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-rw-r--r--gnu/packages/cran.scm7790
1 files changed, 3423 insertions, 4367 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 5efc49f079..0c224379b1 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -146,8 +146,7 @@ files and provide more explicit control over line endings.")
(properties `((upstream-name . "cachem")))
(build-system r-build-system)
(propagated-inputs
- `(("r-fastmap" ,r-fastmap)
- ("r-rlang" ,r-rlang)))
+ (list r-fastmap r-rlang))
(home-page "https://cachem.r-lib.org/")
(synopsis "Cache R objects with automatic pruning")
(description
@@ -199,9 +198,9 @@ etc.")
(properties `((upstream-name . "datawizard")))
(build-system r-build-system)
(propagated-inputs
- `(("r-insight" ,r-insight)))
+ (list r-insight))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://easystats.github.io/datawizard/")
(synopsis "Easy data wrangling")
(description
@@ -223,8 +222,8 @@ wrangling backend for the packages in the @code{easystats} ecosystem.")
"0q6gwd9pqh41f6j5p9jl92aji4p8kx9inffpha93d7jc3ndsfq6q"))))
(properties `((upstream-name . "diffobj")))
(build-system r-build-system)
- (propagated-inputs `(("r-crayon" ,r-crayon)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (propagated-inputs (list r-crayon))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/brodieG/diffobj")
(synopsis "Diffs for R objects")
(description
@@ -266,22 +265,22 @@ Distance (EMD).")
(properties `((upstream-name . "googledrive")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cli" ,r-cli)
- ("r-gargle" ,r-gargle)
- ("r-glue" ,r-glue)
- ("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-lifecycle" ,r-lifecycle)
- ("r-magrittr" ,r-magrittr)
- ("r-pillar" ,r-pillar)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-uuid" ,r-uuid)
- ("r-vctrs" ,r-vctrs)
- ("r-withr" ,r-withr)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-cli
+ r-gargle
+ r-glue
+ r-httr
+ r-jsonlite
+ r-lifecycle
+ r-magrittr
+ r-pillar
+ r-purrr
+ r-rlang
+ r-tibble
+ r-uuid
+ r-vctrs
+ r-withr))
+ (native-inputs
+ (list r-knitr))
(home-page "https://googledrive.tidyverse.org")
(synopsis "Interface to Google Drive")
(description "This package lets you manage Google Drive files from R.")
@@ -301,9 +300,8 @@ Distance (EMD).")
(properties `((upstream-name . "ids")))
(build-system r-build-system)
(propagated-inputs
- `(("r-openssl" ,r-openssl)
- ("r-uuid" ,r-uuid)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-openssl r-uuid))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/richfitz/ids")
(synopsis "Generate random identifiers")
(description
@@ -325,20 +323,20 @@ pronounceable identifiers.")
(properties `((upstream-name . "googlesheets4")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cellranger" ,r-cellranger)
- ("r-cli" ,r-cli)
- ("r-curl" ,r-curl)
- ("r-gargle" ,r-gargle)
- ("r-glue" ,r-glue)
- ("r-googledrive" ,r-googledrive)
- ("r-httr" ,r-httr)
- ("r-ids" ,r-ids)
- ("r-magrittr" ,r-magrittr)
- ("r-purrr" ,r-purrr)
- ("r-rematch2" ,r-rematch2)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-vctrs" ,r-vctrs)))
+ (list r-cellranger
+ r-cli
+ r-curl
+ r-gargle
+ r-glue
+ r-googledrive
+ r-httr
+ r-ids
+ r-magrittr
+ r-purrr
+ r-rematch2
+ r-rlang
+ r-tibble
+ r-vctrs))
(home-page "https://github.com/tidyverse/googlesheets4")
(synopsis "Access Google Sheets using the Sheets API V4")
(description
@@ -361,13 +359,13 @@ can read and write both the metadata and the cell data in a Sheet.")
(properties `((upstream-name . "waldo")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cli" ,r-cli)
- ("r-diffobj" ,r-diffobj)
- ("r-fansi" ,r-fansi)
- ("r-glue" ,r-glue)
- ("r-rematch2" ,r-rematch2)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)))
+ (list r-cli
+ r-diffobj
+ r-fansi
+ r-glue
+ r-rematch2
+ r-rlang
+ r-tibble))
(home-page "https://github.com/r-lib/waldo")
(synopsis "Find differences between R objects")
(description
@@ -391,11 +389,7 @@ easier.")
(properties `((upstream-name . "rticles")))
(build-system r-build-system)
(propagated-inputs
- `(("r-knitr" ,r-knitr)
- ("r-rmarkdown" ,r-rmarkdown)
- ("r-tinytex" ,r-tinytex)
- ("r-xfun" ,r-xfun)
- ("r-yaml" ,r-yaml)))
+ (list r-knitr r-rmarkdown r-tinytex r-xfun r-yaml))
(home-page "https://github.com/rstudio/rticles")
(synopsis "Article formats for R Markdown")
(description
@@ -415,8 +409,7 @@ for authoring journal articles and conference submissions.")
"1n4vjkagqlm6kw2hilf4gjfcdjad0bcg652j9nl2ygbq3kdnh1vf"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-tibble" ,r-tibble)))
+ (list r-dplyr r-tibble))
(home-page "https://github.com/csgillespie/benchmarkme-data")
(synopsis "Data set for the @code{benchmarkme} package")
(description "This package contains the data set for the crowd-sourced
@@ -435,15 +428,15 @@ benchmarks from running the @code{benchmarkme} package.")
"0ymgsxzrvnpyvs0cff09d3lrkl12qyqx5bwammsc4vgl5ng9p69p"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(propagated-inputs
- `(("r-benchmarkmedata" ,r-benchmarkmedata)
- ("r-doparallel" ,r-doparallel)
- ("r-dplyr" ,r-dplyr)
- ("r-foreach" ,r-foreach)
- ("r-httr" ,r-httr)
- ("r-matrix" ,r-matrix)
- ("r-tibble" ,r-tibble)))
+ (list r-benchmarkmedata
+ r-doparallel
+ r-dplyr
+ r-foreach
+ r-httr
+ r-matrix
+ r-tibble))
(home-page "https://csgillespie.github.io/benchmarkme/")
(synopsis "Crowd-sourced system benchmarks")
(description "This package provides functionality to benchmark your CPU
@@ -505,11 +498,9 @@ degree elevation and curve fitting.")
`(("node" ,libnode)
("zlib" ,zlib)))
(propagated-inputs
- `(("r-curl" ,r-curl)
- ("r-jsonlite" ,r-jsonlite)
- ("r-rcpp" ,r-rcpp)))
+ (list r-curl r-jsonlite r-rcpp))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://jeroen.cran.dev/V8")
(synopsis "Embedded JavaScript and WebAssembly engine for R")
(description
@@ -531,7 +522,7 @@ WebAssembly engine.")
(properties `((upstream-name . "DOT")))
(build-system r-build-system)
(propagated-inputs
- `(("r-v8" ,r-v8)))
+ (list r-v8))
(home-page "http://haghish.com/dot")
(synopsis "Render and Export DOT Graphs in R")
(description
@@ -554,7 +545,7 @@ programming packages such as @code{knitr} and @code{rmarkdown}.")
"1ywa4kipwc2d7na6iiz3wzdah99h6aynnh74yxl3nzl40xxlgbgz"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/mdlincoln/clipr")
(synopsis "Read and write from the system clipboard")
(description
@@ -574,7 +565,7 @@ the system clipboards.")
"18vjywalpgzqyk66gajb8x1yp8avdaaf11ykynld9fd8cy82bgmp"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-lattice" ,r-lattice)))
+ (list r-lattice))
(home-page "http://zoo.R-Forge.R-project.org/")
(synopsis "S3 infrastructure for regular and irregular time series")
(description "This package contains an S3 class with methods for totally
@@ -595,8 +586,7 @@ series of numeric vectors/matrices and factors.")
(properties `((upstream-name . "fontawesome")))
(build-system r-build-system)
(propagated-inputs
- `(("r-htmltools" ,r-htmltools)
- ("r-rlang" ,r-rlang)))
+ (list r-htmltools r-rlang))
(home-page "https://github.com/rstudio/fontawesome")
(synopsis "Easily work with Font Awesome icons")
(description
@@ -645,7 +635,7 @@ Currently handlers are provided for CDK, MOE and BCI fingerprint data.")
(base32 "0kv46g21ndxchg3q8ynq7hjjkh6i2zlc21axn5y1jjzigrw047ii"))))
(properties `((upstream-name . "fpeek")))
(build-system r-build-system)
- (propagated-inputs `(("r-rcpp" ,r-rcpp)))
+ (propagated-inputs (list r-rcpp))
(home-page "https://github.com/davidgohel/fpeek")
(synopsis "Check text files content at a glance")
(description
@@ -668,14 +658,14 @@ in good performances with large files.")
(properties `((upstream-name . "ggalluvial")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-lazyeval" ,r-lazyeval)
- ("r-rlang" ,r-rlang)
- ("r-tidyr" ,r-tidyr)
- ("r-tidyselect" ,r-tidyselect)))
+ (list r-dplyr
+ r-ggplot2
+ r-lazyeval
+ r-rlang
+ r-tidyr
+ r-tidyselect))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "http://corybrunson.github.io/ggalluvial/")
(synopsis "Alluvial plots for ggplot2")
(description "This package provides alluvial plots for @code{ggplot2}.
@@ -698,22 +688,22 @@ variables.")
(properties `((upstream-name . "ggpp")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-glue" ,r-glue)
- ("r-gridextra" ,r-gridextra)
- ("r-lubridate" ,r-lubridate)
- ("r-magrittr" ,r-magrittr)
- ("r-mass" ,r-mass)
- ("r-polynom" ,r-polynom)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)
- ("r-stringr" ,r-stringr)
- ("r-tibble" ,r-tibble)
- ("r-xts" ,r-xts)
- ("r-zoo" ,r-zoo)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-dplyr
+ r-ggplot2
+ r-glue
+ r-gridextra
+ r-lubridate
+ r-magrittr
+ r-mass
+ r-polynom
+ r-rlang
+ r-scales
+ r-stringr
+ r-tibble
+ r-xts
+ r-zoo))
+ (native-inputs
+ (list r-knitr))
(home-page "https://docs.r4photobiology.info/ggpp/")
(synopsis "Grammar extensions to ggplot2")
(description
@@ -763,22 +753,22 @@ axis} (SMA), and @dfn{ranged major axis} (RMA).")
"01dnr2a33zmgi0gjsxlcz4hp68b18xsi8z1lkhgcla5im59qf9xi"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-generics" ,r-generics)
- ("r-ggplot2" ,r-ggplot2)
- ("r-ggpp" ,r-ggpp)
- ("r-lmodel2" ,r-lmodel2)
- ("r-lubridate" ,r-lubridate)
- ("r-mass" ,r-mass)
- ("r-plyr" ,r-plyr)
- ("r-polynom" ,r-polynom)
- ("r-quantreg" ,r-quantreg)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)
- ("r-splus2r" ,r-splus2r)
- ("r-tibble" ,r-tibble)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-dplyr
+ r-generics
+ r-ggplot2
+ r-ggpp
+ r-lmodel2
+ r-lubridate
+ r-mass
+ r-plyr
+ r-polynom
+ r-quantreg
+ r-rlang
+ r-scales
+ r-splus2r
+ r-tibble))
+ (native-inputs
+ (list r-knitr))
(home-page "https://www.r4photobiology.info/")
(synopsis "Miscellaneous Extensions to @code{ggplot2}")
(description "This package provides extensions to @code{ggplot2},
@@ -799,8 +789,7 @@ respecting the grammar of its graphics paradigm.")
(properties `((upstream-name . "gProfileR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-plyr" ,r-plyr)
- ("r-rcurl" ,r-rcurl)))
+ (list r-plyr r-rcurl))
(home-page "https://cran.r-project.org/web/packages/gProfileR/")
(synopsis "Interface to the g:Profiler toolkit")
(description
@@ -823,16 +812,16 @@ organisms via the @code{g:Profiler} toolkit.")
(properties `((upstream-name . "gprofiler2")))
(build-system r-build-system)
(propagated-inputs
- `(("r-crosstalk" ,r-crosstalk)
- ("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-jsonlite" ,r-jsonlite)
- ("r-plotly" ,r-plotly)
- ("r-rcurl" ,r-rcurl)
- ("r-tidyr" ,r-tidyr)
- ("r-viridislite" ,r-viridislite)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-crosstalk
+ r-dplyr
+ r-ggplot2
+ r-gridextra
+ r-jsonlite
+ r-plotly
+ r-rcurl
+ r-tidyr
+ r-viridislite))
+ (native-inputs (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/gprofiler2/")
(synopsis "Interface to the g:Profiler toolset")
(description
@@ -870,9 +859,8 @@ higher.")
(properties `((upstream-name . "oenb")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-xml" ,r-xml)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-dplyr r-xml))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/franzmohr/oenb")
(synopsis "Tools for the OeNB Data Web Service")
(description
@@ -893,13 +881,13 @@ higher.")
(base32 "019ps0njjc0rzrjygqiyn8b9vp0c3c0jd56h1yi19wzi49jvdcj0"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-farver" ,r-farver)
- ("r-labeling" ,r-labeling)
- ("r-lifecycle" ,r-lifecycle)
- ("r-munsell" ,r-munsell)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-r6" ,r-r6)
- ("r-viridislite" ,r-viridislite)))
+ (list r-farver
+ r-labeling
+ r-lifecycle
+ r-munsell
+ r-rcolorbrewer
+ r-r6
+ r-viridislite))
(home-page "https://github.com/hadley/scales")
(synopsis "Scale functions for visualization")
(description
@@ -920,7 +908,7 @@ legends.")
"0z7gngd6h83cpjhq1vg75wvzhdjbgjh7gj5d4zvvi9gd2lmagjcy"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-remotes" ,r-remotes)))
+ (list r-remotes))
(home-page "https://github.com/trinker/pacman")
(synopsis "Package Management Tool")
(description "This package provides tools to more conveniently perform
@@ -943,9 +931,7 @@ functions which can speed up workflow.")
"1hdh74az3vyzz6dqa311rhxdm74n46lyr03p862kn80p0kp9d7ap"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-gtable" ,r-gtable)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-scales" ,r-scales)))
+ (list r-gtable r-rcolorbrewer r-scales))
(home-page "https://cran.r-project.org/web/packages/pheatmap")
(synopsis "Pretty heatmaps")
(description
@@ -986,7 +972,7 @@ Chroma.js Color Palette Helper. See @url{https://gka.github.io/palettes}.")
"0n602jssl6rf596nwm6hbl7s9vdlqi20w8mrhxicj373mw5v22m8"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)))
+ (list r-rcpp))
(home-page "https://cran.r-project.org/web/packages/ecp/")
(synopsis "Multiple change-point analysis of multivariate data")
(description
@@ -1011,7 +997,7 @@ information.")
"0n0mm9jngklv7j9wa64jdji035z0smmnsp2dfwcz9isrxgjnc0m9"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rlang" ,r-rlang)))
+ (list r-rlang))
(home-page "https://github.com/hadley/ellipsis")
(synopsis "Tools for working with additional arguments")
(description
@@ -1056,8 +1042,7 @@ functions are simplified but can be faster or have other advantages.")
(properties `((upstream-name . "Matrix.utils")))
(build-system r-build-system)
(propagated-inputs
- `(("r-grr" ,r-grr)
- ("r-matrix" ,r-matrix)))
+ (list r-grr r-matrix))
(home-page "https://github.com/cvarrichio/Matrix.utils")
(synopsis
"Data.frame-Like Operations on Sparse and Dense Matrix Objects")
@@ -1079,13 +1064,13 @@ objects.")
"0yg07fdd1sbjfhhxn1dqgph2vzqyq7l52cdk5iq2a2zy1vh176yg"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-lattice" ,r-lattice)
- ("r-matrix" ,r-matrix)
- ("r-nnls" ,r-nnls)
- ("r-partykit" ,r-partykit)
- ("r-quadprog" ,r-quadprog)
- ("r-stabs" ,r-stabs)
- ("r-survival" ,r-survival)))
+ (list r-lattice
+ r-matrix
+ r-nnls
+ r-partykit
+ r-quadprog
+ r-stabs
+ r-survival))
(home-page "https://github.com/boost-R/mboost")
(synopsis "Model-based boosting")
(description
@@ -1109,10 +1094,9 @@ high-dimensional data.")
(properties `((upstream-name . "shadowtext")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-scales" ,r-scales)))
+ (list r-ggplot2 r-scales))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/GuangchuangYu/shadowtext/")
(synopsis "Shadow text grob and layer")
(description "This package implements @code{shadowtextGrob()} for
@@ -1158,15 +1142,15 @@ mechanism.")
(properties `((upstream-name . "ashr")))
(build-system r-build-system)
(propagated-inputs
- `(("r-etrunct" ,r-etrunct)
- ("r-invgamma" ,r-invgamma)
- ("r-matrix" ,r-matrix)
- ("r-mixsqp" ,r-mixsqp)
- ("r-rcpp" ,r-rcpp)
- ("r-squarem" ,r-squarem)
- ("r-truncnorm" ,r-truncnorm)))
+ (list r-etrunct
+ r-invgamma
+ r-matrix
+ r-mixsqp
+ r-rcpp
+ r-squarem
+ r-truncnorm))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/stephens999/ashr")
(synopsis "Methods for adaptive shrinkage, using empirical bayes")
(description "This package implements an empirical Bayes approach for
@@ -1185,7 +1169,7 @@ large-scale hypothesis testing and false discovery rate estimation.")
(base32
"07q0ik8jzk44vpwh48rr3fnpd7dzsdhjjsl4l850rffv3dyq4h6v"))))
(build-system r-build-system)
- (propagated-inputs `(("r-sys" ,r-sys)))
+ (propagated-inputs (list r-sys))
(home-page "https://github.com/jeroen/askpass")
(synopsis "Safe password entry for R")
(description
@@ -1230,14 +1214,10 @@ Analysis Approach Using R. Chapman-Hall, 2019,
"0aj6m9l1vkh32sar6fyvq4p8j4h2f2f347w1300qnzgaa5lmhfz6"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr) ; needed for vignettes
- ("gfortran" ,gfortran)))
+ (list r-knitr ; needed for vignettes
+ gfortran))
(propagated-inputs
- `(("r-cluster" ,r-cluster)
- ("r-lattice" ,r-lattice)
- ("r-mass" ,r-mass)
- ("r-mgcv" ,r-mgcv)
- ("r-permute" ,r-permute)))
+ (list r-cluster r-lattice r-mass r-mgcv r-permute))
(home-page "https://cran.r-project.org/web/packages/vegan")
(synopsis "Functions for community ecology")
(description
@@ -1260,37 +1240,37 @@ data types as well.")
"0ck6xmsw5p168jmw2fqv79fzfnw5jckfra7mfii261j6kl89bkw3"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-broom" ,r-broom)
- ("r-cli" ,r-cli)
- ("r-crayon" ,r-crayon)
- ("r-dbplyr" ,r-dbplyr)
- ("r-dplyr" ,r-dplyr)
- ("r-dtplyr" ,r-dtplyr)
- ("r-forcats" ,r-forcats)
- ("r-ggplot2" ,r-ggplot2)
- ("r-googledrive" ,r-googledrive)
- ("r-googlesheets4" ,r-googlesheets4)
- ("r-haven" ,r-haven)
- ("r-hms" ,r-hms)
- ("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-lubridate" ,r-lubridate)
- ("r-magrittr" ,r-magrittr)
- ("r-modelr" ,r-modelr)
- ("r-pillar" ,r-pillar)
- ("r-purrr" ,r-purrr)
- ("r-readr" ,r-readr)
- ("r-readxl" ,r-readxl)
- ("r-reprex" ,r-reprex)
- ("r-rlang" ,r-rlang)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-rvest" ,r-rvest)
- ("r-stringr" ,r-stringr)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)
- ("r-xml2" ,r-xml2)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-broom
+ r-cli
+ r-crayon
+ r-dbplyr
+ r-dplyr
+ r-dtplyr
+ r-forcats
+ r-ggplot2
+ r-googledrive
+ r-googlesheets4
+ r-haven
+ r-hms
+ r-httr
+ r-jsonlite
+ r-lubridate
+ r-magrittr
+ r-modelr
+ r-pillar
+ r-purrr
+ r-readr
+ r-readxl
+ r-reprex
+ r-rlang
+ r-rstudioapi
+ r-rvest
+ r-stringr
+ r-tibble
+ r-tidyr
+ r-xml2))
+ (native-inputs
+ (list r-knitr))
(home-page "https://tidyverse.tidyverse.org")
(synopsis "Install and load packages from the \"Tidyverse\"")
(description
@@ -1312,15 +1292,15 @@ single step.")
(base32 "1905vxgnj3q09l1wf6rwxpbpydznp06nbkrclnc05j2415z4gfw9"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-httr" ,r-httr)
- ("r-lifecycle" ,r-lifecycle)
- ("r-magrittr" ,r-magrittr)
- ("r-rlang" ,r-rlang)
- ("r-selectr" ,r-selectr)
- ("r-tibble" ,r-tibble)
- ("r-xml2" ,r-xml2)))
+ (list r-httr
+ r-lifecycle
+ r-magrittr
+ r-rlang
+ r-selectr
+ r-tibble
+ r-xml2))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/hadley/rvest")
(synopsis "Simple web scraping for R")
(description
@@ -1341,8 +1321,7 @@ scraping tasks, inspired by libraries like @code{BeautifulSoup}.")
(base32 "09y1n3iy297g49xlpl7xrjpwgnm57pskx5991lyfcpizbz8ax22m"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-stringr" ,r-stringr)
- ("r-r6" ,r-r6)))
+ (list r-stringr r-r6))
(home-page "https://sjp.co.nz/projects/selectr/")
(synopsis "Translate CSS selectors to XPath expressions")
(description
@@ -1366,18 +1345,18 @@ package is a port of the Python package @code{cssselect}.")
"09k4rasp7mz6n796dsklcbc5l7prljiznrm7fra16qybr9kqcv8f"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-callr" ,r-callr)
- ("r-cli" ,r-cli)
- ("r-clipr" ,r-clipr)
- ("r-fs" ,r-fs)
- ("r-glue" ,r-glue)
- ("r-knitr" ,r-knitr)
- ("r-rlang" ,r-rlang)
- ("r-rmarkdown" ,r-rmarkdown)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-withr" ,r-withr)))
+ (list r-callr
+ r-cli
+ r-clipr
+ r-fs
+ r-glue
+ r-knitr
+ r-rlang
+ r-rmarkdown
+ r-rstudioapi
+ r-withr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/tidyverse/reprex")
(synopsis "Prepare reproducible R code examples for sharing")
(description
@@ -1401,8 +1380,7 @@ such as copy/paste from an R session.")
"0ss750frzvj0bm1w7zblmcsjpszhnbffwlkaw31sm003lbx9hy58"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-gplots" ,r-gplots)
- ("r-rcpp" ,r-rcpp)))
+ (list r-gplots r-rcpp))
(home-page "https://cran.r-project.org/web/packages/ReorderCluster")
(synopsis "Reordering the dendrogram according to the class labels")
(description "This package provides tools for performing the leaf reordering
@@ -1423,8 +1401,7 @@ same time tries to group instances from the same class together.")
"02inaf3c7b0hikii7p2zwaphrq5myv4in92d9jxd1ilmhla5awnn"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-r6" ,r-r6)
- ("r-processx" ,r-processx)))
+ (list r-r6 r-processx))
(home-page "https://github.com/r-lib/callr#readme")
(synopsis "Call R from R")
(description
@@ -1444,10 +1421,7 @@ that.")
(base32
"1pacvhw5m4fsk3ysbal50fdqbvlaz8ywyqp6bn1wh42wipqbb2i8"))))
(propagated-inputs
- `(("r-nnet" ,r-nnet)
- ("r-nlme" ,r-nlme)
- ("r-mass" ,r-mass)
- ("r-rsolnp" ,r-rsolnp)))
+ (list r-nnet r-nlme r-mass r-rsolnp))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/depmixS4/")
(synopsis "Dependent Mixture Models")
@@ -1469,10 +1443,7 @@ mixture models.")
"15mambxr8c7k2ikdfsl1w3vxvm54dsnk0cl1qvks6iig7rql3d14"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-cellranger" ,r-cellranger)
- ("r-progress" ,r-progress)
- ("r-rcpp" ,r-rcpp)
- ("r-tibble" ,r-tibble)))
+ (list r-cellranger r-progress r-rcpp r-tibble))
(home-page "https://readxl.tidyverse.org")
(synopsis "Read Excel files")
(description
@@ -1495,12 +1466,12 @@ the embedded @code{RapidXML} C++ library.")
"0pni9v3nradvy8sp2m07903vc7z610xrh426lf19dxss12kgrfi8"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-formula" ,r-formula)
- ("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-partykit" ,r-partykit)
- ("r-sandwich" ,r-sandwich)
- ("r-survival" ,r-survival)))
+ (list r-formula
+ r-ggplot2
+ r-gridextra
+ r-partykit
+ r-sandwich
+ r-survival))
(home-page "https://cran.r-project.org/web/packages/model4you/")
(synopsis "Stratified and personalised models based on trees and forests")
(description
@@ -1526,14 +1497,14 @@ the personalised models.")
"1i31nff7bqibk6r4hhd4j1vzwbyaf8493v0bjaagn36njmysfnw2"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-broom" ,r-broom)
- ("r-magrittr" ,r-magrittr)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)
- ("r-tidyselect" ,r-tidyselect)
- ("r-vctrs" ,r-vctrs)))
+ (list r-broom
+ r-magrittr
+ r-purrr
+ r-rlang
+ r-tibble
+ r-tidyr
+ r-tidyselect
+ r-vctrs))
(home-page "https://github.com/tidyverse/modelr")
(synopsis "Helper functions for modelling in pipelines")
(description
@@ -1572,7 +1543,7 @@ models.")
"05dm3nl0ffsz2ziw3bz5bivyxk7r5bxs8xhky3hz660qaqzd51ki"))))
(build-system r-build-system)
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/HiddenMarkov/")
(synopsis "Hidden markov models for R")
(description "This package contains functions for the analysis of Discrete
@@ -1614,13 +1585,9 @@ Zucchini.")
(("uv_pipe_init\\(pLoop, &pSocket->handle\\.pipe, true\\);")
"uv_pipe_init(pLoop, &pSocket->handle.pipe, 0);")))))))
(inputs
- `(("libuv" ,libuv)
- ("zlib" ,zlib)))
+ (list libuv zlib))
(propagated-inputs
- `(("r-later" ,r-later)
- ("r-promises" ,r-promises)
- ("r-r6" ,r-r6)
- ("r-rcpp" ,r-rcpp)))
+ (list r-later r-promises r-r6 r-rcpp))
(home-page "https://github.com/rstudio/httpuv")
(synopsis "HTTP and WebSocket server library for R")
(description
@@ -1645,7 +1612,7 @@ particularly easy to create complete web applications using httpuv alone.")
"1lhzcpz9clwq04i5m6jzkvw9x03pwlqrixv4l9xzchjr8d84nd86"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://arxiv.org/abs/1403.2805")
(synopsis "Robust, high performance JSON parser and generator for R")
(description
@@ -1671,10 +1638,7 @@ in systems and applications.")
"11x0857m3xzdbzr4z0vx4fcdk36arfagyf2qgamvprich0qisknr"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-httpuv" ,r-httpuv)
- ("r-jsonlite" ,r-jsonlite)
- ("r-mime" ,r-mime)
- ("r-xfun" ,r-xfun)))
+ (list r-httpuv r-jsonlite r-mime r-xfun))
(home-page "https://github.com/yihui/servr")
(synopsis "Simple HTTP server to serve static files or dynamic documents")
(description
@@ -1718,10 +1682,7 @@ a list of p-values.")
"1yv74ydyqm28gfhimmr7825sj1iaawpwsnzq05c2ma756q2dbivx"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-base64enc" ,r-base64enc)
- ("r-digest" ,r-digest)
- ("r-fastmap" ,r-fastmap)
- ("r-rlang" ,r-rlang)))
+ (list r-base64enc r-digest r-fastmap r-rlang))
(home-page "https://cran.r-project.org/web/packages/htmltools")
(synopsis "R tools for HTML")
(description
@@ -1740,11 +1701,9 @@ a list of p-values.")
"1hgz8sx8xrvfcdwa4q15k942w4qsqg8lyxbbf7qyfzbi807wcgqs"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-htmltools" ,r-htmltools)
- ("r-jsonlite" ,r-jsonlite)
- ("r-yaml" ,r-yaml)))
+ (list r-htmltools r-jsonlite r-yaml))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/ramnathv/htmlwidgets")
(synopsis "HTML Widgets for R")
(description
@@ -1766,15 +1725,15 @@ applications.")
(properties `((upstream-name . "htmlTable")))
(build-system r-build-system)
(propagated-inputs
- `(("r-checkmate" ,r-checkmate)
- ("r-htmltools" ,r-htmltools)
- ("r-htmlwidgets" ,r-htmlwidgets)
- ("r-knitr" ,r-knitr)
- ("r-magrittr" ,r-magrittr)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-stringr" ,r-stringr)))
+ (list r-checkmate
+ r-htmltools
+ r-htmlwidgets
+ r-knitr
+ r-magrittr
+ r-rstudioapi
+ r-stringr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "http://gforge.se/packages/")
(synopsis "Advanced tables for Markdown/HTML")
(description
@@ -1819,8 +1778,7 @@ if(_ca_bundle != NULL) { curl_easy_setopt(handle, CURLOPT_CAINFO, _ca_bundle); }
`(("libcurl" ,curl)
("zlib" ,zlib)))
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("r-knitr" ,r-knitr)))
+ (list pkg-config r-knitr))
(home-page "https://github.com/jeroenooms/curl")
(synopsis "HTTP client for R")
(description
@@ -1909,7 +1867,7 @@ data structures in C++.")
(properties `((upstream-name . "fastGHQuad")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)))
+ (list r-rcpp))
(home-page "https://github.com/awblocker/fastGHQuad")
(synopsis "Fast Rcpp implementation of Gauss-Hermite Quadrature")
(description
@@ -1931,16 +1889,16 @@ rules and utility functions for adaptive GH quadrature.")
(properties `((upstream-name . "rstpm2")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bbmle" ,r-bbmle)
- ("r-bh" ,r-bh)
- ("r-desolve" ,r-desolve)
- ("r-fastghquad" ,r-fastghquad)
- ("r-mgcv" ,r-mgcv)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-survival" ,r-survival)))
+ (list r-bbmle
+ r-bh
+ r-desolve
+ r-fastghquad
+ r-mgcv
+ r-rcpp
+ r-rcpparmadillo
+ r-survival))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://github.com/mclements/rstpm2")
(synopsis "Link-based survival models")
(description
@@ -1996,9 +1954,9 @@ multi-state models.")
(string-append "--outfile=" target)))
sources targets)))))))))
(propagated-inputs
- `(("r-htmltools" ,r-htmltools)))
+ (list r-htmltools))
(native-inputs
- `(("esbuild" ,esbuild)))
+ (list esbuild))
(home-page "https://cran.r-project.org/package=jquerylib")
(synopsis "Obtain jQuery as an HTML dependency object")
(description
@@ -2023,12 +1981,8 @@ jQuery.")
(properties `((upstream-name . "sass")))
(build-system r-build-system)
(propagated-inputs
- `(("r-fs" ,r-fs)
- ("r-htmltools" ,r-htmltools)
- ("r-r6" ,r-r6)
- ("r-rappdirs" ,r-rappdirs)
- ("r-rlang" ,r-rlang)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-fs r-htmltools r-r6 r-rappdirs r-rlang))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/rstudio/sass")
(synopsis "Syntactically Awesome Style Sheets (SASS)")
(description
@@ -2090,11 +2044,7 @@ language, which is stable, powerful, and CSS compatible.")
