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-rw-r--r--gnu/packages/cran.scm1499
1 files changed, 1374 insertions, 125 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 872d8d6f1a..0750c7d507 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -134,14 +134,14 @@ files and provide more explicit control over line endings.")
(define-public r-cachem
(package
(name "r-cachem")
- (version "1.0.5")
+ (version "1.0.6")
(source
(origin
(method url-fetch)
(uri (cran-uri "cachem" version))
(sha256
(base32
- "1xigqfhkl4n768bjgn2bqvb9k70h1ibj4lv5vvpwsh1p6vw4mkw2"))))
+ "0r0q5w8lsxak46crnkbi739qzys90hlw7cqqqhv99xzkpkvm554s"))))
(properties `((upstream-name . "cachem")))
(build-system r-build-system)
(propagated-inputs
@@ -187,18 +187,20 @@ etc.")
(define-public r-datawizard
(package
(name "r-datawizard")
- (version "0.1.0")
+ (version "0.2.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "datawizard" version))
(sha256
(base32
- "1fc27arvm6ks65kl9nrl2vnprpz7j8d0r2yassgxnnvr3p3ba043"))))
+ "1brbkjl0ds3gd0x6jl6vggzl1nfrn76z63vhj2gbl9l168iss5z3"))))
(properties `((upstream-name . "datawizard")))
(build-system r-build-system)
(propagated-inputs
`(("r-insight" ,r-insight)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://easystats.github.io/datawizard/")
(synopsis "Easy data wrangling")
(description
@@ -229,6 +231,26 @@ wrangling backend for the packages in the @code{easystats} ecosystem.")
visualization of their differences.")
(license license:gpl2+)))
+(define-public r-emdist
+ (package
+ (name "r-emdist")
+ (version "0.3-1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "emdist" version))
+ (sha256
+ (base32
+ "1z14pb9z9nkd0f2c8pln4hzkfqa9dk9n3vg8czc8jiv0ndnqi7rq"))))
+ (properties `((upstream-name . "emdist")))
+ (build-system r-build-system)
+ (home-page "http://www.rforge.net/emd")
+ (synopsis "Earth mover's distance")
+ (description
+ "This package provides tools to calculate the Earth Mover's
+Distance (EMD).")
+ (license license:expat)))
+
(define-public r-googledrive
(package
(name "r-googledrive")
@@ -638,13 +660,13 @@ variables.")
(define-public r-ggpmisc
(package
(name "r-ggpmisc")
- (version "0.4.2")
+ (version "0.4.2-1")
(source (origin
(method url-fetch)
(uri (cran-uri "ggpmisc" version))
(sha256
(base32
- "0ma0xcwjgj0sp9483s2y62ylv992dqjxqfgb3zl8f1pksypqdbac"))))
+ "1jkxcmpxq3b5ng276adph25s5w9imjxr1lqasqw50d2kcdhq58cy"))))
(build-system r-build-system)
(propagated-inputs
`(("r-dplyr" ,r-dplyr)
@@ -1195,14 +1217,14 @@ package is a port of the Python package @code{cssselect}.")
(define-public r-reprex
(package
(name "r-reprex")
- (version "2.0.0")
+ (version "2.0.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "reprex" version))
(sha256
(base32
- "1lcnxczy28n4g3rvph09va7svcznfyqa7zdggklqb924qvy7flwh"))))
+ "09k4rasp7mz6n796dsklcbc5l7prljiznrm7fra16qybr9kqcv8f"))))
(build-system r-build-system)
(propagated-inputs
`(("r-callr" ,r-callr)
@@ -1424,23 +1446,21 @@ Zucchini.")
(define-public r-httpuv
(package
(name "r-httpuv")
- (version "1.6.1")
+ (version "1.6.2")
(source (origin
(method url-fetch)
(uri (cran-uri "httpuv" version))
(sha256
(base32
- "0rxy57zl8yb5amsn3pvikha04k2vk0py4gys09lc7wr3agamswva"))
+ "1p5savhrcqlagnnh8ccnhpypbif9jhp97nq4rnhldn98gmb4a7sn"))
;; Unvendor bundled libraries. As of 1.5.4 the vendored libuv
;; only contains fixes for building on Solaris.
(patches (search-patches "r-httpuv-1.5.5-unvendor-libuv.patch"))
(modules '((guix build utils)))
+ ;; Cannot unbundle http-parser, because it contains local
+ ;; modifications.
(snippet
- `(begin
- (delete-file-recursively "src/libuv")
- ;; Cannot unbundle http-parser, because it contains local
- ;; modifications.
- #t))))
+ '(delete-file-recursively "src/libuv"))))
(build-system r-build-system)
(arguments
`(#:phases
@@ -1453,10 +1473,10 @@ Zucchini.")
;; Fix https://github.com/rstudio/httpuv/issues/282
(substitute* "src/http.cpp"
(("uv_pipe_init\\(pLoop, &pSocket->handle\\.pipe, true\\);")
- "uv_pipe_init(pLoop, &pSocket->handle.pipe, 0);"))
- #t)))))
+ "uv_pipe_init(pLoop, &pSocket->handle.pipe, 0);")))))))
(inputs
- `(("libuv" ,libuv)))
+ `(("libuv" ,libuv)
+ ("zlib" ,zlib)))
(propagated-inputs
`(("r-later" ,r-later)
("r-promises" ,r-promises)
@@ -1503,13 +1523,13 @@ in systems and applications.")
(define-public r-servr
(package
(name "r-servr")
- (version "0.22")
+ (version "0.23")
(source (origin
(method url-fetch)
(uri (cran-uri "servr" version))
(sha256
(base32
- "1vnlkbf8s55rfgz7qp2dd84pf9zw94qmdx25rl6i7jybhsxmb71h"))))
+ "1f1fgfgjgjsbn2krkbyw2qwkm0k4lq9p9jakg9zwyqlgpkdd34j4"))))
(build-system r-build-system)
(propagated-inputs
`(("r-httpuv" ,r-httpuv)
@@ -2261,14 +2281,14 @@ Bootstrap themes, which are packaged for use with Shiny applications.")
(define-public r-d3r
(package
(name "r-d3r")
- (version "0.9.1")
+ (version "1.0.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "d3r" version))
(sha256
(base32
- "0kc82vvyfxhxvqfalngn36prn3sxdiinsx04rn99ha6zdc27zp5k"))))
+ "1qijkllfaaw0lb29j8mappm8jz9kg8gkihxq5wqhb4gabsazdwva"))))
(build-system r-build-system)
(arguments
`(#:modules ((guix build utils)
@@ -2289,7 +2309,9 @@ Bootstrap themes, which are packaged for use with Shiny applications.")
(,(assoc-ref inputs "d3.v5.js")
"v5/dist/d3.min.js")
(,(assoc-ref inputs "d3.v6.js")
- "v6/dist/d3.min.js"))))
+ "v6/dist/d3.min.js")
+ (,(assoc-ref inputs "d3.v7.js")
+ "v7/dist/d3.min.js"))))
(lambda (sources targets)
(for-each (lambda (source target)
(format #t "Processing ~a --> ~a~%"
@@ -2297,8 +2319,7 @@ Bootstrap themes, which are packaged for use with Shiny applications.")
(delete-file target)
(invoke "esbuild" source "--minify"
(string-append "--outfile=" target)))
- sources targets))))
- #t)))))
+ sources targets)))))))))
(propagated-inputs
`(("r-dplyr" ,r-dplyr)
("r-htmltools" ,r-htmltools)
@@ -2333,7 +2354,14 @@ Bootstrap themes, which are packaged for use with Shiny applications.")
(uri "https://d3js.org/d3.v6.js")
(sha256
(base32
- "1x6432ca7p1pfxhz3airzw943fincn9izzxkclc1wmphcvv2n2p9"))))))
+ "1x6432ca7p1pfxhz3airzw943fincn9izzxkclc1wmphcvv2n2p9"))))
+ ("d3.v7.js"
+ ,(origin
+ (method url-fetch)
+ (uri "https://d3js.org/d3.v7.js")
+ (sha256
+ (base32
+ "0sd6vavxs8mx5xyb8xahlqghdiczqd284a7d5wravhqnrj0bw097"))))))
(home-page "https://github.com/timelyportfolio/d3r")
(synopsis "d3.js utilities for R")
(description
@@ -4029,14 +4057,14 @@ matrices, a special case of sparse matrices.")
(define-public r-bbmle
(package
(name "r-bbmle")
- (version "1.0.23.1")
+ (version "1.0.24")
(source
(origin
(method url-fetch)
(uri (cran-uri "bbmle" version))
(sha256
(base32
- "0p3l9shbr2846qmw8n0fyzf4j7gmi08aypl82jml3dwh26q1whk0"))))
+ "1bck8rmink4wsk8pcbnj4d60svxymp29pxbzwj8p9gzsg42c1v81"))))
(build-system r-build-system)
(propagated-inputs
`(("r-bdsmatrix" ,r-bdsmatrix)
@@ -4045,6 +4073,8 @@ matrices, a special case of sparse matrices.")
("r-matrix" ,r-matrix)
("r-mvtnorm" ,r-mvtnorm)
("r-numderiv" ,r-numderiv)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://cran.r-project.org/web/packages/bbmle")
(synopsis "Tools for General Maximum Likelihood Estimation")
(description
@@ -5737,13 +5767,13 @@ iVAT).")
(define-public r-xfun
(package
(name "r-xfun")
- (version "0.24")
+ (version "0.25")
(source
(origin
(method url-fetch)
(uri (cran-uri "xfun" version))
(sha256
- (base32 "10xmw82wk40kjx22slla7959993l80s9m2rsvvvb8v9g42armqz3"))))
+ (base32 "15xy6hpz35j3mn4gvllj5m6krh5d86l4rnlxazsqjlckr237qgg6"))))
(build-system r-build-system)
;; knitr itself depends on xfun
#;
@@ -5910,14 +5940,14 @@ packages that work with genomic data.")
