upstream-name . "reldist"))) (build-system r-build-system) (propagated-inputs - (list r-densestbayes r-hmisc r-mgcv)) + (list r-densestbayes r-mgcv)) (home-page "http://www.stat.ucla.edu/~handcock/RelDist") (synopsis "Relative distribution methods") (description @@ -21760,14 +21808,14 @@ data.") (define-public r-mda (package (name "r-mda") - (version "0.5-2") + (version "0.5-3") (source (origin (method url-fetch) (uri (cran-uri "mda" version)) (sha256 (base32 - "1hq0zhhz9klmp4zcr1w8hyn7s1h9kfg57d2l2mfm7psx459j0krl")))) + "0qw4scc2w7jmnxssj5w2mdxb9rrl4dscqn54gplzm1gk2yf419mx")))) (properties `((upstream-name . "mda"))) (build-system r-build-system) (propagated-inputs (list r-class)) @@ -21929,20 +21977,18 @@ and prints vectorized images.") (define-public r-randtoolbox (package (name "r-randtoolbox") - (version "1.31.1") + (version "2.0.0") (source (origin (method url-fetch) (uri (cran-uri "randtoolbox" version)) (sha256 (base32 - "1b9vjzqg014hxp1vfb62m01d7xim5vmpbyxzlbll49bqas0jx69h")))) + "005x2igljc6vm0nsmkld9aqjqz1ccwapc8z3aw5c3ivh4n2bghf9")))) (properties `((upstream-name . "randtoolbox"))) (build-system r-build-system) (propagated-inputs (list r-rngwell)) - (native-inputs - (list gfortran)) (home-page "https://cran.r-project.org/web/packages/randtoolbox/") (synopsis "Toolbox for pseudo and quasi random number generation") (description @@ -22089,14 +22135,14 @@ models.") (define-public r-gamlss (package (name "r-gamlss") - (version "5.4-1") + (version "5.4-3") (source (origin (method url-fetch) (uri (cran-uri "gamlss" version)) (sha256 (base32 - "0fp9bmgykpqd950bk58dk423iy5r1fm3dy2gw0cwwmgivpq2lx0q")))) + "0xih19zqgpjl5qv5j38ana6x29y84shn2jfl2lk4kaw3q7yx86b6")))) (properties `((upstream-name . "gamlss"))) (build-system r-build-system) (propagated-inputs @@ -22801,14 +22847,14 @@ R\" (ISBN 978-1-119-15272-9.)") (define-public r-alabama (package (name "r-alabama") - (version "2015.3-1") + (version "2022.4-1") (source (origin (method url-fetch) (uri (cran-uri "alabama" version)) (sha256 (base32 - "0mlgk929gdismikwx4k2ndqq57nnqj7mlgvd3479b214hksgq036")))) + "0v6kl6ndm8wvp9xzya3x4gj5kh03qgx13x5vyzn410wsndcjiim8")))) (properties `((upstream-name . "alabama"))) (build-system r-build-system) (propagated-inputs (list r-numderiv)) @@ -23039,18 +23085,20 @@ variable observed over time.") (define-public r-fda (package (name "r-fda") - (version "5.5.1") + (version "6.0.3") (source (origin (method url-fetch) (uri (cran-uri "fda" version)) (sha256 (base32 - "0fm2vswc8fdi2p1axby0hjwh8m6lc1zrdikrpiamilr6w9m2zanw")))) + "1lvp4i4hqz650k27sa5flbdlkalihc79xy9128hfhr16h6wi8n10")))) (properties `((upstream-name . "fda"))) (build-system r-build-system) (propagated-inputs - (list r-desolve r-fds r-matrix)) + (list r-desolve r-fds)) + (native-inputs + (list r-knitr)) (home-page "https://www.functionaldata.org") (synopsis "Functional data analysis") (description @@ -23402,14 +23450,14 @@ it may be seen by an animal with less acute vision.") (define-public r-caret (package (name "r-caret") - (version "6.0-91") + (version "6.0-92") (source (origin (method url-fetch) (uri (cran-uri "caret" version)) (sha256 (base32 - "1kbx51cf71z2x19a0jflwnhx5jd9wk9q9203kzdxlqw5izdjvmdz")))) + "048mp325ndfl83a8p4dkd1b6zh5bws4gg9kxka5ss8qsj8m4m08x")))) (build-system