(string-append "--outfile=" target)))
sources targets)))))))))
(propagated-inputs
- `(("r-htmltools" ,r-htmltools)
- ("r-jquerylib" ,r-jquerylib)
- ("r-jsonlite" ,r-jsonlite)
- ("r-rlang" ,r-rlang)
- ("r-sass" ,r-sass)))
+ (list r-htmltools r-jquerylib r-jsonlite r-rlang r-sass))
(native-inputs
`(("esbuild" ,esbuild)
("js-bootstrap4-bundle"
@@ -2207,31 +2157,28 @@ previewing themes in real time.")
("showdown/src/showdown.js" .
"showdown/compressed/showdown.js"))))))))))
(propagated-inputs
- `(("r-bslib" ,r-bslib)
- ("r-cachem" ,r-cachem)
- ("r-commonmark" ,r-commonmark)
- ("r-crayon" ,r-crayon)
- ("r-ellipsis" ,r-ellipsis)
- ("r-fastmap" ,r-fastmap)
- ("r-fontawesome" ,r-fontawesome)
- ("r-glue" ,r-glue)
- ("r-htmltools" ,r-htmltools)
- ("r-httpuv" ,r-httpuv)
- ("r-jsonlite" ,r-jsonlite)
- ("r-later" ,r-later)
- ("r-lifecycle" ,r-lifecycle)
- ("r-mime" ,r-mime)
- ("r-promises" ,r-promises)
- ("r-r6" ,r-r6)
- ("r-rlang" ,r-rlang)
- ("r-sourcetools" ,r-sourcetools)
- ("r-withr" ,r-withr)
- ("r-xtable" ,r-xtable)))
+ (list r-bslib
+ r-cachem
+ r-commonmark
+ r-crayon
+ r-ellipsis
+ r-fastmap
+ r-fontawesome
+ r-glue
+ r-htmltools
+ r-httpuv
+ r-jsonlite
+ r-later
+ r-lifecycle
+ r-mime
+ r-promises
+ r-r6
+ r-rlang
+ r-sourcetools
+ r-withr
+ r-xtable))
(inputs
- `(("js-datatables" ,js-datatables)
- ("js-selectize" ,js-selectize)
- ("js-strftime" ,js-strftime)
- ("js-highlight" ,js-highlight)))
+ (list js-datatables js-selectize js-strftime js-highlight))
(native-inputs
`(("uglifyjs" ,node-uglify-js)
("gfortran" ,gfortran)
@@ -2307,13 +2254,9 @@ responsive, and powerful applications with minimal effort.")
sources targets))))
#t)))))
(propagated-inputs
- `(("r-htmlwidgets" ,r-htmlwidgets)
- ("r-jsonlite" ,r-jsonlite)
- ("r-promises" ,r-promises)
- ("r-shiny" ,r-shiny)
- ("r-stringr" ,r-stringr)))
+ (list r-htmlwidgets r-jsonlite r-promises r-shiny r-stringr))
(inputs
- `(("js-requirejs" ,js-requirejs)))
+ (list js-requirejs))
(native-inputs
`(("uglifyjs" ,node-uglify-js)
("js-jquery"
@@ -2357,11 +2300,9 @@ supports interactive trees, to enable rich, editable trees in Shiny.")
(invoke "esbuild" source "--minify"
(string-append "--outfile=" target)))))))))
(propagated-inputs
- `(("r-htmltools" ,r-htmltools)
- ("r-promises" ,r-promises)
- ("r-shiny" ,r-shiny)))
+ (list r-htmltools r-promises r-shiny))
(native-inputs
- `(("esbuild" ,esbuild)))
+ (list esbuild))
(home-page "https://rstudio.github.io/shinydashboard/")
(synopsis "Create dashboards with shiny")
(description "This package provides an extension to the Shiny web
@@ -2384,11 +2325,7 @@ application framework for R, making it easy to create attractive dashboards.")
(properties `((upstream-name . "shinyFiles")))
(build-system r-build-system)
(propagated-inputs
- `(("r-fs" ,r-fs)
- ("r-htmltools" ,r-htmltools)
- ("r-jsonlite" ,r-jsonlite)
- ("r-shiny" ,r-shiny)
- ("r-tibble" ,r-tibble)))
+ (list r-fs r-htmltools r-jsonlite r-shiny r-tibble))
(home-page "https://github.com/thomasp85/shinyFiles")
(synopsis "Server-side file system viewer for Shiny")
(description
@@ -2412,7 +2349,7 @@ well as file saving is available.")
"0qr9bfxw8afxns44i2j4msignf6g5qb2nzpay2lpv343rrlqbmip"))))
(properties `((upstream-name . "shinythemes")))
(build-system r-build-system)
- (propagated-inputs `(("r-shiny" ,r-shiny)))
+ (propagated-inputs (list r-shiny))
(home-page "https://rstudio.github.io/shinythemes/")
(synopsis "Themes for Shiny")
(description
@@ -2469,10 +2406,7 @@ Bootstrap themes, which are packaged for use with Shiny applications.")
(string-append "--outfile=" target)))
sources targets)))))))))
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-htmltools" ,r-htmltools)
- ("r-rlang" ,r-rlang)
- ("r-tidyr" ,r-tidyr)))
+ (list r-dplyr r-htmltools r-rlang r-tidyr))
(native-inputs
`(("esbuild" ,esbuild)
("d3.v3.js"
@@ -2540,10 +2474,7 @@ R objects into the JSON format that the d3.js library expects.")
"0jrcnfax321pszbpjdifnkbrgbjr43bjzvlzv1p5a8wskksqwiyx"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-d3r" ,r-d3r)
- ("r-htmlwidgets" ,r-htmlwidgets)
- ("r-shiny" ,r-shiny)
- ("r-magrittr" ,r-magrittr)))
+ (list r-d3r r-htmlwidgets r-shiny r-magrittr))
(home-page "https://github.com/fbreitwieser/sankeyD3")
(synopsis "Sankey network graphs from R")
(description
@@ -2588,8 +2519,7 @@ from Wes Anderson movies.")
(properties `((upstream-name . "gg.gap")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cowplot" ,r-cowplot)
- ("r-ggplot2" ,r-ggplot2)))
+ (list r-cowplot r-ggplot2))
(home-page "https://github.com/ChrisLou-bioinfo/gg.gap")
(synopsis "Define segments on the y-axis for ggplot2")
(description
@@ -2642,9 +2572,7 @@ in a ggplot2 plot.")
sources targets))))
#t)))))
(propagated-inputs
- `(("r-htmltools" ,r-htmltools)
- ("r-knitr" ,r-knitr)
- ("r-shiny" ,r-shiny)))
+ (list r-htmltools r-knitr r-shiny))
(native-inputs
`(("esbuild" ,esbuild)
("js-requirejs"
@@ -2686,10 +2614,7 @@ contained in the navigation bar.")
(properties `((upstream-name . "spelling")))
(build-system r-build-system)
(propagated-inputs
- `(("r-commonmark" ,r-commonmark)
- ("r-hunspell" ,r-hunspell)
- ("r-knitr" ,r-knitr)
- ("r-xml2" ,r-xml2)))
+ (list r-commonmark r-hunspell r-knitr r-xml2))
(home-page "https://docs.ropensci.org/spelling/")
(synopsis "Tools for spell checking in R")
(description
@@ -2715,10 +2640,7 @@ punctuation.")
"180y7mhpj17axpadwhh7s0qvrpdnag7g977vk256l96d6nmvlds2"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-htmltools" ,r-htmltools)
- ("r-jsonlite" ,r-jsonlite)
- ("r-lazyeval" ,r-lazyeval)
- ("r-r6" ,r-r6)))
+ (list r-htmltools r-jsonlite r-lazyeval r-r6))
(home-page "https://rstudio.github.io/crosstalk/")
(synopsis "Inter-widget interactivity for HTML widgets")
(description
@@ -2740,7 +2662,7 @@ files). It currently supports linked brushing and filtering.")
"00s9a0kr9rwxvlq433daxjk4ji8m0w60hjdprf502msw9kxfrx00"))))
(properties `((upstream-name . "Rook")))
(build-system r-build-system)
- (propagated-inputs `(("r-brew" ,r-brew)))
+ (propagated-inputs (list r-brew))
(home-page "https://cran.r-project.org/web/packages/Rook")
(synopsis "Web server interface for R")
(description
@@ -2765,8 +2687,7 @@ named elements: the @code{status}, the @code{headers}, and the @code{body}.")
(properties `((upstream-name . "miniUI")))
(build-system r-build-system)
(propagated-inputs
- `(("r-htmltools" ,r-htmltools)
- ("r-shiny" ,r-shiny)))
+ (list r-htmltools r-shiny))
(home-page "https://cran.r-project.org/web/packages/miniUI/")
(synopsis "Shiny UI widgets for small screens")
(description
@@ -2787,9 +2708,7 @@ work well on small screens.")
"1gxd0h2m56sjjlzn4dry6s13nddxc4l5i11gsvavaf2dwbahdzsh"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-hms" ,r-hms)
- ("r-rcpp" ,r-rcpp)
- ("r-tibble" ,r-tibble)))
+ (list r-hms r-rcpp r-tibble))
(home-page "https://github.com/wesm/feather")
(synopsis "R Bindings to the Feather API")
(description "Read and write feather files, a lightweight binary columnar
@@ -2827,7 +2746,7 @@ Projection code and larger maps are in separate packages (@code{mapproj} and
(base32
"0nscsfq8md6ri9258xz57c3dj81wdl6kdwf4a9qcrwwbn20i427h"))))
(build-system r-build-system)
- (propagated-inputs `(("r-maps" ,r-maps)))
+ (propagated-inputs (list r-maps))
(home-page "https://cran.r-project.org/web/packages/mapproj")
(synopsis "Map projection in R")
(description "This package converts latitude/longitude into projected
@@ -2851,8 +2770,7 @@ coordinates.")
(properties `((upstream-name . "RgoogleMaps")))
(build-system r-build-system)
(propagated-inputs
- `(("r-png" ,r-png)
- ("r-sp" ,r-sp)))
+ (list r-png r-sp))
(home-page "https://cran.r-project.org/web/packages/RgoogleMaps")
(synopsis "Use Google Maps in R")
(description "This package serves two purposes:
@@ -2876,7 +2794,7 @@ coordinates.")
(base32
"0bg4vfmrw140j2ax0p6bflvb77w03ir39wa87l96rj473jpa9hzj"))))
(build-system r-build-system)
- (propagated-inputs `(("r-sp" ,r-sp)))
+ (propagated-inputs (list r-sp))
(home-page "https://cran.r-project.org/web/packages/geosphere")
(synopsis "Spherical trigonometry")
(description "This package computes spherical trigonometry for geographic
@@ -2917,23 +2835,23 @@ files and in-memory raw vectors.")
"13dmzl6z62pzjiffilarkji46vy0sacxa8a7mhrhc3biq3ylzhln"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-bitops" ,r-bitops)
- ("r-digest" ,r-digest)
- ("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-glue" ,r-glue)
- ("r-httr" ,r-httr)
- ("r-jpeg" ,r-jpeg)
- ("r-magrittr" ,r-magrittr)
- ("r-plyr" ,r-plyr)
- ("r-png" ,r-png)
- ("r-purrr" ,r-purrr)
- ("r-rgooglemaps" ,r-rgooglemaps)
- ("r-rjson" ,r-rjson)
- ("r-scales" ,r-scales)
- ("r-stringr" ,r-stringr)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)))
+ (list r-bitops
+ r-digest
+ r-dplyr
+ r-ggplot2
+ r-glue
+ r-httr
+ r-jpeg
+ r-magrittr
+ r-plyr
+ r-png
+ r-purrr
+ r-rgooglemaps
+ r-rjson
+ r-scales
+ r-stringr
+ r-tibble
+ r-tidyr))
(home-page "https://github.com/dkahle/ggmap")
(synopsis "Spatial visualization with ggplot2")
(description "This package provides a collection of functions to visualize
@@ -2967,18 +2885,18 @@ including functions for geolocation and routing.")
(substitute* "src/Makevars"
(("-lz") "-lreadstat")))))))
(inputs
- `(("readstat" ,readstat)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
- (propagated-inputs
- `(("r-cpp11" ,r-cpp11)
- ("r-forcats" ,r-forcats)
- ("r-hms" ,r-hms)
- ("r-rlang" ,r-rlang)
- ("r-readr" ,r-readr)
- ("r-tibble" ,r-tibble)
- ("r-tidyselect" ,r-tidyselect)
- ("r-vctrs" ,r-vctrs)))
+ (list readstat))
+ (native-inputs
+ (list r-knitr))
+ (propagated-inputs
+ (list r-cpp11
+ r-forcats
+ r-hms
+ r-rlang
+ r-readr
+ r-tibble
+ r-tidyselect
+ r-vctrs))
(home-page "https://haven.tidyverse.org")
(synopsis "Import and export SPSS, Stata and SAS files")
(description
@@ -2998,7 +2916,7 @@ including functions for geolocation and routing.")
"0zpcb73w413na23f6giml9311jh0j0y766w2fh9i40d2h7bbvyvs"))))
(build-system r-build-system)
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "http://mulcyber.toulouse.inra.fr/projects/amap/")
(synopsis "Another multidimensional analysis package")
(description "This package provides tools for clustering and principal
@@ -3018,9 +2936,7 @@ component analysis (with robust methods, and parallelized functions).")
"16i9sny7j90zi0k3znfff5lpnj5naxcy1142v73zxslr9g3h3am3"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-lattice" ,r-lattice)
- ("r-nlme" ,r-nlme)
- ("r-rcpp" ,r-rcpp)))
+ (list r-lattice r-nlme r-rcpp))
(home-page "http://ape-package.ird.fr/")
(synopsis "Analyses of phylogenetics and evolution")
(description
@@ -3045,12 +2961,12 @@ and several other tools.")
(properties `((upstream-name . "abbyyR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-curl" ,r-curl)
- ("r-httr" ,r-httr)
- ("r-plyr" ,r-plyr)
- ("r-progress" ,r-progress)
- ("r-readr" ,r-readr)
- ("r-xml" ,r-xml)))
+ (list r-curl
+ r-httr
+ r-plyr
+ r-progress
+ r-readr
+ r-xml))
(home-page "https://github.com/soodoku/abbyyR")
(synopsis "Access to Abbyy Optical Character Recognition (OCR) API")
(description
@@ -3073,7 +2989,7 @@ XML. To learn more about the Abbyy OCR API, see @url{http://ocrsdk.com/}.")
(base32 "0fhq2aykdkxh3r90i8aqjyb37p5api3mjd19ch8mzv99q4pcv4dq"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/colorspace")
(synopsis "Color space manipulation")
(description
@@ -3144,7 +3060,7 @@ Station Long Term Ecological Research (LTER) Program.")
"0z4dic94ar646w7zc2ggi5hgvf2qnznsani94c5pyql8zspz47lc"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-boot" ,r-boot)))
+ (list r-boot))
(home-page "https://github.com/phgrosjean/pastecs")
(synopsis "Analysis of space-time ecological series")
(description
@@ -3165,12 +3081,12 @@ initiative to bring PASSTEC 2000 functionalities to R.")
"1b73s5l19yicwginqsg5xr7fzb005x372n0wb34kk6jb5x5lbsdj"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-formula" ,r-formula)
- ("r-inum" ,r-inum)
- ("r-libcoin" ,r-libcoin)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-rpart" ,r-rpart)
- ("r-survival" ,r-survival)))
+ (list r-formula
+ r-inum
+ r-libcoin
+ r-mvtnorm
+ r-rpart
+ r-survival))
(home-page "http://partykit.R-Forge.R-project.org/partykit")
(synopsis "Toolkit for recursive partytioning")
(description
@@ -3263,14 +3179,14 @@ processes. Most of its code is based on the @code{psutil} Python package.")
(base32 "0qx920h2viwjg10va81nj0xja495d8ni6vcc25ggvzki6a6k069f"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-callr" ,r-callr)
- ("r-cli" ,r-cli)
- ("r-crayon" ,r-crayon)
- ("r-desc" ,r-desc)
- ("r-prettyunits" ,r-prettyunits)
- ("r-r6" ,r-r6)
- ("r-rprojroot" ,r-rprojroot)
- ("r-withr" ,r-withr)))
+ (list r-callr
+ r-cli
+ r-crayon
+ r-desc
+ r-prettyunits
+ r-r6
+ r-rprojroot
+ r-withr))
(home-page "https://github.com/r-pkgs/pkgbuild")
(synopsis "Find tools needed to build R packages")
(description
@@ -3292,13 +3208,13 @@ is configured appropriately so R can use them.")
"0jdkaj5cl0viy0i0hkcm4n2wlg1mfv3camr7f385njfararfanhh"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-cli" ,r-cli)
- ("r-crayon" ,r-crayon)
- ("r-desc" ,r-desc)
- ("r-rlang" ,r-rlang)
- ("r-rprojroot" ,r-rprojroot)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-withr" ,r-withr)))
+ (list r-cli
+ r-crayon
+ r-desc
+ r-rlang
+ r-rprojroot
+ r-rstudioapi
+ r-withr))
(home-page "https://github.com/r-lib/pkgload")
(synopsis "Simulate package installation and attach")
(description
@@ -3384,8 +3300,7 @@ safely be interrupted from R.")
"1a92fql6mijhnr1kxkcxwivf95pk9lhgmhzkshs51h0ybfv5krik"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)))
+ (list r-rcpp r-rcppeigen))
(home-page "https://github.com/yixuan/RcppNumerical")
(synopsis"Numerical computing libraries integration with @code{Rcpp}")
(description "This package provides a collection of libraries for numerical
@@ -3425,9 +3340,7 @@ where the bound function accepts additional arguments.")
"0rz4ibjdjsxl99ff3ha79z7cnjmilx4rx58fk9kk7ld9xc4hf4s8"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-bindr" ,r-bindr)
- ("r-plogr" ,r-plogr)
- ("r-rcpp" ,r-rcpp)))
+ (list r-bindr r-plogr r-rcpp))
(home-page "https://github.com/krlmlr/bindrcpp")
(synopsis "Rcpp interface to active bindings")
(description
@@ -3471,7 +3384,7 @@ is provided.")
(base32 "19kgrnsyq67iqv1biyssqi30a6v2836ql20nabpy2m692ns0jfvi"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)))
+ (list r-mass))
(home-page "https://cran.r-project.org/web/packages/calibrate")
(synopsis "Calibration of scatterplot and biplot axes")
(description
@@ -3511,7 +3424,7 @@ ellipses, circles, cylinders, arrows, ...")
(properties `((upstream-name . "GlobalOptions")))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/jokergoo/GlobalOptions")
(synopsis "Generate functions to get or set global options")
(description
@@ -3532,11 +3445,9 @@ validation and filtering on the values, making options invisible or private.")
"16rnqlkgzhnm69y70k9fiz8vvwlm5dyng04hlxqvvaxix3wdpfkc"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-colorspace" ,r-colorspace)
- ("r-globaloptions" ,r-globaloptions)
- ("r-shape" ,r-shape)))
+ (list r-colorspace r-globaloptions r-shape))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/jokergoo/circlize")
(synopsis "Circular visualization")
(description
@@ -3564,9 +3475,9 @@ multi-dimensional data.")
(properties `((upstream-name . "poweRlaw")))
(build-system r-build-system)
(propagated-inputs
- `(("r-pracma" ,r-pracma)))
+ (list r-pracma))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/csgillespie/poweRlaw")
(synopsis "Tools for the analysis of heavy tailed distributions")
(description
@@ -3611,11 +3522,9 @@ rows, dropping names) to see if the modified versions are identical.")
"06wjs8451hmnimzgngpzbai3yrgy33133vzzapa8jib9crdqi8sb"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-magrittr" ,r-magrittr)
- ("r-viridis" ,r-viridis)))
+ (list r-ggplot2 r-magrittr r-viridis))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/dendextend")
(synopsis "Extending 'dendrogram' functionality in R")
(description
@@ -3641,13 +3550,11 @@ compare different dendrograms to one another.")
(properties `((upstream-name . "GetoptLong")))
(build-system r-build-system)
(inputs
- `(("perl" ,perl)))
+ (list perl))
(propagated-inputs
- `(("r-crayon" ,r-crayon)
- ("r-globaloptions" ,r-globaloptions)
- ("r-rjson" ,r-rjson)))
+ (list r-crayon r-globaloptions r-rjson))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/jokergoo/GetoptLong")
(synopsis "Parsing command-line arguments and variable interpolation")
(description
@@ -3689,7 +3596,7 @@ any subsequent lookup as it keeps the hash table in memory.")
(base32
"0dsh6llfdz04w94xr3yl2b4vkk9g3rwhvfnxcd025v2424krxfls"))))
(build-system r-build-system)
- (propagated-inputs `(("r-bit" ,r-bit)))
+ (propagated-inputs (list r-bit))
(home-page "http://ff.r-forge.r-project.org/")
(synopsis "Memory-efficient storage of large data on disk and access functions")
(description
@@ -3713,9 +3620,7 @@ in main memory.")
"1dp6lblfq2j7r1b4b8ls47jlx8j27n88d5vp8w116lb8pa01zxmk"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-bit" ,r-bit)
- ("r-fastmatch" ,r-fastmatch)
- ("r-ff" ,r-ff)))
+ (list r-bit r-fastmatch r-ff))
(home-page "https://github.com/edwindj/ffbase")
(synopsis "Basic statistical functions for package 'ff'")
(description
@@ -3754,7 +3659,7 @@ quantities.")
"0wzk329bxljkzz57y220lsfckpsn45w348m6dcxh29zbj0ik65h2"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)))
+ (list r-rcpp))
(home-page "https://github.com/rcannood/princurve")
(synopsis "Fit a principal curve in arbitrary dimension")
(description "This package provides procedures for fitting a principal
@@ -3774,8 +3679,7 @@ curve to a data matrix in arbitrary dimensions.")
"0s6i0sqxg1vldxs6miv8mi0zydxbqzgpmzfiwkj8y7jix3yrfmad"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-plyr" ,r-plyr)
- ("r-rcpp" ,r-rcpp)))
+ (list r-plyr r-rcpp))
(home-page "http://had.co.nz/reshape")
(synopsis "Flexibly reshape data")
(description
@@ -3795,15 +3699,15 @@ curve to a data matrix in arbitrary dimensions.")
(base32 "1486hrzj5q5w4nbrsbqlv7vv20ly01y90qc2vygl5syzwvyjd422"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-checkmate" ,r-checkmate)
- ("r-jsonlite" ,r-jsonlite)
- ("r-mime" ,r-mime)
- ("r-r6" ,r-r6)
- ("r-rcpp" ,r-rcpp)
- ("r-rserve" ,r-rserve)
- ("r-uuid" ,r-uuid)))
+ (list r-checkmate
+ r-jsonlite
+ r-mime
+ r-r6
+ r-rcpp
+ r-rserve
+ r-uuid))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://restrserve.org")
(synopsis "R web API framework")
(description
@@ -3826,10 +3730,7 @@ parallel - each request in a separate fork.")
"0dgzb362641aqm8xd88iqa8jmpdm43xs0aba0d5kk6fvapnxi95l"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-crayon" ,r-crayon)
- ("r-hms" ,r-hms)
- ("r-prettyunits" ,r-prettyunits)
- ("r-r6" ,r-r6)))
+ (list r-crayon r-hms r-prettyunits r-r6))
(home-page "https://github.com/gaborcsardi/progress")
(synopsis "Terminal progress bars")
(description
@@ -3853,20 +3754,20 @@ package also provides a C++ API, that works with or without Rcpp.")
(properties `((upstream-name . "GGally")))
(build-system r-build-system)
(inputs
- `(("openssl" ,openssl)))
- (propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-forcats" ,r-forcats)
- ("r-ggplot2" ,r-ggplot2)
- ("r-gtable" ,r-gtable)
- ("r-lifecycle" ,r-lifecycle)
- ("r-plyr" ,r-plyr)
- ("r-progress" ,r-progress)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-reshape" ,r-reshape)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)
- ("r-tidyr" ,r-tidyr)))
+ (list openssl))
+ (propagated-inputs
+ (list r-dplyr
+ r-forcats
+ r-ggplot2
+ r-gtable
+ r-lifecycle
+ r-plyr
+ r-progress
+ r-rcolorbrewer
+ r-reshape
+ r-rlang
+ r-scales
+ r-tidyr))
(home-page "https://ggobi.github.io/ggally")
(synopsis "Extension to ggplot2")
(description
@@ -3910,9 +3811,9 @@ most popular ones.")
(base32 "09m2ddbrbs2aqnq5si42ipa0g1vbd0pxg4zbcx59is2047pv7sws"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-lattice" ,r-lattice)))
+ (list r-lattice))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/sp")
(synopsis "Classes and methods for spatial data")
(description
@@ -3981,9 +3882,9 @@ matrices.")
(add-before 'install 'mpi-setup
,%openmpi-setup))))
(inputs
- `(("openmpi" ,openmpi)))
+ (list openmpi))
(native-inputs
- `(("pkg-config" ,pkg-config)))
+ (list pkg-config))
(home-page "http://www.stats.uwo.ca/faculty/yu/Rmpi")
(synopsis "R interface to message-passing interface (MPI)")
(description
@@ -4005,8 +3906,7 @@ provides an interactive R manager and worker environment.")
(properties `((upstream-name . "Lmoments")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)))
+ (list r-rcpp r-rcpparmadillo))
(home-page "http://www.tilastotiede.fi/juha_karvanen.html")
(synopsis "L-moments and quantile mixtures")
(description
@@ -4070,8 +3970,7 @@ which should be seen for details.")
(properties `((upstream-name . "extRemes")))
(build-system r-build-system)
(propagated-inputs
- `(("r-distillery" ,r-distillery)
- ("r-lmoments" ,r-lmoments)))
+ (list r-distillery r-lmoments))
(home-page "https://www.assessment.ucar.edu/toolkit/")
(synopsis "Extreme value analysis")
(description
@@ -4093,9 +3992,9 @@ or excesses over a high threshold.")
"126l0y7j2iy6g1w4zii1qkfcjq6wrnc3w2li0bz376smpryddy3i"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-zoo" ,r-zoo)))
+ (list r-zoo))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/lmtest")
(synopsis "Testing linear regression models")
(description
@@ -4157,7 +4056,7 @@ and S4 methods with inlined C, C++ or Fortran code supporting @code{.C} and
"1khkzja8lwn9075864vbyajqina9m588ahf1fsrrajrsqilyzssz"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-libcoin" ,r-libcoin)))
+ (list r-libcoin))
(home-page "https://cran.r-project.org/web/packages/inum/")
(synopsis "Interval and enum-type representation of vectors")
(description
@@ -4217,14 +4116,14 @@ matrices, a special case of sparse matrices.")
"1bck8rmink4wsk8pcbnj4d60svxymp29pxbzwj8p9gzsg42c1v81"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-bdsmatrix" ,r-bdsmatrix)
- ("r-lattice" ,r-lattice)
- ("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-numderiv" ,r-numderiv)))
+ (list r-bdsmatrix
+ r-lattice
+ r-mass
+ r-matrix
+ r-mvtnorm
+ r-numderiv))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/bbmle")
(synopsis "Tools for General Maximum Likelihood Estimation")
(description
@@ -4247,11 +4146,7 @@ classes in the @code{stats4} package.")
"0ls3zxxlwmdv7zn1v9i1y9zc2sn0hbgmyjvsj7zn3ajsw7wwlih6"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-bbmle" ,r-bbmle)
- ("r-coda" ,r-coda)
- ("r-lattice" ,r-lattice)
- ("r-mass" ,r-mass)
- ("r-plyr" ,r-plyr)))
+ (list r-bbmle r-coda r-lattice r-mass r-plyr))
(home-page "http://www.math.mcmaster.ca/bolker/emdbook")
(synopsis "Support functions and data for \"Ecological Models and Data\"")
(description
@@ -4297,10 +4192,8 @@ transportation problems.")
(properties `((upstream-name . "limSolve")))
(build-system r-build-system)
(propagated-inputs
- `(("r-lpsolve" ,r-lpsolve)
- ("r-mass" ,r-mass)
- ("r-quadprog" ,r-quadprog)))
- (native-inputs `(("gfortran" ,gfortran)))
+ (list r-lpsolve r-mass r-quadprog))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/limSolve")
(synopsis "Solving linear inverse models")
(description
@@ -4330,10 +4223,9 @@ functions from LINPACK.")
"1glnbcm1gghzgvzpxcfsmn7dp2f9jqyx39n3ydwp9fx38409khhp"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)
- ("r-survival" ,r-survival)))
+ (list r-mass r-survival))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "http://riskassessment.r-forge.r-project.org")
(synopsis "Fitting a parametric distribution from data")
(description
@@ -4360,9 +4252,7 @@ data). Weighted versions of MLE, MME and QME are available.")
"12a7gy681aq3l55iys044cs6sn1s2l5qihghpdl01cvv0ggfh26y"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-boot" ,r-boot)
- ("r-gsl" ,r-gsl)
- ("r-rcpp" ,r-rcpp)))
+ (list r-boot r-gsl r-rcpp))
(home-page "https://cran.r-project.org/web/packages/energy")
(synopsis "Multivariate inference via the energy of data")
(description
@@ -4415,7 +4305,7 @@ George Marsaglia are included.")
(properties `((upstream-name . "kSamples")))
(build-system r-build-system)
(propagated-inputs
- `(("r-suppdists" ,r-suppdists)))
+ (list r-suppdists))
(home-page "https://cran.r-project.org/web/packages/kSamples")
(synopsis "K-Sample rank tests and their combinations")
(description
@@ -4443,8 +4333,7 @@ samples.")
(properties `((upstream-name . "CVST")))
(build-system r-build-system)
(propagated-inputs
- `(("r-kernlab" ,r-kernlab)
- ("r-matrix" ,r-matrix)))
+ (list r-kernlab r-matrix))
(home-page "https://cran.r-project.org/web/packages/CVST")
(synopsis "Fast cross-validation via sequential testing")
(description
@@ -4496,7 +4385,7 @@ available in a vignette.")
(properties `((upstream-name . "progressr")))
(build-system r-build-system)
(propagated-inputs
- `(("r-digest" ,r-digest)))
+ (list r-digest))
(home-page "https://progressr.futureverse.org")
(synopsis "Inclusive, unifying API for progress updates")
(description
@@ -4521,13 +4410,9 @@ these progress updates.")
"0bi3c1aqwlq7jbz4raz6vga4r264w7lldi0i62xjlbl7hnlgi23s"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-future-apply" ,r-future-apply)
- ("r-numderiv" ,r-numderiv)
- ("r-progressr" ,r-progressr)
- ("r-squarem" ,r-squarem)
- ("r-survival" ,r-survival)))
+ (list r-future-apply r-numderiv r-progressr r-squarem r-survival))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/kkholst/lava")
(synopsis "Latent variable models")
(description
@@ -4549,9 +4434,7 @@ variable models.")
(properties `((upstream-name . "DRR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cvst" ,r-cvst)
- ("r-kernlab" ,r-kernlab)
- ("r-matrix" ,r-matrix)))
+ (list r-cvst r-kernlab r-matrix))
(home-page "https://cran.r-project.org/web/packages/DRR")
(synopsis "Dimensionality reduction via regression")
(description
@@ -4572,10 +4455,7 @@ regression using Kernel Ridge Regression.")
"03wvh3kirp1prac5nky6a5whs97rvaf4hc27x0fnh51sa17r42b8"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-kernsmooth" ,r-kernsmooth)
- ("r-lava" ,r-lava)
- ("r-rcpp" ,r-rcpp)
- ("r-survival" ,r-survival)))
+ (list r-kernsmooth r-lava r-rcpp r-survival))
(home-page "https://cran.r-project.org/web/packages/prodlim")
(synopsis "Product-limit estimation for censored event history analysis")
(description
@@ -4598,8 +4478,7 @@ the Kaplan-Meier and Aalen-Johansen methods.")