(define-public r-tinytex
(package
(name "r-tinytex")
- (version "0.32")
+ (version "0.33")
(source
(origin
(method url-fetch)
(uri (cran-uri "tinytex" version))
(sha256
(base32
- "17y20kb5xgmz77n4rrkqmcm0cnjwfi4mn84h6zabij76b8cjiykh"))))
+ "10lqn704dqv5k5v6y964l8c77rwy4ilrc1hcb99j4vxpx3p4nd43"))))
(build-system r-build-system)
(propagated-inputs
`(("r-xfun" ,r-xfun)))
@@ -7437,14 +7467,14 @@ exchanging spatial objects with other R packages.")
(define-public r-later
(package
(name "r-later")
- (version "1.2.0")
+ (version "1.3.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "later" version))
(sha256
(base32
- "00f4n1b2ykrs2cd61pypa4d00ydx9hqq2c1a1p8psa2yym6979bm"))))
+ "0acqg29hcm2iq1418b54np7zb5pnr3xzrwc3ijv2pz9wra10ix88"))))
(build-system r-build-system)
(propagated-inputs
`(("r-rcpp" ,r-rcpp)
@@ -7562,22 +7592,20 @@ it.")
(define-public r-rgexf
(package
(name "r-rgexf")
- (version "0.16.0")
+ (version "0.16.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "rgexf" version))
(sha256
(base32
- "1vj5ha1qx0xzflchxf25ycys6clfn9y32m1717afzkvhmkwisrra"))
+ "00c2zka1n3k7p1l0mlchr063s6x58p9r3fb64d4wgl4rvsq55q3f"))
+ ;; Delete minified JavaScript files
(snippet
- '(begin
- ;; Delete minified JavaScript files
- (for-each delete-file
- '("inst/gexf-js/js/jquery-2.0.2.min.js"
- "inst/gexf-js/js/jquery-ui-1.10.3.custom.min.js"
- "inst/gexf-js/js/jquery.mousewheel.min.js"))
- #true))))
+ '(for-each delete-file
+ '("inst/gexf-js/js/jquery-2.0.2.min.js"
+ "inst/gexf-js/js/jquery-ui-1.10.3.custom.min.js"
+ "inst/gexf-js/js/jquery.mousewheel.min.js")))))
(properties `((upstream-name . "rgexf")))
(build-system r-build-system)
(arguments
@@ -7606,8 +7634,7 @@ it.")
source target)
(invoke "esbuild" source "--minify"
(string-append "--outfile=" target)))
- sources targets))))
- #t)))))
+ sources targets)))))))))
(propagated-inputs
`(("r-igraph" ,r-igraph)
("r-servr" ,r-servr)
@@ -8419,14 +8446,14 @@ hierarchical models using Markov Chain Monte Carlo (MCMC) simulation.")
(define-public r-rbibutils
(package
(name "r-rbibutils")
- (version "2.2.2")
+ (version "2.2.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "rbibutils" version))
(sha256
(base32
- "0ks43z6vvdz0d0jv5d2qrm12yb4cwvi7p3kjk6byi4farhh368di"))))
+ "1rzc2icik26qlnrbq58c24lc9m0grl83p0hyr70whallqfipa174"))))
(properties `((upstream-name . "rbibutils")))
(build-system r-build-system)
(home-page "https://geobosh.github.io/rbibutils/")
@@ -8693,14 +8720,14 @@ other add-on packages.")
(define-public r-insight
(package
(name "r-insight")
- (version "0.14.2")
+ (version "0.14.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "insight" version))
(sha256
(base32
- "0dy7m6fb9ciyskxjirk6k4blfj9k3n4zfyx677xm3cmscp61g8gp"))))
+ "1fynidv11wmh51ybwzqj3c206slfwdz8a53qr57lcxwrg7zjn94q"))))
(build-system r-build-system)
(native-inputs
`(("r-knitr" ,r-knitr)))
@@ -8981,14 +9008,14 @@ matches version and feature constraints.")
(define-public r-argparse
(package
(name "r-argparse")
- (version "2.0.3")
+ (version "2.0.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "argparse" version))
(sha256
(base32
- "1c2r417m1dxk1jhcggv3g4zax5a59k9rqs9jcs6xy2pa2333jqfj"))))
+ "1sgrr6acvfjbhksj45v6d5m5n5pp12kypcxisgbshlr9jdkmasd7"))))
(build-system r-build-system)
(inputs `(("python" ,python)))
(propagated-inputs
@@ -10199,14 +10226,14 @@ samples is large and the number of mixture components is not too large.")
(define-public r-magick
(package
(name "r-magick")
- (version "2.7.2")
+ (version "2.7.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "magick" version))
(sha256
(base32
- "1ckp85wk9lj6jjm92ww4mg1r4h4zm2cm68y6fyb1hz4mr3nihmji"))))
+ "0h942bn7wfnzbbgq9hrs75c7igmg5r1c5sad2v0znhza4cp7p1w3"))))
(build-system r-build-system)
(inputs
`(("imagemagick" ,imagemagick)
@@ -10641,14 +10668,14 @@ Hothorn, Westfall, 2010, CRC Press).")
(define-public r-emmeans
(package
(name "r-emmeans")
- (version "1.6.2-1")
+ (version "1.6.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "emmeans" version))
(sha256
(base32
- "04971fi02x4ajkx1mijdv283wb5acic0s1s8g68vv7vk2bk09rj4"))))
+ "1mwcq3hvpx04qnn5k0bv1mikjgm9mk6m83i8hj350s1c1a0mi40n"))))
(build-system r-build-system)
(propagated-inputs
`(("r-estimability" ,r-estimability)
@@ -11193,14 +11220,14 @@ user credentials.")
(define-public r-gert
(package
(name "r-gert")
- (version "1.3.1")
+ (version "1.3.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "gert" version))
(sha256
(base32
- "0ydakqhwi406pn255zgrzw31x01djrrjdaknh0d2ibw136lmw5hj"))))
+ "0pqrv58hqbf6cifwi9zxgnkql6a2j9i8wknnd5ng8z3d94zs12bz"))))
(properties `((upstream-name . "gert")))
(build-system r-build-system)
(inputs
@@ -11684,6 +11711,40 @@ using @dfn{penalized quasi-likelihood} (PQL) estimation (see Jaeger et
al. (2016)).")
(license license:gpl2)))
+(define-public r-cmdfun
+ (package
+ (name "r-cmdfun")
+ (version "1.0.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "cmdfun" version))
+ (sha256
+ (base32
+ "1pbcq7hi2lcmqnghmy3q2fsk0c9fy5m0637acyzmc096fxbx723j"))))
+ (properties `((upstream-name . "cmdfun")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-magrittr" ,r-magrittr)
+ ("r-purrr" ,r-purrr)
+ ("r-r-utils" ,r-r-utils)
+ ("r-rlang" ,r-rlang)
+ ("r-testthat" ,r-testthat)
+ ("r-usethis" ,r-usethis)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://snystrom.github.io/cmdfun/")
+ (synopsis "Framework for building interfaces to shell commands")
+ (description
+ "Writing interfaces to command line software is cumbersome. The cmdfun
+package provides a framework for building function calls to seamlessly
+interface with shell commands by allowing lazy evaluation of command line
+arguments. It also provides methods for handling user-specific paths to tool
+installs or secrets like API keys. Its focus is to equally serve package
+builders who wish to wrap command line software, and to help analysts stay
+inside R when they might usually leave to execute non-R software.")
+ (license license:expat)))
+
(define-public r-weights
(package
(name "r-weights")
@@ -11833,14 +11894,14 @@ Bioconductor packages.")
(define-public r-rgl
(package
(name "r-rgl")
- (version "0.107.10")
+ (version "0.107.14")
(source
(origin
(method url-fetch)
(uri (cran-uri "rgl" version))
(sha256
(base32
- "0ikqk30bpaak26f230rxi3l6fq5ym1558ngni86zs3nd42gqm3mi"))))
+ "1z5h4wbjj18prcykc96rqcn699pnqw6vybwj2mpbbbdw2lr3q8b7"))))
(build-system r-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@@ -13270,14 +13331,14 @@ preparing, executing, and processing HTTP requests.")
(define-public r-bigrquery
(package
(name "r-bigrquery")
- (version "1.3.2")
+ (version "1.4.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "bigrquery" version))
(sha256
(base32
- "16whccv7f94vf57dvbbrhdskz3nnbmpa11a14kp7aynckldlfy0v"))))
+ "02msq61l7vamzpvbhvalh3qil1aa7pr68pwpsivbb6pvz6p4zyns"))))
(build-system r-build-system)
(propagated-inputs
`(("r-assertthat" ,r-assertthat)
@@ -13288,6 +13349,7 @@ preparing, executing, and processing HTTP requests.")
("r-glue" ,r-glue)
("r-httr" ,r-httr)
("r-jsonlite" ,r-jsonlite)
+ ("r-lifecycle" ,r-lifecycle)
("r-prettyunits" ,r-prettyunits)
("r-progress" ,r-progress)
("r-rapidjsonr" ,r-rapidjsonr)
@@ -14394,14 +14456,14 @@ the local machine to, say, distributed processing on a remote compute cluster.")
(define-public r-future-apply
(package
(name "r-future-apply")
- (version "1.7.0")
+ (version "1.8.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "future.apply" version))
(sha256
(base32
- "1ns5cf80vyabvyz9qp6kpvkg4jycinn7x6v7x6692fgjapdnmyig"))))
+ "1ix61bfbk43pwnjb0wk8lkfgdsy5zi8svk74gar5nrl90b5w6nqd"))))
(properties `((upstream-name . "future.apply")))
(build-system r-build-system)
(arguments
@@ -16503,16 +16565,17 @@ SELECT or UPDATE queries to an end-point.")