r-build-system) (propagated-inputs (list r-e1071 @@ -24033,14 +24081,14 @@ Francesca Mazzia (2012).") (define-public r-lim (package (name "r-lim") - (version "1.4.6") + (version "1.4.7") (source (origin (method url-fetch) (uri (cran-uri "LIM" version)) (sha256 (base32 - "03x1gnm06bw1wrzc01110bjzd2mvjdzbc2mbrazh22jrmb32w5d8")))) + "0d9bgyd0mnag8wds993dsvlbpkhyakydlzwc3nghxzv2n8504hjj")))) (properties `((upstream-name . "LIM"))) (build-system r-build-system) (propagated-inputs @@ -24080,14 +24128,14 @@ automatically show a loader when the output is (re)calculating.") (define-public r-rsvg (package (name "r-rsvg") - (version "2.2.0") + (version "2.3.1") (source (origin (method url-fetch) (uri (cran-uri "rsvg" version)) (sha256 (base32 - "05mvi1ijnxayyj1f4p8nb56pncmm7x0sbq0d87asv7c7kw765n1a")))) + "096w4d1gvfc65d4jg7ykp23k9f7cf7f8zvzfhvhd7qkfsbjpxqkj")))) (properties `((upstream-name . "rsvg"))) (build-system r-build-system) (inputs @@ -24811,13 +24859,13 @@ actuarial models such as pension mathematics.") (define-public r-matrixextra (package (name "r-matrixextra") - (version "0.1.9-1") + (version "0.1.10") (source (origin (method url-fetch) (uri (cran-uri "MatrixExtra" version)) (sha256 - (base32 "098apgqlncgxspa8mi4bx2nk5fbk3880whqiwkvydsfsqrbv1sj0")))) + (base32 "00f6sgw6p2709gs3df68yr59nvsr429pk9xql71id3kachjzh618")))) (properties `((upstream-name . "MatrixExtra"))) (build-system r-build-system) (propagated-inputs @@ -24879,14 +24927,14 @@ least squares.") (define-public r-semtools (package (name "r-semtools") - (version "0.5-5") + (version "0.5-6") (source (origin (method url-fetch) (uri (cran-uri "semTools" version)) (sha256 (base32 - "1dpsn43ifvfy5v8w2fqdy54yclmy0d3qlzix67lflr2r7isq7y6x")))) + "1wnakz76c4mgkwvx3iycmvgrzqys860jg9zpkba0ln5c08ycw8pm")))) (properties `((upstream-name . "semTools"))) (build-system r-build-system) (propagated-inputs @@ -25053,14 +25101,14 @@ importation and recoding.") (define-public r-rockchalk (package (name "r-rockchalk") - (version "1.8.151") + (version "1.8.152") (source (origin (method url-fetch) (uri (cran-uri "rockchalk" version)) (sha256 (base32 - "17mfaxn3gj0vac5wdmsjj2z2668cszbpvan7hnxp7ic9bvsm1w2y")))) + "1d15jlgcy35pvaicaddd4zrhwm5ajb9yc3jk6dyxm99gc5wcn6h3")))) (properties `((upstream-name . "rockchalk"))) (build-system r-build-system) (propagated-inputs @@ -25080,14 +25128,14 @@ fairly comprehensive overview.") (define-public r-lisreltor (package (name "r-lisreltor") - (version "0.1.4") + (version "0.1.5") (source (origin (method url-fetch) (uri (cran-uri "lisrelToR" version)) (sha256 (base32 - "0zicq0z3hhixan1p1apybnf3v5s6v6ysll4pcz8ivygwr2swv3p5")))) + "0i51v0x87277ly0kggdd594w6q4zq62b4n7xs9r25j08bzs82nfk")))) (properties `((upstream-name . "lisrelToR"))) (build-system r-build-system) (home-page "https://cran.r-project.org/package=lisrelToR") @@ -25100,18 +25148,20 @@ output in R.") (define-public r-bdgraph (package (name "r-bdgraph") - (version "2.65") + (version "2.67") (source (origin (method url-fetch) (uri (cran-uri "BDgraph" version)) (sha256 (base32 - "0rg3wi9xwsbj90gb60p3vzkfrf76hwh47nc6fwv6c21yzd3s7vm4")))) + "0s2j4462zlgyjnqvvvxg4lynhmwwnjaw1cr1chzmagfvaj94qhhz")))) (properties `((upstream-name . "BDgraph"))) (build-system r-build-system) (propagated-inputs (list r-igraph)) + (native-inputs + (list r-knitr)) (home-page "https://www.uva.nl/profile/a.mohammadi") (synopsis "Bayesian structure learning in graphical models") (description @@ -25226,14 +25276,14 @@ translated to input syntax for the R packages @code{sem} and @code{lavaan}.") (define-public r-cdm (package (name "r-cdm") - (version "7.6-11") + (version "8.1-12") (source (origin (method url-fetch) (uri (cran-uri "CDM" version)) (sha256 (base32 - "0k3arkzz7nzswjcsr7fdmpfs94ilg8l265dyn49555fw3673cgqj")))) + "1cnk19k09cj81ic43rwbvcalvczfca4ncdyy8r1gyc8fzf2glb0i")))) (properties `((upstream-name . "CDM"))) (build-system r-build-system) (propagated-inputs @@ -25257,14 +25307,14 @@ well as Ravand and Robitzsch (2015).") (define-public r-tam (package (name "r-tam") - (version "3.7-16") + (version "4.0-16") (source (origin (method url-fetch) (uri (cran-uri "TAM" version)) (sha256 (base32 - "1969xm1f7s183h0xnd4g1bxhjp80rl7kad29zwcig0fmw6bs2mpd")))) + "00ww277hsyci5rph4gb155h0y95dmjhqgn9amz6g8zbrjb2748dw")))) (properties `((upstream-name . "TAM"))) (build-system r-build-system) (propagated-inputs @@ -25314,18 +25364,20 @@ elimination, and a simulation module for various binary data matrices.") (define-public r-irtoys (package (name "r-irtoys") - (version "0.2.1") + (version "0.2.2") (source (origin (method url-fetch) (uri (cran-uri "irtoys" version)) (sha256 (base32 - "0h6iiaxikhbxhbyksbjnb09qdxinlkwr2v9yzs5wslbni14paq5q")))) + "1qshz6czykgf53mq6xiswzv5xsjwrkrinpfkf1yavql4v08hs82b")))) (properties `((upstream-name . "irtoys"))) (build-system r-build-system) (propagated-inputs (list r-ltm r-sm)) + (native-inputs + (list r-knitr)) (home-page "https://cran.r-project.org/package=irtoys") (synopsis "Collection of functions related to Item Response Theory (IRT)") (description @@ -25381,14 +25433,14 @@ interesting features. iheatmapr uses the plotly library for interactivity.") (define-public r-packrat (package (name "r-packrat") - (version "0.7.0") + (version "0.8.0") (source (origin (method url-fetch) (uri (cran-uri "packrat" version)) (sha256 (base32 - "1hnwhdgqljqs3m7c4rjlyndyc0k85jpa4rbfymxkm3zjg3yy3g78")))) + "1vs4i19x6jdwl3jnanp127k4hk80h1mj56cjn07w1gkl542vj99h")))) (properties `((upstream-name . "packrat"))) (build-system r-build-system) (home-page "https://github.com/rstudio/packrat/") @@ -26539,14 +26591,14 @@ estimation.") (define-public r-optimx (package (name "r-optimx") - (version "2021-10.12") + (version "2022-4.30") (source (origin (method url-fetch) (uri (cran-uri "optimx" version)) (sha256 (base32 - "0hvrpfya767vp3anmb8ih516v4zz1sv4h193rn93kyjydf2lqf1r")))) + "045ls1vl1392ihwln6mngz0zg2w93ym1m607vfrg8v1949x8isgb")))) (properties `((upstream-name . "optimx"))) (build-system r-build-system) (propagated-inputs (list r-numderiv)) @@ -26567,14 +26619,14 @@ here.") (define-public r-projpred (package (name "r-projpred") - (version "2.1.1") + (version "2.1.2") (source (origin (method url-fetch) (uri (cran-uri "projpred" version)) (sha256 (base32 - "170pskvcsyk22xl4q8mklx8nw29miqzb42wajcab7bki8ap1ix46")))) + "1c6gnmknd3vb0fb5h6gd372dk27nzif90b4c1snql49wacg6b2m8")))) (properties `((upstream-name . "projpred"))) (build-system r-build-system) (propagated-inputs @@ -26688,14 +26740,14 @@ inference diagnostics. (define-public r-brms (package (name "r-brms") - (version "2.16.3") + (version "2.17.0") (source (origin (method url-fetch) (uri (cran-uri "brms" version)) (sha256 (base32 - "1q93z4cf3iy4rs6pgvph6z7hc8q05iwif76hcg8p4kr6nl82nc38")))) + "0wff5rld4kgkk2nbllvm1h4c596igzgd0q7nx1cabgl11fja7r94")))) (properties `((upstream-name . "brms"))) (build-system r-build-system) (propagated-inputs @@ -26797,14 +26849,14 @@ pies on a map.") (define-public r-scrypt (package (name "r-scrypt") - (version "0.1.3") + (version "0.1.4") (source (origin (method url-fetch) (uri (cran-uri "scrypt" version)) (sha256 (base32 - "14iblgbp9v2by8fjbrpsd59iknp5babcz7j3yv1yxxzcwyb6wrrm")))) + "12q9d4m7flbvlgssvjh1ga4jswkmqjfshf6pna6qk6v087gmzdsj")))) (properties `((upstream-name . "scrypt"))) (build-system r-build-system) (propagated-inputs @@ -27280,14 +27332,14 @@ simple interface for all functions.") (define-public r-iml (package (name "r-iml") - (version "0.10.1") + (version "0.11.0") (source (origin (method url-fetch) (uri (cran-uri "iml" version)) (sha256 (base32 - "1wz6xqhvqkzj723nw7qrlwb1171wvvpxhv3pa8cq7vcbkiflq37r")))) + "1za7bjnp07i20vyb6vxz2ya5cr8g4p076w61n8m38wnz04lz5yz5")))) (properties `((upstream-name . "iml"))) (build-system r-build-system) (propagated-inputs @@ -27297,7 +27349,6 @@ simple interface for all functions.") r-future r-future-apply r-ggplot2 - r-keras r-metrics r-prediction r-r6)) @@ -27368,14 +27419,14 @@ diagonals. This package allows you to compute the tensor product of arrays.") (define-public r-spatstat-utils (package (name "r-spatstat-utils") - (version "2.3-0") + (version "2.3-1") (source (origin (method url-fetch) (uri (cran-uri "spatstat.utils" version)) (sha256 (base32 - "06nvn2ffyrskhzaavsy6lmdp0m8askkrp1fnwrhjsj01lbjnq2az")))) + "08pybliv4r3v4rcazmlfr4a07sjfhrkmksdmhhq9k185vw4474av")))) (properties `((upstream-name . "spatstat.utils"))) (build-system r-build-system) @@ -27389,14 +27440,14 @@ which may also be useful for other purposes.") (define-public r-spatstat-sparse (package (name "r-spatstat-sparse") - (version "2.1-0") + (version "2.1-1") (source (origin (method url-fetch) (uri (cran-uri "spatstat.sparse" version)) (sha256 (base32 - "148fxbxss569w73xaqpzwpz9rfjdgznh2ngf06gvm33631222680")))) + "00vkvv5pnm82gn7vqnzrrp68y46gbkhdq0hbwqx7nxjvf5lssdcs")))) (properties `((upstream-name . "spatstat.sparse"))) (build-system r-build-system) @@ -27413,14 +27464,14 @@ matrix calculations that are common in statistics, such as quadratic forms.") (define-public r-spatstat-data (package (name "r-spatstat-data") - (version "2.1-4") + (version "2.2-0") (source (origin (method url-fetch) (uri (cran-uri "spatstat.data" version)) (sha256 (base32 - "0bq9randa3lgkh2q932iss5cxazq743q6p8asiqqf0yi32b003jq")))) + "1rf36zy29h9qabpv19hx84gjdiay7i9y9777d2zn17ahyss3p56k")))) (properties `((upstream-name . "spatstat.data"))) (build-system r-build-system) (propagated-inputs @@ -27458,14 +27509,14 @@ for the geometry of linear networks.") (define-public r-spatstat-core (package (name "r-spatstat-core") - (version "2.4-2") + (version "2.4-4") (source (origin (method