(properties `((upstream-name . "dimRed")))
(build-system r-build-system)
(propagated-inputs
- `(("r-drr" ,r-drr)
- ("r-magrittr" ,r-magrittr)))
+ (list r-drr r-magrittr))
(home-page "https://github.com/gdkrmr/dimRed")
(synopsis "Framework for dimensionality reduction")
(description
@@ -4642,7 +4521,7 @@ calendar objects.")
"0snmdh6vk0p6ar1swsihisinxrx7l8371dri5lk0z24ysgr5w7gs"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-abind" ,r-abind)))
+ (list r-abind))
(home-page "https://github.com/RobinHankin/magic.git")
(synopsis "Create and investigate magic squares")
(description
@@ -4669,7 +4548,7 @@ dimensioned arrays.")
`(("mariadb-dev" ,mariadb "dev")
("zlib" ,zlib)))
(propagated-inputs
- `(("r-dbi" ,r-dbi)))
+ (list r-dbi))
(home-page "https://github.com/r-dbi/RMySQL")
(synopsis "Database interface and MySQL driver for R")
(description
@@ -4693,9 +4572,9 @@ the RMariaDB package.")
(properties `((upstream-name . "RPostgreSQL")))
(build-system r-build-system)
(inputs
- `(("postgresql" ,postgresql)))
+ (list postgresql))
(propagated-inputs
- `(("r-dbi" ,r-dbi)))
+ (list r-dbi))
(home-page "https://github.com/tomoakin/RPostgreSQL")
(synopsis "R interface to the PostgreSQL database system")
(description
@@ -4717,7 +4596,7 @@ to access PostgreSQL database systems.")
(base32
"1ki14an0pmhs2mnmfjjvdzd76pshiyvi659zf7hqvqwj0viv4dw9"))))
(build-system r-build-system)
- (propagated-inputs `(("r-lpsolve" ,r-lpsolve)))
+ (propagated-inputs (list r-lpsolve))
(home-page "http://linprog.r-forge.r-project.org/")
(synopsis "Linear programming and optimization")
(description
@@ -4738,11 +4617,7 @@ Optimization problems by using the simplex algorithm.")
"1n10l8ax3783v3lgaacb15qsn8b3f0wpmhg3k39j31s6ciyd3vcg"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-magic" ,r-magic)
- ("r-linprog" ,r-linprog)
- ("r-lpsolve" ,r-lpsolve)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppprogress" ,r-rcppprogress)))
+ (list r-magic r-linprog r-lpsolve r-rcpp r-rcppprogress))
(home-page "http://geometry.r-forge.r-project.org/")
(synopsis "Mesh generator and surface tessellator")
(description
@@ -4773,15 +4648,15 @@ Delaunay triangulation and convex hull computation.")
"1sdnb47r534nh138zk3a6b2mgi74nvshc7p5m304vjs9jlx4l2y3"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-bh" ,r-bh)
- ("r-class" ,r-class)
- ("r-geometry" ,r-geometry)
- ("r-mass" ,r-mass)
- ("r-rcpp" ,r-rcpp)
- ("r-robustbase" ,r-robustbase)
- ("r-sfsmisc" ,r-sfsmisc)))
+ (list r-bh
+ r-class
+ r-geometry
+ r-mass
+ r-rcpp
+ r-robustbase
+ r-sfsmisc))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/ddalpha")
(synopsis "Depth-Based classification and calculation of data depth")
(description
@@ -4828,7 +4703,7 @@ Core algorithms are executed in parallel on systems supporting OpenMP.")
(properties `((upstream-name . "RcppRoll")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)))
+ (list r-rcpp))
(home-page "https://cran.r-project.org/web/packages/RcppRoll")
(synopsis "Efficient rolling and windowed operations")
(description
@@ -4851,12 +4726,12 @@ provided.")
"0hsq00382pfd9hzpcgphjxazbxm4zx0k2r6pk6kib56k0ibm7qfn"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-class" ,r-class)
- ("r-mass" ,r-mass)
- ("r-nnet" ,r-nnet)
- ("r-prodlim" ,r-prodlim)
- ("r-rpart" ,r-rpart)
- ("r-survival" ,r-survival)))
+ (list r-class
+ r-mass
+ r-nnet
+ r-prodlim
+ r-rpart
+ r-survival))
(home-page "https://cran.r-project.org/web/packages/ipred")
(synopsis "Improved predictors")
(description
@@ -4878,11 +4753,9 @@ problems as well as resampling based estimators of prediction error.")
"032h33i2qlwsw2iq82nri5y8hs7d593w40aghcvnibpi2wxf0x8l"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-lattice" ,r-lattice)
- ("r-mnormt" ,r-mnormt)
- ("r-nlme" ,r-nlme)))
+ (list r-lattice r-mnormt r-nlme))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/psych/")
(synopsis "Procedures for psychological, psychometric, and personality research")
(description
@@ -4933,19 +4806,19 @@ by base R methods related to model fitting.")
"0ks64xwkaqh5cinq8j56d89rn9kipm7cdipsgqmz9xxy7ajxb7qj"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-backports" ,r-backports)
- ("r-dplyr" ,r-dplyr)
- ("r-ellipsis" ,r-ellipsis)
- ("r-generics" ,r-generics)
- ("r-ggplot2" ,r-ggplot2)
- ("r-glue" ,r-glue)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-stringr" ,r-stringr)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)))
+ (list r-backports
+ r-dplyr
+ r-ellipsis
+ r-generics
+ r-ggplot2
+ r-glue
+ r-purrr
+ r-rlang
+ r-stringr
+ r-tibble
+ r-tidyr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/tidyverse/broom")
(synopsis "Convert statistical analysis objects into tidy data frames")
(description
@@ -4972,26 +4845,26 @@ provides a one-row summary of model-level statistics.")
"0gbdc5kvbn14s5zrf4vrdjvkfajs00p7vvb433ii0lqnl07bl87d"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-ellipsis" ,r-ellipsis)
- ("r-generics" ,r-generics)
- ("r-glue" ,r-glue)
- ("r-gower" ,r-gower)
- ("r-ipred" ,r-ipred)
- ("r-lifecycle" ,r-lifecycle)
- ("r-lubridate" ,r-lubridate)
- ("r-magrittr" ,r-magrittr)
- ("r-matrix" ,r-matrix)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)
- ("r-tidyselect" ,r-tidyselect)
- ("r-timedate" ,r-timedate)
- ("r-vctrs" ,r-vctrs)
- ("r-withr" ,r-withr)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-dplyr
+ r-ellipsis
+ r-generics
+ r-glue
+ r-gower
+ r-ipred
+ r-lifecycle
+ r-lubridate
+ r-magrittr
+ r-matrix
+ r-purrr
+ r-rlang
+ r-tibble
+ r-tidyr
+ r-tidyselect
+ r-timedate
+ r-vctrs
+ r-withr))
+ (native-inputs
+ (list r-knitr))
(home-page "https://github.com/topepo/recipes")
(synopsis "Preprocessing tools to create design matrices")
(description
@@ -5040,12 +4913,9 @@ for certain use cases.")
"1z5xyr5f4aryy0v1gzz9m8m4s5fzzwbrf0fxll1nbflr8xnr3yr9"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-rcpp" ,r-rcpp)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)))
+ (list r-ggplot2 r-rcpp r-rlang r-scales))
(native-inputs
- `(("r-knitr" ,r-knitr))) ; for vignettes
+ (list r-knitr)) ; for vignettes
(home-page "https://github.com/slowkow/ggrepel")
(synopsis "Repulsive text and label geometries for ggplot2")
(description
@@ -5067,7 +4937,7 @@ from the data points.")
"1g98jk6xsl08z4n6sy5vriif99m31zhbz7j3dh1kfj4w7yb9zh78"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/taiyun/corrplot")
(synopsis "Visualization of a correlation matrix")
(description
@@ -5113,7 +4983,7 @@ or between integer vectors representing generic sequences.")
(base32
"01vggwg1w71k98qs6fhb0x1843vi322mf4g3hbclks94kcpkisx2"))))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/ucminf/")
(synopsis "General-purpose unconstrained non-linear optimization")
(description
@@ -5138,14 +5008,14 @@ with the package @code{optim}.")
(properties `((upstream-name . "useful")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertthat" ,r-assertthat)
- ("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-magrittr" ,r-magrittr)
- ("r-matrix" ,r-matrix)
- ("r-plyr" ,r-plyr)
- ("r-purrr" ,r-purrr)
- ("r-scales" ,r-scales)))
+ (list r-assertthat
+ r-dplyr
+ r-ggplot2
+ r-magrittr
+ r-matrix
+ r-plyr
+ r-purrr
+ r-scales))
(home-page "https://github.com/jaredlander/useful")
(synopsis "Collection of handy, useful functions")
(description "This package provides a set of little functions that have been
@@ -5168,10 +5038,7 @@ response matrices.")
"09bpmjmbf4x82kgf6bm4bkncq2apdv9mk20zj4zgma2jx2vyfhbs"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-numderiv" ,r-numderiv)
- ("r-ucminf" ,r-ucminf)))
+ (list r-mass r-matrix r-numderiv r-ucminf))
(home-page "https://github.com/runehaubo/ordinal")
(synopsis "Regression models for ordinal data")
(description
@@ -5195,10 +5062,7 @@ Laplace approximation and adaptive Gauss-Hermite quadrature.")
"1sbcpacxnxbzwa8rr9x2bq7hh0s3sw6yznr90dkp43n6xk5xaqir"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-lme4" ,r-lme4)
- ("r-mass" ,r-mass)
- ("r-ordinal" ,r-ordinal)
- ("r-survival" ,r-survival)))
+ (list r-lme4 r-mass r-ordinal r-survival))
(home-page "https://cran.r-project.org/web/packages/jomo/")
(synopsis "Multilevel Joint Modelling Multiple Imputation")
(description
@@ -5222,7 +5086,7 @@ impute compatibly with the substantive model.")
(base32
"1dk3jjj826p7xrz10qz04vyc068xnypg7bp0pj4c32z3da0xzh5d"))))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/pan/")
(synopsis "Multiple imputation for multivariate panel or clustered data")
(description
@@ -5243,11 +5107,9 @@ clustered data.")
"00i18nnvrdrg91crgcp2a431xs71cawaip3xkqk2myv0iav3xga9"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-haven" ,r-haven)
- ("r-jomo" ,r-jomo)
- ("r-pan" ,r-pan)))
+ (list r-haven r-jomo r-pan))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/mitml/")
(synopsis "Tools for multiple imputation in multilevel modeling")
(description
@@ -5270,14 +5132,14 @@ analysis of multiply imputed data sets.")
"11cpyqlilakan2pwjzacb9jjlazazsqdngy237nnrj8j6mky822i"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-broom" ,r-broom)
- ("r-cpp11" ,r-cpp11)
- ("r-dplyr" ,r-dplyr)
- ("r-generics" ,r-generics)
- ("r-lattice" ,r-lattice)
- ("r-rcpp" ,r-rcpp)
- ("r-rlang" ,r-rlang)
- ("r-tidyr" ,r-tidyr)))
+ (list r-broom
+ r-cpp11
+ r-dplyr
+ r-generics
+ r-lattice
+ r-rcpp
+ r-rlang
+ r-tidyr))
(home-page "https://cran.r-project.org/web/packages/mice/")
(synopsis "Multivariate imputation by chained equations")
(description
@@ -5329,7 +5191,7 @@ functions, as well as a random generation function.")
(properties `((upstream-name . "Rsolnp")))
(build-system r-build-system)
(propagated-inputs
- `(("r-truncnorm" ,r-truncnorm)))
+ (list r-truncnorm))
(home-page "https://cran.r-project.org/web/packages/Rsolnp/")
(synopsis "General non-linear optimization")
(description "The Rsolnp package implements a general non-linear augmented
@@ -5352,9 +5214,7 @@ programming} (SQP) based solver).")
(properties `((upstream-name . "HardyWeinberg")))
(build-system r-build-system)
(propagated-inputs
- `(("r-mice" ,r-mice)
- ("r-rcpp" ,r-rcpp)
- ("r-rsolnp" ,r-rsolnp)))
+ (list r-mice r-rcpp r-rsolnp))
(home-page "https://cran.r-project.org/package=HardyWeinberg")
(synopsis "Statistical tests and graphics for Hardy-Weinberg equilibrium")
(description
@@ -5382,7 +5242,7 @@ acceptance regions, log-ratio plots and Q-Q plots.")
(base32
"03z8igsjqr32x407asxvkrbayvm6yhv9xyfs0n8fkmv8zk5a41r6"))))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "http://www.stats.gla.ac.uk/~adrian/sm/")
(synopsis "Smoothing methods for nonparametric regression and density estimation")
(description
@@ -5405,7 +5265,7 @@ and density estimation")
(properties `((upstream-name . "VennDiagram")))
(build-system r-build-system)
(propagated-inputs
- `(("r-futile-logger" ,r-futile-logger)))
+ (list r-futile-logger))
(home-page "https://cran.r-project.org/web/packages/VennDiagram/")
(synopsis "Generate High-Resolution Venn and Euler Plots")
(description
@@ -5428,10 +5288,9 @@ structure.")
"1dmdasp3jldc41233z6r08w3j76vyyp9m3jrj7n4ahk48yd5siq6"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-sm" ,r-sm)
- ("r-zoo" ,r-zoo)))
+ (list r-sm r-zoo))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "http://wsopuppenkiste.wiso.uni-goettingen.de/~dadler")
(synopsis "Violin plot")
(description
@@ -5456,7 +5315,7 @@ plot and a kernel density plot.")
(properties `((upstream-name . "RSofia")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)))
+ (list r-rcpp))
(home-page "https://cran.r-project.org/src/contrib/Archive/RSofia")
(synopsis "Port of sofia-ml to R")
(description "This package is a port of sofia-ml to R. Sofia-ml is a
@@ -5476,7 +5335,7 @@ training models for classification or ranking.")
(base32
"0b6a7mpyk9aw6axas7nz01gadczprwwfhii01fz31z26z555i06n"))))
(build-system r-build-system)
- (propagated-inputs `(("r-zoo" ,r-zoo)))
+ (propagated-inputs (list r-zoo))
(home-page "https://github.com/joshuaulrich/xts")
(synopsis "Extensible time series")
(description
@@ -5501,9 +5360,7 @@ simplifying cross-class interoperability.")
`((upstream-name . "PerformanceAnalytics")))
(build-system r-build-system)
(propagated-inputs
- `(("r-quadprog" ,r-quadprog)
- ("r-xts" ,r-xts)
- ("r-zoo" ,r-zoo)))
+ (list r-quadprog r-xts r-zoo))
(home-page "https://r-forge.r-project.org/projects/returnanalytics/")
(synopsis "Econometric tools for performance and risk analysis")
(description "This is a collection of econometric functions for
@@ -5529,8 +5386,7 @@ where possible.")
"1p3ccbaydlr52p8qmgmm2l6kryvq6jjjx7mqn2vv0gpjaxqhyy92"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-boot" ,r-boot)
- ("r-mass" ,r-mass)))
+ (list r-boot r-mass))
(home-page "https://cran.r-project.org/web/packages/laeken/")
(synopsis "Estimation of indicators on social exclusion and poverty")
(description "This package provides tools for the estimation of indicators
@@ -5551,9 +5407,7 @@ modeling for empirical income distributions.")
"13sn77qdcyll9lz7nab0bxzfvpgj8f5rl2cq5ylpz8pibynj1d55"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-colorspace" ,r-colorspace)
- ("r-lmtest" ,r-lmtest)
- ("r-mass" ,r-mass)))
+ (list r-colorspace r-lmtest r-mass))
(home-page "https://cran.r-project.org/web/packages/vcd/")
(synopsis "Visualizing categorical data")
(description "This package provides visualization techniques, data sets,
@@ -5576,20 +5430,20 @@ Analysis with R\" by Michael Friendly and David Meyer (2015).")
"0lhxb3ac4fafwik9q3cds46svzf0hyca8k54chw3dpk50c0zz1yx"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(inputs
- `(("zlib" ,zlib)))
+ (list zlib))
(propagated-inputs
- `(("r-ape" ,r-ape)
- ("r-dplyr" ,r-dplyr)
- ("r-magrittr" ,r-magrittr)
- ("r-memuse" ,r-memuse)
- ("r-pinfsc50" ,r-pinfsc50)
- ("r-rcpp" ,r-rcpp)
- ("r-stringr" ,r-stringr)
- ("r-tibble" ,r-tibble)
- ("r-vegan" ,r-vegan)
- ("r-viridislite" ,r-viridislite)))
+ (list r-ape
+ r-dplyr
+ r-magrittr
+ r-memuse
+ r-pinfsc50
+ r-rcpp
+ r-stringr
+ r-tibble
+ r-vegan
+ r-viridislite))
(home-page "https://github.com/knausb/vcfR")
(synopsis "Manipulate and visualize VCF data")
(description "This package facilitates easy manipulation of variant call
@@ -5634,7 +5488,7 @@ of Eigenmatrices} (JADE).")
(base32
"004gm4mzgdzdj807j3bwqsv5lizmnmz5jq514bdjshhkysnzjz6z"))))
(build-system r-build-system)
- (propagated-inputs `(("r-proxy" ,r-proxy)))
+ (propagated-inputs (list r-proxy))
(home-page "http://dtw.r-forge.r-project.org/")
(synopsis "Dynamic Time Warping Algorithms")
(description "This package provides a comprehensive implementation of
@@ -5658,7 +5512,7 @@ normalizations, minimum variance matching, and so on.")
"1xvcd97ikqsfdpk2fddy3k0z1ajqga7nv9bgac9c1wnjk1gqrpgh"))))
(properties `((upstream-name . "SDMTools")))
(build-system r-build-system)
- (propagated-inputs `(("r-r-utils" ,r-r-utils)))
+ (propagated-inputs (list r-r-utils))
(home-page "https://www.rforge.net/SDMTools/")
(synopsis "Species distribution modelling tools")
(description "This package provides a set of tools for post processing
@@ -5700,12 +5554,9 @@ plotting. a three dimensional point cloud.")
"0bmlqy1p6rac90af97ffpdi6php7dblx66l2hcm8ljidgyqzmspm"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-plyr" ,r-plyr)
- ("r-scales" ,r-scales)
- ("r-withr" ,r-withr)))
+ (list r-ggplot2 r-plyr r-scales r-withr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/clauswilke/ggridges")
(synopsis "Ridgeline plots in ggplot2")
(description
@@ -5727,8 +5578,7 @@ plots in @code{ggplot2}.")
"012md2m0jqfcccb933j423m3ck31v3p0pd41gjxpyg9082y7ixyj"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-ggridges" ,r-ggridges)))
+ (list r-ggplot2 r-ggridges))
(home-page "https://github.com/clauswilke/ggjoy")
(synopsis "Joyplots in ggplot2")
(description "Joyplots provide a convenient way of visualizing changes in
@@ -5749,7 +5599,7 @@ plots in @code{ggplot2}.")
"04ff3bgsahi736s8l6a26zlwwil8jw4shx7bb56ah1pp1f1n22n7"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-glue" ,r-glue)))
+ (list r-glue))
(home-page "https://github.com/r-lib/cli#readme")
(synopsis "Helpers for developing command line interfaces")
(description "This package provides a suite of tools designed to build
@@ -5790,7 +5640,7 @@ script.")
(base32
"1c9sg55zvf10h8198jdnpamm6f66lzw3c3jnmdp9ls6na0j0xbjd"))))
(build-system r-build-system)
- (propagated-inputs `(("r-crayon" ,r-crayon)))
+ (propagated-inputs (list r-crayon))
(home-page "https://github.com/r-lib/debugme#readme")
(synopsis "Debug R packages")
(description
@@ -5810,8 +5660,7 @@ constants, and control debugging of packages via environment variables.")
(base32 "0azw8sx6nv6pp8m8jrwq01b9na2swrnznn7dwrhn07268w82svzd"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ps" ,r-ps)
- ("r-r6" ,r-r6)))
+ (list r-ps r-r6))
(home-page "https://github.com/r-lib/processx3")
(synopsis "Execute and control system processes")
(description
@@ -5837,7 +5686,7 @@ timeout. It can also poll several processes at once.")
"0gdwxbj2gria7jhsswmfvc32r43sdd63z3lyy21gbvmfcakvb8j9"))))
(properties `((upstream-name . "TSP")))
(build-system r-build-system)
- (propagated-inputs `(("r-foreach" ,r-foreach)))
+ (propagated-inputs (list r-foreach))
(home-page "https://cran.r-project.org/web/packages/TSP/")
(synopsis "Traveling salesperson problem (TSP)")
(description "This package provides basic infrastructure and some
@@ -5857,7 +5706,7 @@ traveling salesman problem).")
(base32
"0d2d1ni1camixyi45lfy00f4pn3p063k7bsi8gj5scp6n15mdgb0"))))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/qap/")
(synopsis "Heuristics for the quadratic assignment problem (QAP)")
(description "This package implements heuristics for the @dfn{quadratic
@@ -5877,7 +5726,7 @@ available.")
(base32
"1cz0g0i972955hhaji30rx8448x7f3as7z1sww9i5h86ybgirilw"))))
(build-system r-build-system)
- (propagated-inputs `(("r-cluster" ,r-cluster)))
+ (propagated-inputs (list r-cluster))
(home-page "https://cran.r-project.org/web/packages/gclus/")
(synopsis "Clustering graphics")
(description "This package orders panels in scatterplot matrices and
@@ -5899,9 +5748,7 @@ of merit, ordering functions, and enhanced versions of @code{pairs} and
"0gq4h8cw51z95yvsnf38kj5l58wgljkm0dalmi8mn1sp06bxr0zi"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-callr" ,r-callr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-magrittr" ,r-magrittr)))
+ (list r-callr r-jsonlite r-magrittr))
(home-page "https://github.com/wch/webshot/")
(synopsis "Take screenshots of web pages")
(description
@@ -5924,14 +5771,14 @@ Markdown documents.")
"08c37n3xxc4n4vbkw38k3l3hdlmck8drqpl6z274vkgi2sqv8qyf"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-cluster" ,r-cluster)
- ("r-colorspace" ,r-colorspace)
- ("r-gclus" ,r-gclus)
- ("r-mass" ,r-mass)
- ("r-qap" ,r-qap)
- ("r-registry" ,r-registry)
- ("r-tsp" ,r-tsp)))
- (native-inputs `(("gfortran" ,gfortran)))
+ (list r-cluster
+ r-colorspace
+ r-gclus
+ r-mass
+ r-qap
+ r-registry
+ r-tsp))
+ (native-inputs (list gfortran))
(home-page "https://s2.smu.edu/IDA/seriation/")
(synopsis "Infrastructure for ordering objects using seriation")
(description
@@ -5978,8 +5825,7 @@ packages maintained by Yihui Xie.")
"1x6qg19z4qih9lk3mvnmx0vailm1khp5lylw4hlwz6rssj3yw6m7"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)
- ("r-rmarkdown" ,r-rmarkdown))) ; for vignettes
+ (list r-knitr r-rmarkdown)) ; for vignettes
(home-page "https://github.com/patperry/r-utf8")
(synopsis "Unicode text processing")
(description
@@ -6022,11 +5868,9 @@ to variables on the left-hand side of the assignment.")
"1c8v5lmap6iq4jpi7p3w05hsv2dq7rjg057pvnfyc5d1xmsqnkkz"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ellipsis" ,r-ellipsis)
- ("r-glue" ,r-glue)
- ("r-rlang" ,r-rlang)))
+ (list r-ellipsis r-glue r-rlang))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/r-lib/vctrs")
(synopsis "Vector helpers")
(description
@@ -6060,16 +5904,16 @@ to variables on the left-hand side of the assignment.")
"17m13rzgwdddwa0n3gpmax6wmfaphbg71l13ffhw5vnxf6i94fh3"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-cli" ,r-cli)
- ("r-crayon" ,r-crayon)
- ("r-ellipsis" ,r-ellipsis)
- ("r-fansi" ,r-fansi)
- ("r-lifecycle" ,r-lifecycle)
- ("r-rlang" ,r-rlang)
- ("r-utf8" ,r-utf8)
- ("r-vctrs" ,r-vctrs)))
+ (list r-cli
+ r-crayon
+ r-ellipsis
+ r-fansi
+ r-lifecycle
+ r-rlang
+ r-utf8
+ r-vctrs))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/r-lib/pillar")
(synopsis "Coloured formatting for columns")
(description
@@ -6129,7 +5973,7 @@ packages that work with genomic data.")
"04ng34kfds2isz4j9ch1xlii0dfclqay9fsc6wvr6sfifzv9fqyk"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-xfun" ,r-xfun)))
+ (list r-xfun))
(home-page "https://github.com/yihui/tinytex")
(synopsis "Helper functions for TeX Live and compiling LaTeX documents")
(description
@@ -6188,9 +6032,7 @@ features:
"19q563v5xfkbmr0ws9nhqx4wrxkf9jsck51rqc8mm2gq2h03lg7w"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-magrittr" ,r-magrittr)
- ("r-statnet-common" ,r-statnet-common)
- ("r-tibble" ,r-tibble)))
+ (list r-magrittr r-statnet-common r-tibble))
(home-page "https://statnet.org/")
(synopsis "Classes for relational data")
(description
@@ -6212,7 +6054,7 @@ supports arbitrary vertex/edge/graph attributes.")
"1nf1yg14cgxrs4np1yghpzw1nczaslfv3rvf3918wrlzg0vp6l7q"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/hofnerb/stabs")
(synopsis "Stability selection with error control")
(description
@@ -6261,7 +6103,7 @@ vectors.")
`((upstream-name . "statnet.common")))
(build-system r-build-system)
(propagated-inputs
- `(("r-coda" ,r-coda)))
+ (list r-coda))
(home-page "https://statnet.org")
(synopsis "R scripts and utilities used by the Statnet software")
(description "This package provides non-statistical utilities used by the
@@ -6281,9 +6123,7 @@ software developed by the Statnet Project.")
"0ivybdcrymlsfv6pg6p5bv70qdvgxf2vgp0kf4r0pf2fcvav1mcp"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-plyr" ,r-plyr)
- ("r-rmarkdown" ,r-rmarkdown)))
+ (list r-ggplot2 r-plyr r-rmarkdown))
(home-page "https://cran.r-project.org/web/packages/statcheck/")
(synopsis "Extract statistics from articles and recompute p-values")
(description "This package can automatically extract statistical
@@ -6305,8 +6145,7 @@ detect possible inconsistencies.")
"0ai0v4538d30m4wks5s3lch1yfmx1ml0nnrz7ihs097lv586a09s"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-network" ,r-network)
- ("r-statnet-common" ,r-statnet-common)))
+ (list r-network r-statnet-common))
(home-page "https://statnet.org")
(synopsis "Tools for social network analysis")
(description
@@ -6330,9 +6169,7 @@ generation, and 2D/3D network visualization.")
(properties `((upstream-name . "TFisher")))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-sn" ,r-sn)))
+ (list r-matrix r-mvtnorm r-sn))
(home-page "https://cran.r-project.org/web/packages/TFisher/")
(synopsis "Optimal thresholding Fisher's p-value combination method")
(description
@@ -6359,9 +6196,7 @@ of these tests are also included.")
(properties `((upstream-name . "TTR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-curl" ,r-curl)
- ("r-xts" ,r-xts)
- ("r-zoo" ,r-zoo)))
+ (list r-curl r-xts r-zoo))
(home-page "https://github.com/joshuaulrich/TTR")
(synopsis "Technical trading rules")
(description
@@ -6381,7 +6216,7 @@ rules with R.")
(base32
"1dn3yl1p03n0iynd1vsdkrr0fhmvgrmfkv37y7n371765h83lz1x"))))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/leaps/")
(synopsis "Regression subset selection")
(description
@@ -6423,8 +6258,7 @@ provides some missing S-PLUS functionality in R.")
"16a7rbvlym3bnfm93ikr5kl0l86ppk0s41fva6idvcx765g3fqkk"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)
- ("r-splus2r" ,r-splus2r)))
+ (list r-mass r-splus2r))
(home-page "https://cran.r-project.org/web/packages/ifultools/")
(synopsis "Insightful research tools")
(description "This package provides C code used by the wmtsa, fractal, and
@@ -6444,8 +6278,7 @@ sapa R packages.")
"0kj681rd4c2lvqr926lb6f4qwp281x5274dg6vbk8pf5y7s0qlpc"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ifultools" ,r-ifultools)
- ("r-splus2r" ,r-splus2r)))
+ (list r-ifultools r-splus2r))
(home-page "https://cran.r-project.org/web/packages/sapa/")
(synopsis "Spectral analysis for physical applications")
(description "This package provides software for the book Spectral
@@ -6486,10 +6319,7 @@ Fisher's method), and Sidak correction.")
"0dbcrncv06iqcbkky95dd7l32xq0hhbnkb0kj8wwzym1jf748h5a"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-curl" ,r-curl)
- ("r-ttr" ,r-ttr)
- ("r-xts" ,r-xts)
- ("r-zoo" ,r-zoo)))
+ (list r-curl r-ttr r-xts r-zoo))
(home-page "https://cran.r-project.org/web/packages/quantmod/")
(synopsis "Quantitative financial modelling framework")
(description "This package provides a quantitative financial modelling
@@ -6510,11 +6340,9 @@ financial trading strategies.")
"1fhldj95d16cwygw8xg0kvr4xk569mpzprdvahlsf4hzykc2dgs5"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-quadprog" ,r-quadprog)
- ("r-quantmod" ,r-quantmod)
- ("r-zoo" ,r-zoo)))
+ (list r-quadprog r-quantmod r-zoo))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/tseries/")
(synopsis "Time series analysis and computational finance")
(description
@@ -6535,9 +6363,7 @@ computational finance.")
"1q436krz5p1f4a7a7sya6a9rh9x9mi8zzcgq66gbk9w9w4hcqcj6"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ifultools" ,r-ifultools)
- ("r-mass" ,r-mass)
- ("r-splus2r" ,r-splus2r)))
+ (list r-ifultools r-mass r-splus2r))
(home-page "https://cran.r-project.org/web/packages/wmtsa/")
(synopsis "Wavelet methods for time series analysis")
(description
@@ -6560,10 +6386,7 @@ University Press, 2000.")
(properties `((upstream-name . "TSA")))
(build-system r-build-system)
(propagated-inputs
- `(("r-leaps" ,r-leaps)
- ("r-locfit" ,r-locfit)
- ("r-mgcv" ,r-mgcv)
- ("r-tseries" ,r-tseries)))
+ (list r-leaps r-locfit r-mgcv r-tseries))
(home-page "https://homepage.divms.uiowa.edu/~kchan/TSA.htm")
(synopsis "Time series analysis")
(description
@@ -6586,7 +6409,7 @@ Cryer and Kung-Sik Chan.")
(properties `((upstream-name . "extraDistr")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)))
+ (list r-rcpp))
(home-page "https://github.com/twolodzko/extraDistr")
(synopsis "Additional univariate and multivariate distributions")
(description
@@ -6608,12 +6431,12 @@ multivariate distributions.")
"18lr9z0gslvfc3z8vyj3krqj3bfhg60zv1fzinrwwkc4cpk1w7mp"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ifultools" ,r-ifultools)
- ("r-mass" ,r-mass)
- ("r-sapa" ,r-sapa)
- ("r-scatterplot3d" ,r-scatterplot3d)
- ("r-splus2r" ,r-splus2r)
- ("r-wmtsa" ,r-wmtsa)))
+ (list r-ifultools
+ r-mass
+ r-sapa
+ r-scatterplot3d
+ r-splus2r
+ r-wmtsa))
(home-page "https://cran.r-project.org/web/packages/fractal/")
(synopsis "Fractal time series modeling and analysis")
(description
@@ -6633,8 +6456,8 @@ chaotic time series analysis.")