(define-public r-bookdown
(package
(name "r-bookdown")
- (version "0.22")
+ (version "0.23")
(source (origin
(method url-fetch)
(uri (cran-uri "bookdown" version))
(sha256
(base32
- "0j80wm36mw3f14ncfwm6xx09wff1kswfiv8b309x9y0f9r46dr0z"))))
+ "1q0n3pjhgpsin4z7bdf0hixkfxvbbn1wc23040yl11wzc5x2f1ap"))))
(build-system r-build-system)
(propagated-inputs
`(("r-htmltools" ,r-htmltools)
+ ("r-jquerylib" ,r-jquerylib)
("r-knitr" ,r-knitr)
("r-rmarkdown" ,r-rmarkdown)
("r-tinytex" ,r-tinytex)
@@ -16979,22 +17042,42 @@ improvements over the @code{convertColor} function in the @code{grDevices}
package.")
(license license:expat)))
+(define-public r-yulab-utils
+ (package
+ (name "r-yulab-utils")
+ (version "0.0.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "yulab.utils" version))
+ (sha256
+ (base32
+ "1haq6k0r64gs76p2vvrm42m64r8s32kzyz573pw9789y32zn0s5q"))))
+ (properties `((upstream-name . "yulab.utils")))
+ (build-system r-build-system)
+ (home-page "https://cran.r-project.org/package=yulab.utils")
+ (synopsis "Supporting functions for packages maintained by YuLab-SMU")
+ (description
+ "Miscellaneous functions commonly used by YuLab-SMU, such as
+@code{install_zip_gh} to install R packages from Github ZIP files.")
+ (license license:artistic2.0)))
+
(define-public r-ggplotify
(package
(name "r-ggplotify")
- (version "0.0.8")
+ (version "0.0.9")
(source
(origin
(method url-fetch)
(uri (cran-uri "ggplotify" version))
(sha256
(base32
- "08c9vxm8pg6l5g3r7wsfgzsq00xdrc6v4xnn7pd3qcyw7cc8s969"))))
+ "1irm8pmf20bfl2djr591jfs7g8l7vw2673ri76pimz3285l74bp0"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ggplot2" ,r-ggplot2)
("r-gridgraphics" ,r-gridgraphics)
- ("r-rvcheck" ,r-rvcheck)))
+ ("r-yulab-utils" ,r-yulab-utils)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/GuangchuangYu/ggplotify")
@@ -17532,6 +17615,31 @@ matrix and displays the significance level on the plot. It also includes a
function for computing a matrix of correlation p-values.")
(license license:gpl2)))
+(define-public r-ggfun
+ (package
+ (name "r-ggfun")
+ (version "0.0.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "ggfun" version))
+ (sha256
+ (base32
+ "0bf8pl3scy5fx15h1fx0799cb9sg9spjapqif9gcz27pmmgdc0n9"))))
+ (properties `((upstream-name . "ggfun")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-ggplot2" ,r-ggplot2)
+ ("r-rlang" ,r-rlang)))
+ (native-inputs `(("r-knitr" ,r-knitr)))
+ (home-page "https://cran.r-project.org/package=ggfun")
+ (synopsis "Miscellaneous functions for ggplot2")
+ (description
+ "This package provides useful functions to edit ggplot object (e.g.,
+setting fonts for theme and layers, adding rounded rectangle as background for
+each of the legends).")
+ (license license:artistic2.0)))
+
(define-public r-gridtext
(package
(name "r-gridtext")
@@ -18490,14 +18598,14 @@ classification and regression models.")
(define-public r-dae
(package
(name "r-dae")
- (version "3.1-37")
+ (version "3.2-10")
(source
(origin
(method url-fetch)
(uri (cran-uri "dae" version))
(sha256
(base32
- "102fgbdpn7yvm1zj180cv4sr1096sz35d4gndsv7w9kriqyi1c1l"))))
+ "1z5vxxzzpqfl78c2c60109jdr003j48qjisj3mrhsxa89wdv9hs9"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ggplot2" ,r-ggplot2)
@@ -19186,14 +19294,14 @@ emphasize hidden group structures in networks or focus on specific nodes.")
(define-public r-terra
(package
(name "r-terra")
- (version "1.3-4")
+ (version "1.3-22")
(source
(origin
(method url-fetch)
(uri (cran-uri "terra" version))
(sha256
(base32
- "04fcraicr79vrvzqfxqsgzqp6awf2g5qrvpi76dcm3c04i5z3rlc"))))
+ "1z5zql68q4n81ccpl02hndhbavhhqs65bli1hjxlqdwdq192whkh"))))
(properties `((upstream-name . "terra")))
(build-system r-build-system)
(inputs
@@ -19952,14 +20060,14 @@ server-side.")
(define-public r-sysfonts
(package
(name "r-sysfonts")
- (version "0.8.4")
+ (version "0.8.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "sysfonts" version))
(sha256
(base32
- "0bq48hf2h4dkxymc36ypqvbwx5lbyj2m6fsikmgqiy4ixjpbvz8h"))))
+ "1fhf0x5sqx3mv72j9d0clkq1qzqiqxbxn1h808f7ccf0mb04v43y"))))
(properties `((upstream-name . "sysfonts")))
(build-system r-build-system)
(inputs
@@ -20000,14 +20108,14 @@ package.")
(define-public r-showtext
(package
(name "r-showtext")
- (version "0.9-3")
+ (version "0.9-4")
(source
(origin
(method url-fetch)
(uri (cran-uri "showtext" version))
(sha256
(base32
- "0ghxd5la8is2mz5w7lk507zgcpr5lz30miqyhyn9cqazlsfwp4wa"))))
+ "1gvj32wrs5q31bmg5dy6n85d0igm3jhkldhdv8kscw0pfrk89y36"))))
(properties `((upstream-name . "showtext")))
(build-system r-build-system)
(inputs
@@ -21215,13 +21323,13 @@ management} (aCRM).")
(define-public r-tree
(package
(name "r-tree")
- (version "1.0-40")
+ (version "1.0-41")
(source (origin
(method url-fetch)
(uri (cran-uri "tree" version))
(sha256
(base32
- "1rr6ws62j9h36f3nl713f8h3ndkh95mv46l055jvgmby5lw1dazz"))))
+ "13jwdxx3na16mly176n01zdkaqn4a8x9fc43rq5xx5vx31drkkr1"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/tree/")
(synopsis "Classification and regression trees")
@@ -23147,14 +23255,14 @@ Norwegian, Portuguese, Romanian, Russian, Spanish, Swedish and Turkish.")
(define-public r-quanteda
(package
(name "r-quanteda")
- (version "3.0.0")
+ (version "3.1.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "quanteda" version))
(sha256
(base32
- "0b1jfkdhpsg5jhjz4p0nf4cmi9p8w40wv3i2f17jf2x1n1y2hjj8"))))
+ "0gafbb73gcxx2gq9q7bg88alyhymkr471lp394m5ydij6mdm4hb9"))))
(properties `((upstream-name . "quanteda")))
(build-system r-build-system)
(propagated-inputs
@@ -23495,14 +23603,14 @@ and analyze Stan models.")
(define-public r-rpf
(package
(name "r-rpf")
- (version "1.0.7")
+ (version "1.0.8")
(source
(origin
(method url-fetch)
(uri (cran-uri "rpf" version))
(sha256
(base32
- "04n605h091d6nijbbhar79zj7gfkymb6pp7v1496avzajy483klw"))))
+ "039r6yz2ax7i9sv8vi98yg7llwb966ay6mrifpmp6q3xh1f634kl"))))
(properties `((upstream-name . "rpf")))
(build-system r-build-system)
(propagated-inputs
@@ -23934,14 +24042,14 @@ interesting features. iheatmapr uses the plotly library for interactivity.")
(define-public r-packrat
(package
(name "r-packrat")
- (version "0.6.0")
+ (version "0.7.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "packrat" version))
(sha256
(base32
- "01cn2vf95nc8bh0hh8imkn030yra3hx64q1fb8jwsr52p9s397fr"))))
+ "1hnwhdgqljqs3m7c4rjlyndyc0k85jpa4rbfymxkm3zjg3yy3g78"))))
(properties `((upstream-name . "packrat")))
(build-system r-build-system)
(home-page "https://github.com/rstudio/packrat/")
@@ -23955,14 +24063,14 @@ and reproducible way.")
(define-public r-rsconnect
(package
(name "r-rsconnect")
- (version "0.8.18")
+ (version "0.8.24")
(source
(origin
(method url-fetch)
(uri (cran-uri "rsconnect" version))
(sha256
(base32
- "01bj16iggj5fggfa7n312458p8xg30zx2vzfkd8jqcchnbrphfvl"))))
+ "19p4w9dmhsl1vdvwv3hfmd5qzf4296g0x878idfajvrx0wgfysyg"))))
(properties `((upstream-name . "rsconnect")))
(build-system r-build-system)
(propagated-inputs
@@ -24347,14 +24455,14 @@ climate data.")
(define-public r-rlinsolve
(package
(name "r-rlinsolve")
- (version "0.3.1")
+ (version "0.3.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "Rlinsolve" version))
(sha256
(base32
- "1x02xxbkchcwwfa2123n9yqfzinfi0zba8zxhp977czzwysy75cc"))))
+ "1xv500n1480qyakw0isanw1s5ywykhc207hqja4804s5s2m8zfjw"))))
(properties `((upstream-name . "Rlinsolve")))
(build-system r-build-system)
(propagated-inputs
@@ -25024,20 +25132,19 @@ infinite-precision rational arithmetic.")