url-fetch) (uri (cran-uri "spatstat.core" version)) (sha256 (base32 - "0bhdxyw212yf9y9nsvbz4yy08ka3wr3hkjqpag0ys2s1p22c51b9")))) + "0fyi8y1z919nzn47kaviln7gflhcp5qdi3gfvf7nwkdix3pkk373")))) (properties `((upstream-name . "spatstat.core"))) (build-system r-build-system) (propagated-inputs @@ -28045,14 +28096,14 @@ the @code{survival} package.") (define-public r-exactranktests (package (name "r-exactranktests") - (version "0.8-34") + (version "0.8-35") (source (origin (method url-fetch) (uri (cran-uri "exactRankTests" version)) (sha256 (base32 - "1i4mwz61mjlh1ai3dww2pjkicx9ww8c4mljnr8xlawh91479lva9")))) + "1qv9i57chhz8xiv0j8r47rbigyqs72fa7ssz99inyc0s8gzskd3y")))) (properties `((upstream-name . "exactRankTests"))) (build-system r-build-system) @@ -28255,14 +28306,14 @@ model.") (define-public r-igraph (package (name "r-igraph") - (version "1.3.0") + (version "1.3.1") (source (origin (method url-fetch) (uri (cran-uri "igraph" version)) (sha256 (base32 - "09dzc8lslljvhj2q46075vxcmlgkvq2qs500zdqyy9g8scq6iqbi")))) + "0khl87ncc9hkvx4f1kyzv7w7bg9zbyd1rk20ja3azkhpqjkjnnjh")))) (build-system r-build-system) (native-inputs (list gfortran)) @@ -28713,14 +28764,14 @@ models without involving a test set.") (define-public r-tidypredict (package (name "r-tidypredict") - (version "0.4.8") + (version "0.4.9") (source (origin (method url-fetch) (uri (cran-uri "tidypredict" version)) (sha256 (base32 - "0fff349pkksss8h1k2qza78l81ha6avx63pxziv6dfa8h62qmrdy")))) + "0x0r36zvny4rqgndx7iqh39yhr53gl4d8wd8wpvdcgg35q6z02z2")))) (properties `((upstream-name . "tidypredict"))) (build-system r-build-system) (propagated-inputs @@ -28834,14 +28885,14 @@ vignettes in all common formats.") (define-public r-tidytext (package (name "r-tidytext") - (version "0.3.2") + (version "0.3.3") (source (origin (method url-fetch) (uri (cran-uri "tidytext" version)) (sha256 (base32 - "0as7lscjl6ywk85almmb4f71vxmgkfds46g52ryggkg2isksvq3g")))) + "0kljaxyhhzbcv9jkjdy0wn6gkamh25y2xfb9k11sqhz3lv72nfvm")))) (properties `((upstream-name . "tidytext"))) (build-system r-build-system) (propagated-inputs @@ -29034,14 +29085,14 @@ data structures of the tidyverse.") (define-public r-lsa (package (name "r-lsa") - (version "0.73.2") + (version "0.73.3") (source (origin (method url-fetch) (uri (cran-uri "lsa" version)) (sha256 (base32 - "1a33irqa6qvbc02z12rgbgv8kxq2gmahy7j5bg8b23lvvaxif06b")))) + "16k1g0kh3yaw7azg76aqf3hn3b6jgqg92xx0syai8l0my9ci2zzh")))) (properties `((upstream-name . "lsa"))) (build-system r-build-system) (propagated-inputs @@ -29123,14 +29174,14 @@ phylogenetic relatedness) can also be conducted.") (define-public r-altmeta (package (name "r-altmeta") - (version "3.3") + (version "4.0") (source (origin (method url-fetch) (uri (cran-uri "altmeta" version)) (sha256 (base32 - "1xq12hnzxh7kgv2i36xprg4lkvqfmxwz3sq4a1jlq2d5g3narvcm")))) + "17cyiydf4n5j64izj7jph2v43h4x9kfd5b0x6m0ik5ci2aw8xzr5")))) (properties `((upstream-name . "altmeta"))) (build-system r-build-system) (propagated-inputs @@ -29302,18 +29353,26 @@ data to rasters. It speeds up plotting of data with millions of points.") (define-public r-seuratobject (package (name "r-seuratobject") - (version "4.0.4") + (version "4.1.0") (source (origin (method url-fetch) (uri (cran-uri "SeuratObject" version)) (sha256 (base32 - "1308hjbs8br3gp9vwm65awgp6vimwgi2jyl1ryn96l84savn2ljq")))) + "018anas8a9m3kh9jn5370v64d93k64z3iic13a75hp6r7g5hd94w")))) (properties `((upstream-name . "SeuratObject"))) (build-system r-build-system) (propagated-inputs - (list r-matrix r-rcpp r-rcppeigen r-rlang)) + (list r-future + r-future-apply + r-matrix + r-progressr + r-rcpp + r-rcppeigen + r-rgeos + r-rlang + r-sp)) (home-page "https://satijalab.org/seurat") (synopsis "Data structures for single cell data") (description @@ -29327,13 +29386,13 @@ other R users.") (define-public r-seurat (package (name "r-seurat") - (version "4.1.0") + (version "4.1.1") (source (origin (method url-fetch) (uri (cran-uri "Seurat" version)) (sha256 (base32 - "0p9i3fnkqa3vranr7c7ckzp1kq42d7p0gcfi9ml4kr334yd84195")))) + "1klamxk6dj0jgpfwll5frcnj9h8lh8c5fxdn9ky7h8xk35lsj6i0")))) (properties `((upstream-name . "Seurat"))) (build-system r-build-system) (propagated-inputs @@ -29652,14 +29711,14 @@ kernel estimators.") (define-public r-lpme (package (name "r-lpme") - (version "1.1.2") + (version "1.1.3") (source (origin (method url-fetch) (uri (cran-uri "lpme" version)) (sha256 (base32 - "1b0w5ji8hjayni1sh5id193cmanf6n11p16fijkxln4sv4lks4aw")))) + "1ch11cwjci98m7952p9wdsh9fj5y1mjya6ayq0q4wmbm824qfpzb")))) (properties `((upstream-name . "lpme"))) (build-system r-build-system) (propagated-inputs @@ -29816,13 +29875,13 @@ package also supersedes the package @code{BBmisc}.") (define-public r-mlr3pipelines (package (name "r-mlr3pipelines") - (version "0.4.0") + (version "0.4.1") (source (origin (method url-fetch) (uri (cran-uri "mlr3pipelines" version)) (sha256 (base32 - "0913f67c1r9bi68gxh1prsp0vch21bl6plahnvjrlbq8rrs1sr6p")))) + "1zz55i8c08znxpcs6gp5inaw96c6la9wnsla0972ankvj1hsrcr2")))) (build-system r-build-system) (propagated-inputs (list r-backports @@ -29879,13 +29938,13 @@ performing ordinal regression.") (define-public r-paradox (package (name "r-paradox") - (version "0.8.0") + (version "0.9.0") (source (origin (method url-fetch) (uri (cran-uri "paradox" version)) (sha256 (base32 - "1jfzbpqi1rp3r8hnk37dqwggp48ha5bnilmdz7dwzfdaskssycxa")))) + "0fzq59903fklgj3kblnpzasy13a82s72c1qjsy7d1m0fyj28ahdw")))) (build-system r-build-system) (propagated-inputs (list r-backports r-checkmate r-data-table r-mlr3misc r-r6)) @@ -29937,13 +29996,13 @@ computational operations, add-on packages provide additional functionality.") (define-public r-mlr3learners (package (name "r-mlr3learners") - (version "0.5.2") + (version "0.5.3") (source (origin (method url-fetch) (uri (cran-uri "mlr3learners" version)) (sha256 (base32 - "1d9hcrnj622ynrzg0ii0fkhz2n66ip46yln21jq1pwpwkqwqzv35")))) + "088i2piv7sgxsvc7jyr6mq53vqf8yjdlrysgqphsryq6k50i00zd")))) (build-system r-build-system) (propagated-inputs (list r-checkmate @@ -29964,14 +30023,14 @@ vector machines, and gradient boosting.") (define-public r-bbotk (package (name "r-bbotk") - (version "0.5.2") + (version "0.5.3") (source (origin (method url-fetch) (uri (cran-uri "bbotk" version)) (sha256 (base32 - "0k1vlh14mfbcgdw2yfhab7shkrqm4d2h6af12mybr9gks26xmw82")))) + "13qj8qysqismv9k9rfw770r7w8jdaw82n71k7sp3wsrlhxjxw734")))) (properties `((upstream-name . "bbotk"))) (build-system