(base32
"1akaqwf3fvvvx4sgfn641fd4sj51s0701pvfl6s5hnz2k0iwh732"))))
(build-system r-build-system)
- (propagated-inputs `(("r-nlme" ,r-nlme)))
- (native-inputs `(("gfortran" ,gfortran)))
+ (propagated-inputs (list r-nlme))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/urca/")
(synopsis "Unit root and cointegration tests for time series data")
(description
@@ -6655,9 +6478,9 @@ applied econometric analysis.")
"0kk9lw3s66h0sayza3in8rdj7bmgqn4v5lfckhslarpvj2fxsnv0"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)))
+ (list r-rcpp))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/bnaras/cubature")
(synopsis "Adaptive multivariate integration over hypercubes")
(description
@@ -6682,9 +6505,9 @@ interface.")
"1mr5g5gaxiqj6x83ngcbwwh57vhrhcz0x9dh0rmvs9y2ivk29ccs"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-extradistr" ,r-extradistr)))
+ (list r-extradistr))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/trend/")
(synopsis "Non-parametric trend tests and change-point detection")
(description
@@ -6712,8 +6535,8 @@ sample Robust Rank-Order Distributional Test.")
(base32
"1p5dapwv8ycxaysgi6imnby04i4kh1c5a2czqa4wygz0s8pr2y9c"))))
(build-system r-build-system)
- (propagated-inputs `(("r-matrix" ,r-matrix)))
- (native-inputs `(("gfortran" ,gfortran)))
+ (propagated-inputs (list r-matrix))
+ (native-inputs (list gfortran))
(home-page "https://r-forge.r-project.org/projects/expm/")
(synopsis "Tools for matrix exponentials and related quantities")
(description
@@ -6734,8 +6557,7 @@ exponential, logarithm, square root, and related quantities.")
"16w9v7d1ckavqmr86l34frr37pkvdn0iqnb17ssb8xaggns5lgqx"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-expm" ,r-expm)
- ("r-matrix" ,r-matrix)))
+ (list r-expm r-matrix))
(home-page "https://cran.r-project.org/web/packages/complexplus/")
(synopsis "Functions of complex or real variables")
(description
@@ -6778,10 +6600,7 @@ creation and manipulation of WAVE audio files.")
"1a9kzn37cddwfdki5zjmzanxp75pccdjnsvqfrh84hhcsy51pcx3"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-boot" ,r-boot)
- ("r-cubature" ,r-cubature)
- ("r-quadprog" ,r-quadprog)
- ("r-quantreg" ,r-quantreg)))
+ (list r-boot r-cubature r-quadprog r-quantreg))
(home-page "https://github.com/JeffreyRacine/R-Package-np")
(synopsis "Non-parametric kernel smoothing methods for mixed data types")
(description "This package provides non-parametric (and semi-parametric)
@@ -6803,11 +6622,7 @@ ordered factor data types.")
"0ayp6x34hkzgris4j3zbbs0r23n81bhww3wgfyy630ri4sk6brrn"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-complexplus" ,r-complexplus)
- ("r-expm" ,r-expm)
- ("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-phontools" ,r-phontools)))
+ (list r-complexplus r-expm r-mass r-matrix r-phontools))
(home-page "https://cran.r-project.org/web/packages/powerplus/")
(synopsis "Exponentiation operations")
(description
@@ -6829,9 +6644,7 @@ exponentiation.")
(properties `((upstream-name . "egg")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-gtable" ,r-gtable)))
+ (list r-ggplot2 r-gridextra r-gtable))
(home-page "https://cran.r-project.org/web/packages/egg")
(synopsis "Extensions for ggplot2")
(description
@@ -6855,9 +6668,9 @@ functions to enforce symmetric scales or add tags to facetted plots.")
"0sfvizmmwfk1bjhn6zfx5a4qqfgj1ldg8x90b65crqibgfa36k2r"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-fastcluster" ,r-fastcluster)))
+ (list r-fastcluster))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/heatmap3/")
(synopsis "Improved heatmap package")
(description
@@ -6879,22 +6692,22 @@ powerful and convenient features.")
"1w8yyzb68laxd4zxycvgmpqj5wnyidjgv1vbzbxndp9p92f2cp8a"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertthat" ,r-assertthat)
- ("r-colorspace" ,r-colorspace)
- ("r-dendextend" ,r-dendextend)
- ("r-egg" ,r-egg)
- ("r-ggplot2" ,r-ggplot2)
- ("r-htmlwidgets" ,r-htmlwidgets)
- ("r-magrittr" ,r-magrittr)
- ("r-plotly" ,r-plotly)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-reshape2" ,r-reshape2)
- ("r-scales" ,r-scales)
- ("r-seriation" ,r-seriation)
- ("r-viridis" ,r-viridis)
- ("r-webshot" ,r-webshot)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-assertthat
+ r-colorspace
+ r-dendextend
+ r-egg
+ r-ggplot2
+ r-htmlwidgets
+ r-magrittr
+ r-plotly
+ r-rcolorbrewer
+ r-reshape2
+ r-scales
+ r-seriation
+ r-viridis
+ r-webshot))
+ (native-inputs
+ (list r-knitr))
(home-page "https://cran.r-project.org/package=heatmaply")
(synopsis "Interactive cluster heat maps using plotly")
(description
@@ -6922,12 +6735,11 @@ dendrograms.")
"14p7i1sj24ky87kd7qr3n9fc9l64s0bp0rwbyl6i2x69xn75gpsx"))))
(build-system r-build-system)
(inputs
- `(("zlib" ,zlib)
- ("hdf5" ,hdf5)))
+ (list zlib hdf5))
(native-inputs
- `(("which" ,which)))
+ (list which))
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)))
+ (list r-rcpp))
(home-page "https://github.com/mannau/h5")
(synopsis "Interface to the HDF5 Library")
(description
@@ -6952,9 +6764,7 @@ fit into memory.")
"07yc819hkabpzzh0g0cbqza6bcfy67b2marrzz1lj97f9iba78ja"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-httr" ,r-httr)
- ("r-r-methodss3" ,r-r-methodss3)
- ("r-r-oo" ,r-r-oo)))
+ (list r-httr r-r-methodss3 r-r-oo))
(home-page "https://github.com/cBioPortal/cgdsr")
(synopsis "R-based API for accessing the MSKCC Cancer Genomics Data Server")
(description
@@ -6976,7 +6786,7 @@ Memorial-Sloan-Kettering Cancer Center (MSKCC).")
"018s0x224gqnv4cjfh0fwliyfg6ma9vslmwybrlizfsmqcc5wp37"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/smbache/import")
(synopsis "Import mechanism for R")
(description
@@ -7003,8 +6813,7 @@ files.")
(properties `((upstream-name . "shinyAce")))
(build-system r-build-system)
(propagated-inputs
- `(("r-shiny" ,r-shiny)
- ("r-jsonlite" ,r-jsonlite)))
+ (list r-shiny r-jsonlite))
(home-page "https://cran.r-project.org/web/packages/shinyAce/")
(synopsis "Ace editor bindings for Shiny")
(description
@@ -7026,7 +6835,7 @@ environment within Shiny.")
(properties `((upstream-name . "randomizr")))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://declaredesign.org/r/randomizr/")
(synopsis "Tools for common forms of random assignment and sampling")
(description
@@ -7047,7 +6856,7 @@ experimental designs and random samples for common sampling designs.")
"0n1c2b68vza1dh7sk38v6biiwm72c4jpl79kpdg1bsb0hq9qy18x"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-backports" ,r-backports)))
+ (list r-backports))
(home-page "https://github.com/mllg/base64url")
(synopsis "Fast and URL-safe base64 encoder and decoder")
(description
@@ -7081,38 +6890,38 @@ systems.")
(properties `((upstream-name . "radiant.data")))
(build-system r-build-system)
(propagated-inputs
- `(("r-base64enc" ,r-base64enc)
- ("r-broom" ,r-broom)
- ("r-car" ,r-car)
- ("r-curl" ,r-curl)
- ("r-dplyr" ,r-dplyr)
- ("r-dt" ,r-dt)
- ("r-glue" ,r-glue)
- ("r-ggplot2" ,r-ggplot2)
- ("r-import" ,r-import)
- ("r-jsonlite" ,r-jsonlite)
- ("r-knitr" ,r-knitr)
- ("r-lubridate" ,r-lubridate)
- ("r-magrittr" ,r-magrittr)
- ("r-markdown" ,r-markdown)
- ("r-mass" ,r-mass)
- ("r-patchwork" ,r-patchwork)
- ("r-plotly" ,r-plotly)
- ("r-psych" ,r-psych)
- ("r-randomizr" ,r-randomizr)
- ("r-readr" ,r-readr)
- ("r-readxl" ,r-readxl)
- ("r-rlang" ,r-rlang)
- ("r-rmarkdown" ,r-rmarkdown)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-scales" ,r-scales)
- ("r-shiny" ,r-shiny)
- ("r-shinyfiles" ,r-shinyfiles)
- ("r-shinyace" ,r-shinyace)
- ("r-stringi" ,r-stringi)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)
- ("r-writexl" ,r-writexl)))
+ (list r-base64enc
+ r-broom
+ r-car
+ r-curl
+ r-dplyr
+ r-dt
+ r-glue
+ r-ggplot2
+ r-import
+ r-jsonlite
+ r-knitr
+ r-lubridate
+ r-magrittr
+ r-markdown
+ r-mass
+ r-patchwork
+ r-plotly
+ r-psych
+ r-randomizr
+ r-readr
+ r-readxl
+ r-rlang
+ r-rmarkdown
+ r-rstudioapi
+ r-scales
+ r-shiny
+ r-shinyfiles
+ r-shinyace
+ r-stringi
+ r-tibble
+ r-tidyr
+ r-writexl))
(home-page "https://github.com/radiant-rstats/radiant.data")
(synopsis "Data menu for Radiant: business analytics using R and Shiny")
(description
@@ -7156,7 +6965,7 @@ and within plot factors interact.")
(base32 "039frwrsxq1lb97s7vf2vbyyadimkigs628ymym06fxka53drdkp"))))
(properties `((upstream-name . "alluvial")))
(build-system r-build-system)
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/mbojan/alluvial")
(synopsis "Create parallel sets plots (Alluvial Diagrams)")
(description
@@ -7176,8 +6985,8 @@ plots) for multivariate and time series-like data.")
(base32
"0qaf39vfmhn3d0bdjqd805ayfkaj48dkmf5dqd47bpk7dp21b837"))))
(build-system r-build-system)
- (propagated-inputs `(("r-mass" ,r-mass)))
- (native-inputs `(("gfortran" ,gfortran)))
+ (propagated-inputs (list r-mass))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/signal/")
(synopsis "Signal processing")
(description
@@ -7199,7 +7008,7 @@ It also includes interpolation functions.")
(base32
"00j6b8b6xsx6v370h220x233rpk6asca78165y3d48jpwvwisdc9"))))
(build-system r-build-system)
- (propagated-inputs `(("r-proto" ,r-proto)))
+ (propagated-inputs (list r-proto))
(home-page "https://code.google.com/archive/p/gsubfn/")
(synopsis "Utilities for strings and function arguments.")
(description
@@ -7226,11 +7035,7 @@ functions.")
"0q12vsb53p2wchgp8wfz5bk08wfnm0jxjrakclj4jyy6x3a7ksff"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-chron" ,r-chron)
- ("r-dbi" ,r-dbi)
- ("r-gsubfn" ,r-gsubfn)
- ("r-proto" ,r-proto)
- ("r-rsqlite" ,r-rsqlite)))
+ (list r-chron r-dbi r-gsubfn r-proto r-rsqlite))
(home-page "https://github.com/ggrothendieck/sqldf")
(synopsis "Manipulate R data frames using SQL")
(description
@@ -7304,21 +7109,21 @@ specific S3-method.")
(properties `((upstream-name . "VIM")))
(build-system r-build-system)
(propagated-inputs
- `(("r-car" ,r-car)
- ("r-colorspace" ,r-colorspace)
- ("r-data-table" ,r-data-table)
- ("r-e1071" ,r-e1071)
- ("r-laeken" ,r-laeken)
- ("r-magrittr" ,r-magrittr)
- ("r-mass" ,r-mass)
- ("r-nnet" ,r-nnet)
- ("r-ranger" ,r-ranger)
- ("r-rcpp" ,r-rcpp)
- ("r-robustbase" ,r-robustbase)
- ("r-sp" ,r-sp)
- ("r-vcd" ,r-vcd)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-car
+ r-colorspace
+ r-data-table
+ r-e1071
+ r-laeken
+ r-magrittr
+ r-mass
+ r-nnet
+ r-ranger
+ r-rcpp
+ r-robustbase
+ r-sp
+ r-vcd))
+ (native-inputs
+ (list r-knitr))
(home-page "https://github.com/alexkowa/VIM")
(synopsis "Visualization and imputation of missing values")
(description
@@ -7368,7 +7173,7 @@ regression and information measures are implemented.")
"0nqr1bvlr5bnasqg74zmknjjl4x28kla9h5cxpga3kq5z215pdci"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ttr" ,r-ttr)))
+ (list r-ttr))
(home-page "https://cran.r-project.org/web/packages/smoother")
(synopsis "Functions relating to the smoothing of numerical data")
(description
@@ -7391,9 +7196,9 @@ are included.")
"04ap1dsa7fx03l73jhv1ql3adaaaz2100qawdplxa9xmrllgcgbj"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcolorbrewer" ,r-rcolorbrewer)))
+ (list r-rcolorbrewer))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://logfc.wordpress.com")
(synopsis "Sankey or ribbon plots")
(description
@@ -7417,7 +7222,7 @@ plots for R.")
"16fqv9k7yxdgybwzafjkyqm16qpgqz13lcjpi6a1nc8xbzlzh0gb"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-zoo" ,r-zoo)))
+ (list r-zoo))
(home-page "https://cran.r-project.org/web/packages/dyn")
(synopsis "Time series regression")
(description
@@ -7444,7 +7249,7 @@ contain lags, diffs and missing values.")
"0fyhl69z2lznymvpzxra9qvcg85ggzkfjy68c6mzdmf1ja44d2k5"))))
(build-system r-build-system)
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/catdap/")
(synopsis "Tools for categorical data analysis")
(description
@@ -7467,8 +7272,7 @@ evaluated by the @dfn{Akaike Information Criterion} (AIC).")
"0zzwr1mg92ha5l6razdb04da8ik3z3k74rm0rah44l1j2a6d30sk"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-generics" ,r-generics)
- ("r-matrix" ,r-matrix)))
+ (list r-generics r-matrix))
(home-page "https://github.com/mhahsler/arules")
(synopsis "Mining association rules and frequent itemsets")
(description
@@ -7491,7 +7295,7 @@ and Eclat.")
"05l6f1n3dsm383w7jfg3j38klvmzzfvc7qi9zr5ij13rljj8s1vb"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rematch2" ,r-rematch2)))
+ (list r-rematch2))
(home-page "https://github.com/gaborcsardi/parsedate")
(synopsis
"Recognize and parse dates in various formats")
@@ -7537,11 +7341,7 @@ goodness-of-fit.")
"0ngzaaz2y2s03fhngvwipmy4kq38xrmyddaz6a6l858rxvadrlhb"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-abc-data" ,r-abc-data)
- ("r-locfit" ,r-locfit)
- ("r-mass" ,r-mass)
- ("r-nnet" ,r-nnet)
- ("r-quantreg" ,r-quantreg)))
+ (list r-abc-data r-locfit r-mass r-nnet r-quantreg))
(home-page "https://cran.r-project.org/web/packages/abc/")
(synopsis "Tools for Approximate Bayesian Computation (ABC)")
(description
@@ -7585,11 +7385,9 @@ additional external tools on any platform.")
"0vn8ifxb7ccip6b1ijf5lpa6c0n5y5ll8fbabybsb8nfc0y1nmxg"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-stringi" ,r-stringi)
- ("r-zip" ,r-zip)))
+ (list r-rcpp r-stringi r-zip))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/awalker89/openxlsx")
(synopsis "Read, write and edit XLSX files")
(description
@@ -7613,15 +7411,15 @@ dependency on Java.")
"04jlrhyl0791yxwcpp1s8p1hhkljnijlc5iaxpk56h41w63k39lz"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-curl" ,r-curl)
- ("r-data-table" ,r-data-table)
- ("r-foreign" ,r-foreign)
- ("r-haven" ,r-haven)
- ("r-openxlsx" ,r-openxlsx)
- ("r-readxl" ,r-readxl)
- ("r-tibble" ,r-tibble)))
+ (list r-curl
+ r-data-table
+ r-foreign
+ r-haven
+ r-openxlsx
+ r-readxl
+ r-tibble))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/leeper/rio")
(synopsis "Swiss-army knife for data I/O")
(description
@@ -7649,9 +7447,7 @@ simple method for converting between file types.")
"0fa4a43zax8gn3jdp4ngqav61x4g6l33bg9wzqbngkbjhipck59r"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-foreign" ,r-foreign)
- ("r-lattice" ,r-lattice)
- ("r-sp" ,r-sp)))
+ (list r-foreign r-lattice r-sp))
(home-page "https://r-forge.r-project.org/projects/maptools/")
(synopsis "Tools for reading and handling spatial objects")
(description
@@ -7677,10 +7473,9 @@ exchanging spatial objects with other R packages.")
"0acqg29hcm2iq1418b54np7zb5pnr3xzrwc3ijv2pz9wra10ix88"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-rlang" ,r-rlang)))
+ (list r-rcpp r-rlang))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/r-lib/later")
(synopsis "Utilities for delaying function execution")
(description
@@ -7701,13 +7496,9 @@ time after the current time, after the R execution stack has emptied.")
"1dy4cbqw17awh4q8m7cy3anaj0n9iynabfzflb1g94cyj0bq4fld"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-later" ,r-later)
- ("r-magrittr" ,r-magrittr)
- ("r-r6" ,r-r6)
- ("r-rcpp" ,r-rcpp)
- ("r-rlang" ,r-rlang)))
+ (list r-later r-magrittr r-r6 r-rcpp r-rlang))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://rstudio.github.io/promises")
(synopsis "Abstractions for promise-based asynchronous programming")
(description
@@ -7732,9 +7523,7 @@ promises, but with a syntax that is idiomatic R.")
(properties `((upstream-name . "doSNOW")))
(build-system r-build-system)
(propagated-inputs
- `(("r-foreach" ,r-foreach)
- ("r-iterators" ,r-iterators)
- ("r-snow" ,r-snow)))
+ (list r-foreach r-iterators r-snow))
(home-page "https://cran.r-project.org/web/packages/doSNOW")
(synopsis "Foreach parallel adaptor for the snow package")
(description
@@ -7755,7 +7544,7 @@ using the @code{snow} package.")
"0vwclzxww8mw9nnpyj29bn71mrr8jjg7ka03979h9rbzw6d9bjrr"))))
(properties `((upstream-name . "fst")))
(build-system r-build-system)
- (propagated-inputs `(("r-rcpp" ,r-rcpp)))
+ (propagated-inputs (list r-rcpp))
(home-page "http://www.fstpackage.org")
(synopsis "Fast serialization of data frames")
(description
@@ -7778,7 +7567,7 @@ compression with the LZ4 and ZSTD compressors.")
(base32 "13941rlw1jsdjsndp1plzj1cq5aqravizkrqn6l25r9im7rnsi2w"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-snow" ,r-snow)))
+ (list r-snow))
(home-page "https://cran.r-project.org/web/packages/snowfall/")
(synopsis "Easier cluster computing")
(description "This package is a usability wrapper around snow for easier
@@ -7836,9 +7625,7 @@ it.")
(string-append "--outfile=" target)))
sources targets)))))))))
(propagated-inputs
- `(("r-igraph" ,r-igraph)
- ("r-servr" ,r-servr)
- ("r-xml" ,r-xml)))
+ (list r-igraph r-servr r-xml))
(native-inputs
`(("r-knitr" ,r-knitr)
("esbuild" ,esbuild)
@@ -7891,10 +7678,9 @@ JavaScript library) and interact with the igraph package.")
(properties `((upstream-name . "data.tree")))
(build-system r-build-system)
(propagated-inputs
- `(("r-r6" ,r-r6)
- ("r-stringi" ,r-stringi)))
+ (list r-r6 r-stringi))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/gluc/data.tree")
(synopsis "General purpose hierarchical data structure")
(description
@@ -7918,18 +7704,18 @@ finance, conversion from and to JSON, and many other applications.")
(properties `((upstream-name . "dtplyr")))
(build-system r-build-system)
(propagated-inputs
- `(("r-crayon" ,r-crayon)
- ("r-data-table" ,r-data-table)
- ("r-dplyr" ,r-dplyr)
- ("r-ellipsis" ,r-ellipsis)
- ("r-glue" ,r-glue)
- ("r-lifecycle" ,r-lifecycle)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-tidyselect" ,r-tidyselect)
- ("r-vctrs" ,r-vctrs)))
+ (list r-crayon
+ r-data-table
+ r-dplyr
+ r-ellipsis
+ r-glue
+ r-lifecycle
+ r-rlang
+ r-tibble
+ r-tidyselect
+ r-vctrs))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/tidyverse/dtplyr")
(synopsis "Data Table back-end for dplyr")
(description
@@ -7971,8 +7757,7 @@ automatically translated to the equivalent, but usually much faster,
(invoke "esbuild" source "--minify"
(string-append "--outfile=" target)))))))))
(propagated-inputs
- `(("r-data-tree" ,r-data-tree)
- ("r-htmlwidgets" ,r-htmlwidgets)))
+ (list r-data-tree r-htmlwidgets))
(native-inputs
`(("esbuild" ,esbuild)
("d3.v4.js"
@@ -8025,15 +7810,15 @@ Python's @url{https://github.com/ActiveState/appdirs,Appdirs} to R.")
(properties `((upstream-name . "rasterVis")))
(build-system r-build-system)
(propagated-inputs
- `(("r-hexbin" ,r-hexbin)
- ("r-lattice" ,r-lattice)
- ("r-latticeextra" ,r-latticeextra)
- ("r-raster" ,r-raster)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-sp" ,r-sp)
- ("r-terra" ,r-terra)
- ("r-viridislite" ,r-viridislite)
- ("r-zoo" ,r-zoo)))
+ (list r-hexbin
+ r-lattice
+ r-latticeextra
+ r-raster
+ r-rcolorbrewer
+ r-sp
+ r-terra
+ r-viridislite
+ r-zoo))
(home-page "https://oscarperpinan.github.io/rastervis/")
(synopsis "Visualization methods for raster data")
(description
@@ -8057,11 +7842,9 @@ provides methods to display spatiotemporal rasters, and vector fields.")
(properties `((upstream-name . "rentrez")))
(build-system r-build-system)
(propagated-inputs
- `(("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-xml" ,r-xml)))
+ (list r-httr r-jsonlite r-xml))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://docs.ropensci.org/rentrez/")
(synopsis "Entrez in R")
(description
@@ -8084,7 +7867,7 @@ those searches and pull data into their R sessions.")
(properties `((upstream-name . "renv")))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://rstudio.github.io/renv")
(synopsis "Project environments")
(description
@@ -8108,20 +7891,20 @@ reproducible.")
"08xwmms6x58y3dsfbl9c6d03145hb4ij97nqr1cc9dxxilmr6x31"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-checkmate" ,r-checkmate)
- ("r-ellipsis" ,r-ellipsis)
- ("r-evaluate" ,r-evaluate)
- ("r-htmltools" ,r-htmltools)
- ("r-htmlwidgets" ,r-htmlwidgets)
- ("r-jsonlite" ,r-jsonlite)
- ("r-knitr" ,r-knitr)
- ("r-markdown" ,r-markdown)
- ("r-rappdirs" ,r-rappdirs)
- ("r-renv" ,r-renv)
- ("r-rmarkdown" ,r-rmarkdown)
- ("r-rprojroot" ,r-rprojroot)
- ("r-shiny" ,r-shiny)
- ("r-withr" ,r-withr)))
+ (list r-checkmate
+ r-ellipsis
+ r-evaluate
+ r-htmltools
+ r-htmlwidgets
+ r-jsonlite
+ r-knitr
+ r-markdown
+ r-rappdirs
+ r-renv
+ r-rmarkdown
+ r-rprojroot
+ r-shiny
+ r-withr))
(home-page "https://rstudio.github.io/learnr/")
(synopsis "Interactive tutorials for R")
(description
@@ -8143,18 +7926,18 @@ quizzes to create self-paced tutorials for learning about R and R packages.")
"0js3c8lwj3knccb55nq03cbjlf4w390p9aid2mi5x80l3ayd9in1"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-car" ,r-car)
- ("r-cluster" ,r-cluster)
- ("r-fractal" ,r-fractal)
- ("r-lmtest" ,r-lmtest)
- ("r-mass" ,r-mass)
- ("r-np" ,r-np)
- ("r-powerplus" ,r-powerplus)
- ("r-robust" ,r-robust)
- ("r-trend" ,r-trend)
- ("r-tsa" ,r-tsa)
- ("r-urca" ,r-urca)
- ("r-vim" ,r-vim)))
+ (list r-car
+ r-cluster
+ r-fractal
+ r-lmtest
+ r-mass
+ r-np
+ r-powerplus
+ r-robust
+ r-trend
+ r-tsa
+ r-urca
+ r-vim))
(home-page "https://cran.r-project.org/web/packages/analytics/")
(synopsis "Collection of data analysis tools")
(description
@@ -8177,8 +7960,8 @@ obtain a better initial configuration in non-metric MDS.")
(base32 "0srlr8h8qmr0wrmp7gs4g2ry5dni2hx8n947bik3s3a26f091v88"))))
(properties `((upstream-name . "here")))
(build-system r-build-system)
- (propagated-inputs `(("r-rprojroot" ,r-rprojroot)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (propagated-inputs (list r-rprojroot))
+ (native-inputs (list r-knitr))
(home-page "https://here.r-lib.org/")
(synopsis "Simpler way to find files")
(description
@@ -8199,17 +7982,17 @@ always locate the files relative to your project root.")
(base32
"0v7m2pv94lfqiw8rhz3c9g66vvz4qvih4vd29rhfk2phmcwpnvmh"))))
(build-system r-build-system)
- (inputs `(("python" ,python)))
+ (inputs (list python))
(propagated-inputs
- `(("r-here" ,r-here)
- ("r-jsonlite" ,r-jsonlite)
- ("r-matrix" ,r-matrix)
- ("r-png" ,r-png)
- ("r-rappdirs" ,r-rappdirs)
- ("r-rcpp" ,r-rcpp)
- ("r-withr" ,r-withr)))
+ (list r-here
+ r-jsonlite
+ r-matrix
+ r-png
+ r-rappdirs
+ r-rcpp
+ r-withr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/rstudio/reticulate")
(synopsis "R interface to Python")
(description
@@ -8231,7 +8014,7 @@ Python to R they are converted back to R types.")
(base32
"0vdwx6808r73pk15263f33bkqbfmb08d8jkmr4d7h4ml414ikbbv"))))
(build-system r-build-system)
- (propagated-inputs `(("r-stringr" ,r-stringr)))
+ (propagated-inputs (list r-stringr))
(home-page "https://github.com/romainfrancois/bibtex")
(synopsis "Bibtex parser")
(description "This package provides a utility for R to parse a bibtex
@@ -8250,7 +8033,7 @@ file.")
(base32
"13q6kcpxrqxqbji889fx63p0nsi08lk5yymkchig75r5k1d18ky1"))))
(build-system r-build-system)
- (propagated-inputs `(("r-ggplot2" ,r-ggplot2)))
+ (propagated-inputs (list r-ggplot2))
(home-page "https://github.com/omarwagih/ggseqlogo")
(synopsis "ggplot2 extension for drawing genetic sequence logos")
(description
@@ -8275,8 +8058,7 @@ Sequence logos can easily be combined with other ggplot2 plots.")
"0g73x6grbka7ahjh6z23m3wrcifp5rdfdiasbl8lq4sp6rplxwaa"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-scales" ,r-scales)))
+ (list r-ggplot2 r-scales))
(home-page "https://nanx.me/ggsci/")
(synopsis "Scientific journal and sci-fi themed color palettes for ggplot2")
(description
@@ -8298,9 +8080,9 @@ movies, and TV shows.")
"1ad774c7s7y4i00xd89lfigr9aybl94q98ch598k3rchanr4b1fa"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)))
+ (list r-ggplot2))
(home-page "https://github.com/const-ae/ggsignif")
(synopsis "Significance brackets for ggplot2")
(description
@@ -8326,17 +8108,17 @@ and adds the annotation to the plot.")
(properties `((upstream-name . "rstatix")))
(build-system r-build-system)
(propagated-inputs
- `(("r-broom" ,r-broom)
- ("r-car" ,r-car)
- ("r-corrplot" ,r-corrplot)
- ("r-dplyr" ,r-dplyr)
- ("r-generics" ,r-generics)
- ("r-magrittr" ,r-magrittr)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)
- ("r-tidyselect" ,r-tidyselect)))
+ (list r-broom
+ r-car
+ r-corrplot
+ r-dplyr
+ r-generics
+ r-magrittr
+ r-purrr
+ r-rlang
+ r-tibble
+ r-tidyr
+ r-tidyselect))
(home-page "https://rpkgs.datanovia.com/rstatix/")
(synopsis "Pipe-friendly framework for basic statistical tests")
(description
@@ -8362,22 +8144,22 @@ matrix.")
"0x86lmghr25k8w90yrp360dn42dhp5cjvjpdiv2s2gxfn701xcmb"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-cowplot" ,r-cowplot)
- ("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-ggrepel" ,r-ggrepel)
- ("r-ggsci" ,r-ggsci)
- ("r-ggsignif" ,r-ggsignif)
- ("r-glue" ,r-glue)
- ("r-gridextra" ,r-gridextra)
- ("r-magrittr" ,r-magrittr)
- ("r-polynom" ,r-polynom)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)
- ("r-rstatix" ,r-rstatix)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)))
+ (list r-cowplot
+ r-dplyr
+ r-ggplot2
+ r-ggrepel
+ r-ggsci
+ r-ggsignif
+ r-glue
+ r-gridextra
+ r-magrittr
+ r-polynom
+ r-purrr
+ r-rlang
+ r-scales
+ r-rstatix
+ r-tibble
+ r-tidyr))
(home-page "http://www.sthda.com/english/rpkgs/ggpubr")
(synopsis "ggplot2-based publication-ready plots")
(description
@@ -8424,7 +8206,7 @@ Analysis and its Applications.")
"0l4lpz451ll7f7lfxmb7ds24ppzhfg1c3ypvydglcc35p2dq99s8"))))
(properties `((upstream-name . "flashClust")))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/flashClust/")
(synopsis "Implementation of optimal hierarchical clustering")
(description
@@ -8446,19 +8228,19 @@ clustering.")
(properties `((upstream-name . "FactoMineR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-car" ,r-car)
- ("r-cluster" ,r-cluster)
- ("r-dt" ,r-dt)
- ("r-ellipse" ,r-ellipse)
- ("r-flashclust" ,r-flashclust)
- ("r-ggplot2" ,r-ggplot2)
- ("r-ggrepel" ,r-ggrepel)
- ("r-lattice" ,r-lattice)
- ("r-leaps" ,r-leaps)
- ("r-mass" ,r-mass)
- ("r-scatterplot3d" ,r-scatterplot3d)))
+ (list r-car
+ r-cluster
+ r-dt
+ r-ellipse
+ r-flashclust
+ r-ggplot2
+ r-ggrepel
+ r-lattice
+ r-leaps
+ r-mass
+ r-scatterplot3d))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "http://factominer.free.fr")
(synopsis "Multivariate exploratory data analysis and data mining")
(description
@@ -8484,15 +8266,15 @@ structured in groups, etc. and hierarchical cluster analysis.")