(define-public r-rxnat
(package
(name "r-rxnat")
- (version "1.0.14")
+ (version "1.0.15")
(source
(origin
(method url-fetch)
(uri (cran-uri "Rxnat" version))
(sha256
(base32
- "00fl68pa0c2vy4xlny67pn41lzgm7b97wgg3dwm6z35izca62l11"))))
+ "0siylypjd8cgcmr2c443w8krg8sgr5gz4zapbinanp8vsfzivdv2"))))
(properties
`((upstream-name . "Rxnat")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-httr" ,r-httr)
+ `(("r-httr" ,r-httr)
("r-rcurl" ,r-rcurl)
("r-tibble" ,r-tibble)))
(native-inputs
@@ -25190,17 +25297,100 @@ packages, but other reference models can also be used. See the package
vignette for more information and examples.")
(license license:gpl3)))
+(define-public r-distributional
+ (package
+ (name "r-distributional")
+ (version "0.2.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "distributional" version))
+ (sha256
+ (base32
+ "0ps30ijlf0xwranxkq1z29d76d3zgy8drwxpnxp6ffmyma8mm3h2"))))
+ (properties
+ `((upstream-name . "distributional")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-digest" ,r-digest)
+ ("r-ellipsis" ,r-ellipsis)
+ ("r-farver" ,r-farver)
+ ("r-generics" ,r-generics)
+ ("r-ggplot2" ,r-ggplot2)
+ ("r-lifecycle" ,r-lifecycle)
+ ("r-numderiv" ,r-numderiv)
+ ("r-rlang" ,r-rlang)
+ ("r-scales" ,r-scales)
+ ("r-vctrs" ,r-vctrs)))
+ (home-page "https://pkg.mitchelloharawild.com/distributional/")
+ (synopsis "Vectorized probability distributions")
+ (description
+ "This package provides vectorized distribution objects with tools for
+manipulating, visualizing, and using probability distributions. It was
+designed to allow model prediction outputs to return distributions rather than
+their parameters, allowing users to directly interact with predictive
+distributions in a data-oriented workflow. In addition to providing generic
+replacements for p/d/q/r functions, other useful statistics can be computed
+including means, variances, intervals, and highest density regions.")
+ (license license:gpl3)))
+
+(define-public r-posterior
+ (package
+ (name "r-posterior")
+ (version "1.0.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "posterior" version))
+ (sha256
+ (base32
+ "000k2sih7r89nmw3nwndx5jljcvkyr61b96mdkqrw83rs74lnh6f"))))
+ (properties `((upstream-name . "posterior")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-abind" ,r-abind)
+ ("r-checkmate" ,r-checkmate)
+ ("r-distributional" ,r-distributional)
+ ("r-pillar" ,r-pillar)
+ ("r-rlang" ,r-rlang)
+ ("r-tensora" ,r-tensora)
+ ("r-tibble" ,r-tibble)
+ ("r-vctrs" ,r-vctrs)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://mc-stan.org/posterior/")
+ (synopsis "Tools for working with posterior distributions")
+ (description
+ "This package provides useful tools for both users and developers of
+packages for fitting Bayesian models or working with output from Bayesian
+models. The primary goals of the package are to:
+
+@enumerate
+@item Efficiently convert between many different useful formats of
+draws (samples) from posterior or prior distributions.
+
+@item Provide consistent methods for operations commonly performed on draws,
+for example, subsetting, binding, or mutating draws.
+
+@item Provide various summaries of draws in convenient formats.
+
+@item Provide lightweight implementations of state of the art posterior
+inference diagnostics.
+@end enumerate
+")
+ (license license:bsd-3)))
+
(define-public r-brms
(package
(name "r-brms")
- (version "2.15.0")
+ (version "2.16.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "brms" version))
(sha256
(base32
- "0byc3fyvf9qbvvgwf55ih5d4br1nnxlbaidq9fvr11bmv38h25y1"))))
+ "14ykj7h0pzyzsyd1c46ybapsz3aqnffjih5hm7khfa5jk05wbs7a"))))
(properties `((upstream-name . "brms")))
(build-system r-build-system)
(propagated-inputs
@@ -25218,6 +25408,7 @@ vignette for more information and examples.")
("r-mgcv" ,r-mgcv)
("r-nleqslv" ,r-nleqslv)
("r-nlme" ,r-nlme)
+ ("r-posterior" ,r-posterior)
("r-projpred" ,r-projpred)
("r-rcpp" ,r-rcpp)
("r-rstan" ,r-rstan)
@@ -25279,21 +25470,21 @@ multi-state models.")
(define-public r-scatterpie
(package
(name "r-scatterpie")
- (version "0.1.6")
+ (version "0.1.7")
(source
(origin
(method url-fetch)
(uri (cran-uri "scatterpie" version))
(sha256
(base32
- "1lilzybbxqhrjpwwf9050wf5f896pn5d93llp5da7ssrcn5bm9i8"))))
+ "1pmspv8a7k20zyd5xvmav2k9mnjrkfhdij3rr9k504zyki8hfy1z"))))
(properties `((upstream-name . "scatterpie")))
(build-system r-build-system)
(propagated-inputs
`(("r-ggforce" ,r-ggforce)
+ ("r-ggfun" ,r-ggfun)
("r-ggplot2" ,r-ggplot2)
("r-rlang" ,r-rlang)
- ("r-rvcheck" ,r-rvcheck)
("r-tidyr" ,r-tidyr)))
(native-inputs
`(("r-knitr" ,r-knitr)))
@@ -27361,24 +27552,28 @@ functions or computational engines (e.g. R, Spark, Stan, etc).")
(define-public r-infer
(package
(name "r-infer")
- (version "0.5.4")
+ (version "1.0.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "infer" version))
(sha256
(base32
- "0wvvgqjhyv7ql98cjzqad61wbmk7xrqd1ybk894jr5cmza13c8w2"))))
+ "1qbpcn7jqbvgwnpiyylj021j8m33p58a204yd1pfkpzd3x2lbsm6"))))
(properties `((upstream-name . "infer")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
+ `(("r-broom" ,r-broom)
+ ("r-dplyr" ,r-dplyr)
+ ("r-generics" ,r-generics)
("r-ggplot2" ,r-ggplot2)
("r-glue" ,r-glue)
("r-magrittr" ,r-magrittr)
+ ("r-patchwork" ,r-patchwork)
("r-purrr" ,r-purrr)
("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)))
+ ("r-tibble" ,r-tibble)
+ ("r-tidyr" ,r-tidyr)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/tidymodels/infer")
@@ -27787,13 +27982,13 @@ other R users.")
(define-public r-seurat
(package
(name "r-seurat")
- (version "4.0.3")
+ (version "4.0.4")
(source (origin
(method url-fetch)
(uri (cran-uri "Seurat" version))
(sha256
(base32
- "1jfzkqnk4r82ssyz6h51n2jybkdcjkpjdb2la6n2xqnfs2b8dnbm"))))
+ "1pa2v29mx39swblzwzqc7rpql2rizhi2nj426r1i63wyla6lcxc0"))))
(properties `((upstream-name . "Seurat")))
(build-system r-build-system)
(propagated-inputs
@@ -28183,20 +28378,20 @@ implemented as @code{R6} classes.")
(define-public r-mlr3
(package
(name "r-mlr3")
- (version "0.11.0")
+ (version "0.12.0")
(source (origin
(method url-fetch)
(uri (cran-uri "mlr3" version))
(sha256
(base32
- "0qh9vdac1als2123wf51bwa7spdqk33iydlawi5n5dpci892iahl"))))
+ "0nimwczsgrj29r9qrlz32qc3fkj02369zql7jhkrn3lk3mfy5zmz"))))
(build-system r-build-system)
(propagated-inputs
`(("r-r6" ,r-r6)
("r-backports" ,r-backports)
("r-checkmate" ,r-checkmate)
("r-data-table" ,r-data-table)
- ("r-digest" ,r-digest)
+ ("r-future" ,r-future)
("r-future-apply" ,r-future-apply)
("r-lgr" ,r-lgr)
("r-mlbench" ,r-mlbench)
@@ -28219,16 +28414,17 @@ computational operations, add-on packages provide additional functionality.")
(define-public r-mlr3learners
(package
(name "r-mlr3learners")
- (version "0.4.5")
+ (version "0.5.0")
(source (origin
(method url-fetch)
(uri (cran-uri "mlr3learners" version))
(sha256
(base32
- "02v4y32yn1m0akkqzhfg65ib21rgy9iz8db4kdcrvi949clkxnfk"))))
+ "1gkbbn5ah2iv4pv5q2jf4lrqkga744d4y9jlyhyjqf0x75y9wkg2"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
+ `(("r-checkmate" ,r-checkmate)
+ ("r-data-table" ,r-data-table)
("r-mlr3" ,r-mlr3)
("r-mlr3misc" ,r-mlr3misc)
("r-paradox" ,r-paradox)
@@ -28881,14 +29077,14 @@ and word lists.")
(define-public r-english
(package
(name "r-english")
- (version "1.2-5")
+ (version "1.2-6")
(source
(origin
(method url-fetch)
(uri (cran-uri "english" version))
(sha256
(base32
- "0d6rin40wy2y6k75x8d5qvf03rfy139f309wrl8xwbdb1h8fjkd1"))))
+ "1g3nmy5p8wj3ix1vp1qmkmy3dyqisrw0md8cjrx4klqkp0wqlms9"))))
(properties `((upstream-name . "english")))
(build-system r-build-system)
(native-inputs `(("r-knitr" ,r-knitr)))
@@ -29498,14 +29694,14 @@ variability than the Poisson, but less than the negative binomial.")