r-build-system) (propagated-inputs @@ -29994,13 +30053,13 @@ annealing.") (define-public r-mlr3tuning (package (name "r-mlr3tuning") - (version "0.13.0") + (version "0.13.1") (source (origin (method url-fetch) (uri (cran-uri "mlr3tuning" version)) (sha256 (base32 - "0czlpi8bshn8cjq7pa1cyy7lpv35g4hv2nbyhc59zrcykzfv8afm")))) + "0jfslx6pwk408ydn69grrvsp22jd7gsjmwvss0a1j0zav3q1pvks")))) (build-system r-build-system) (propagated-inputs (list r-bbotk @@ -30347,14 +30406,14 @@ in output to the equivalent HTML.") (define-public r-pkgdown (package (name "r-pkgdown") - (version "2.0.2") + (version "2.0.3") (source (origin (method url-fetch) (uri (cran-uri "pkgdown" version)) (sha256 (base32 - "11grx7a2rz6b4kwspm7c8crjav677c22hysnp4bkwh5g8kr5nm2h")))) + "0wqga9bcl7wmvkwpkkmf5hx1cl7rjq5ddvqmxhl4p1dczys3adnr")))) (properties `((upstream-name . "pkgdown"))) (build-system r-build-system) (inputs (list pandoc)) @@ -30456,14 +30515,14 @@ visualized at any level of the experiment's design.") (define-public r-qdapregex (package (name "r-qdapregex") - (version "0.7.2") + (version "0.7.5") (source (origin (method url-fetch) (uri (cran-uri "qdapRegex" version)) (sha256 (base32 - "1xa8q1way3gjadrjh3mv3xr4c6b4h16nd2c6lgl969difplpfz9p")))) + "1hdilycwrvi0q6cx7k8vg87bamm2xsafjkya5x4smxysm5k1r4qb")))) (properties `((upstream-name . "qdapRegex"))) (build-system r-build-system) (propagated-inputs (list r-stringi)) @@ -30802,14 +30861,14 @@ data you need the @code{pdftools} package.") (define-public r-pdftools (package (name "r-pdftools") - (version "3.1.1") + (version "3.2.1") (source (origin (method url-fetch) (uri (cran-uri "pdftools" version)) (sha256 (base32 - "1lflqf2ypdm4w033vyjykmsy8cl34sp42fzkfgfdhvl2d0xjhl96")))) + "1b9ppdndvlf8nl0i3xy1rx4f9j0j8ic6q9n0c4zn3rv6jdy8zqfi")))) (properties `((upstream-name . "pdftools"))) (build-system r-build-system) (inputs (list zlib poppler)) @@ -31503,16 +31562,16 @@ asynchronously from formatting.") (define-public r-rmisc (package (name "r-rmisc") - (version "1.5") + (version "1.5.1") (source (origin (method url-fetch) (uri (cran-uri "Rmisc" version)) (sha256 (base32 - "1ijjhfy3v91fspid77rrkc5dkcb2lav37wc3f4k5lwrn24wzy5y8")))) + "1h6jb0xwkyhm9lwm7nj9bhrb5dhrsifvkpqkrd594j1lz74dar8x")))) (build-system r-build-system) (propagated-inputs - (list r-plyr r-rcpp r-lattice)) + (list r-plyr r-lattice)) (home-page "https://cran.r-project.org/web/packages/Rmisc/") (synopsis "Ryan Miscellaneous") (description "The Rmisc library contains functions for data analysis and @@ -31576,13 +31635,13 @@ reading and writing arbitrary protocol-buffer data in R.") (define-public r-opencpu (package (name "r-opencpu") - (version "2.2.7") + (version "2.2.8") (source (origin (method url-fetch) (uri (cran-uri "opencpu" version)) (sha256 - (base32 "06jpmk95hm39ib5c75xw0mdrdv9x9zz1qil3m8ysb6pp1xx47jz0")))) + (base32 "1h0s7fbifyf4h1296sdk3amij0m6s12wq32mbky7xg4nz8wj29ni")))) (properties `((upstream-name . "opencpu"))) (build-system r-build-system) (inputs @@ -31619,14 +31678,14 @@ Apache2.") (define-public r-exactextractr (package (name "r-exactextractr") - (version "0.8.1") + (version "0.8.2") (source (origin (method url-fetch) (uri (cran-uri "exactextractr" version)) (sha256 (base32 - "11s58vc63r9kah815a18ihb0x2nmnjnpngybw3yr2d6715sz89nc")))) + "0x4axrq9iznvajqy07gcfcrvzniz5yj6wabchgksg0fqz0xancnc")))) (properties `((upstream-name . "exactextractr"))) (build-system r-build-system) (inputs (list geos)) @@ -31645,14 +31704,14 @@ the @code{raster} package that is suitable for extracting raster values using (define-public r-stringfish (package (name "r-stringfish") - (version "0.15.5") + (version "0.15.7") (source (origin (method url-fetch) (uri (cran-uri "stringfish" version)) (sha256 (base32 - "0ac17wl0fcpmipbvhhg5nyccg055671fnlxvnjd5l3kilx313wlx")))) + "0ddpsi7z0kzqgbq9y646pk9afclq0r7ak22zsdh0i93ni0x71c9l")))) (properties `((upstream-name . "stringfish"))) (build-system r-build-system) (propagated-inputs @@ -31799,14 +31858,14 @@ Tensorflow graphs.") (define-public r-tensorflow (package (name "r-tensorflow") - (version "2.8.0") + (version "2.9.0") (source (origin (method url-fetch) (uri (cran-uri "tensorflow" version)) (sha256 (base32 - "19ayjvlxmgjais0kx6fj9an1h1i8mh4c9dhah7dj6390p53pgz93")))) + "12c6ndxx4g6fqjakpzp9pgl29ghswhqyr6q9jahpk0cawizh2znj")))) (properties `((upstream-name . "tensorflow"))) (build-system r-build-system) (inputs (list tensorflow)) @@ -31830,14 +31889,14 @@ between them.") (define-public r-keras (package (name "r-keras") - (version "2.8.0") + (version "2.9.0") (source (origin (method url-fetch) (uri (cran-uri "keras" version)) (sha256 (base32 - "10zvy4lmhb2sbn0gsm12pf95pxj9bmi8241ap1n6170xsld9phcf")))) + "06513d1fp7cxk4v03xm9lhgj6xmp9dqqvw3lnzwbzjwdkfj948yc")))) (properties `((upstream-name . "keras"))) (build-system r-build-system) (propagated-inputs @@ -32016,24 +32075,25 @@ with the dynamic plots from @code{dygraphs}.") (define-public r-rfigshare (package (name "r-rfigshare") - (version "0.3.7") + (version "0.3.8") (source (origin (method url-fetch) (uri (cran-uri "rfigshare" version)) (sha256 (base32 - "1qgzn0mpjy4czy0pnbi395fxxx84arkg8r7rk8aidmd34584gjiq")))) + "10shwl1y9220m7ld5w9fjsjzy5yg8myrz9cz97ps9z2bw7bvka5j")))) (properties `((upstream-name . "rfigshare"))) (build-system r-build-system) (propagated-inputs (list r-ggplot2 r-httpuv r-httr - r-plyr r-rjsonio r-xml r-yaml)) + (native-inputs + (list r-knitr)) (home-page "https://github.com/ropensci/rfigshare") (synopsis "R Interface to figshare") (description @@ -32523,14 +32583,14 @@ zoom/navigate any plot when called with any active plot.") (define-public r-zoolog (package (name "r-zoolog") - (version "0.4.1") + (version "1.0.1") (source (origin (method url-fetch) (uri (cran-uri "zoolog" version)) (sha256 (base32 - "1wxxxscw4ji4p4599vdw6vcrkqm0g75x1gh13m4758lb51wav9ks")))) + "00fi7czfwr0ll9070w3ijskd0xvilj02gy8wkgqzzrlilij8ah7p")))) (properties `((upstream-name . "zoolog"))) (build-system r-build-system) (propagated-inputs @@ -32577,14 +32637,14 @@ large datasets.") (define-public r-mlearning (package (name "r-mlearning") - (version "1.0-0") + (version "1.1.1") (source (origin (method url-fetch) (uri (cran-uri "mlearning" version)) (sha256 (base32 - "0r8xfaxw83s2r27b8x5qd0k4r5ayxpkafzn9b1a0jvsr87i6520r")))) + "1zjnh4gcw068li1bks60gazn3205xhmqz67hbkb1san33lmlxya3")))) (properties `((upstream-name . "mlearning"))) (build-system r-build-system) (propagated-inputs |