"1allvdjhd3pq8xz30b1cymwcik5iaahghrjrlnn54cwkfhfg0kv2"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-abind" ,r-abind)
- ("r-cluster" ,r-cluster)
- ("r-dendextend" ,r-dendextend)
- ("r-factominer" ,r-factominer)
- ("r-ggplot2" ,r-ggplot2)
- ("r-ggpubr" ,r-ggpubr)
- ("r-ggrepel" ,r-ggrepel)
- ("r-reshape2" ,r-reshape2)
- ("r-tidyr" ,r-tidyr)))
+ (list r-abind
+ r-cluster
+ r-dendextend
+ r-factominer
+ r-ggplot2
+ r-ggpubr
+ r-ggrepel
+ r-reshape2
+ r-tidyr))
(home-page "http://www.sthda.com/english/rpkgs/factoextra")
(synopsis "Extract and visualize the results of multivariate data analyses")
(description
@@ -8519,7 +8301,7 @@ steps and provides ggplot2-based elegant data visualization.")
"0kx5kjhr8dvqz1mq1zkijkgp29jv8b0irm1xplx1d74n2v1zh6wx"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr))) ; for vignettes
+ (list r-knitr)) ; for vignettes
(home-page "https://github.com/brodieG/fansi")
(synopsis "ANSI control sequence aware string functions")
(description
@@ -8561,13 +8343,11 @@ results to the user.")
"0bv2q4ir73sbk5ra2q4mc8wbcmiwkws8k0mjlnx9ysi2mdrm3dw7"))))
(build-system r-build-system)
(inputs
- `(("hdf5" ,hdf5)
- ("zlib" ,zlib)))
+ (list hdf5 zlib))
(propagated-inputs
- `(("r-bit64" ,r-bit64)
- ("r-r6" ,r-r6)))
+ (list r-bit64 r-r6))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://hhoeflin.github.io/hdf5r")
(synopsis "Interface to the HDF5 binary data format")
(description
@@ -8591,7 +8371,7 @@ corresponding R counterparts.")
"1ls5biiva10pb1dj3ph4griykb9vam02hkrdmlr5a5wf660hg6xn"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-iterators" ,r-iterators)))
+ (list r-iterators))
(home-page "https://cran.r-project.org/web/packages/itertools/")
(synopsis "Iterator tools")
(description
@@ -8653,11 +8433,11 @@ functions.")
"041y4zfr50y96g0kl857jcba0a3gpdpk8qfn9fj8zxzbz71k87xr"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-coda" ,r-coda)))
+ (list r-coda))
(inputs
- `(("jags" ,jags)))
+ (list jags))
(native-inputs
- `(("pkg-config" ,pkg-config)))
+ (list pkg-config))
(home-page "http://mcmc-jags.sourceforge.net")
(synopsis "Bayesian graphical models using MCMC")
(description
@@ -8702,7 +8482,7 @@ implemented in bibutils.")
(properties `((upstream-name . "Rdpack")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rbibutils" ,r-rbibutils)))
+ (list r-rbibutils))
(home-page "https://github.com/GeoBosh/Rdpack")
(synopsis "Update and manipulate Rd documentation objects")
(description
@@ -8727,12 +8507,9 @@ references and Rd files.")
"1gfx299zr4q2264q37994pirv5bd5isn1cszccz603ij3q40wajr"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-r6" ,r-r6)
- ("r-uuid" ,r-uuid)
- ("r-xml2" ,r-xml2)
- ("r-zip" ,r-zip)))
+ (list r-r6 r-uuid r-xml2 r-zip))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://davidgohel.github.io/officer")
(synopsis "Manipulation of Word and PowerPoint documents")
(description
@@ -8783,7 +8560,7 @@ on the methods that are implemented can be found in Kosmidis (2008)
(properties `((upstream-name . "brglm")))
(build-system r-build-system)
(propagated-inputs
- `(("r-profilemodel" ,r-profilemodel)))
+ (list r-profilemodel))
(home-page "https://github.com/ikosmidis/brglm")
(synopsis "Bias reduction in binomial-response generalized linear models")
(description
@@ -8859,11 +8636,7 @@ or missing responses.")
(properties `((upstream-name . "ACDm")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-plyr" ,r-plyr)
- ("r-rsolnp" ,r-rsolnp)
- ("r-zoo" ,r-zoo)))
+ (list r-dplyr r-ggplot2 r-plyr r-rsolnp r-zoo))
(home-page "https://cran.r-project.org/web/packages/ACDm/")
(synopsis "Tools for Autoregressive Conditional Duration Models")
(description
@@ -8907,8 +8680,7 @@ intervals.")
"1ky1x2cp5rd0ffd9m1fji9sq4z4jsrpxzg30brw8bb4ihfjj114r"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-stringi" ,r-stringi)
- ("r-stringr" ,r-stringr)))
+ (list r-stringi r-stringr))
(home-page "https://github.com/Tazinho/snakecase")
(synopsis "Convert strings into any case")
(description
@@ -8929,7 +8701,7 @@ parse and convert strings into cases like snake or camel among others.")
"0awlq5lxfia6m2b91w73rksp93rbwv5gwqb36wbji4rgq41rzbrx"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)))
+ (list r-data-table))
(home-page "https://github.com/leeper/prediction")
(synopsis "Tidy, type-safe prediction methods")
(description
@@ -8953,7 +8725,7 @@ other add-on packages.")
"10kc72g2hfsiipba4kalda1wxsb01nq2ax2yim386bkk0vjszwfx"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://easystats.github.io/insight/")
(synopsis "Easy access to model information for various model objects")
(description
@@ -8981,9 +8753,9 @@ information are missing.")
"17gskxr43rgbg7syla3b78g2qgksq2kj07iad4139xycqxblxya0"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-insight" ,r-insight)))
+ (list r-insight))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/strengejacke/sjlabelled")
(synopsis "Labelled data utility functions")
(description
@@ -9007,15 +8779,15 @@ vice versa), or to deal with multiple declared missing values.")
"17hcjb2j690qi2zrkwc14sr1wsid6dy6v7bfsf0bc94ql812k8g2"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-insight" ,r-insight)
- ("r-magrittr" ,r-magrittr)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-sjlabelled" ,r-sjlabelled)
- ("r-tidyselect" ,r-tidyselect)))
+ (list r-dplyr
+ r-insight
+ r-magrittr
+ r-purrr
+ r-rlang
+ r-sjlabelled
+ r-tidyselect))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/strengejacke/sjmisc")
(synopsis "Data and variable transformation functions")
(description
@@ -9059,14 +8831,14 @@ hypothesis of normality.")
(properties `((upstream-name . "moonBook")))
(build-system r-build-system)
(propagated-inputs
- `(("r-magrittr" ,r-magrittr)
- ("r-nortest" ,r-nortest)
- ("r-sjmisc" ,r-sjmisc)
- ("r-stringr" ,r-stringr)
- ("r-survival" ,r-survival)
- ("r-ztable" ,r-ztable)))
+ (list r-magrittr
+ r-nortest
+ r-sjmisc
+ r-stringr
+ r-survival
+ r-ztable))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/cardiomoon/moonBook")
(synopsis "Functions and datasets for the book by Keon-Woong Moon")
(description
@@ -9089,18 +8861,18 @@ functions.")
"01nm0357b0z4dgrplbq9ms63j51n0rgvvxyy068zdsc5p7j3lql2"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-base64enc" ,r-base64enc)
- ("r-data-table" ,r-data-table)
- ("r-gdtools" ,r-gdtools)
- ("r-htmltools" ,r-htmltools)
- ("r-knitr" ,r-knitr)
- ("r-officer" ,r-officer)
- ("r-rlang" ,r-rlang)
- ("r-rmarkdown" ,r-rmarkdown)
- ("r-uuid" ,r-uuid)
- ("r-xml2" ,r-xml2)))
+ (list r-base64enc
+ r-data-table
+ r-gdtools
+ r-htmltools
+ r-knitr
+ r-officer
+ r-rlang
+ r-rmarkdown
+ r-uuid
+ r-xml2))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://davidgohel.github.io/flextable")
(synopsis "Functions for tabular reporting")
(description
@@ -9123,7 +8895,7 @@ documents.")
(base32
"0mfzyn8n5x5x5gf382bqgq61zpw9dymrp5kzdm2sbszplmxf6xry"))))
(build-system r-build-system)
- (inputs `(("zlib" ,zlib)))
+ (inputs (list zlib))
(home-page "https://github.com/ropensci/writexl")
(synopsis "Export data frames to xlsx format")
(description
@@ -9168,10 +8940,7 @@ distribution).")
(properties `((upstream-name . "GOplot")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggdendro" ,r-ggdendro)
- ("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-rcolorbrewer" ,r-rcolorbrewer)))
+ (list r-ggdendro r-ggplot2 r-gridextra r-rcolorbrewer))
(home-page "https://github.com/wencke/wencke.github.io")
(synopsis "Visualization of functional analysis data")
(description
@@ -9240,13 +9009,11 @@ matches version and feature constraints.")
(base32
"1cz5qlxw3v8smd5vb00wlzy02mx5i0infm5hnq55hnakffd3b5wr"))))
(build-system r-build-system)
- (inputs `(("python" ,python)))
+ (inputs (list python))
(propagated-inputs
- `(("r-findpython" ,r-findpython)
- ("r-jsonlite" ,r-jsonlite)
- ("r-r6" ,r-r6)))
+ (list r-findpython r-jsonlite r-r6))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/trevorld/argparse")
(synopsis "Command line optional and positional argument parser")
(description
@@ -9288,7 +9055,7 @@ vectors.")
(base32
"165axs15fvwhrp89xd87l81q3h2qjll1vrwcsap645cwvb85nwsh"))))
(build-system r-build-system)
- (propagated-inputs `(("r-psych" ,r-psych)))
+ (propagated-inputs (list r-psych))
(home-page "https://cran.r-project.org/web/packages/orddom/")
(synopsis "Ordinal dominance statistics")
(description
@@ -9338,19 +9105,19 @@ the work.")
(properties `((upstream-name . "doBy")))
(build-system r-build-system)
(propagated-inputs
- `(("r-broom" ,r-broom)
- ("r-curry" ,r-curry)
- ("r-deriv" ,r-deriv)
- ("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-magrittr" ,r-magrittr)
- ("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-microbenchmark" ,r-microbenchmark)
- ("r-pbkrtest" ,r-pbkrtest)
- ("r-tibble" ,r-tibble)))
+ (list r-broom
+ r-curry
+ r-deriv
+ r-dplyr
+ r-ggplot2
+ r-magrittr
+ r-mass
+ r-matrix
+ r-microbenchmark
+ r-pbkrtest
+ r-tibble))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://people.math.aau.dk/~sorenh/software/doBy/")
(synopsis "Groupwise statistics, LSmeans, linear contrasts, and utilities")
(description
@@ -9378,9 +9145,7 @@ the work.")
(properties `((upstream-name . "refGenome")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dbi" ,r-dbi)
- ("r-doby" ,r-doby)
- ("r-rsqlite" ,r-rsqlite)))
+ (list r-dbi r-doby r-rsqlite))
(home-page "https://cran.r-project.org/web/packages/refGenome/")
(synopsis
"Gene and splice site annotation using annotation data from Ensembl and UCSC")
@@ -9425,7 +9190,7 @@ procedures to speed up calculations in R.")
"1fcl3yc1cf09znqbj787d3fd2kl5rp63la7pxawsgmap7nxwkp65"))))
(properties `((upstream-name . "BlockFeST")))
(build-system r-build-system)
- (propagated-inputs `(("r-basix" ,r-basix)))
+ (propagated-inputs (list r-basix))
(home-page "https://cran.r-project.org/web/packages/BlockFeST/")
(synopsis "Bayesian calculation of region-specific fixation index")
(description
@@ -9450,8 +9215,7 @@ containing one or more SNPs that evolved under directional selection.")
(properties `((upstream-name . "pROC")))
(build-system r-build-system)
(propagated-inputs
- `(("r-plyr" ,r-plyr)
- ("r-rcpp" ,r-rcpp)))
+ (list r-plyr r-rcpp))
(home-page "https://web.expasy.org/pROC/")
(synopsis "Display and analyze ROC curves")
(description
@@ -9474,7 +9238,7 @@ bootstrap. Confidence intervals can be computed for (p)AUC or ROC curves.")
"182bb727sgqi5f3pzmw8jnn328wdjrgj9lfvg49gv8s22rjd3cxm"))))
(properties `((upstream-name . "rootSolve")))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/rootSolve/")
(synopsis "Tools for the analysis of ordinary differential equations")
(description
@@ -9507,7 +9271,7 @@ differential equations} (ODE). It includes routines that:
(base32 "0wac1ksmnxa36v99ca4hv8k0rsh3igwpcllmlv9wf7i9kgqviqwi"))))
(properties `((upstream-name . "ABCanalysis")))
(build-system r-build-system)
- (propagated-inputs `(("r-plotrix" ,r-plotrix)))
+ (propagated-inputs (list r-plotrix))
(home-page "https://www.uni-marburg.de/fb12/arbeitsgruppen/datenbionik/software-en/")
(synopsis "Computed ABC Analysis")
(description
@@ -9551,17 +9315,17 @@ based on index arrays and simple triplet representations, respectively.")
`((upstream-name . "manipulateWidget")))
(build-system r-build-system)
(propagated-inputs
- `(("r-base64enc" ,r-base64enc)
- ("r-codetools" ,r-codetools)
- ("r-htmltools" ,r-htmltools)
- ("r-htmlwidgets" ,r-htmlwidgets)
- ("r-knitr" ,r-knitr)
- ("r-miniui" ,r-miniui)
- ("r-shiny" ,r-shiny)
- ("r-shinyjs" ,r-shinyjs)
- ("r-webshot" ,r-webshot)))
+ (list r-base64enc
+ r-codetools
+ r-htmltools
+ r-htmlwidgets
+ r-knitr
+ r-miniui
+ r-shiny
+ r-shinyjs
+ r-webshot))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/rte-antares-rpackage/manipulateWidget/")
(synopsis "Add even more interactivity to interactive charts")
(description
@@ -9584,8 +9348,7 @@ developers to generate user interfaces easy to maintain.")
(properties `((upstream-name . "A3")))
(build-system r-build-system)
(propagated-inputs
- `(("r-pbapply" ,r-pbapply)
- ("r-xtable" ,r-xtable)))
+ (list r-pbapply r-xtable))
(home-page "https://cran.r-project.org/web/packages/A3/")
(synopsis "Error metrics for predictive models")
(description
@@ -9679,13 +9442,13 @@ visualization and candidate genes around SNPs.")
(properties `((upstream-name . "precrec")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertthat" ,r-assertthat)
- ("r-data-table" ,r-data-table)
- ("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-rcpp" ,r-rcpp)
- ("r-withr" ,r-withr)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-assertthat
+ r-data-table
+ r-ggplot2
+ r-gridextra
+ r-rcpp
+ r-withr))
+ (native-inputs (list r-knitr))
(home-page "https://evalclass.github.io/precrec/")
(synopsis "Calculate accurate precision-recall and ROC curves")
(description
@@ -9707,15 +9470,15 @@ of precision-recall and ROC (Receiver Operator Characteristics) curves.")
(properties `((upstream-name . "NetRep")))
(build-system r-build-system)
(propagated-inputs
- `(("r-abind" ,r-abind)
- ("r-bh" ,r-bh)
- ("r-foreach" ,r-foreach)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-rhpcblasctl" ,r-rhpcblasctl)
- ("r-statmod" ,r-statmod)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-abind
+ r-bh
+ r-foreach
+ r-rcolorbrewer
+ r-rcpp
+ r-rcpparmadillo
+ r-rhpcblasctl
+ r-statmod))
+ (native-inputs (list r-knitr))
(home-page "https://cran.r-project.org/package=NetRep")
(synopsis "Permutation testing network module preservation across datasets")
(description
@@ -9738,10 +9501,9 @@ through permutation testing.")
(properties `((upstream-name . "intergraph")))
(build-system r-build-system)
(propagated-inputs
- `(("r-igraph" ,r-igraph)
- ("r-network" ,r-network)))
+ (list r-igraph r-network))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "http://mbojan.github.io/intergraph")
(synopsis "Coercion routines for network data objects")
(description
@@ -9763,7 +9525,7 @@ supported classes are those defined in packages @code{network} and
(base32 "1ih0xk88qhsmpvnxf56041wx5sk8as2f4f2gdnpnwdym9mbr9n4b"))))
(properties `((upstream-name . "ABCoptim")))
(build-system r-build-system)
- (propagated-inputs `(("r-rcpp" ,r-rcpp)))
+ (propagated-inputs (list r-rcpp))
(home-page "https://github.com/gvegayon/ABCoptim/")
(synopsis "Optimization of Artificial Bee Colony algorithm")
(description
@@ -9788,7 +9550,7 @@ colony optimization algorithm @url{http://mf.erciyes.edu.tr/abc/pub/tr06_2005.pd
(base32 "1s2skkxpzss7c29i8600psgrp0hl46jcrxqrmy2b4db8hc0kcnbx"))))
(properties `((upstream-name . "ABCp2")))
(build-system r-build-system)
- (propagated-inputs `(("r-mass" ,r-mass)))
+ (propagated-inputs (list r-mass))
(home-page "https://cran.r-project.org/web/packages/ABCp2/")
(synopsis "Approximate Bayesian Computational Model for Estimating P2")
(description
@@ -9809,15 +9571,15 @@ second male (P2) based on the best fit distribution.")
(base32 "1ghbd24yhqy3xhdxas6ccn84nkavqpgldx5ck8kijknc7qjm8k27"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-doparallel" ,r-doparallel)
- ("r-foreach" ,r-foreach)
- ("r-mass" ,r-mass)
- ("r-matrixstats" ,r-matrixstats)
- ("r-ranger" ,r-ranger)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-readr" ,r-readr)
- ("r-stringr" ,r-stringr)))
+ (list r-doparallel
+ r-foreach
+ r-mass
+ r-matrixstats
+ r-ranger
+ r-rcpp
+ r-rcpparmadillo
+ r-readr
+ r-stringr))
(home-page "https://cran.r-project.org/web/packages/abcrf/")
(synopsis "Approximate bayesian computation via random forests")
(description
@@ -9839,10 +9601,7 @@ ABC algorithms.")
(base32 "07s9dg10i8lsxl73b4n2hynca2fjgb0ykb0dz8c3zv6cgw3cyx97"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-abc" ,r-abc)
- ("r-abind" ,r-abind)
- ("r-hmisc" ,r-hmisc)
- ("r-plyr" ,r-plyr)))
+ (list r-abc r-abind r-hmisc r-plyr))
(home-page "https://github.com/dennisprangle/abctools/")
(synopsis "Tools for ABC analyses")
(description
@@ -9864,10 +9623,7 @@ and coverage methods to tune the choice of threshold.")
(base32 "0jz9vvnmcc6a38n8nzr458r65sna23bgn5r8mxdhzdlyqibihr7d"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-plyr" ,r-plyr)
- ("r-rlang" ,r-rlang)
- ("r-withr" ,r-withr)))
+ (list r-ggplot2 r-plyr r-rlang r-withr))
(home-page "https://cran.r-project.org/web/packages/ggstance/")
(synopsis "Horizontal and vertical versions of @code{r-ggplot2}")
(description
@@ -9892,12 +9648,8 @@ and coverage methods to tune the choice of threshold.")
(properties `((upstream-name . "ggnetwork")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-ggrepel" ,r-ggrepel)
- ("r-igraph" ,r-igraph)
- ("r-network" ,r-network)
- ("r-sna" ,r-sna)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-ggplot2 r-ggrepel r-igraph r-network r-sna))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/briatte/ggnetwork")
(synopsis "Geometries to plot networks with ggplot2")
(description
@@ -9919,8 +9671,7 @@ ggplot2 package.")
(properties `((upstream-name . "cvAUC")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-rocr" ,r-rocr)))
+ (list r-data-table r-rocr))
(home-page "https://github.com/ledell/cvAUC")
(synopsis "Cross-validated area under the ROC curve confidence intervals")
(description
@@ -9946,9 +9697,9 @@ repeated measures data, respectively.")
(properties `((upstream-name . "gam")))
(build-system r-build-system)
(propagated-inputs
- `(("r-foreach" ,r-foreach)))
+ (list r-foreach))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/package=gam")
(synopsis "Generalized additive models")
(description
@@ -9972,11 +9723,9 @@ Models\" (Hastie and Tibshirani, 1990).")
(properties `((upstream-name . "SuperLearner")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cvauc" ,r-cvauc)
- ("r-gam" ,r-gam)
- ("r-nnls" ,r-nnls)))
+ (list r-cvauc r-gam r-nnls))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/ecpolley/SuperLearner")
(synopsis "Super learner prediction")
(description
@@ -9998,11 +9747,9 @@ a library of prediction algorithms to be used in the super learner.")
(properties `((upstream-name . "drtmle")))
(build-system r-build-system)
(propagated-inputs
- `(("r-future-apply" ,r-future-apply)
- ("r-np" ,r-np)
- ("r-superlearner" ,r-superlearner)))
+ (list r-future-apply r-np r-superlearner))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/benkeser/drtmle")
(synopsis "Doubly-robust nonparametric estimation and inference")
(description
@@ -10030,12 +9777,9 @@ both to consistency and asymptotic normality.")
(add-after 'unpack 'set-HOME
(lambda _ (setenv "HOME" "/tmp"))))))
(propagated-inputs
- `(("r-foreach" ,r-foreach)
- ("r-future" ,r-future)
- ("r-globals" ,r-globals)
- ("r-iterators" ,r-iterators)))
+ (list r-foreach r-future r-globals r-iterators))
(native-inputs
- `(("r-r-rsp" ,r-r-rsp))) ; vignette builder
+ (list r-r-rsp)) ; vignette builder
(home-page "https://github.com/HenrikBengtsson/doFuture")
(synopsis "Foreach parallel adapter using the future API")
(description
@@ -10057,13 +9801,13 @@ futures can be used as backends for the @code{foreach} framework.")
(properties `((upstream-name . "superheat")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-ggdendro" ,r-ggdendro)
- ("r-ggplot2" ,r-ggplot2)
- ("r-gtable" ,r-gtable)
- ("r-magrittr" ,r-magrittr)
- ("r-plyr" ,r-plyr)
- ("r-scales" ,r-scales)))
+ (list r-dplyr
+ r-ggdendro
+ r-ggplot2
+ r-gtable
+ r-magrittr
+ r-plyr
+ r-scales))
(home-page "https://cran.r-project.org/package=superheat")
(synopsis "Graphical tool for exploring complex datasets using heatmaps")
(description
@@ -10086,7 +9830,7 @@ data with multiple data types.")
(properties `((upstream-name . "qualV")))
(build-system r-build-system)
(propagated-inputs
- `(("r-kernsmooth" ,r-kernsmooth)))
+ (list r-kernsmooth))
(home-page "http://qualV.R-Forge.R-Project.org/")
(synopsis "Qualitative Validation Methods")
(description
@@ -10118,10 +9862,7 @@ subsequence} (LCS) using a dynamic programming algorithm.")
(properties `((upstream-name . "mosaicCore")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-mass" ,r-mass)
- ("r-rlang" ,r-rlang)
- ("r-tidyr" ,r-tidyr)))
+ (list r-dplyr r-mass r-rlang r-tidyr))
(home-page "https://github.com/ProjectMOSAIC/mosaicCore/")
(synopsis "Common utilities for mosaic family packages")
(description
@@ -10142,15 +9883,15 @@ subsequence} (LCS) using a dynamic programming algorithm.")
(properties `((upstream-name . "labelled")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-haven" ,r-haven)
- ("r-lifecycle" ,r-lifecycle)
- ("r-rlang" ,r-rlang)
- ("r-stringr" ,r-stringr)
- ("r-tidyr" ,r-tidyr)
- ("r-vctrs" ,r-vctrs)))
+ (list r-dplyr
+ r-haven
+ r-lifecycle
+ r-rlang
+ r-stringr
+ r-tidyr
+ r-vctrs))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "http://larmarange.github.io/labelled/")
(synopsis "Manipulating labelled data")
(description
@@ -10171,19 +9912,19 @@ haven package. ")
(base32 "1ph5jd8svk8hmshi894vmmpq3zwgdmf4yn3gmdlkad68z8jynhsp"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggforce" ,r-ggforce)
- ("r-ggplot2" ,r-ggplot2)
- ("r-ggridges" ,r-ggridges)
- ("r-ggstance" ,r-ggstance)
- ("r-labelled" ,r-labelled)
- ("r-magrittr" ,r-magrittr)
- ("r-mosaiccore" ,r-mosaiccore)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)
- ("r-stringr" ,r-stringr)
- ("r-tibble" ,r-tibble)))
+ (list r-ggforce
+ r-ggplot2
+ r-ggridges
+ r-ggstance
+ r-labelled
+ r-magrittr
+ r-mosaiccore
+ r-rlang
+ r-scales
+ r-stringr
+ r-tibble))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/ProjectMOSAIC/ggformula/")
(synopsis "Formula interface for the @code{r-ggplot2}")
(description
@@ -10225,9 +9966,7 @@ used to teach mathematics, statistics, computation and modeling.")
"0wixw1ixnmcmkwczpj8m90c76727zira2rl4ighashggydkm2mlr"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-sp" ,r-sp)
- ("r-terra" ,r-terra)))
+ (list r-rcpp r-sp r-terra))
(home-page "https://www.rspatial.org/")
(synopsis "Geographic data analysis and modeling")
(description
@@ -10248,25 +9987,25 @@ Processing of very large files is supported.")
(base32 "1y0isqbva0vi5zlx1xvixbq87n4xp66ljh43qnd0cpzaz0mn21cg"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-broom" ,r-broom)
- ("r-dplyr" ,r-dplyr)
- ("r-ggdendro" ,r-ggdendro)
- ("r-ggformula" ,r-ggformula)
- ("r-ggplot2" ,r-ggplot2)
- ("r-ggrepel" ,r-ggrepel)
- ("r-glue" ,r-glue)
- ("r-gridextra" ,r-gridextra)
- ("r-lattice" ,r-lattice)
- ("r-latticeextra" ,r-latticeextra)
- ("r-lazyeval" ,r-lazyeval)
- ("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-mosaiccore" ,r-mosaiccore)
- ("r-mosaicdata" ,r-mosaicdata)
- ("r-readr" ,r-readr)
- ("r-tidyr" ,r-tidyr)))
+ (list r-broom
+ r-dplyr
+ r-ggdendro
+ r-ggformula
+ r-ggplot2
+ r-ggrepel
+ r-glue
+ r-gridextra
+ r-lattice
+ r-latticeextra
+ r-lazyeval
+ r-mass
+ r-matrix
+ r-mosaiccore
+ r-mosaicdata
+ r-readr
+ r-tidyr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/ProjectMOSAIC/mosaic/")
(synopsis "Mathematics, statistics, and computation teaching utilities")
(description
@@ -10290,9 +10029,7 @@ professional lives, but which are usually taught in isolation, if at all.")
(base32 "191gspqzdv573vaw624ri0f5cm6v4j524bjs74d4a1hn3kn6r9b7"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-lattice" ,r-lattice)
- ("r-mosaic" ,r-mosaic)
- ("r-nlme" ,r-nlme)))
+ (list r-lattice r-mosaic r-nlme))
(home-page "https://cran.r-project.org/web/packages/abd/")
(synopsis "Analysis of biological data")
(description
@@ -10313,7 +10050,7 @@ biological data by Michael Whitlock and Dolph Schluter.")
(properties `((upstream-name . "svGUI")))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/SciViews/svGUI/")
(synopsis "Functions for managing GUI clients in R")
(description
@@ -10336,13 +10073,11 @@ calls to the particular toolkits in use in function of the context.")
(properties `((upstream-name . "svDialogs")))
(build-system r-build-system)
(inputs
- `(("yad" ,yad)
- ("zenity" ,zenity)))
+ (list yad zenity))
(propagated-inputs
- `(("r-rstudioapi" ,r-rstudioapi)
- ("r-svgui" ,r-svgui)))
+ (list r-rstudioapi r-svgui))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/SciViews/svDialogs/")
(synopsis "Portable dialog boxes")
(description
@@ -10406,8 +10141,7 @@ mode are currently supported.")
(properties `((upstream-name . "ABHgenotypeR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-reshape2" ,r-reshape2)))
+ (list r-ggplot2 r-reshape2))
(home-page "https://github.com/StefanReuscher/ABHgenotypeR/")
(synopsis "Visualize and manipulate ABH genotypes")
(description
@@ -10432,13 +10166,13 @@ genotypes as \"graphical genotypes\".")
"001p2yhznrpnrjvdcmf2h3wpgdnw01wnqgid7wbq8bhavhi3888a"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ellipsis" ,r-ellipsis)
- ("r-future" ,r-future)
- ("r-globals" ,r-globals)
- ("r-lifecycle" ,r-lifecycle)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-vctrs" ,r-vctrs)))
+ (list r-ellipsis
+ r-future
+ r-globals
+ r-lifecycle
+ r-purrr
+ r-rlang
+ r-vctrs))
(home-page "https://github.com/DavisVaughan/furrr")
(synopsis "Apply mapping functions in parallel using futures")
(description
@@ -10460,14 +10194,14 @@ distributed on a compute cluster.")
(base32 "18mmlkqsrjfclk8islfjdsp8sbw6dpjj5x45kqilxdiss69gg5zd"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-magrittr" ,r-magrittr)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-stringi" ,r-stringi)
- ("r-stringr" ,r-stringr)
- ("r-tidyr" ,r-tidyr)))
+ (list r-dplyr
+ r-magrittr
+ r-purrr
+ r-rlang
+ r-rstudioapi
+ r-stringi
+ r-stringr
+ r-tidyr))
(home-page "https://github.com/abjur/abjutils/")
(synopsis "Collection of tools for jurimetrical analysis")
(description
@@ -10489,8 +10223,7 @@ removal.")
(base32 "1fzfskl9akl06nliy8hkv2a0pznpj8pwcypg3gj5r2nzvr3kan9v"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)))
+ (list r-mass r-matrix))
(home-page "https://cran.r-project.org/web/packages/abnormality/")
(synopsis "Measure a subject's abnormality with respect to a reference population")
(description
@@ -10515,7 +10248,7 @@ research.")
(properties `((upstream-name . "abodOutlier")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cluster" ,r-cluster)))
+ (list r-cluster))
(home-page "https://cran.r-project.org/web/packages/abodOutlier/")
(synopsis "Angle-based outlier detection")
(description
@@ -10543,7 +10276,7 @@ detection.")
(base32 "0n3f66nmfi5v94il1mxy026mi84w01ph2aljk60vn3mrz8kwf2ll"))))
(properties `((upstream-name . "ABPS")))
(build-system r-build-system)
- (propagated-inputs `(("r-kernlab" ,r-kernlab)))
+ (propagated-inputs (list r-kernlab))
(home-page "https://cran.r-project.org/web/packages/ABPS/")
(synopsis "Abnormal blood profile score to detect blood doping")
(description
@@ -10587,7 +10320,7 @@ for the reconstruction of gene regulatory networks.")
(base32 "0vzf5wazs92bhqhqd66v3vwmbfmnh67gb2466g1xxawim649nk05"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)))
+ (list r-mass))
(home-page "https://github.com/atahk/pscl/")
(synopsis "Political science computational laboratory")
(description
@@ -10613,8 +10346,7 @@ data;
(base32 "1nql9inx6azdzi3z4sfm2vdml2mms6krl8wzlf1dn1c97ahn57fy"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-mice" ,r-mice)
- ("r-pscl" ,r-pscl)))
+ (list r-mice r-pscl))
(home-page "https://cran.r-project.org/web/packages/accelmissing/")
(synopsis "Missing value imputation for accelerometer data")
(description
@@ -10637,7 +10369,7 @@ and the non-wearing time, selecting valid days and subjects, and creating plots.
(sha256
(base32 "009dj0zkj1zry7jr9hf4cknb686z50a2l967if64xm0dvjmp7dgs"))))
(build-system r-build-system)
- (propagated-inputs `(("r-mvtnorm" ,r-mvtnorm)))
+ (propagated-inputs (list r-mvtnorm))
(home-page "https://github.com/jaredo/mhsmm/")
(synopsis "Inference for hidden Markov and semi-Markov models")
(description
@@ -10660,7 +10392,7 @@ emission distributions.")