(define-public r-rjsonio
(package
(name "r-rjsonio")
- (version "1.3-1.4")
+ (version "1.3-1.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "RJSONIO" version))
(sha256
(base32
- "141ijm9570mg1180isvi0jb9vd3b08s5gb9dl1wa5v0m3s9jq52l"))))
+ "1dp9kdf0ca27br1wsq9pj7d55n601achpbzdzxhykzz531xhmjrl"))))
(properties `((upstream-name . "RJSONIO")))
(build-system r-build-system)
(home-page "https://cran.r-project.org/package=RJSONIO")
@@ -29572,14 +29768,14 @@ quantitative real-time polymerase chain reaction (qPCR).")
(define-public r-textplot
(package
(name "r-textplot")
- (version "0.1.4")
+ (version "0.2.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "textplot" version))
(sha256
(base32
- "1sgkndy2cxk8c76h8hwajn6f78w5jj2n8vsmaxh9kj931crzn8cy"))))
+ "1fhnwbcgkliq71lry21762djhlbap1qg4mgil0np46aa6619l21m"))))
(properties `((upstream-name . "textplot")))
(build-system r-build-system)
(propagated-inputs
@@ -29794,14 +29990,14 @@ time zone manipulations.")
(define-public r-vroom
(package
(name "r-vroom")
- (version "1.5.3")
+ (version "1.5.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "vroom" version))
(sha256
(base32
- "0hjb9qxv1ma7c38pihqhypc9l55ad1i1dfzxsz56jn3jsiw29ya4"))))
+ "15gbr35pmbnxjy0la2h20c0vf64q69gk7k996gn8b5wn3klxvg7n"))))
(properties `((upstream-name . "vroom")))
(build-system r-build-system)
(propagated-inputs
@@ -29912,13 +30108,13 @@ reading and writing arbitrary protocol-buffer data in R.")
(define-public r-opencpu
(package
(name "r-opencpu")
- (version "2.2.4")
+ (version "2.2.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "opencpu" version))
(sha256
- (base32 "0f0lrqfzzrbaimd39v1gzdirf0zpkc5n58z8jj5nl6jb6mppf4qk"))))
+ (base32 "1qlwx8iq30qfy2sh0v31pxg955bj4zs0r7v8yklbdwb3qw7kv30g"))))
(properties `((upstream-name . "opencpu")))
(build-system r-build-system)
(inputs
@@ -30116,26 +30312,49 @@ functions to retrieve the directory of the latest run or latest several
runs.")
(license license:asl2.0)))
+(define-public r-tfautograph
+ (package
+ (name "r-tfautograph")
+ (version "0.3.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "tfautograph" version))
+ (sha256
+ (base32
+ "1fgpvv330g61ghzhkwnzx04gd9l3d6x1vxd1xqslb05h5acagwqn"))))
+ (properties `((upstream-name . "tfautograph")))
+ (build-system r-build-system)
+ (inputs `(("tensorflow" ,tensorflow)))
+ (propagated-inputs
+ `(("r-reticulate" ,r-reticulate)))
+ (home-page "https://t-kalinowski.github.io/tfautograph/")
+ (synopsis "Autograph R for Tensorflow")
+ (description
+ "This package lets you translate R control flow expressions into
+Tensorflow graphs.")
+ (license license:gpl3)))
+
(define-public r-tensorflow
(package
(name "r-tensorflow")
- (version "2.5.0")
+ (version "2.6.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "tensorflow" version))
(sha256
(base32
- "00g9w4xmdyjl4578kmhng58k7afjkj2vwgcq2ik8rqwljkcz5pph"))))
+ "1lkzxc3b5gkcg4hwqr57cysplcba6ff44qz8lbvk19kxnrhjaf9g"))))
(properties `((upstream-name . "tensorflow")))
(build-system r-build-system)
(inputs `(("tensorflow" ,tensorflow)))
(propagated-inputs
`(("r-config" ,r-config)
- ("r-jsonlite" ,r-jsonlite)
("r-processx" ,r-processx)
("r-reticulate" ,r-reticulate)
("r-rstudioapi" ,r-rstudioapi)
+ ("r-tfautograph" ,r-tfautograph)
("r-tfruns" ,r-tfruns)
("r-yaml" ,r-yaml)))
(home-page "https://github.com/rstudio/tensorflow")
@@ -30150,18 +30369,20 @@ between them.")
(define-public r-keras
(package
(name "r-keras")
- (version "2.4.0")
+ (version "2.6.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "keras" version))
(sha256
(base32
- "00bw5f5d81md8db1k6bf2a91by4k25xvlwxiwv188y4vw3bfc7md"))))
+ "1pgdcypp9x9dw7aa5ka7qqgd24jdcp3ja94jpm7j6l6j4930k5vd"))))
(properties `((upstream-name . "keras")))
(build-system r-build-system)
(propagated-inputs
- `(("r-generics" ,r-generics)
+ `(("r-ellipsis" ,r-ellipsis)
+ ("r-generics" ,r-generics)
+ ("r-glue" ,r-glue)
("r-magrittr" ,r-magrittr)
("r-r6" ,r-r6)
("r-reticulate" ,r-reticulate)
@@ -30179,3 +30400,1031 @@ experimentation, supports both convolution based networks and recurrent
networks (as well as combinations of the two), and runs seamlessly on both CPU
and GPU devices.")
(license license:expat)))
+
+(define-public r-zzlite
+ (package
+ (name "r-zzlite")
+ (version "0.1.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "zzlite" version))
+ (sha256
+ (base32
+ "0vi1slx2s4r5zf82lazqv0c3m12xq73wlgsbz6af4y00h0bkr3ps"))))
+ (properties `((upstream-name . "zzlite")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-httr" ,r-httr)
+ ("r-jsonlite" ,r-jsonlite)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://cran.r-project.org/package=zzlite")
+ (synopsis "Wrapper for the Zamzar file conversion API")
+ (description
+ "This package provides a minor collection of HTTP wrappers for the Zamzar
+file conversion API. The wrappers makes it easy to utilize the API and thus
+convert between more than 100 different file formats (ranging from audio
+files, images, movie formats, etc., etc.) through an R session.")
+ (license license:gpl3)))
+
+(define-public r-ztree
+ (package
+ (name "r-ztree")
+ (version "1.0.6")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "zTree" version))
+ (sha256
+ (base32
+ "1mywxrx6bw7dzhrdwyxbjzc8ikgvw423zycyji0jjr69cfhpmywv"))))
+ (properties `((upstream-name . "zTree")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-plyr" ,r-plyr)))
+ (home-page "https://cran.r-project.org/package=zTree")
+ (synopsis "Functions to import data from z-Tree into R")
+ (description
+ "This package provides tools for reading @code{.xls} and @code{.sbj}
+files which are written by the proprietary program z-Tree for developing and
+carrying out economic experiments.")
+ (license license:gpl3)))
+
+(define-public r-distributionutils
+ (package
+ (name "r-distributionutils")
+ (version "0.6-0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "DistributionUtils" version))
+ (sha256
+ (base32
+ "08vq54pyqxlqsj6q6gsg5ikqa0z3x842j52ld5dxaq272p6xchvl"))))
+ (properties
+ `((upstream-name . "DistributionUtils")))
+ (build-system r-build-system)
+ (native-inputs
+ `(("gfortran" ,gfortran)))
+ (home-page "https://cran.r-project.org/package=DistributionUtils")
+ (synopsis "Distribution utilities")
+ (description
+ "This package provides utilities for dealing with distributions.
+Functionality includes sample skewness and kurtosis, log-histogram, tail
+plots, moments by integration, changing the point about which a moment is
+calculated, functions for testing distributions using inversion tests and the
+Massart inequality. Also included is an implementation of the incomplete
+Bessel K function.")
+ (license license:gpl2+)))
+
+(define-public r-ztpln
+ (package
+ (name "r-ztpln")
+ (version "0.1.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "ztpln" version))
+ (sha256
+ (base32
+ "18rbfdp22jaxg4nkqzj2393nhjdl1gzv4xhmr6aci76ymdixsfnl"))))
+ (properties `((upstream-name . "ztpln")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-distributionutils" ,r-distributionutils)
+ ("r-mixtools" ,r-mixtools)
+ ("r-rcpp" ,r-rcpp)
+ ("r-rcppeigen" ,r-rcppeigen)
+ ("r-rcppnumerical" ,r-rcppnumerical)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://github.com/mattocci27/ztpln")
+ (synopsis "Zero-truncated Poisson lognormal distribution")
+ (description
+ "This package provides functions for obtaining the density, random
+variates and maximum likelihood estimates of the Zero-truncated Poisson
+lognormal distribution and their mixture distribution.")
+ (license license:expat)))
+
+(define-public r-zscorer
+ (package
+ (name "r-zscorer")
+ (version "0.3.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "zscorer" version))
+ (sha256
+ (base32
+ "0aijhs0fyird5gq68x4dxchb02mxa7ijk10k9zjhngghxbjj7iqn"))))
+ (properties `((upstream-name . "zscorer")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-shiny" ,r-shiny)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://github.com/nutriverse/zscorer")
+ (synopsis "Child Anthropometry z-Score Calculator")
+ (description
+ "This package provides a tool for calculating z-scores and centiles for
+weight-for-age, length/height-for-age, weight-for-length/height, BMI-for-age,
+head circumference-for-age, age circumference-for-age, subscapular
+skinfold-for-age, triceps skinfold-for-age based on the WHO Child Growth
+Standards.")
+ (license license:agpl3+)))
+
+(define-public r-zra
+ (package
+ (name "r-zra")
+ (version "0.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "ZRA" version))
+ (sha256
+ (base32
+ "1sx1q5yf68hhlb5j1hicpj594rmgajqr25llg7ax416j0m2rnagi"))))
+ (properties `((upstream-name . "ZRA")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-dygraphs" ,r-dygraphs)
+ ("r-forecast" ,r-forecast)))
+ (home-page "https://cran.r-project.org/package=ZRA")
+ (synopsis "Dynamic plots for time series forecasting")
+ (description
+ "This package combines a forecast of a time series, using the function @code{forecast},
+with the dynamic plots from @code{dygraphs}.")