(sha256
(base32 "1v9znvncyigw9r25wx2ma0b7ib179b488dl0qsrhp5zrcz7mcjgm"))))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/nleqslv/")
(synopsis "Solve systems of nonlinear equations")
(description
@@ -10716,19 +10448,19 @@ on user-defined cut-points of accelerometer counts.
(base32 "1ii2vm47djxbixa75h690q1s2f9m9x6i8nkygik93j6dayr6kr1m"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-circlize" ,r-circlize)
- ("r-dbi" ,r-dbi)
- ("r-ggplot2" ,r-ggplot2)
- ("r-iterators" ,r-iterators)
- ("r-mhsmm" ,r-mhsmm)
- ("r-nleqslv" ,r-nleqslv)
- ("r-physicalactivity" ,r-physicalactivity)
- ("r-plyr" ,r-plyr)
- ("r-r-utils" ,r-r-utils)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-rsqlite" ,r-rsqlite)
- ("r-zoo" ,r-zoo)))
+ (list r-circlize
+ r-dbi
+ r-ggplot2
+ r-iterators
+ r-mhsmm
+ r-nleqslv
+ r-physicalactivity
+ r-plyr
+ r-r-utils
+ r-rcpp
+ r-rcpparmadillo
+ r-rsqlite
+ r-zoo))
(home-page "https://cran.r-project.org/web/packages/acc/")
(synopsis "Exploring accelerometer data")
(description
@@ -10773,7 +10505,7 @@ conveniently wrapped into a data frame.")
(base32
"0c2x2n1p53lcw0vx4vmy5j7m2f95i7g2iwbryl89imr99rvz617j"))))
(build-system r-build-system)
- (propagated-inputs `(("r-dbi" ,r-dbi)))
+ (propagated-inputs (list r-dbi))
(home-page "https://cran.r-project.org/web/packages/mitools/")
(synopsis "Tools for multiple imputation of missing data")
(description
@@ -10794,11 +10526,9 @@ multiple-imputation datasets.")
(properties `((upstream-name . "mixsqp")))
(build-system r-build-system)
(propagated-inputs
- `(("r-irlba" ,r-irlba)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)))
+ (list r-irlba r-rcpp r-rcpparmadillo))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/stephenslab/mixsqp")
(synopsis
"Sequential quadratic programming for maximum-likelihood estimation")
@@ -10825,15 +10555,11 @@ samples is large and the number of mixture components is not too large.")
"0h942bn7wfnzbbgq9hrs75c7igmg5r1c5sad2v0znhza4cp7p1w3"))))
(build-system r-build-system)
(inputs
- `(("imagemagick" ,imagemagick)
- ("zlib" ,zlib)))
+ (list imagemagick zlib))
(propagated-inputs
- `(("r-curl" ,r-curl)
- ("r-magrittr" ,r-magrittr)
- ("r-rcpp" ,r-rcpp)))
+ (list r-curl r-magrittr r-rcpp))
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("r-knitr" ,r-knitr)))
+ (list pkg-config r-knitr))
(home-page "https://github.com/ropensci/magick")
(synopsis "Advanced graphics and image-processing in R")
(description
@@ -10859,12 +10585,12 @@ console, resulting in an interactive editing environment.")
"0ljsszybzri531q6xab04r6zq11vchfs7y0snjzk57m3g0b9ms05"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-lattice" ,r-lattice)
- ("r-matrix" ,r-matrix)
- ("r-minqa" ,r-minqa)
- ("r-mitools" ,r-mitools)
- ("r-numderiv" ,r-numderiv)
- ("r-survival" ,r-survival)))
+ (list r-lattice
+ r-matrix
+ r-minqa
+ r-mitools
+ r-numderiv
+ r-survival))
(home-page "http://r-survey.r-forge.r-project.org/survey/")
(synopsis "Analysis of complex survey samples")
(description
@@ -10894,7 +10620,7 @@ analysis.")
(properties `((upstream-name . "gee")))
(build-system r-build-system)
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/gee/")
(synopsis "Generalized estimation equation solver")
(description
@@ -10915,13 +10641,9 @@ analysis.")
(properties `((upstream-name . "tab")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-kableextra" ,r-kableextra)
- ("r-knitr" ,r-knitr)
- ("r-mass" ,r-mass)
- ("r-survey" ,r-survey)))
+ (list r-dplyr r-kableextra r-knitr r-mass r-survey))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/tab/")
(synopsis "Create summary tables for statistical reports")
(description
@@ -10944,17 +10666,17 @@ handle data from simple random samples as well as complex surveys.")
(base32 "01v6sixx0f3nrn6ymfifb3pvd2msfrwm21kmdv38laxq29vc4rsi"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-cubature" ,r-cubature)
- ("r-data-table" ,r-data-table)
- ("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-mass" ,r-mass)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-pracma" ,r-pracma)
- ("r-rbenchmark" ,r-rbenchmark)
- ("r-rcpp" ,r-rcpp)
- ("r-survey" ,r-survey)
- ("r-tab" ,r-tab)))
+ (list r-cubature
+ r-data-table
+ r-dplyr
+ r-ggplot2
+ r-mass
+ r-mvtnorm
+ r-pracma
+ r-rbenchmark
+ r-rcpp
+ r-survey
+ r-tab))
(home-page "https://cran.r-project.org/web/packages/dvmisc/")
(synopsis "Faster computation of common statistics and miscellaneous functions")
(description
@@ -10978,8 +10700,7 @@ regression).")
(base32 "13xzrwhr4i1nj9c8vrmfdg2rmrc8n446iihcyxmy99sm99hpzyip"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-dvmisc" ,r-dvmisc)
- ("r-rcpp" ,r-rcpp)))
+ (list r-dvmisc r-rcpp))
(home-page "https://cran.r-project.org/web/packages/accelerometry/")
(synopsis "Functions for processing accelerometer data")
(description
@@ -11003,8 +10724,7 @@ algorithms to be implemented.")
(properties `((upstream-name . "AbSim")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ape" ,r-ape)
- ("r-powerlaw" ,r-powerlaw)))
+ (list r-ape r-powerlaw))
(home-page "https://cran.r-project.org/web/packages/AbSim/")
(synopsis "Time resolved simulations of antibody repertoires")
(description
@@ -11053,7 +10773,7 @@ estimation problem.")
(base32 "1m76qdmqvwpgm0sihazi2dna7cgsz9rljal18vgffb5wamwmg9k7"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-quic" ,r-quic)))
+ (list r-quic))
(home-page "https://cran.r-project.org/web/packages/abundant/")
(synopsis "Abundant regression and high-dimensional principal fitted components")
(description
@@ -11077,7 +10797,7 @@ and Rothman (2012) @url{doi:10.1214/11-AOS962}.")
(properties `((upstream-name . "Ac3net")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)))
+ (list r-data-table))
(home-page "https://cran.r-project.org/web/packages/Ac3net/")
(synopsis "Inferring directional conservative causal core gene networks")
(description "This package infers directional Conservative causal core
@@ -11194,7 +10914,7 @@ observation.")
"12aa5083k3sfrfq1jy3l94wffss9h0rga8j71jy3n8pkhiq4nn7n"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-zoo" ,r-zoo)))
+ (list r-zoo))
(home-page "https://cran.r-project.org/web/packages/sandwich/")
(synopsis "Robust Covariance Matrix Estimators")
(description
@@ -11217,10 +10937,9 @@ cross-sectional, time series, clustered, panel, and longitudinal data.")
(properties `((upstream-name . "TH.data")))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)
- ("r-survival" ,r-survival)))
+ (list r-mass r-survival))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/TH.data/")
(synopsis "Shared data sets")
(description
@@ -11241,11 +10960,7 @@ packages maintained by Torsten Hothorn.")
"02zv739mbmx672yrqqx8am229h7ps476wphig7jrrbfgay29sl21"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-codetools" ,r-codetools)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-sandwich" ,r-sandwich)
- ("r-survival" ,r-survival)
- ("r-th-data" ,r-th-data)))
+ (list r-codetools r-mvtnorm r-sandwich r-survival r-th-data))
(home-page "https://cran.r-project.org/web/packages/multcomp/")
(synopsis "Simultaneous inference in general parametric models")
(description
@@ -11269,12 +10984,9 @@ Hothorn, Westfall, 2010, CRC Press).")
"1ig94mjifhhygznv2xv1gl8hdvk618w5fcmkaj1xmpwpc64m9dnl"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-estimability" ,r-estimability)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-numderiv" ,r-numderiv)
- ("r-xtable" ,r-xtable)))
+ (list r-estimability r-mvtnorm r-numderiv r-xtable))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/rvlenth/emmeans")
(synopsis "Estimated marginal means, aka least-squares means")
(description
@@ -11298,7 +11010,7 @@ comparisons of slopes.")
"1kfzy73v3z6ipc3kdfkcjrp4b4p5k54nwk796gqi36srm93hgc2v"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/heliosdrm/pwr")
(synopsis "Basic functions for power analysis")
(description
@@ -11317,7 +11029,7 @@ Cohen (1988).")
(sha256
(base32 "1syrcdj5qg5m3zd3dlxgpfklswbalfg42w058dr09hnzqsvx0z9d"))))
(build-system r-build-system)
- (propagated-inputs `(("r-mvtnorm" ,r-mvtnorm)))
+ (propagated-inputs (list r-mvtnorm))
(home-page "https://cran.r-project.org/web/packages/libcoin")
(synopsis "Linear test statistics for permutation inference")
(description
@@ -11338,12 +11050,12 @@ and permutation inference in the framework of Strasser and Weber (1999).")
"1cpv7jx840inzg98bkhrb5yscx0gpag6br237r5qpnc2gbrd2ikm"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-libcoin" ,r-libcoin)
- ("r-matrixstats" ,r-matrixstats)
- ("r-modeltools" ,r-modeltools)
- ("r-multcomp" ,r-multcomp)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-survival" ,r-survival)))
+ (list r-libcoin
+ r-matrixstats
+ r-modeltools
+ r-multcomp
+ r-mvtnorm
+ r-survival))
(home-page "http://coin.r-forge.r-project.org")
(synopsis "Conditional inference procedures in a permutation test framework")
(description
@@ -11365,18 +11077,18 @@ correlation, censored, ordered and multivariate problems.")
"0aman4273i8hy3z0qay1nrsr7v27m4icm1j6f4w59ylix80l5myq"))))
(build-system r-build-system)
(inputs
- `(("pandoc" ,pandoc)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
- (propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-ggridges" ,r-ggridges)
- ("r-glue" ,r-glue)
- ("r-reshape2" ,r-reshape2)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-tidyselect" ,r-tidyselect)))
+ (list pandoc))
+ (native-inputs
+ (list r-knitr))
+ (propagated-inputs
+ (list r-dplyr
+ r-ggplot2
+ r-ggridges
+ r-glue
+ r-reshape2
+ r-rlang
+ r-tibble
+ r-tidyselect))
(home-page "https://mc-stan.org/bayesplot")
(synopsis "Plotting for Bayesian models")
(description
@@ -11401,8 +11113,7 @@ Bayesian modeling.")
(properties `((upstream-name . "TMB")))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)
- ("r-rcppeigen" ,r-rcppeigen)))
+ (list r-matrix r-rcppeigen))
(home-page "http://tmb-project.org")
(synopsis "Template model builder: a general random effect tool")
(description
@@ -11427,23 +11138,23 @@ detection, parallelism through BLAS and parallel user templates.")
(base32 "1cv80yjnyh6qihxf57zivihhia20gibr5f03x8aspy6382wnwlka"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-bayestestr" ,r-bayestestr)
- ("r-broom" ,r-broom)
- ("r-dplyr" ,r-dplyr)
- ("r-effectsize" ,r-effectsize)
- ("r-emmeans" ,r-emmeans)
- ("r-insight" ,r-insight)
- ("r-lme4" ,r-lme4)
- ("r-magrittr" ,r-magrittr)
- ("r-mass" ,r-mass)
- ("r-modelr" ,r-modelr)
- ("r-parameters" ,r-parameters)
- ("r-performance" ,r-performance)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-sjlabelled" ,r-sjlabelled)
- ("r-sjmisc" ,r-sjmisc)
- ("r-tidyr" ,r-tidyr)))
+ (list r-bayestestr
+ r-broom
+ r-dplyr
+ r-effectsize
+ r-emmeans
+ r-insight
+ r-lme4
+ r-magrittr
+ r-mass
+ r-modelr
+ r-parameters
+ r-performance
+ r-purrr
+ r-rlang
+ r-sjlabelled
+ r-sjmisc
+ r-tidyr))
(home-page "https://github.com/strengejacke/sjstats")
(synopsis "Functions for common statistical computations")
(description
@@ -11472,14 +11183,14 @@ models.")
(properties `((upstream-name . "glmmTMB")))
(build-system r-build-system)
(propagated-inputs
- `(("r-lme4" ,r-lme4)
- ("r-matrix" ,r-matrix)
- ("r-nlme" ,r-nlme)
- ("r-numderiv" ,r-numderiv)
- ("r-rcppeigen" ,r-rcppeigen)
- ("r-tmb" ,r-tmb)))
+ (list r-lme4
+ r-matrix
+ r-nlme
+ r-numderiv
+ r-rcppeigen
+ r-tmb))
(native-inputs
- `(("r-knitr" ,r-knitr))) ; for vignettes
+ (list r-knitr)) ; for vignettes
(home-page "https://github.com/glmmTMB")
(synopsis "Generalized linear mixed models")
(description
@@ -11505,10 +11216,9 @@ differentiation.")
(properties `((upstream-name . "bayestestR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-datawizard" ,r-datawizard)
- ("r-insight" ,r-insight)))
+ (list r-datawizard r-insight))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/easystats/bayestestR")
(synopsis "Describe Bayesian models and posterior distributions")
(description
@@ -11532,9 +11242,7 @@ ROPE percentage and pd).")
"1xjjnhqmwfflm5yfgjhycjn0fj0manvsvkk2ppifn0373bajp5n2"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-bayestestr" ,r-bayestestr)
- ("r-datawizard" ,r-datawizard)
- ("r-insight" ,r-insight)))
+ (list r-bayestestr r-datawizard r-insight))
(home-page "https://easystats.github.io/performance/")
(synopsis "Assessment of regression models performance")
(description
@@ -11560,11 +11268,9 @@ effects models and Bayesian models.")
"0xrb105kblkj3l9zlj9yy52rjlmx5x2aai1wwb5zvjr1f6nlc84l"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-insight" ,r-insight)
- ("r-mass" ,r-mass)
- ("r-sjlabelled" ,r-sjlabelled)))
+ (list r-insight r-mass r-sjlabelled))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/strengejacke/ggeffects")
(synopsis "Create tidy data frames of marginal effects for ggplot")
(description
@@ -11591,13 +11297,10 @@ results using @code{ggplot2}.")
(properties `((upstream-name . "effectsize")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bayestestr" ,r-bayestestr)
- ("r-datawizard" ,r-datawizard)
- ("r-insight" ,r-insight)
- ("r-parameters" ,r-parameters)
- ("r-performance" ,r-performance)))
+ (list r-bayestestr r-datawizard r-insight r-parameters
+ r-performance))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/easystats/effectsize")
(synopsis "Indices of effect size and standardized parameters")
(description
@@ -11619,26 +11322,26 @@ conversion of indices such as Cohen's d, r, odds, etc.")
(properties `((upstream-name . "sjPlot")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bayestestr" ,r-bayestestr)
- ("r-datawizard" ,r-datawizard)
- ("r-dplyr" ,r-dplyr)
- ("r-effectsize" ,r-effectsize)
- ("r-ggeffects" ,r-ggeffects)
- ("r-ggplot2" ,r-ggplot2)
- ("r-insight" ,r-insight)
- ("r-knitr" ,r-knitr)
- ("r-mass" ,r-mass)
- ("r-parameters" ,r-parameters)
- ("r-performance" ,r-performance)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)
- ("r-sjlabelled" ,r-sjlabelled)
- ("r-sjmisc" ,r-sjmisc)
- ("r-sjstats" ,r-sjstats)
- ("r-tidyr" ,r-tidyr)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-bayestestr
+ r-datawizard
+ r-dplyr
+ r-effectsize
+ r-ggeffects
+ r-ggplot2
+ r-insight
+ r-knitr
+ r-mass
+ r-parameters
+ r-performance
+ r-purrr
+ r-rlang
+ r-scales
+ r-sjlabelled
+ r-sjmisc
+ r-sjstats
+ r-tidyr))
+ (native-inputs
+ (list r-knitr))
(home-page "https://strengejacke.github.io/sjPlot/")
(synopsis "Data visualization for statistics in social science")
(description
@@ -11687,7 +11390,7 @@ back to file after modifications.")
(properties `((upstream-name . "gitcreds")))
(build-system r-build-system)
(inputs `(("git" ,git-minimal)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/r-lib/gitcreds")
(synopsis "Query git credentials from R")
(description
@@ -11710,13 +11413,9 @@ repositories.")
"077drbxz3rx7idv6w24ipj1p6jnzv86a3iyryab699cc9q2kjh54"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-cli" ,r-cli)
- ("r-gitcreds" ,r-gitcreds)
- ("r-httr" ,r-httr)
- ("r-ini" ,r-ini)
- ("r-jsonlite" ,r-jsonlite)))
+ (list r-cli r-gitcreds r-httr r-ini r-jsonlite))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/r-lib/gh#readme")
(synopsis "Access the GitHub API via R")
(description
@@ -11736,7 +11435,7 @@ repositories.")
"15rqc3ljmcmgfvadj1j1kq7kvibagxic8sgplhlcdqqxax9idprn"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://fs.r-lib.org")
(synopsis "Cross-platform file system operations based on libuv")
(description
@@ -11788,13 +11487,9 @@ terminals that do not support Unicode.")
(inputs
`(("git" ,git-minimal)))
(propagated-inputs
- `(("r-askpass" ,r-askpass)
- ("r-curl" ,r-curl)
- ("r-jsonlite" ,r-jsonlite)
- ("r-openssl" ,r-openssl)
- ("r-sys" ,r-sys)))
+ (list r-askpass r-curl r-jsonlite r-openssl r-sys))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://docs.ropensci.org/credentials/")
(synopsis "Tools for managing SSH and Git credentials")
(description
@@ -11822,18 +11517,16 @@ user credentials.")
(properties `((upstream-name . "gert")))
(build-system r-build-system)
(inputs
- `(("libgit2" ,libgit2)
- ("zlib" ,zlib)))
+ (list libgit2 zlib))
(propagated-inputs
- `(("r-askpass" ,r-askpass)
- ("r-credentials" ,r-credentials)
- ("r-openssl" ,r-openssl)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-sys" ,r-sys)
- ("r-zip" ,r-zip)))
+ (list r-askpass
+ r-credentials
+ r-openssl
+ r-rstudioapi
+ r-sys
+ r-zip))
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("r-knitr" ,r-knitr)))
+ (list pkg-config r-knitr))
(home-page "https://docs.ropensci.org/gert/")
(synopsis "Simple Git client for R")
(description
@@ -11857,25 +11550,25 @@ User credentials are shared with command line git through the
"1gwvirp53pa0zychd7d47d56a2vfdzz7l3p61l8m9n270ac7bc1d"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-cli" ,r-cli)
- ("r-clipr" ,r-clipr)
- ("r-crayon" ,r-crayon)
- ("r-curl" ,r-curl)
- ("r-desc" ,r-desc)
- ("r-fs" ,r-fs)
- ("r-gert" ,r-gert)
- ("r-gh" ,r-gh)
- ("r-glue" ,r-glue)
- ("r-jsonlite" ,r-jsonlite)
- ("r-lifecycle" ,r-lifecycle)
- ("r-purrr" ,r-purrr)
- ("r-rappdirs" ,r-rappdirs)
- ("r-rlang" ,r-rlang)
- ("r-rprojroot" ,r-rprojroot)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-whisker" ,r-whisker)
- ("r-withr" ,r-withr)
- ("r-yaml" ,r-yaml)))
+ (list r-cli
+ r-clipr
+ r-crayon
+ r-curl
+ r-desc
+ r-fs
+ r-gert
+ r-gh
+ r-glue
+ r-jsonlite
+ r-lifecycle
+ r-purrr
+ r-rappdirs
+ r-rlang
+ r-rprojroot
+ r-rstudioapi
+ r-whisker
+ r-withr
+ r-yaml))
(home-page "https://github.com/r-lib/usethis")
(synopsis "Automate R package and project setup")
(description
@@ -11898,7 +11591,7 @@ Rcpp, RStudio projects, and more.")
"0w3vhp652524348a4cfyvvs8z9xpxkcznw8x406nvkwfh0gdyka2"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-cli" ,r-cli)))
+ (list r-cli))
(home-page "https://github.com/r-lib/sessioninfo#readme")
(synopsis "R session information")
(description
@@ -11920,7 +11613,7 @@ more information about packages, and where they were installed from.")
"0xij8x4ga0r7rp2lxx9hw1zlzv48mfg56v8nf03gsw0dw6r7gmym"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/r-lib/remotes#readme")
(synopsis "R package installation from remote repositories")
(description
@@ -11943,7 +11636,7 @@ the code was copied over from @code{devtools}.")
"1vrvgdika1d63dwygynbv2wmd87ll8dji5dy89hj576n8hw601z2"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-processx" ,r-processx)))
+ (list r-processx))
(home-page "https://github.com/r-lib/xopen#readme")
(synopsis "Open system files, URLs, anything")
(description
@@ -11964,18 +11657,18 @@ directories or URLs with their associated programs.")
"1l696byn3kjq2xvz4wxybzaj6ink85h4lz3a35v2132ba5yyzm5v"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-callr" ,r-callr)
- ("r-cli" ,r-cli)
- ("r-curl" ,r-curl)
- ("r-desc" ,r-desc)
- ("r-digest" ,r-digest)
- ("r-pkgbuild" ,r-pkgbuild)
- ("r-prettyunits" ,r-prettyunits)
- ("r-r6" ,r-r6)
- ("r-rprojroot" ,r-rprojroot)
- ("r-sessioninfo" ,r-sessioninfo)
- ("r-withr" ,r-withr)
- ("r-xopen" ,r-xopen)))
+ (list r-callr
+ r-cli
+ r-curl
+ r-desc
+ r-digest
+ r-pkgbuild
+ r-prettyunits
+ r-r6
+ r-rprojroot
+ r-sessioninfo
+ r-withr
+ r-xopen))
(home-page "https://github.com/r-Lib/rcmdcheck#readme")
(synopsis "Run R CMD check from R and capture results")
(description
@@ -11996,9 +11689,7 @@ of the individual checks.")
"1sgv4sc737i12arh5dc3263kjsz3dzg06qihfmrqyax94mv2d01b"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-pander" ,r-pander)
- ("r-plyr" ,r-plyr)
- ("r-reshape" ,r-reshape)))
+ (list r-pander r-plyr r-reshape))
(home-page "https://cran.r-project.org/web/packages/rapportools/")
(synopsis "Miscellaneous helper functions with sane defaults for reporting")
(description
@@ -12020,10 +11711,9 @@ quick reporting.")
"1knjcr50xxns3w3kh15myjpsizn4d7fdqx071a4yj90imif07qjh"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-digest" ,r-digest)
- ("r-rcpp" ,r-rcpp)))
+ (list r-digest r-rcpp))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://rapporter.github.io/pander")
(synopsis "Render R objects into Pandoc's markdown")
(description
@@ -12048,20 +11738,20 @@ ways.")
"04qcysfywljnqkcz2b7kzpy0xv3ykkvvb14vnda63z1wvmadyhkn"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-base64enc" ,r-base64enc)
- ("r-checkmate" ,r-checkmate)
- ("r-dplyr" ,r-dplyr)
- ("r-htmltools" ,r-htmltools)
- ("r-lubridate" ,r-lubridate)
- ("r-magick" ,r-magick)
- ("r-matrixstats" ,r-matrixstats)
- ("r-pander" ,r-pander)
- ("r-pryr" ,r-pryr)
- ("r-rapportools" ,r-rapportools)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-base64enc
+ r-checkmate
+ r-dplyr
+ r-htmltools
+ r-lubridate
+ r-magick
+ r-matrixstats
+ r-pander
+ r-pryr
+ r-rapportools
+ r-tibble
+ r-tidyr))
+ (native-inputs
+ (list r-knitr))
(home-page "https://github.com/dcomtois/summarytools")
(synopsis "Tools to quickly and neatly summarize data")
(description
@@ -12085,7 +11775,7 @@ users.")
"1dka0rigfw4vj809qma2dkiwjb3nw5635ynnba5cm299cn7hb2b2"))))
(build-system r-build-system)
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://www.stat.auckland.ac.nz/~yongwang")
(synopsis "Solve regression problems under equality/inequality constraints")
(description
@@ -12108,7 +11798,7 @@ problems into least squares ones first.")
"1ihxhb42cga1hssj2jv4ah0f4hlwsky899ij5261fzh1wxvdp1xw"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-lsei" ,r-lsei)))
+ (list r-lsei))
(home-page "https://www.stat.auckland.ac.nz/~yongwang")
(synopsis "Nonparametric survival analysis")
(description
@@ -12129,8 +11819,7 @@ exact and interval-censored observations.")
"1ld0bdl4fy8dsfzm3k7a37cyxc6pfc9qs31x4pxd3z5rslghz7rj"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-mvtnorm" ,r-mvtnorm)
- ("r-rcpp" ,r-rcpp)))
+ (list r-mvtnorm r-rcpp))
(home-page "https://cran.r-project.org/web/packages/clusteval/")
(synopsis "Evaluation of clustering algorithms")
(description
@@ -12150,7 +11839,7 @@ algorithms, clusterings, and individual clusters.")
(base32
"1nfhaqblvm62j8gfkyrgba5ai0pb2fsnrxp63637mhys2bawlcm0"))))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/tweedie/")
(synopsis "Evaluation of Tweedie exponential family models")
(description
@@ -12173,8 +11862,7 @@ and related methods.")
(properties `((upstream-name . "RcppGSL")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("gsl" ,gsl)))
+ (list r-rcpp gsl))
(home-page "https://cran.r-project.org/web/packages/RcppGSL/")
(synopsis "Rcpp integration for GSL vectors and matrices")
(description
@@ -12200,11 +11888,7 @@ the interfaces between R and C++.")
"107pwv2bwird1a98chcnbld2wqj9prkf4pkncyrrp304zpdkkby1"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppgsl" ,r-rcppgsl)
- ("r-statmod" ,r-statmod)
- ("r-tweedie" ,r-tweedie)))
+ (list r-mass r-rcpp r-rcppgsl r-statmod r-tweedie))
(home-page "https://cran.r-project.org/web/packages/mvabund/")
(synopsis "Statistical methods for analysing multivariate abundance data")
(description
@@ -12225,13 +11909,9 @@ analysing multivariate abundance data in community ecology.")
"1k04n6gwk2n8kg0l3yk5j3wrqgkv5f6w04yjpif9y451hx5w7svg"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-car" ,r-car)
- ("r-lme4" ,r-lme4)
- ("r-lmertest" ,r-lmertest)
- ("r-pbkrtest" ,r-pbkrtest)
- ("r-reshape2" ,r-reshape2)))
+ (list r-car r-lme4 r-lmertest r-pbkrtest r-reshape2))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://afex.singmann.science/")
(synopsis "Analysis of factorial experiments")
(description
@@ -12253,10 +11933,7 @@ experiments using ANOVA or mixed models.")
(properties `((upstream-name . "lmerTest")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-lme4" ,r-lme4)
- ("r-mass" ,r-mass)
- ("r-numderiv" ,r-numderiv)))
+ (list r-ggplot2 r-lme4 r-mass r-numderiv))
(home-page "https://github.com/runehaubo/lmerTestR")
(synopsis "Tests in linear mixed effects models")
(description
@@ -12281,16 +11958,16 @@ tests of linear contrasts of fixed effects are also available.")
"0iim92blpa59vgz97c2pi05yhbjjmaffdbkbmk5kplfb2vmazgiy"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-afex" ,r-afex)
- ("r-data-table" ,r-data-table)
- ("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-lmertest" ,r-lmertest)
- ("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-mgcv" ,r-mgcv)
- ("r-pbkrtest" ,r-pbkrtest)))
+ (list r-afex
+ r-data-table
+ r-dplyr
+ r-ggplot2
+ r-gridextra
+ r-lmertest
+ r-mass
+ r-matrix
+ r-mgcv
+ r-pbkrtest))
(home-page "https://github.com/bcjaeger/r2glmm")
(synopsis "Compute R squared for mixed (multilevel) models")
(description
@@ -12315,14 +11992,14 @@ al. (2016)).")
(properties `((upstream-name . "cmdfun")))
(build-system r-build-system)
(propagated-inputs
- `(("r-magrittr" ,r-magrittr)
- ("r-purrr" ,r-purrr)
- ("r-r-utils" ,r-r-utils)
- ("r-rlang" ,r-rlang)
- ("r-testthat" ,r-testthat)
- ("r-usethis" ,r-usethis)))
+ (list r-magrittr
+ r-purrr
+ r-r-utils
+ r-rlang
+ r-testthat
+ r-usethis))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://snystrom.github.io/cmdfun/")
(synopsis "Framework for building interfaces to shell commands")
(description
@@ -12348,8 +12025,8 @@ inside R when they might usually leave to execute non-R software.")
"19451icfh7snjbbmpzpr1hrdf52q8ijv0ag1di3y55r2la3jxxcf"))))
(properties `((upstream-name . "rslurm")))
(build-system r-build-system)
- (propagated-inputs `(("r-whisker" ,r-whisker)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (propagated-inputs (list r-whisker))
+ (native-inputs (list r-knitr))
(home-page "http://cyberhelp.sesync.org/rslurm/")
(synopsis "Submit R calculations to a Slurm cluster")
(description
@@ -12372,9 +12049,8 @@ parallel calculations across cluster nodes.")
(properties `((upstream-name . "chk")))
(build-system r-build-system)
(propagated-inputs
- `(("r-lifecycle" ,r-lifecycle)
- ("r-rlang" ,r-rlang)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-lifecycle r-rlang))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/poissonconsulting/chk")
(synopsis "Check user-supplied function arguments")
(description
@@ -12396,10 +12072,7 @@ messages follow the tidyverse style guide.")
"1fnchf7f0hyl514bk8sc3l884kg25kb5xm4mc2l28n6hm7l6bgpg"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-gdata" ,r-gdata)
- ("r-hmisc" ,r-hmisc)
- ("r-lme4" ,r-lme4)
- ("r-mice" ,r-mice)))
+ (list r-gdata r-hmisc r-lme4 r-mice))
(home-page "https://cran.r-project.org/web/packages/weights/")
(synopsis "Weighting and weighted statistics")
(description "This package Provides a variety of functions for producing
@@ -12425,7 +12098,7 @@ address a bug.")
(properties `((upstream-name . "RcppAnnoy")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)))
+ (list r-rcpp))
(home-page "https://cran.r-project.org/web/packages/RcppAnnoy/")
(synopsis "Rcpp bindings for Annoy, a library for Approximate Nearest Neighbors")
(description
@@ -12449,7 +12122,7 @@ This package provides an R interface.")
"01z0plf1i6dyibw4ica8shmijyk1grpqb886hcga72z2cpm4xsx0"))))
(properties `((upstream-name . "RcppHNSW")))
(build-system r-build-system)
- (propagated-inputs `(("r-rcpp" ,r-rcpp)))
+ (propagated-inputs (list r-rcpp))
(home-page "https://cran.r-project.org/web/packages/RcppHNSW/")
(synopsis "Rcpp bindings for hnswlib, a library for approximate nearest neighbors")
(description
@@ -12494,8 +12167,7 @@ other values.")
"1fyjhp2zkvp7ls1sxn623far7473lpkfsqqvj3a1fczpmqs6iw4m"))))
(build-system r-build-system)
(inputs
- `(("netcdf" ,netcdf)
- ("zlib" ,zlib)))
+ (list netcdf zlib))
(home-page "https://cran.r-project.org/web/packages/ncdf4/index.html")
(synopsis "R interface to Unidata netCDF format data files")
(description
@@ -12521,7 +12193,7 @@ netCDF files.")
(properties `((upstream-name . "BiocManager")))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/BiocManager/")
(synopsis "Access the Bioconductor project package repository")
(description
@@ -12542,22 +12214,21 @@ Bioconductor packages.")
"0fqkx079z9y5b1gdg6qfz2wpw2j8q3ddflfkd9wwrkyacas6xyc9"))))
(build-system r-build-system)
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("r-knitr" ,r-knitr)))
+ (list pkg-config r-knitr))
(inputs
- `(("freetype" ,freetype)
- ("libpng" ,libpng)
- ("glu" ,glu)
- ("libx11" ,libx11)
- ("pandoc" ,pandoc)
- ("zlib" ,zlib)))
- (propagated-inputs
- `(("r-htmltools" ,r-htmltools)
- ("r-htmlwidgets" ,r-htmlwidgets)
- ("r-jsonlite" ,r-jsonlite)
- ("r-knitr" ,r-knitr)
- ("r-magrittr" ,r-magrittr)
- ("r-r6" ,r-r6)))
+ (list freetype
+ libpng
+ glu
+ libx11
+ pandoc
+ zlib))
+ (propagated-inputs
+ (list r-htmltools
+ r-htmlwidgets
+ r-jsonlite
+ r-knitr
+ r-magrittr
+ r-r6))
(home-page "https://r-forge.r-project.org/projects/rgl/")
(synopsis "3D visualization using OpenGL")
(description
@@ -12582,7 +12253,7 @@ image formats, including PNG, Postscript, SVG, PGF.")
(base32
"0djacq0irfqz4nlnx238kja73yvr1n5qybbfyl6bw1n6qgcjhza8"))))
(build-system r-build-system)
- (propagated-inputs `(("r-rcpp" ,r-rcpp)))
+ (propagated-inputs (list r-rcpp))
(home-page "https://cran.r-project.org/web/packages/multicool/")
(synopsis "Permutations of multisets in cool-lex order")
(description
@@ -12623,16 +12294,16 @@ isosurfaces.")
(base32 "02gnpyjqdlj6dl2x9i7mmks4f5nrh85j3h0kfa0v1v6wi8blx7kw"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-fnn" ,r-fnn)
- ("r-kernlab" ,r-kernlab)
- ("r-kernsmooth" ,r-kernsmooth)
- ("r-matrix" ,r-matrix)
- ("r-mclust" ,r-mclust)
- ("r-mgcv" ,r-mgcv)
- ("r-multicool" ,r-multicool)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-plot3d" ,r-plot3d)
- ("r-pracma" ,r-pracma)))
+ (list r-fnn
+ r-kernlab
+ r-kernsmooth
+ r-matrix
+ r-mclust
+ r-mgcv
+ r-multicool
+ r-mvtnorm
+ r-plot3d
+ r-pracma))
(home-page "https://www.mvstat.net/tduong/")
(synopsis "Kernel smoothing")
(description
@@ -12656,10 +12327,9 @@ hypothesis testing.")
"0yzn1w1sasilcp8v0pcjnxjv9l6lspkskqi412i6h040gqmjjf6y"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ks" ,r-ks)
- ("r-plot3d" ,r-plot3d)))
+ (list r-ks r-plot3d))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://www.mvstat.net/tduong/")
(synopsis "Inferential feature significance for kernel density estimation")
(description
@@ -12683,12 +12353,12 @@ features (e.g. local modes).")
"0pagrc1vkaz460d0lvrgb4xj6gcd920f4mrc8zpzw07c3v1s2sw1"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-abind" ,r-abind)
- ("r-coda" ,r-coda)
- ("r-lme4" ,r-lme4)
- ("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-nlme" ,r-nlme)))
+ (list r-abind
+ r-coda
+ r-lme4
+ r-mass
+ r-matrix
+ r-nlme))
(home-page "https://cran.r-project.org/web/packages/arm/")
(synopsis "Data analysis using regression and multilevel/hierarchical models")
(description
@@ -12710,10 +12380,9 @@ University Press, 2007.")
"0hki85rs8wc5950pjaw28q54rly2napfbcrx3pchlfap6wwy5kkn"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-boot" ,r-boot)
- ("r-mvtnorm" ,r-mvtnorm)))
+ (list r-boot r-mvtnorm))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/circular/")
(synopsis "Circular statistics")
(description
@@ -12735,9 +12404,7 @@ Scientific.")
"1wn2a0hx7wfr2jyj1b772w5fgl6bcqkkw8cybais2s1wyjx8kjr5"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-circular" ,r-circular)
- ("r-insol" ,r-insol)
- ("r-pbapply" ,r-pbapply)))
+ (list r-circular r-insol r-pbapply))
(home-page "https://cran.r-project.org/web/packages/activity/")
(synopsis "Animal activity statistics")
(description
@@ -12760,7 +12427,7 @@ circular variables).")
(base32
"1a7r24j59xz3lxa5wc694j6b80j8m5l86zd1sw9pvs66l8gd98kf"))))
(build-system r-build-system)
- (propagated-inputs `(("r-subplex" ,r-subplex)))
+ (propagated-inputs (list r-subplex))
(home-page "https://kingaa.github.io/ouch/")
(synopsis "Ornstein-Uhlenbeck models for phylogenetic comparative hypotheses")
(description
@@ -12822,7 +12489,7 @@ parametrizations of Nolan.")
"118rj9kjx9rzlynvhrly19qz3yxg8jzws35971ssgzrp5lwd367f"))))
(build-system r-build-system)
(inputs
- `(("gsl" ,gsl)))
+ (list gsl))
(home-page "https://cran.r-project.org/web/packages/gsl")
(synopsis "Wrapper for the GNU Scientific Library")
(description
@@ -12866,10 +12533,9 @@ Anderson-Darling Distribution\".")
(properties `((upstream-name . "sodium")))
(build-system r-build-system)
(inputs
- `(("libsodium" ,libsodium)))
+ (list libsodium))
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("r-knitr" ,r-knitr)))
+ (list pkg-config r-knitr))
(home-page "https://github.com/jeroen/sodium")
(synopsis "R bindings to the libsodium crypto library")
(description
@@ -12893,10 +12559,9 @@ after it was discovered that the NSA had backdoored Dual EC DRBG.")
(properties `((upstream-name . "softImpute")))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)))
+ (list r-matrix))
(native-inputs
- `(("gfortran" ,gfortran)
- ("r-knitr" ,r-knitr)))
+ (list gfortran r-knitr))
(home-page "https://cran.r-project.org/web/packages/softImpute")
(synopsis "Matrix completion via iterative soft-thresholded SVD")
(description
@@ -12919,9 +12584,9 @@ components).")
(base32
"0zrchp4l0jdbir2gibjf00x225y9giqk80zvqmr2yyvc12lwkw7i"))))
(build-system r-build-system)
- (inputs `(("fftw" ,fftw)))
+ (inputs (list fftw))
(native-inputs
- `(("pkg-config" ,pkg-config)))
+ (list pkg-config))
(home-page "https://github.com/krahim/fftwtools")
(synopsis "Wrapper for FFTW3")
(description
@@ -12951,7 +12616,7 @@ redundant complex conjugate when the input is real data.")
("libjpeg" ,libjpeg-turbo)
("zlib" ,zlib)))
(native-inputs
- `(("pkg-config" ,pkg-config)))
+ (list pkg-config))
(home-page "https://www.rforge.net/tiff/")
(synopsis "Read and write TIFF images")
(description
@@ -12995,11 +12660,7 @@ Processing.")
(properties `((upstream-name . "tm")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bh" ,r-bh)
- ("r-nlp" ,r-nlp)
- ("r-rcpp" ,r-rcpp)
- ("r-slam" ,r-slam)
- ("r-xml2" ,r-xml2)))
+ (list r-bh r-nlp r-rcpp r-slam r-xml2))
(home-page "http://tm.r-forge.r-project.org/")
(synopsis "Text mining package")
(description
@@ -13019,7 +12680,7 @@ Processing.")
"0ibivnhz0l06sss5rrrcvyiwg3qpbyk3qn4vx4pp90kj09x4yg0k"))))
(build-system r-build-system)
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "http://waveslim.blogspot.com")
(synopsis "Basic wavelet routines for signal processing")
(description
@@ -13044,11 +12705,10 @@ pairs (Selesnick 2001, 2002).")
"0j96yyvm6bcrrpbdx4w26piqx44a0vbsr3px9cb4zk8a8da6jwak"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-rcpp" ,r-rcpp)
- ;; The "tm" package is only "suggested" according to CRAN, but the
- ;; wordcloud package cannot be loaded without it.
- ("r-tm" ,r-tm)))
+ (list r-rcolorbrewer r-rcpp
+ ;; The "tm" package is only "suggested" according to CRAN, but the
+ ;; wordcloud package cannot be loaded without it.
+ r-tm))
(home-page "https://cran.r-project.org/web/packages/wordcloud")
(synopsis "Word clouds")
(description
@@ -13089,17 +12749,17 @@ maps.")
(base32 "1gnpm4zz0kvqng5s179301q0h5993ajynm8y0zbdz38qcmzfpsdk"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ape" ,r-ape)
- ("r-dplyr" ,r-dplyr)
- ("r-lazyeval" ,r-lazyeval)
- ("r-magrittr" ,r-magrittr)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)
- ("r-tidyselect" ,r-tidyselect)
- ("r-yulab-utils" ,r-yulab-utils)))
+ (list r-ape
+ r-dplyr
+ r-lazyeval
+ r-magrittr
+ r-rlang
+ r-tibble
+ r-tidyr
+ r-tidyselect
+ r-yulab-utils))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/GuangchuangYu/tidytree")
(synopsis "Tidy tool for phylogenetic tree data manipulation")
(description
@@ -13121,8 +12781,7 @@ manipulate tree data.")
(base32 "09khjklvzbafd7r55496by01a9g3y291d87hpy43w44dmz9fzn9a"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-biocmanager" ,r-biocmanager)
- ("r-yulab-utils" ,r-yulab-utils)))
+ (list r-biocmanager r-yulab-utils))
(home-page "https://cran.r-project.org/web/packages/rvcheck")
(synopsis "R package version check")
(description
@@ -13161,7 +12820,7 @@ giving it a description in the specific format.")
(base32
"1xm969fjq3fv1p2sqza2apz8picibj4s2agpwf1sx9nwn3b587qs"))))
(build-system r-build-system)
- (propagated-inputs `(("r-matrix" ,r-matrix)))
+ (propagated-inputs (list r-matrix))
(home-page "http://tedlab.mit.edu/~dr/SVDLIBC/")
(synopsis "Sparse truncated singular value decomposition")
(description
@@ -13185,8 +12844,7 @@ only sparse real matrices in Matrix package format are supported.")
"0f37w4lj8dpcg1sfkd7cv6qpdkanmb97mnd8zih2fxzv8bpd0rfh"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)))
+ (list r-mass r-matrix))
(home-page "https://cran.r-project.org/web/packages/speedglm")
(synopsis "Fit linear and generalized linear models to large data sets")
(description
@@ -13209,13 +12867,13 @@ linear models to large data sets by updating algorithms.")
(properties `((upstream-name . "densityClust")))
(build-system r-build-system)
(propagated-inputs
- `(("r-fnn" ,r-fnn)
- ("r-ggplot2" ,r-ggplot2)
- ("r-ggrepel" ,r-ggrepel)
- ("r-gridextra" ,r-gridextra)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-rcpp" ,r-rcpp)
- ("r-rtsne" ,r-rtsne)))
+ (list r-fnn
+ r-ggplot2
+ r-ggrepel
+ r-gridextra
+ r-rcolorbrewer
+ r-rcpp
+ r-rtsne))
(home-page "https://cran.r-project.org/web/packages/densityClust")
(synopsis "Clustering by fast search and find of density peaks")
(description
@@ -13256,10 +12914,7 @@ large datasets (> 100,000 samples) very efficiently.")
(properties `((upstream-name . "qlcMatrix")))
(build-system r-build-system)
(propagated-inputs
- `(("r-docopt" ,r-docopt)
- ("r-matrix" ,r-matrix)
- ("r-slam" ,r-slam)
- ("r-sparsesvd" ,r-sparsesvd)))
+ (list r-docopt r-matrix r-slam r-sparsesvd))
(home-page "https://cran.r-project.org/web/packages/qlcMatrix")
(synopsis "Sparse matrix functions for quantitative language comparison")
(description
@@ -13283,10 +12938,7 @@ while other are highly specific for the special data format used for
(properties `((upstream-name . "DDRTree")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bh" ,r-bh)
- ("r-irlba" ,r-irlba)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)))
+ (list r-bh r-irlba r-rcpp r-rcppeigen))
(home-page "https://cran.r-project.org/web/packages/DDRTree")
(synopsis "Learning principal graphs with DDRTree")
(description
@@ -13336,9 +12988,7 @@ definiteness of a matrix.")
(properties `((upstream-name . "RSpectra")))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)))
+ (list r-matrix r-rcpp r-rcppeigen))
(home-page "https://github.com/yixuan/RSpectra")
(synopsis "Solvers for large-scale Eigenvalue and SVD problems")
(description
@@ -13384,10 +13034,7 @@ diagnostics for controlling type-1 errors are also provided.")
"0f992dmgnr6s8g3386i9bjfyf08q8srgw7sjz2yx7snj8znq7251"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-igraph" ,r-igraph)
- ("r-lattice" ,r-lattice)
- ("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)))
+ (list r-igraph r-lattice r-mass r-matrix))
(home-page "https://cran.r-project.org/web/packages/flare")
(synopsis "Family of Lasso regression implementations")
(description
@@ -13408,7 +13055,7 @@ high dimensional sparse linear models.")
(base32
"0yawnjw063jypk3riy9xab9cmliv6c9dnabi18670khd3gzb2r9z"))))
(build-system r-build-system)
- (propagated-inputs `(("r-lars" ,r-lars)))
+ (propagated-inputs (list r-lars))
(home-page "https://github.com/lingfeiwang/lassopv")
(synopsis "Non-parametric p-value estimation for predictors in Lasso")
(description
@@ -13431,7 +13078,7 @@ the first time as the statistic.")
"0mpyf2kkfdl69pdc6brl1r6101vyc6pgr7z17s55ppg3y71k4q35"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)))
+ (list r-data-table))
(home-page "https://github.com/mrdwab/splitstackshape")
(synopsis "Stack and reshape datasets after splitting concatenated values")
(description
@@ -13458,7 +13105,7 @@ handle.")
"0h9qkl15k8v17v3g9bdnfwvh2s04ywjgg5y0xn2077dmywlja1bd"))))
(properties `((upstream-name . "TFMPvalue")))
(build-system r-build-system)
- (propagated-inputs `(("r-rcpp" ,r-rcpp)))
+ (propagated-inputs (list r-rcpp))
(home-page "https://github.com/ge11232002/TFMPvalue")
(synopsis "P-value computation for position weight matrices")
(description
@@ -13483,8 +13130,7 @@ Touzet and Varre (2007).")
"0ss9jqrvv7bhvl5j74cjrp8r866d9dlavrbbfscwz3mhkgfx06bb"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-progress" ,r-progress)
- ("r-rcpp" ,r-rcpp)))
+ (list r-progress r-rcpp))
(home-page "https://github.com/fmichonneau/rncl")
(synopsis "Interface to the Nexus class library")
(description "This package provides an interface to the Nexus class
@@ -13507,13 +13153,9 @@ library which allows parsing of NEXUS, Newick and other phylogenetic tree
"0jzr1gdvmi4l640hwwzh9bxqmpja69bn3ygnaqx37awvyh7khi2s"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ade4" ,r-ade4)
- ("r-ape" ,r-ape)
- ("r-rcpp" ,r-rcpp)
- ("r-rncl" ,r-rncl)
- ("r-rnexml" ,r-rnexml)))
+ (list r-ade4 r-ape r-rcpp r-rncl r-rnexml))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/fmichonneau/phylobase")
(synopsis "Base package for phylogenetic structures and comparative data")
(description "This package provides a base @code{S4} class for comparative
@@ -13532,20 +13174,20 @@ methods, incorporating one or more trees and trait data.")
"1wsl4xq9w5bp3wk69dw57bg0qcw1vs6ajwya4p0w1r00ck5pwrib"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ape" ,r-ape)
- ("r-dplyr" ,r-dplyr)
- ("r-httr" ,r-httr)
- ("r-lazyeval" ,r-lazyeval)
- ("r-plyr" ,r-plyr)
- ("r-reshape2" ,r-reshape2)
- ("r-stringi" ,r-stringi)
- ("r-stringr" ,r-stringr)
- ("r-tidyr" ,r-tidyr)
- ("r-uuid" ,r-uuid)
- ("r-xml" ,r-xml)
- ("r-xml2" ,r-xml2)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-ape
+ r-dplyr
+ r-httr
+ r-lazyeval
+ r-plyr
+ r-reshape2
+ r-stringi
+ r-stringr
+ r-tidyr
+ r-uuid
+ r-xml
+ r-xml2))
+ (native-inputs
+ (list r-knitr))
(home-page "https://docs.ropensci.org/RNeXML/")
(synopsis "Semantically rich I/O for the NeXML Format")
(description "This package provides access to phyloinformatic data in
@@ -13567,7 +13209,7 @@ and compatibility with @code{ape} objects.")
"0bz10ar6hrgkvlzh9j2im24kwi3s2nnax668z40a2wj6s5xghqlr"))))
(properties `((upstream-name . "RNifti")))
(build-system r-build-system)
- (propagated-inputs `(("r-rcpp" ,r-rcpp)))
+ (propagated-inputs (list r-rcpp))
(home-page "https://github.com/jonclayden/RNifti")
(synopsis "Fast R and C++ access to NIfTI images")
(description
@@ -13628,7 +13270,7 @@ substitutions, amongst other features.")
(base32
"0zynplxqvbmf23cm2rsz3wz2jx6mv55z94mn1k44ny3lx625cnpw"))))
(build-system r-build-system)
- (propagated-inputs `(("r-ore" ,r-ore)))
+ (propagated-inputs (list r-ore))
(home-page "https://github.com/jonclayden/reportr")
(synopsis "General message and error reporting system")
(description
@@ -13653,10 +13295,7 @@ conditional reporting based on the current \"output level\".")
(properties `((upstream-name . "tractor.base")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ore" ,r-ore)
- ("r-reportr" ,r-reportr)
- ("r-rnifti" ,r-rnifti)
- ("r-shades" ,r-shades)))
+ (list r-ore r-reportr r-rnifti r-shades))
(home-page "https://www.tractor-mri.org.uk")
(synopsis "Read, manipulate and visualize magnetic resonance images")
(description
@@ -13681,9 +13320,9 @@ handling.")
(properties `((upstream-name . "grImport")))
(build-system r-build-system)
(inputs
- `(("ghostscript" ,ghostscript)))
+ (list ghostscript))
(propagated-inputs
- `(("r-xml" ,r-xml)))
+ (list r-xml))
(home-page "https://cran.r-project.org/web/packages/grImport")
(synopsis "Convert, import, and draw PostScript pictures")
(description
@@ -13705,10 +13344,7 @@ PostScript pictures in R plots.")
(properties `((upstream-name . "grImport2")))
(build-system r-build-system)
(propagated-inputs
- `(("r-base64enc" ,r-base64enc)
- ("r-jpeg" ,r-jpeg)
- ("r-png" ,r-png)
- ("r-xml" ,r-xml)))
+ (list r-base64enc r-jpeg r-png r-xml))
(home-page "https://cran.r-project.org/web/packages/grImport2/")
(synopsis "Import SVG graphics")
(description
@@ -13735,7 +13371,7 @@ be imported and then exported via the @code{gridSVG} package.")
"1ck7j13x701g67bx81x7plszz804jfhl1yg42krcj9x88vm5cscr"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)))
+ (list r-rcpp))
(home-page "https://cran.r-project.org/web/packages/kohonen")
(synopsis "Supervised and unsupervised self-organising maps")
(description
@@ -13757,7 +13393,7 @@ inventor of the SOM.")
(base32
"07vcrrxvswrvfiha6f3ikn640yg0m2b4yd9lkmim1g0jmsmpfp8f"))))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/nnls")
(synopsis "Lawson-Hanson algorithm for non-negative least squares")
(description
@@ -13779,7 +13415,7 @@ the combination of non-negative and non-positive constraints.")
"0vy6jdyvp751430sf2f690yhasjr70cpk3p3lnaaxjq3fs5gg99g"))))
(properties `((upstream-name . "Iso")))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://www.stat.auckland.ac.nz/~rolf/")
(synopsis "Functions to perform isotonic regression")
(description
@@ -13803,10 +13439,7 @@ linear order on both variables.")
`((upstream-name . "ChemometricsWithR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-devtools" ,r-devtools)
- ("r-kohonen" ,r-kohonen)
- ("r-mass" ,r-mass)
- ("r-pls" ,r-pls)))
+ (list r-devtools r-kohonen r-mass r-pls))
(home-page "https://github.com/rwehrens/CWR")
(synopsis "Chemometrics with R")
(description
@@ -13829,8 +13462,7 @@ Life Sciences\" by Ron Wehrens, Springer (2011).")
(properties `((upstream-name . "ALS")))
(build-system r-build-system)
(propagated-inputs
- `(("r-iso" ,r-iso)
- ("r-nnls" ,r-nnls)))
+ (list r-iso r-nnls))
(home-page "https://cran.r-project.org/web/packages/ALS")
(synopsis "Multivariate curve resolution alternating least squares")
(description
@@ -13859,8 +13491,7 @@ decomposition is shared between datasets.")
"1y022363a4pp0mnji91sjh1qiyspkh09sybqwj03r9pmwrd7q93x"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-sandwich" ,r-sandwich)
- ("r-zoo" ,r-zoo)))
+ (list r-sandwich r-zoo))
(home-page "https://cran.r-project.org/web/packages/strucchange")
(synopsis "Testing, monitoring, and dating structural changes")
(description
@@ -13928,7 +13559,7 @@ library.")
(properties `((upstream-name . "ontologyIndex")))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/ontologyIndex")
(synopsis "Functions for processing ontologies in R")
(description
@@ -13949,17 +13580,17 @@ and manipulating sets of ontological terms.")
"0fypj70c1fjmvs57birik76wfx8a2fs4gzicbb52k57i6clwlijd"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-cli" ,r-cli)
- ("r-fs" ,r-fs)
- ("r-glue" ,r-glue)
- ("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-rappdirs" ,r-rappdirs)
- ("r-rlang" ,r-rlang)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-withr" ,r-withr)))
+ (list r-cli
+ r-fs
+ r-glue
+ r-httr
+ r-jsonlite
+ r-rappdirs
+ r-rlang
+ r-rstudioapi
+ r-withr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://gargle.r-lib.org")
(synopsis "Utilities for working with Google APIs")
(description
@@ -13981,21 +13612,21 @@ preparing, executing, and processing HTTP requests.")
"02msq61l7vamzpvbhvalh3qil1aa7pr68pwpsivbb6pvz6p4zyns"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertthat" ,r-assertthat)
- ("r-bit64" ,r-bit64)
- ("r-curl" ,r-curl)
- ("r-dbi" ,r-dbi)
- ("r-gargle" ,r-gargle)
- ("r-glue" ,r-glue)
- ("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-lifecycle" ,r-lifecycle)
- ("r-prettyunits" ,r-prettyunits)
- ("r-progress" ,r-progress)
- ("r-rapidjsonr" ,r-rapidjsonr)
- ("r-rcpp" ,r-rcpp)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)))
+ (list r-assertthat
+ r-bit64
+ r-curl
+ r-dbi
+ r-gargle
+ r-glue
+ r-httr
+ r-jsonlite
+ r-lifecycle
+ r-prettyunits
+ r-progress
+ r-rapidjsonr
+ r-rcpp
+ r-rlang
+ r-tibble))
(home-page "https://github.com/rstats-db/bigrquery")
(synopsis "R interface to Google's BigQuery API")
(description
@@ -14019,7 +13650,7 @@ preparing, executing, and processing HTTP requests.")
(modify-phases %standard-phases
(add-after 'unpack 'set-CC
(lambda _ (setenv "CC" "gcc") #t)))))
- (inputs `(("gmp" ,gmp)))
+ (inputs (list gmp))
(home-page "https://cran.r-project.org/web/packages/gmp")
(synopsis "Multiple precision arithmetic")
(description
@@ -14043,12 +13674,11 @@ limitations\" using the GNU Multiple Precision library.")
(properties `((upstream-name . "Rmpfr")))
(build-system r-build-system)
(inputs
- `(("mpfr" ,mpfr)
- ("gmp" ,gmp)))
+ (list mpfr gmp))
(propagated-inputs
- `(("r-gmp" ,r-gmp)))
+ (list r-gmp))
(native-inputs
- `(("pkg-config" ,pkg-config)))
+ (list pkg-config))
(home-page "http://rmpfr.r-forge.r-project.org/")
(synopsis "R bindings to the MPFR library")
(description
@@ -14095,7 +13725,7 @@ want to include run-time testing features in their own packages.")
`((upstream-name . "assertive.properties")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertive-base" ,r-assertive-base)))
+ (list r-assertive-base))
(home-page "https://bitbucket.org/richierocks/assertive.properties")
(synopsis "Assertions to check properties of variables")
(description
@@ -14120,7 +13750,7 @@ testing features in their own packages.")
`((upstream-name . "assertive.numbers")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertive-base" ,r-assertive-base)))
+ (list r-assertive-base))
(home-page "https://bitbucket.org/richierocks/assertive.numbers")
(synopsis "Assertions to check properties of numbers")
(description
@@ -14144,7 +13774,7 @@ who want to include run-time testing features in their own packages.")
`((upstream-name . "assertive.sets")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertive-base" ,r-assertive-base)))
+ (list r-assertive-base))
(home-page "https://bitbucket.org/richierocks/assertive.sets")
(synopsis "Assertions to check properties of sets")
(description
@@ -14168,7 +13798,7 @@ who want to include run-time testing features in their own packages.")
`((upstream-name . "assertive.matrices")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertive-base" ,r-assertive-base)))
+ (list r-assertive-base))
(home-page "https://bitbucket.org/richierocks/assertive.matrices")
(synopsis "Assertions to check properties of matrices")
(description
@@ -14193,7 +13823,7 @@ packages.")
`((upstream-name . "assertive.models")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertive-base" ,r-assertive-base)))
+ (list r-assertive-base))
(home-page "https://bitbucket.org/richierocks/assertive.models")
(synopsis "Assertions to check properties of models")
(description
@@ -14217,7 +13847,7 @@ who want to include run-time testing features in their own packages.")
`((upstream-name . "assertive.reflection")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertive-base" ,r-assertive-base)))
+ (list r-assertive-base))
(home-page "https://bitbucket.org/richierocks/assertive.reflection")
(synopsis "Assertions for checking the state of R")
(description
@@ -14242,9 +13872,7 @@ want to include run-time testing features in their own packages.")
`((upstream-name . "assertive.types")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertive-base" ,r-assertive-base)
- ("r-assertive-properties" ,r-assertive-properties)
- ("r-codetools" ,r-codetools)))
+ (list r-assertive-base r-assertive-properties r-codetools))
(home-page "https://bitbucket.org/richierocks/assertive.types")
(synopsis "Assertions to check types of variables")
(description
@@ -14268,8 +13896,7 @@ who want to include run-time testing features in their own packages.")
`((upstream-name . "assertive.files")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertive-base" ,r-assertive-base)
- ("r-assertive-numbers" ,r-assertive-numbers)))
+ (list r-assertive-base r-assertive-numbers))
(home-page "https://bitbucket.org/richierocks/assertive.files")
(synopsis "Assertions to check properties of files")
(description
@@ -14294,9 +13921,7 @@ packages.")
`((upstream-name . "assertive.code")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertive-base" ,r-assertive-base)
- ("r-assertive-properties" ,r-assertive-properties)
- ("r-assertive-types" ,r-assertive-types)))
+ (list r-assertive-base r-assertive-properties r-assertive-types))
(home-page "https://bitbucket.org/richierocks/assertive.code")
(synopsis "Assertions to check properties of code")
(description
@@ -14320,8 +13945,7 @@ who want to include run-time testing features in their own packages.")
`((upstream-name . "assertive.datetimes")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertive-base" ,r-assertive-base)
- ("r-assertive-types" ,r-assertive-types)))
+ (list r-assertive-base r-assertive-types))
(home-page "https://bitbucket.org/richierocks/assertive.datetimes")
(synopsis "Assertions to check properties of dates and times")
(description
@@ -14346,9 +13970,7 @@ packages.")
`((upstream-name . "assertive.strings")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertive-base" ,r-assertive-base)
- ("r-assertive-types" ,r-assertive-types)
- ("r-stringi" ,r-stringi)))
+ (list r-assertive-base r-assertive-types r-stringi))
(home-page "https://bitbucket.org/richierocks/assertive.strings")
(synopsis "Assertions to check properties of strings")
(description
@@ -14372,8 +13994,7 @@ who want to include run-time testing features in their own packages.")
`((upstream-name . "assertive.data.us")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertive-base" ,r-assertive-base)
- ("r-assertive-strings" ,r-assertive-strings)))
+ (list r-assertive-base r-assertive-strings))
(home-page "https://bitbucket.org/richierocks/assertive.data.us")
(synopsis "Assertions to check properties of strings")
(description
@@ -14398,8 +14019,7 @@ their own packages.")
`((upstream-name . "assertive.data.uk")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertive-base" ,r-assertive-base)
- ("r-assertive-strings" ,r-assertive-strings)))
+ (list r-assertive-base r-assertive-strings))
(home-page "https://bitbucket.org/richierocks/assertive.data.uk")
(synopsis "Assertions to check properties of strings")
(description
@@ -14424,8 +14044,7 @@ their own packages.")
`((upstream-name . "assertive.data")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertive-base" ,r-assertive-base)
- ("r-assertive-strings" ,r-assertive-strings)))
+ (list r-assertive-base r-assertive-strings))
(home-page "https://bitbucket.org/richierocks/assertive.data")
(synopsis "Assertions to check properties of data")
(description
@@ -14448,24 +14067,24 @@ features in their own packages.")
"02palil82idqhhshcdjsfsja9qkqnd0dczqzj5gbccy4hfg1c0y4"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertive-base" ,r-assertive-base)
- ("r-assertive-code" ,r-assertive-code)
- ("r-assertive-data" ,r-assertive-data)
- ("r-assertive-data-uk" ,r-assertive-data-uk)
- ("r-assertive-data-us" ,r-assertive-data-us)
- ("r-assertive-datetimes" ,r-assertive-datetimes)
- ("r-assertive-files" ,r-assertive-files)
- ("r-assertive-matrices" ,r-assertive-matrices)
- ("r-assertive-models" ,r-assertive-models)
- ("r-assertive-numbers" ,r-assertive-numbers)
- ("r-assertive-properties" ,r-assertive-properties)
- ("r-assertive-reflection" ,r-assertive-reflection)
- ("r-assertive-sets" ,r-assertive-sets)
- ("r-assertive-strings" ,r-assertive-strings)
- ("r-assertive-types" ,r-assertive-types)
- ("r-knitr" ,r-knitr)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-assertive-base
+ r-assertive-code
+ r-assertive-data
+ r-assertive-data-uk
+ r-assertive-data-us
+ r-assertive-datetimes
+ r-assertive-files
+ r-assertive-matrices
+ r-assertive-models
+ r-assertive-numbers
+ r-assertive-properties
+ r-assertive-reflection
+ r-assertive-sets
+ r-assertive-strings
+ r-assertive-types
+ r-knitr))
+ (native-inputs
+ (list r-knitr))
(home-page "https://bitbucket.org/richierocks/assertive")
(synopsis "Readable check functions to ensure code integrity")
(description
@@ -14487,7 +14106,7 @@ to throw errors if they aren't in the right form.")