+ (license license:gpl2+)))
+
+(define-public r-rfigshare
+ (package
+ (name "r-rfigshare")
+ (version "0.3.7")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "rfigshare" version))
+ (sha256
+ (base32
+ "1qgzn0mpjy4czy0pnbi395fxxx84arkg8r7rk8aidmd34584gjiq"))))
+ (properties `((upstream-name . "rfigshare")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-ggplot2" ,r-ggplot2)
+ ("r-httpuv" ,r-httpuv)
+ ("r-httr" ,r-httr)
+ ("r-plyr" ,r-plyr)
+ ("r-rjsonio" ,r-rjsonio)
+ ("r-xml" ,r-xml)
+ ("r-yaml" ,r-yaml)))
+ (home-page "https://github.com/ropensci/rfigshare")
+ (synopsis "R Interface to figshare")
+ (description
+ "This package provides an interface to figshare, a scientific repository
+to archive and assign DOIs to data, software, figures, and more.")
+ (license license:cc0)))
+
+(define-public r-dismo
+ (package
+ (name "r-dismo")
+ (version "1.3-3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "dismo" version))
+ (sha256
+ (base32
+ "1jj9d78f251bxgrwbv1ycn677qnhvl40bfan12x8fhlaq4d36rgx"))))
+ (properties `((upstream-name . "dismo")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-raster" ,r-raster)
+ ("r-rcpp" ,r-rcpp)
+ ("r-sp" ,r-sp)))
+ (home-page "https://rspatial.org/raster/sdm/")
+ (synopsis "Species distribution modeling")
+ (description
+ "This package provides methods for species distribution modeling, i.e.,
+predicting the environmental similarity of any site to that of the locations
+of known occurrences of a species.")
+ (license license:gpl3+)))
+
+(define-public r-zoon
+ (package
+ (name "r-zoon")
+ (version "0.6.5")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "zoon" version))
+ (sha256
+ (base32
+ "02y29vr2yn8al69km8faiqrwjrc1r3hsvw3dg8lwjr65cxw1krip"))))
+ (properties `((upstream-name . "zoon")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-dismo" ,r-dismo)
+ ("r-plyr" ,r-plyr)
+ ("r-randomforest" ,r-randomforest)
+ ("r-raster" ,r-raster)
+ ("r-rcurl" ,r-rcurl)
+ ("r-rfigshare" ,r-rfigshare)
+ ("r-rgdal" ,r-rgdal)
+ ("r-roxygen2" ,r-roxygen2)
+ ("r-rworldmap" ,r-rworldmap)
+ ("r-sp" ,r-sp)
+ ("r-testthat" ,r-testthat)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://github.com/zoonproject/zoon")
+ (synopsis "Reproducible, accessible and shareable species distribution modelling")
+ (description
+ "This package reads user submitted modules from an online repository,
+runs full species distribution modelling workflows and returns output that is
+fully reproducible.")
+ (license license:bsd-3)))
+
+(define-public r-paws-common
+ (package
+ (name "r-paws-common")
+ (version "0.3.12")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "paws.common" version))
+ (sha256
+ (base32
+ "1khq1rv0yij4l0vi2x6hslnzpsd6m5n6nipfac7g3na9ah93h8i9"))))
+ (properties `((upstream-name . "paws.common")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-base64enc" ,r-base64enc)
+ ("r-digest" ,r-digest)
+ ("r-httr" ,r-httr)
+ ("r-jsonlite" ,r-jsonlite)
+ ("r-xml2" ,r-xml2)))
+ (home-page "https://cran.r-project.org/package=paws.common")
+ (synopsis "Paws low-level Amazon Web Services API")
+ (description
+ "This package provides functions for making low-level API requests to
+Amazon Web Services. The functions handle building, signing, and sending
+requests, and receiving responses. They are designed to help build
+higher-level interfaces to individual services, such as Simple Storage
+Service (S3).")
+ (license license:asl2.0)))
+
+(define-public r-paws-customer-engagement
+ (package
+ (name "r-paws-customer-engagement")
+ (version "0.1.12")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "paws.customer.engagement" version))
+ (sha256
+ (base32
+ "0ac6hzn4ilfjhzdmc9x80999fl18cz16mky31qd3y09m93w2xkdj"))))
+ (properties
+ `((upstream-name . "paws.customer.engagement")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-paws-common" ,r-paws-common)))
+ (home-page "https://github.com/paws-r/paws")
+ (synopsis "Amazon Web Services customer engagement services")
+ (description
+ "This package provides an interface to Amazon Web Services customer
+engagement services, including Simple Email Service, Connect contact center
+service, and more.")
+ (license license:asl2.0)))
+
+(define-public r-paws-cost-management
+ (package
+ (name "r-paws-cost-management")
+ (version "0.1.12")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "paws.cost.management" version))
+ (sha256
+ (base32
+ "0in4f8ygw5g2v6vl3lz2y0v51llglh8b1ymbd04d54xxlgn83knh"))))
+ (properties
+ `((upstream-name . "paws.cost.management")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-paws-common" ,r-paws-common)))
+ (home-page "https://github.com/paws-r/paws")
+ (synopsis "Amazon Web Services cost management services")
+ (description
+ "This package provides an interface to Amazon Web Services cost
+management services, including cost and usage reports, budgets, pricing, and
+more.")
+ (license license:asl2.0)))
+
+(define-public r-paws-application-integration
+ (package
+ (name "r-paws-application-integration")
+ (version "0.1.12")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "paws.application.integration" version))
+ (sha256
+ (base32
+ "0llyd9hc679pad1ih0rcc38q5xxpzinhwrl8cvrkgsjgbc3agq42"))))
+ (properties
+ `((upstream-name . "paws.application.integration")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-paws-common" ,r-paws-common)))
+ (home-page "https://github.com/paws-r/paws")
+ (synopsis "Amazon Web Services application integration services")
+ (description
+ "This package provides an interface to Amazon Web Services application
+integration services, including Simple Queue Service (SQS) message queue,
+Simple Notification Service (SNS) publish/subscribe messaging, and more.")
+ (license license:asl2.0)))
+
+(define-public r-paws-security-identity
+ (package
+ (name "r-paws-security-identity")
+ (version "0.1.12")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "paws.security.identity" version))
+ (sha256
+ (base32
+ "092lz2ipn5iqr593x7ra8c0bj64yf6315mdc3llgwrjyb4vfxif9"))))
+ (properties
+ `((upstream-name . "paws.security.identity")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-paws-common" ,r-paws-common)))
+ (home-page "https://github.com/paws-r/paws")
+ (synopsis "Amazon Web Services security, identity, and compliance services")
+ (description
+ "This package provides an interface to Amazon Web Services security,
+identity, and compliance services, including the Identity and Access
+Management (IAM) service for managing access to services and resources, and
+more.")
+ (license license:asl2.0)))
+
+(define-public r-paws-analytics
+ (package
+ (name "r-paws-analytics")
+ (version "0.1.12")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "paws.analytics" version))
+ (sha256
+ (base32
+ "04gnaxmj21l312xkrsd9bisi0bz9h6h5fyhwlqylcxi077z1yb2g"))))
+ (properties
+ `((upstream-name . "paws.analytics")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-paws-common" ,r-paws-common)))
+ (home-page "https://github.com/paws-r/paws")
+ (synopsis "Amazon Web Services analytics services")
+ (description
+ "This package provides an interface to Amazon Web Services analytics
+services, including Elastic MapReduce Hadoop and Spark big data service,
+Elasticsearch search engine, and more.")
+ (license license:asl2.0)))
+
+(define-public r-paws-machine-learning
+ (package
+ (name "r-paws-machine-learning")
+ (version "0.1.12")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "paws.machine.learning" version))
+ (sha256
+ (base32
+ "01w2y5952pk50xjbzby2pc51xrkrzjpfxbmii1b10cl2xgzfkxsa"))))
+ (properties
+ `((upstream-name . "paws.machine.learning")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-paws-common" ,r-paws-common)))
+ (home-page "https://github.com/paws-r/paws")
+ (synopsis "Amazon Web Services machine learning services")
+ (description
+ "This package provides an interface to Amazon Web Services machine
+learning services, including SageMaker managed machine learning service,
+natural language processing, speech recognition, translation, and more.")
+ (license license:asl2.0)))
+
+(define-public r-paws-management
+ (package
+ (name "r-paws-management")
+ (version "0.1.12")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "paws.management" version))
+ (sha256
+ (base32
+ "09k7wg0jlj40zs2yb3vldffpkdcjg7ap98n7c5lxr5plpca08swg"))))
+ (properties
+ `((upstream-name . "paws.management")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-paws-common" ,r-paws-common)))
+ (home-page "https://github.com/paws-r/paws")
+ (synopsis "Amazon Web Services management and governance services")
+ (description
+ "This package provides an interface to Amazon Web Services management and
+governance services, including CloudWatch application and infrastructure
+monitoring, Auto Scaling for automatically scaling resources, and more.")
+ (license license:asl2.0)))
+
+(define-public r-paws-networking
+ (package
+ (name "r-paws-networking")
+ (version "0.1.12")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "paws.networking" version))
+ (sha256
+ (base32
+ "02hxaa5nlj70mdggh379ij3fn09xm8h5ldzsyf45c342prpl6zwj"))))
+ (properties
+ `((upstream-name . "paws.networking")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-paws-common" ,r-paws-common)))
+ (home-page "https://github.com/paws-r/paws")
+ (synopsis "Amazon Web Services networking and content delivery services")
+ (description
+ "This package provides an interface to Amazon Web Services networking and
+content delivery services, including Route 53 Domain Name System service,
+CloudFront content delivery, load balancing, and more.")
+ (license license:asl2.0)))
+
+(define-public r-paws-database
+ (package
+ (name "r-paws-database")
+ (version "0.1.12")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "paws.database" version))
+ (sha256
+ (base32
+ "08jpwz95fw3f68j0wxh2lg57nn60khflldab0ryhkkbcw1iy0qyz"))))
+ (properties `((upstream-name . "paws.database")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-paws-common" ,r-paws-common)))
+ (home-page "https://github.com/paws-r/paws")
+ (synopsis
+ "Amazon Web Services Database Services")
+ (description
+ "This package provides an interface to Amazon Web Services database
+services, including Relational Database Service (RDS), DynamoDB NoSQL
+database, and more.")
+ (license license:asl2.0)))
+
+(define-public r-paws-storage
+ (package
+ (name "r-paws-storage")
+ (version "0.1.12")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "paws.storage" version))
+ (sha256
+ (base32
+ "06m887vpqp5d6k3zxdlga599dsv8v3rladk7xqaxqnld1f17am04"))))
+ (properties `((upstream-name . "paws.storage")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-paws-common" ,r-paws-common)))
+ (home-page "https://github.com/paws-r/paws")
+ (synopsis "Amazon Web Services storage services")
+ (description
+ "This package provides an interface to Amazon Web Services storage
+services, including Simple Storage Service (S3).")
+ (license license:asl2.0)))
+
+(define-public r-paws-compute
+ (package
+ (name "r-paws-compute")
+ (version "0.1.12")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "paws.compute" version))
+ (sha256
+ (base32
+ "1km6fng6il5fcjlrbbndahsw2dr2ql83hwac9wlpd67zm3wy9lky"))))
+ (properties `((upstream-name . "paws.compute")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-paws-common" ,r-paws-common)))
+ (home-page "https://github.com/paws-r/paws")
+ (synopsis "Amazon Web Services compute services")
+ (description
+ "This package provides an interface to Amazon Web Services compute
+services, including Elastic Compute Cloud (EC2), Lambda
+functions-as-a-service, containers, batch processing, and more.")
+ (license license:asl2.0)))
+
+(define-public r-paws
+ (package
+ (name "r-paws")
+ (version "0.1.11")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "paws" version))
+ (sha256
+ (base32
+ "1pkwjdrziyh6bhpilx29zsv2nmv60z6fqxgx2kvjqvl8z36yqfhw"))))
+ (properties `((upstream-name . "paws")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-paws-analytics" ,r-paws-analytics)
+ ("r-paws-application-integration" ,r-paws-application-integration)
+ ("r-paws-compute" ,r-paws-compute)
+ ("r-paws-cost-management" ,r-paws-cost-management)
+ ("r-paws-customer-engagement" ,r-paws-customer-engagement)
+ ("r-paws-database" ,r-paws-database)
+ ("r-paws-machine-learning" ,r-paws-machine-learning)
+ ("r-paws-management" ,r-paws-management)
+ ("r-paws-networking" ,r-paws-networking)
+ ("r-paws-security-identity" ,r-paws-security-identity)
+ ("r-paws-storage" ,r-paws-storage)))
+ (home-page "https://github.com/paws-r/paws")
+ (synopsis "Amazon Web Services software development kit")
+ (description
+ "This package provides an interface to Amazon Web Services, including
+storage, database, and compute services, such as Simple Storage Service (S3),
+DynamoDB NoSQL database, and Lambda functions-as-a-service.")
+ (license license:asl2.0)))
+
+(define-public r-zoomgroupstats
+ (package
+ (name "r-zoomgroupstats")
+ (version "0.1.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "zoomGroupStats" version))
+ (sha256
+ (base32
+ "0gndiq92cy6gi7f833hdjvqii3cn83wz5rjvygcvjl3dw4pwv966"))))
+ (properties
+ `((upstream-name . "zoomGroupStats")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-data-table" ,r-data-table)
+ ("r-dplyr" ,r-dplyr)
+ ("r-lubridate" ,r-lubridate)
+ ("r-magick" ,r-magick)
+ ("r-openxlsx" ,r-openxlsx)
+ ("r-paws" ,r-paws)
+ ("r-pbapply" ,r-pbapply)
+ ("r-stringr" ,r-stringr)
+ ("r-syuzhet" ,r-syuzhet)))
+ (native-inputs `(("r-knitr" ,r-knitr)))
+ (home-page "http://zoomgroupstats.org")
+ (synopsis "Analyze text, audio, and video from Zoom meetings")
+ (description
+ "This package provides utilities for processing and analyzing the files
+that are exported from a recorded Zoom meeting. This includes analyzing data
+captured through video cameras and microphones, the text-based chat, and
+meta-data. You can analyze aspects of the conversation among meeting
+participants and their emotional expressions throughout the meeting.")
+ (license license:expat)))
+
+(define-public r-zoom
+ (package
+ (name "r-zoom")
+ (version "2.0.4")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "zoom" version))
+ (sha256
+ (base32
+ "03f5rxfr6ncf1j6vpn7pip21q7ylj4bx0a5xphqb6x6i33lxf1g5"))))
+ (properties `((upstream-name . "zoom")))
+ (build-system r-build-system)
+ (home-page "https://github.com/cbarbu/R-package-zoom")
+ (synopsis "Spatial data visualization tool")
+ (description
+ "This package provides @code{zm}, a utility that allows you to
+zoom/navigate any plot when called with any active plot.")
+ (license license:gpl3+)))
+
+(define-public r-zoolog
+ (package
+ (name "r-zoolog")
+ (version "0.4.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "zoolog" version))
+ (sha256
+ (base32
+ "1lgdr4hbpdh1b468i3l9msbj8wcd20m323lv5an9y6dnfb9pm986"))))
+ (properties `((upstream-name . "zoolog")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-rdpack" ,r-rdpack)
+ ("r-stringi" ,r-stringi)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://josempozo.github.io/zoolog/")
+ (synopsis "Zooarchaeological analysis with log-ratios")
+ (description
+ "This package includes functions and reference data to generate and
+manipulate log-ratios (also known as @dfn{log size index} (LSI) values) from
+measurements obtained on zooarchaeological material. Log ratios are used to
+compare the relative (rather than the absolute) dimensions of animals from
+archaeological contexts. The zoolog package is also able to seamlessly
+integrate data and references with heterogeneous nomenclature, which is
+internally managed by a zoolog thesaurus.")
+ (license license:gpl3)))
+
+(define-public r-filehash
+ (package
+ (name "r-filehash")
+ (version "2.4-2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "filehash" version))
+ (sha256
+ (base32
+ "14zv7h5195dmfksgk8qvjgc2qq8253vga6267aa1bqs5bpvmdl5n"))))
+ (properties `((upstream-name . "filehash")))
+ (build-system r-build-system)
+ (home-page "http://github.com/rdpeng/filehash")
+ (synopsis "Simple key-value database")
+ (description
+ "This package implements a simple key-value style database where
+character string keys are associated with data values that are stored on the
+disk. A simple interface is provided for inserting, retrieving, and deleting
+data from the database. Utilities are provided that allow filehash databases
+to be treated much like environments and lists are already used in R. These
+utilities are provided to encourage interactive and exploratory analysis on
+large datasets.")
+ (license license:gpl2+)))
+
+(define-public r-mlearning
+ (package
+ (name "r-mlearning")
+ (version "1.0-0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "mlearning" version))
+ (sha256
+ (base32
+ "0r8xfaxw83s2r27b8x5qd0k4r5ayxpkafzn9b1a0jvsr87i6520r"))))
+ (properties `((upstream-name . "mlearning")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-class" ,r-class)
+ ("r-e1071" ,r-e1071)
+ ("r-ipred" ,r-ipred)
+ ("r-mass" ,r-mass)
+ ("r-nnet" ,r-nnet)
+ ("r-randomforest" ,r-randomforest)))
+ (home-page "http://www.sciviews.org/zooimage")
+ (synopsis "Machine learning algorithms with unified interface")
+ (description
+ "This package provides a unified interface to various machine learning
+algorithms. Confusion matrices are provided too.")
+ (license license:gpl2+)))
+
+(define-public r-zooimage
+ (package
+ (name "r-zooimage")
+ (version "5.5.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "zooimage" version))
+ (sha256
+ (base32
+ "0ck8w0zb9l1n9xvjwqshq9q9l8pigy3yslq2hnfbgcwk17kk9mp8"))))
+ (properties `((upstream-name . "zooimage")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-digest" ,r-digest)
+ ("r-dt" ,r-dt)
+ ("r-filehash" ,r-filehash)
+ ("r-jpeg" ,r-jpeg)
+ ("r-mass" ,r-mass)
+ ("r-mda" ,r-mda)
+ ("r-mlearning" ,r-mlearning)
+ ("r-png" ,r-png)
+ ("r-shiny" ,r-shiny)
+ ("r-svdialogs" ,r-svdialogs)
+ ("r-svmisc" ,r-svmisc)
+ ("r-tiff" ,r-tiff)))
+ (home-page "http://www.sciviews.org/zooimage")
+ (synopsis "Analysis of numerical plankton images")
+ (description
+ "This package provides a solution for analyzing digital images of
+plankton. In combination with ImageJ, an image analysis system, it processes
+digital images, measures individuals, trains for automatic classification of
+taxa, and finally, measures plankton samples (abundances, total and partial
+size spectra or biomasses, etc.).")
+ (license license:gpl2+)))
+
+(define-public r-zooarch
+ (package
+ (name "r-zooarch")
+ (version "1.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "zooaRch" version))
+ (sha256
+ (base32
+ "0grc378xppv0303sf4flfqz5002vq5a23nzbq4bsff41rww7dihc"))))
+ (properties `((upstream-name . "zooaRch")))
+ (build-system r-build-system)
+ (propagated-inputs `(("r-ggplot2" ,r-ggplot2)))
+ (native-inputs `(("r-knitr" ,r-knitr)))
+ (home-page
+ "https://cran.r-project.org/package=zooaRch")
+ (synopsis
+ "Analytical Tools for Zooarchaeological Data")
+ (description
+ "The analysis and inference of faunal remains recovered from
+archaeological sites concerns the field of zooarchaeology. The zooaRch
+package provides analytical tools to make inferences on zooarchaeological
+data. Functions in this package allow users to read, manipulate, visualize,
+and analyze zooarchaeological data.")
+ (license license:gpl2+)))
+
+(define-public r-zonebuilder
+ (package
+ (name "r-zonebuilder")
+ (version "0.0.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "zonebuilder" version))
+ (sha256
+ (base32
+ "0mxf3dz0d6bi5wwjilqivdxhy5ypnq5svky8zygha0clv45l4dmn"))))
+ (properties `((upstream-name . "zonebuilder")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-rcolorbrewer" ,r-rcolorbrewer)
+ ("r-sf" ,r-sf)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://github.com/zonebuilders/zonebuilder")
+ (synopsis "Create and explore geographic zoning systems")
+ (description
+ "This package provides functions, documentation and example data to help
+divide geographic space into discrete polygons (zones). The functions are
+motivated by research into the merits of different zoning systems. A flexible
+@code{ClockBoard} zoning system is provided, which breaks-up space by
+concentric rings and radial lines emanating from a central point.")
+ (license license:gpl3)))
+
+(define-public r-zonator
+ (package
+ (name "r-zonator")
+ (version "0.6.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "zonator" version))
+ (sha256
+ (base32
+ "1plxchpd4ypp36phl13pi9yvlrqi3lk83lv5rldrhdqynhcgfw2k"))))
+ (properties `((upstream-name . "zonator")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-ggplot2" ,r-ggplot2)
+ ("r-raster" ,r-raster)
+ ("r-rcolorbrewer" ,r-rcolorbrewer)
+ ("r-reshape2" ,r-reshape2)
+ ("r-rgdal" ,r-rgdal)))
+ (native-inputs `(("r-knitr" ,r-knitr)))
+ (home-page "https://cbig.github.io/zonator/")
+ (synopsis "Utilities for Zonation spatial conservation prioritization")
+ (description
+ "Create new analysis setups and deal with results of Zonation
+conservation prioritization software.")
+ (license license:bsd-2)))
+
+(define-public r-mmwrweek
+ (package
+ (name "r-mmwrweek")
+ (version "0.1.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "MMWRweek" version))
+ (sha256
+ (base32
+ "1l1ks44v52iggw9nhs56lfj6804yab5b17k8fzrc6h1kvj3vda0s"))))
+ (properties `((upstream-name . "MMWRweek")))
+ (build-system r-build-system)
+ (home-page "http://wwwn.cdc.gov/nndss/document/MMWR_Week_overview.pdf")
+ (synopsis "Convert dates to MMWR day, week, and year")
+ (description
+ "The first day of any MMWR week is Sunday. MMWR week numbering is
+sequential beginning with 1 and incrementing with each week to a maximum of 52
+or 53. MMWR week #1 of an MMWR year is the first week of the year that has at
+least four days in the calendar year. This package provides functionality to
+convert dates to MMWR day, week, and year and the reverse.")
+ (license license:gpl2+)))
+
+(define-public r-crul
+ (package
+ (name "r-crul")
+ (version "1.1.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "crul" version))
+ (sha256
+ (base32
+ "1kjsc5gkx5k5cfwlfjp2cjm9cdzq2l1m68bnrjmahw3lkz8wzdph"))))
+ (properties `((upstream-name . "crul")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-curl" ,r-curl)
+ ("r-httpcode" ,r-httpcode)
+ ("r-jsonlite" ,r-jsonlite)
+ ("r-mime" ,r-mime)
+ ("r-r6" ,r-r6)
+ ("r-urltools" ,r-urltools)))
+ (native-inputs `(("r-knitr" ,r-knitr)))
+ (home-page "https://github.com/ropensci/crul")
+ (synopsis "HTTP client")
+ (description
+ "This package provides a simple HTTP client, with tools for making HTTP
+requests, and mocking HTTP requests. The package is built on R6, and takes
+inspiration from Ruby's @code{faraday} gem.")
+ (license license:expat)))
+
+(define-public r-fauxpas
+ (package
+ (name "r-fauxpas")
+ (version "0.5.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "fauxpas" version))
+ (sha256
+ (base32
+ "129fzqb7wsskbn50s8x0marr4wm8jrns6hiycqcsk166k3dnyyy8"))))
+ (properties `((upstream-name . "fauxpas")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-httpcode" ,r-httpcode)
+ ("r-r6" ,r-r6)
+ ("r-whisker" ,r-whisker)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://docs.ropensci.org/fauxpas")
+ (synopsis "HTTP error helpers")
+ (description
+ "This package provides HTTP error helpers. Methods are included for
+general purpose HTTP error handling, as well as individual methods for every
+HTTP status code, both via status code numbers as well as their descriptive
+names. It supports the ability to adjust behavior to stop, message or
+warning. It includes the ability to use a custom whisker template to have any
+configuration of status code, short description, and verbose message.")
+ (license license:expat)))
+
+(define-public r-webmockr
+ (package
+ (name "r-webmockr")
+ (version "0.8.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "webmockr" version))
+ (sha256
+ (base32
+ "0j40srwi0yasmllb9wsww4m6zkiyzqd549cis4dxd7c7p24hak8j"))))
+ (properties `((upstream-name . "webmockr")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-base64enc" ,r-base64enc)
+ ("r-crul" ,r-crul)
+ ("r-curl" ,r-curl)
+ ("r-fauxpas" ,r-fauxpas)
+ ("r-jsonlite" ,r-jsonlite)
+ ("r-magrittr" ,r-magrittr)
+ ("r-r6" ,r-r6)
+ ("r-urltools" ,r-urltools)))
+ (home-page "https://github.com/ropensci/webmockr")
+ (synopsis "Stubbing and setting expectations on HTTP Requests")
+ (description
+ "This is a package for stubbing and setting expectations on HTTP
+requests. It includes tools for stubbing HTTP requests, including expected
+request conditions and response conditions. You can match on HTTP method,
+query parameters, request body, headers and more. It can be used for unit
+tests or outside of a testing context.")
+ (license license:expat)))
+
+(define-public r-mockery
+ (package
+ (name "r-mockery")
+ (version "0.4.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "mockery" version))
+ (sha256
+ (base32
+ "16zayzi2qdmiy513hvlci9f4p8jwry24006yfzrgmrvf6sf293lq"))))
+ (properties `((upstream-name . "mockery")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-testthat" ,r-testthat)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://github.com/jfiksel/mockery")
+ (synopsis "Mocking library for R")
+ (description
+ "The two main functionalities of this package are creating mock
+objects (functions) and selectively intercepting calls to a given function
+that originate in some other function. It can be used with any testing
+framework available for R. Mock objects can be injected with either this
+package's own @code{stub} function or a similar @code{with_mock} facility
+present in the @code{testthat} package.")
+ (license license:expat)))
+
+(define-public r-zoltr
+ (package
+ (name "r-zoltr")
+ (version "0.5.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "zoltr" version))
+ (sha256
+ (base32
+ "12zh7y3pwidclscgvd0b0iaqq9j5y8mc8xd6pz4vs0jy5qs3ahar"))))
+ (properties `((upstream-name . "zoltr")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-base64url" ,r-base64url)
+ ("r-dplyr" ,r-dplyr)
+ ("r-httr" ,r-httr)
+ ("r-jsonlite" ,r-jsonlite)
+ ("r-magrittr" ,r-magrittr)
+ ("r-mmwrweek" ,r-mmwrweek)
+ ("r-mockery" ,r-mockery)
+ ("r-readr" ,r-readr)
+ ("r-rlang" ,r-rlang)
+ ("r-webmockr" ,r-webmockr)))
+ (native-inputs `(("r-knitr" ,r-knitr)))
+ (home-page "https://github.com/reichlab/zoltr")
+ (synopsis "Interface to the Zoltar forecast repository API")
+ (description
+ "Zoltar is a website that provides a repository of model forecast results
+in a standardized format and a central location. It supports storing,
+retrieving, comparing, and analyzing time series forecasts for prediction
+challenges of interest to the modeling community. This package provides
+functions for working with the Zoltar API, including connecting and
+authenticating, getting information about projects, models, and forecasts,
+deleting and uploading forecast data, and downloading scores.")
+ (license license:gpl3)))
+
+(define-public r-zoib
+ (package
+ (name "r-zoib")
+ (version "1.5.5")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "zoib" version))
+ (sha256
+ (base32
+ "0inm7f2pc68ksqxvq12xp9jc99vj7ydylvs24ip12nksbj5k1n8f"))))
+ (properties `((upstream-name . "zoib")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-abind" ,r-abind)
+ ("r-coda" ,r-coda)
+ ("r-formula" ,r-formula)
+ ("r-rjags" ,r-rjags)))
+ (home-page "https://www.r-project.org")
+ (synopsis "Bayesian inference for beta regression")
+ (description
+ "This package lets you fit beta regression and zero-or-one inflated beta
+regression and obtain Bayesian inference of the model via the Markov Chain
+Monte Carlo approach implemented in JAGS.")
+ (license license:gpl3+)))
generated by cgit v1.2.3 (git 2.45.2) at 2024-07-03 09:25:26 +0000