"1im5k8jbviwj2i42mq1kmjskh80isa7jr9w8i0fknidrzzy2h2zi"))))
(properties `((upstream-name . "dotCall64")))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://git.math.uzh.ch/reinhard.furrer/dotCall64")
(synopsis "Enhanced foreign function interface supporting long vectors")
(description
@@ -14510,10 +14129,9 @@ This makes it a convenient and fast interface to C/C++ and Fortran code.")
(base32 "03c50wfyrzcmrcv9mkgj8dmdg2cwkh4p4ys8gaclr8w7ym45qav3"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-dotcall64" ,r-dotcall64)))
+ (list r-dotcall64))
(native-inputs
- `(("gfortran" ,gfortran)
- ("r-knitr" ,r-knitr)))
+ (list gfortran r-knitr))
(home-page "https://www.math.uzh.ch/pages/spam/")
(synopsis "Sparse matrix algebra")
(description
@@ -14541,11 +14159,9 @@ Differences with other sparse matrix packages are:
(base32 "1hs4k5a9hh0r5fsrnpnvs6wvf78xpjzj8a2j6643dsz73a5q6ln6"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-maps" ,r-maps)
- ("r-spam" ,r-spam)
- ("r-viridis" ,r-viridis)))
+ (list r-maps r-spam r-viridis))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://www.image.ucar.edu/fields")
(synopsis "Tools for spatial data")
(description
@@ -14570,8 +14186,7 @@ covariance functions for large data sets.")
`((upstream-name . "SpatialExtremes")))
(build-system r-build-system)
(propagated-inputs
- `(("r-fields" ,r-fields)
- ("r-maps" ,r-maps)))
+ (list r-fields r-maps))
(home-page "http://spatialextremes.r-forge.r-project.org/")
(synopsis "Modelling spatial extremes")
(description
@@ -14596,12 +14211,12 @@ max-stable processes only), model checking and selection and prediction.")
"0c8xn8ripzq270hy8d16fcnx02l02alddznd7fqwk3jyi6113h1y"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-car" ,r-car)
- ("r-gtools" ,r-gtools)
- ("r-mass" ,r-mass)
- ("r-multcomp" ,r-multcomp)
- ("r-plotrix" ,r-plotrix)
- ("r-scales" ,r-scales)))
+ (list r-car
+ r-gtools
+ r-mass
+ r-multcomp
+ r-plotrix
+ r-scales))
(home-page "https://cran.r-project.org/web/packages/drc")
(synopsis "Analysis of dose-response curves")
(description
@@ -14642,7 +14257,7 @@ for association and heterogeneity.")
(base32
"1546jqhhw5h177ii8jkdikyd26rv6gwkav816np1zks4p7zgsljj"))))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/bootstrap")
(synopsis "Functions for the book \"An Introduction to the Bootstrap\"")
(description
@@ -14703,7 +14318,7 @@ discovery rates.")
(base32
"046w3xbr535c5jyd68adv42a7limxp1mv57b5w6w673w707lmw2p"))))
(build-system r-build-system)
- (propagated-inputs `(("r-corpcor" ,r-corpcor)))
+ (propagated-inputs (list r-corpcor))
(home-page "http://strimmerlab.org/software/longitudinal/")
(synopsis "Analysis of multiple time course data")
(description
@@ -14727,9 +14342,7 @@ dynamical correlation and dynamical covariance.")
(properties `((upstream-name . "GeneNet")))
(build-system r-build-system)
(propagated-inputs
- `(("r-corpcor" ,r-corpcor)
- ("r-fdrtool" ,r-fdrtool)
- ("r-longitudinal" ,r-longitudinal)))
+ (list r-corpcor r-fdrtool r-longitudinal))
(home-page "http://strimmerlab.org/software/genenet/")
(synopsis "Modeling and inferring gene networks")
(description
@@ -14752,9 +14365,9 @@ putative directions).")
(base32
"0qj37ljdva3v29s01dkrbg31mcfzy3bl145cp40d54v4h9xhcghc"))))
(build-system r-build-system)
- (inputs `(("zlib" ,zlib)))
+ (inputs (list zlib))
(propagated-inputs
- `(("r-refgenome" ,r-refgenome)))
+ (list r-refgenome))
(home-page "https://cran.r-project.org/web/packages/rbamtools")
(synopsis "Read and write BAM (binary alignment) files")
(description
@@ -14775,7 +14388,7 @@ library.")
"0l1pmfr9kmc90rl5s9b0141451rxrjmiiasp3lsvl2x3ps0smqaj"))))
(properties `((upstream-name . "protViz")))
(build-system r-build-system)
- (propagated-inputs `(("r-rcpp" ,r-rcpp)))
+ (propagated-inputs (list r-rcpp))
(home-page "https://github.com/protViz/protViz/")
(synopsis "Visualizing and analyzing mass spectrometry data in proteomics")
(description
@@ -14798,9 +14411,9 @@ But it can also be used to do data analysis for small scale data sets.")
(base32 "1xnx2zanw548prxsw2zw5cddkkg6kj97jgyzw67achq5mnsvfbg8"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-survival" ,r-survival)))
+ (list r-survival))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/cmprsk")
(synopsis "Subdistribution analysis of competing risks")
(description
@@ -14825,11 +14438,7 @@ JASA, 94:496-509.")
"1hvrplmdpjjpjji663rw0vjbbrzj2nvr04d1nkc8bf46p4ixyxgy"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-lattice" ,r-lattice)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-survival" ,r-survival)))
+ (list r-data-table r-lattice r-rcpp r-rcpparmadillo r-survival))
(home-page "https://cran.r-project.org/web/packages/etm")
(synopsis "Empirical transition matrix")
(description
@@ -14852,18 +14461,18 @@ model with finite state space using the Aalen-Johansen estimator.")
(properties `((upstream-name . "Epi")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cmprsk" ,r-cmprsk)
- ("r-data-table" ,r-data-table)
- ("r-dplyr" ,r-dplyr)
- ("r-etm" ,r-etm)
- ("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-mgcv" ,r-mgcv)
- ("r-numderiv" ,r-numderiv)
- ("r-plyr" ,r-plyr)
- ("r-purrr" ,r-purrr)
- ("r-survival" ,r-survival)
- ("r-zoo" ,r-zoo)))
+ (list r-cmprsk
+ r-data-table
+ r-dplyr
+ r-etm
+ r-mass
+ r-matrix
+ r-mgcv
+ r-numderiv
+ r-plyr
+ r-purrr
+ r-survival
+ r-zoo))
(home-page "https://BendixCarstensen.com/Epi/")
(synopsis "Statistical analysis in epidemiology")
(description
@@ -14889,7 +14498,7 @@ number of epidemiological data sets.")
(base32
"1zyrisy3c4cz896j1bjh61sf57wdl9p8ywdq268cl819szfq78mx"))))
(build-system r-build-system)
- (propagated-inputs `(("r-mass" ,r-mass)))
+ (propagated-inputs (list r-mass))
(home-page "https://cran.r-project.org/web/packages/ppls")
(synopsis "Penalized partial least squares")
(description
@@ -14911,11 +14520,7 @@ regression coefficients can be conducted via jackknifing.")
(base32 "1sl457a1lndrx98y2j9a2smanawx2iqlhl82iand0g3p5xp8ch4j"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-igraph" ,r-igraph)
- ("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)))
+ (list r-igraph r-mass r-matrix r-rcpp r-rcppeigen))
(home-page "https://cran.r-project.org/web/packages/huge")
(synopsis "High-dimensional undirected graph estimation")
(description
@@ -14937,11 +14542,7 @@ screening, graph estimation, and model selection techniques into a pipeline.")
"0vgs6k92vdr0cmb8cwbv2ff6qavw30agskfd8bfh17hsskrisvx0"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-epi" ,r-epi)
- ("r-genenet" ,r-genenet)
- ("r-glmnet" ,r-glmnet)
- ("r-mass" ,r-mass)
- ("r-ppls" ,r-ppls)))
+ (list r-epi r-genenet r-glmnet r-mass r-ppls))
(home-page "https://cran.r-project.org/web/packages/parcor")
(synopsis "Regularized estimation of partial correlation matrices")
(description
@@ -14993,7 +14594,7 @@ by change of variable.")
(add-after 'unpack 'set-HOME
(lambda _ (setenv "HOME" "/tmp"))))))
(native-inputs
- `(("r-r-rsp" ,r-r-rsp))) ; vignette builder
+ (list r-r-rsp)) ; vignette builder
(home-page "https://github.com/HenrikBengtsson/listenv")
(synopsis "Environments behaving (almost) as lists")
(description
@@ -15016,7 +14617,7 @@ subsetting.")
"1wrjiiif6rpc268zz79pvpw33si6n6ffgxdnxmmcracwhb5vqg90"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-codetools" ,r-codetools)))
+ (list r-codetools))
(home-page "https://github.com/HenrikBengtsson/globals")
(synopsis "Identify global objects in R expressions")
(description
@@ -15073,12 +14674,9 @@ port-forwarding to your local computer.")
(add-after 'unpack 'set-HOME
(lambda _ (setenv "HOME" "/tmp"))))))
(propagated-inputs
- `(("r-digest" ,r-digest)
- ("r-globals" ,r-globals)
- ("r-listenv" ,r-listenv)
- ("r-parallelly" ,r-parallelly)))
+ (list r-digest r-globals r-listenv r-parallelly))
(native-inputs
- `(("r-r-rsp" ,r-r-rsp))) ; vignette builder
+ (list r-r-rsp)) ; vignette builder
(home-page "https://github.com/HenrikBengtsson/future")
(synopsis "Unified parallel and distributed processing in R")
(description
@@ -15112,10 +14710,9 @@ the local machine to, say, distributed processing on a remote compute cluster.")
(add-after 'unpack 'set-HOME
(lambda _ (setenv "HOME" "/tmp"))))))
(propagated-inputs
- `(("r-future" ,r-future)
- ("r-globals" ,r-globals)))
+ (list r-future r-globals))
(native-inputs
- `(("r-r-rsp" ,r-r-rsp))) ; vignette builder
+ (list r-r-rsp)) ; vignette builder
(home-page "https://github.com/HenrikBengtsson/future.apply")
(synopsis "Apply function to elements in parallel using futures")
(description
@@ -15139,7 +14736,7 @@ machine or distributed on a compute cluster.")
"07p2hjmpcwcsang8z9sjkpy94rydcin7m3hyvcgzgm5cd6w8c1p4"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)))
+ (list r-matrix))
(home-page "https://github.com/erichson/rSVD")
(synopsis "Randomized singular value decomposition")
(description
@@ -15171,11 +14768,7 @@ functions are provided.")
"00fk5fr5zsk2qxc1kfhmshhjxgnamm3401089sx8m2l529zd6r8j"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-codetools" ,r-codetools)
- ("r-crayon" ,r-crayon)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)))
+ (list r-codetools r-crayon r-purrr r-rlang r-tibble))
(home-page "https://github.com/r-lib/sloop")
(synopsis "Helpers for object-oriented programming in R")
(description
@@ -15196,7 +14789,7 @@ using @code{S3}.")
(base32
"1aa76ir1kp67hiz7dr60azyc71yzslshyc640fjh0fpw0sp5kwbc"))))
(build-system r-build-system)
- (propagated-inputs `(("r-mass" ,r-mass)))
+ (propagated-inputs (list r-mass))
(home-page "https://cran.r-project.org/web/packages/capushe/index.html")
(synopsis "Calibrating penalties using slope heuristics")
(description
@@ -15219,9 +14812,7 @@ heuristics.")
(properties `((upstream-name . "doRNG")))
(build-system r-build-system)
(propagated-inputs
- `(("r-foreach" ,r-foreach)
- ("r-iterators" ,r-iterators)
- ("r-rngtools" ,r-rngtools)))
+ (list r-foreach r-iterators r-rngtools))
(home-page "https://renozao.github.io/doRNG/")
(synopsis "Generic reproducible parallel backend for foreach loops")
(description
@@ -15246,8 +14837,8 @@ chosen parallel environment and associated foreach backend.")
"1vc8gy4slsywcwxq532373i0dq73fhs5cac9mr6zz2pjaaxjghhq"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)))
- (native-inputs `(("gfortran" ,gfortran)))
+ (list r-matrix))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/blockmodeling")
(synopsis "Generalized and classical blockmodeling of valued networks")
(description
@@ -15271,10 +14862,7 @@ algorithms) can be computed and partitioned matrices can be plotted.")
(properties `((upstream-name . "UpSetR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-plyr" ,r-plyr)
- ("r-scales" ,r-scales)))
+ (list r-ggplot2 r-gridextra r-plyr r-scales))
(home-page "https://github.com/hms-dbmi/UpSetR")
(synopsis "Visualize intersecting sets")
(description
@@ -15303,8 +14891,7 @@ several common set, element and attribute related tasks.")
;; non-interactively.
(arguments '(#:tests? #f))
(propagated-inputs
- `(("r-htmltools" ,r-htmltools)
- ("r-shiny" ,r-shiny)))
+ (list r-htmltools r-shiny))
(home-page "https://ebailey78.github.io/shinyBS/")
(synopsis "Twitter Bootstrap components for Shiny")
(description
@@ -15340,13 +14927,9 @@ several common set, element and attribute related tasks.")
(invoke "esbuild" source "--minify"
(string-append "--outfile=" target)))))))))
(propagated-inputs
- `(("r-htmltools" ,r-htmltools)
- ("r-htmlwidgets" ,r-htmlwidgets)
- ("r-jsonlite" ,r-jsonlite)
- ("r-shiny" ,r-shiny)))
+ (list r-htmltools r-htmlwidgets r-jsonlite r-shiny))
(native-inputs
- `(("r-knitr" ,r-knitr)
- ("esbuild" ,esbuild)))
+ (list r-knitr esbuild))
(home-page "https://github.com/yang-tang/shinyjqui")
(synopsis "jQuery UI interactions and effects for Shiny")
(description
@@ -15385,8 +14968,7 @@ identifying outliers.")
(base32 "154glks7rsjkza0sfi1kj7wj727py9sl1ba6sswflwmwc9n226q6"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)))
+ (list r-rcpp r-rcpparmadillo))
(home-page "http://www.perossi.org/home/bsm-1")
(synopsis "Bayesian inference for marketing/micro-econometrics")
(description
@@ -15443,7 +15025,7 @@ tensors.")
"12h2y46xcfldhjdmm960swgn9b23zvkj5vg2bi42s9qxwgi02d63"))))
(properties `((upstream-name . "rARPACK")))
(build-system r-build-system)
- (propagated-inputs `(("r-rspectra" ,r-rspectra)))
+ (propagated-inputs (list r-rspectra))
(home-page "https://github.com/yixuan/rARPACK")
(synopsis "Solvers for large scale eigenvalue and SVD problems")
(description
@@ -15467,12 +15049,9 @@ users of rARPACK are advised to switch to the RSpectra package.")
"05pji62pzgfk9dyiybmr16q0h6mdzsmvyzxdni3hn0dvl4a7mr5m"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-bayesm" ,r-bayesm)
- ("r-mass" ,r-mass)
- ("r-robustbase" ,r-robustbase)
- ("r-tensora" ,r-tensora)))
+ (list r-bayesm r-mass r-robustbase r-tensora))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "http://www.stat.boogaart.de/compositions")
(synopsis "Compositional data analysis")
(description
@@ -15494,8 +15073,7 @@ numbers (e.g. concentrations).")
"0hiw5smk6kgk0gb9840kcqkhkybl7n30s77xhjc395x09izbgix1"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-quantreg" ,r-quantreg)
- ("r-sparsem" ,r-sparsem)))
+ (list r-quantreg r-sparsem))
(home-page "https://cran.r-project.org/web/packages/cobs")
(synopsis "Constrained B-Splines (sparse matrix based)")
(description
@@ -15517,8 +15095,7 @@ splines via linear programming and sparse matrices.")
(properties `((upstream-name . "DrImpute")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)))
+ (list r-rcpp r-rcpparmadillo))
(home-page "https://github.com/ikwak2/DrImpute")
(synopsis "Imputing dropout events in single-cell RNA-Seq data")
(description
@@ -15540,7 +15117,7 @@ such software by imputing dropout events.")
(base32 "0m41n7zf7m0mh1w9ql70wqnzsf2f013ql699im7zmp6fdggb8qxm"))))
(properties `((upstream-name . "gamlss.dist")))
(build-system r-build-system)
- (propagated-inputs `(("r-mass" ,r-mass)))
+ (propagated-inputs (list r-mass))
(home-page "http://www.gamlss.org/")
(synopsis "Distributions for Generalized Additive Models for location scale and shape")
(description
@@ -15569,12 +15146,9 @@ transformation, respectively.")
"1zzq356dvd8ciajy6r5n4ybgx9xk7ydwv25j86xlcsqznkxdkkf2"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-digest" ,r-digest)
- ("r-htmltools" ,r-htmltools)
- ("r-jsonlite" ,r-jsonlite)
- ("r-shiny" ,r-shiny)))
+ (list r-digest r-htmltools r-jsonlite r-shiny))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://deanattali.com/shinyjs")
(synopsis "Improve the user experience of your Shiny apps")
(description
@@ -15622,13 +15196,13 @@ to easily call your own custom JavaScript functions from R.")
(map car mapping)
(map cdr mapping)))))))))
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-htmltools" ,r-htmltools)
- ("r-htmlwidgets" ,r-htmlwidgets)
- ("r-jsonlite" ,r-jsonlite)
- ("r-miniui" ,r-miniui)
- ("r-shiny" ,r-shiny)
- ("r-shinyjs" ,r-shinyjs)))
+ (list r-ggplot2
+ r-htmltools
+ r-htmlwidgets
+ r-jsonlite
+ r-miniui
+ r-shiny
+ r-shinyjs))
(native-inputs
`(("esbuild" ,esbuild)
("js-jquery"
@@ -15670,16 +15244,16 @@ select colors to use in your R code.")
(properties `((upstream-name . "ggExtra")))
(build-system r-build-system)
(propagated-inputs
- `(("r-colourpicker" ,r-colourpicker)
- ("r-ggplot2" ,r-ggplot2)
- ("r-gtable" ,r-gtable)
- ("r-miniui" ,r-miniui)
- ("r-r6" ,r-r6)
- ("r-scales" ,r-scales)
- ("r-shiny" ,r-shiny)
- ("r-shinyjs" ,r-shinyjs)))
+ (list r-colourpicker
+ r-ggplot2
+ r-gtable
+ r-miniui
+ r-r6
+ r-scales
+ r-shiny
+ r-shinyjs))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/daattali/ggExtra")
(synopsis "Marginal histograms for ggplot2 and other enhancements")
(description
@@ -15701,7 +15275,7 @@ marginal histograms/boxplots/density plots to ggplot2 scatterplots.")
"18ym2pdql5vzngc7q5gn66d153hrfrnd8ilv8yh6vd7j7sx7vjql"))))
(properties `((upstream-name . "minpack.lm")))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/minpack.lm")
(synopsis "Levenberg-Marquardt Nonlinear Least-Squares algorithm")
(description
@@ -15745,9 +15319,9 @@ them (Anscombe-Glynn, D'Agostino, Bonett-Seier).")
"1wm83m3cqd6llxb9p2jwim0wb81v84pgdmgcznygzaaq6kbn3n84"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-mclust" ,r-mclust)))
+ (list r-mclust))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/msir")
(synopsis "Model-based sliced inverse regression")
(description
@@ -15767,7 +15341,7 @@ mixture modeling of inverse regression.")
(base32
"05jzrjqxzbcf6z245hlk7sjxiszv9paadaaimvcx5y5qgi87vhq7"))))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://github.com/brentonk/pbivnorm")
(synopsis "Vectorized bivariate normal CDF")
(description
@@ -15788,10 +15362,7 @@ probabilities from a standard bivariate normal CDF.")
"12hhbwxaiprs9bmclwhhdpv42h4mrl4gj92zq3wk8rb883mw816l"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)
- ("r-mnormt" ,r-mnormt)
- ("r-numderiv" ,r-numderiv)
- ("r-pbivnorm" ,r-pbivnorm)))
+ (list r-mass r-mnormt r-numderiv r-pbivnorm))
(home-page "https://lavaan.ugent.be")
(synopsis "Latent variable analysis")
(description
@@ -15813,12 +15384,9 @@ latent growth curve models.")
"1ddaqwx8i3ygwvxf11mc8xhgk4nkvnail99nr5szq8i168752zq2"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-compquadform" ,r-compquadform)
- ("r-lavaan" ,r-lavaan)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-sandwich" ,r-sandwich)))
+ (list r-compquadform r-lavaan r-mvtnorm r-sandwich))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/nonnest2/")
(synopsis "Tests of non-nested models")
(description
@@ -15842,9 +15410,7 @@ obtain confidence intervals associated with AIC and BIC.")
"1zcrwa93mc27qj3g4ayc2k895r6g8q0g6qb2azmvj7wqk750va7a"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-survival" ,r-survival)))
+ (list r-rcpp r-rcpparmadillo r-survival))
(home-page "https://cran.r-project.org/web/packages/penalized/")
(synopsis "Penalized estimation in GLMs and in the Cox model")
(description
@@ -15870,7 +15436,7 @@ parameters.")
"0scyfjn4ilsvha3x41c3b8bcfi31hlhwm77wn2a8hj5dsvnnmzig"))))
(properties `((upstream-name . "ZIM")))
(build-system r-build-system)
- (propagated-inputs `(("r-mass" ,r-mass)))
+ (propagated-inputs (list r-mass))
(home-page "https://github.com/biostatstudio/ZIM")
(synopsis "Zero-inflated models (ZIM) for count time series with excess zeros")
(description
@@ -15940,10 +15506,9 @@ graphs.")
(properties `((upstream-name . "pbdZMQ")))
(build-system r-build-system)
(inputs
- `(("zeromq" ,zeromq)
- ("zlib" ,zlib)))
+ (list zeromq zlib))
(native-inputs
- `(("pkg-config" ,pkg-config)))
+ (list pkg-config))
(home-page "https://pbdr.org/")
(synopsis "R interface to ZeroMQ")
(description
@@ -15967,10 +15532,7 @@ compatible with @code{rzmq} are also provided.")
"0qimllv9pn8wsl550bjkp5dkknbmr69j85mrwfbbq75m2ga466sk"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-base64enc" ,r-base64enc)
- ("r-htmltools" ,r-htmltools)
- ("r-jsonlite" ,r-jsonlite)
- ("r-pillar" ,r-pillar)))
+ (list r-base64enc r-htmltools r-jsonlite r-pillar))
(home-page "https://cran.r-project.org/web/packages/repr/")
(synopsis "Serializable representations")
(description
@@ -15992,7 +15554,7 @@ several formats and MIME types.")
(properties `((upstream-name . "IRdisplay")))
(build-system r-build-system)
(propagated-inputs
- `(("r-repr" ,r-repr)))
+ (list r-repr))
(home-page "https://cran.r-project.org/web/packages/IRdisplay/")
(synopsis "Jupyter display machinery")
(description
@@ -16033,18 +15595,18 @@ running IRkernel session.")
(string-append "[\"" (which "R") "\",")))
#t))))))
(inputs
- `(("jupyter" ,jupyter)))
- (propagated-inputs
- `(("r-crayon" ,r-crayon)
- ("r-digest" ,r-digest)
- ("r-evaluate" ,r-evaluate)
- ("r-irdisplay" ,r-irdisplay)
- ("r-jsonlite" ,r-jsonlite)
- ;; sets R_LIBS_SITE, so R can actually find this package (IRkernel)
- ("r-minimal" ,r-minimal)
- ("r-pbdzmq" ,r-pbdzmq)
- ("r-repr" ,r-repr)
- ("r-uuid" ,r-uuid)))
+ (list jupyter))
+ (propagated-inputs
+ (list r-crayon
+ r-digest
+ r-evaluate
+ r-irdisplay
+ r-jsonlite
+ ;; sets R_LIBS_SITE, so R can actually find this package (IRkernel)
+ r-minimal
+ r-pbdzmq
+ r-repr
+ r-uuid))
(home-page "https://cran.r-project.org/web/packages/IRkernel/")
(synopsis "Native R kernel for Jupyter")
(description
@@ -16066,8 +15628,7 @@ network.")
"0s8kd8krqk4kwv2zqxpsfy3w8qdwf5naf4b5l383vidq9sil0qb2"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-gdata" ,r-gdata)
- ("r-mass" ,r-mass)))
+ (list r-gdata r-mass))
(home-page "https://cran.r-project.org/web/packages/gmodels/")
(synopsis "Various R programming tools for model fitting")
(description
@@ -16087,8 +15648,7 @@ network.")
"0lzf2jqm56i74wif6x5sw3j0w2qc4sni49zq2fgbl89b7lwkvchj"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)
- ("r-rcpp" ,r-rcpp)))
+ (list r-matrix r-rcpp))
(home-page "https://cran.r-project.org/web/packages/apcluster/")
(synopsis "Affinity propagation clustering")
(description
@@ -16112,16 +15672,16 @@ plotting functions are available for analyzing clustering results.")
"1lzdlw0mw06rymyjzwf4i8rx1z6zxpwxxqfsc9ggqlnhq6bfhy93"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-broom" ,r-broom)
- ("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-rcpp" ,r-rcpp)
- ("r-readr" ,r-readr)
- ("r-rlang" ,r-rlang)
- ("r-stringr" ,r-stringr)
- ("r-tibble" ,r-tibble)))
+ (list r-broom
+ r-dplyr
+ r-ggplot2
+ r-rcpp
+ r-readr
+ r-rlang
+ r-stringr
+ r-tibble))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/rnabioco/valr")
(synopsis "Genome interval arithmetic in R")
(description
@@ -16143,7 +15703,7 @@ R, enabling interactive analysis and visualization of genome-scale data.")
"1fzpz8vhghw8ygwg6rsvfy3783pqk7ch029i5851lwypkplvz77y"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-tibble" ,r-tibble)))
+ (list r-tibble))
(home-page "https://github.com/r-lib/rematch2")
(synopsis "Tidy output from regular expression matching")
(description
@@ -16164,9 +15724,7 @@ return the match results in tidy data frames.")
"19savjzj44b7ifdxcp02ynj22z4n4ikq2aipc74ljzy3yykmqmjn"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ape" ,r-ape)
- ("r-nlme" ,r-nlme)
- ("r-vegan" ,r-vegan)))
+ (list r-ape r-nlme r-vegan))
(home-page "https://cran.r-project.org/web/packages/picante/")
(synopsis "Integrating phylogenies and ecology")
(description
@@ -16193,10 +15751,7 @@ al. (2010).")
"176z2q69p24i29a8sh19xxn2zl3h1z2ixdssr5i6m4yvkvdrvv3b"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-checkmate" ,r-checkmate)
- ("r-nnet" ,r-nnet)
- ("r-purrr" ,r-purrr)
- ("r-r6" ,r-r6)))
+ (list r-checkmate r-nnet r-purrr r-r6))
(home-page "https://markusdumke.github.io/reinforcelearn")
(synopsis "Reinforcement learning")
(description
@@ -16219,16 +15774,16 @@ can be used with function approximation, eligibility traces (Singh & Sutton,
"1y3ljidhqdakxlya2npj2w0az820g8kw6gl1cfm4f0cxvzgd1ly4"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-gtable" ,r-gtable)
- ("r-knitr" ,r-knitr)
- ("r-lattice" ,r-lattice)
- ("r-plyr" ,r-plyr)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)))
+ (list r-ggplot2
+ r-gridextra
+ r-gtable
+ r-knitr
+ r-lattice
+ r-plyr
+ r-rlang
+ r-scales))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/stefanedwards/lemon")
(synopsis "Freshen up your ggplot2 plots")
(description
@@ -16249,8 +15804,7 @@ extensions.")
(base32 "1qiyfkpsbzjr9xsq5kqq6rlqpndngkn2irdfh3gyi45h6hn118j4"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-qtl" ,r-qtl)))
+ (list r-ggplot2 r-qtl))
(home-page "https://cran.r-project.org/web/packages/wgaim")
(synopsis "Whole genome average interval mapping for QTL detection")
(description
@@ -16271,16 +15825,16 @@ whole genome approach to detecting significant QTL in linkage maps.")
"0zpqvyjgwyqawxm8qrhcv8zq2b3yxgcqkkc87br29yrl7sjb8h6j"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-r-utils" ,r-r-utils)
- ("r-testthat" ,r-testthat)
- ("r-venndiagram" ,r-venndiagram)
- ("r-yaml" ,r-yaml)
- ("bedops" ,bedops)
- ("bedtools" ,bedtools)
- ("htslib" ,htslib))) ; for tabix
+ (list r-data-table
+ r-r-utils
+ r-testthat
+ r-venndiagram
+ r-yaml
+ bedops
+ bedtools
+ htslib)) ; for tabix
(native-inputs
- `(("r-knitr" ,r-knitr))) ; for vignettes
+ (list r-knitr)) ; for vignettes
(home-page "https://cran.r-project.org/web/packages/bedr")
(synopsis "Genomic region processing")
(description
@@ -16325,9 +15879,7 @@ customizable sets, and intervals.")
"1qqy4df28wy4q0g572azrj171jlhvrnzbh7x0wr2g7v6gr20y0ns"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-gmp" ,r-gmp)
- ("r-polynom" ,r-polynom)
- ("r-sets" ,r-sets)))
+ (list r-gmp r-polynom r-sets))
(home-page "https://cran.r-project.org/web/packages/partitions")
(synopsis "Additive partitions of integers")
(description
@@ -16373,9 +15925,7 @@ methods.")
"1i7m4vfslsix98dwx4jlrsldm7fhhfp25gr7aapcxqxms7ryaby6"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-brobdingnag" ,r-brobdingnag)
- ("r-partitions" ,r-partitions)
- ("r-polynom" ,r-polynom)))
+ (list r-brobdingnag r-partitions r-polynom))
(home-page "https://github.com/RobinHankin/untb.git")
(synopsis "Ecological drift under the UNTB")
(description
@@ -16416,8 +15966,7 @@ breakpoints in a genomic sequence alignment.")
(properties `((upstream-name . "SNPmaxsel")))
(build-system r-build-system)
(propagated-inputs
- `(("r-combinat" ,r-combinat)
- ("r-mvtnorm" ,r-mvtnorm)))
+ (list r-combinat r-mvtnorm))
(home-page "https://cran.r-project.org/web/packages/SNPmaxsel/index.html")
(synopsis "Maximally selected statistics for SNP data")
(description
@@ -16439,8 +15988,7 @@ data.")
(properties `((upstream-name . "ACSNMineR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)))
+ (list r-ggplot2 r-gridextra))
(home-page "https://cran.r-project.org/web/packages/ACSNMineR")
(synopsis "Gene enrichment analysis")
(description
@@ -16465,10 +16013,9 @@ barplots or heatmaps.")
"1xz9spln6s9mcwpgcv1m4jymn4gnl1bb6vh90bphqcn0vvlk8jsq"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ade4" ,r-ade4)
- ("r-segmented" ,r-segmented)))
+ (list r-ade4 r-segmented))
(inputs
- `(("zlib" ,zlib)))
+ (list zlib))
(home-page "http://seqinr.r-forge.r-project.org/")
(synopsis "Biological sequences retrieval and analysis")
(description
@@ -16490,11 +16037,11 @@ utilities for sequence data management under the ACNUC system.")
"1ss0f15h4yqzk488ilsa5d2ibrj3wzwplx4160mn600i8ciy02xr"))))
(build-system r-build-system)
(inputs
- `(("udunits" ,udunits)))
+ (list udunits))
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)))
+ (list r-rcpp))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/r-quantities/units/")
(synopsis "Measurement Units for R Vectors")
(description
@@ -16519,7 +16066,7 @@ classes.")
(properties `((upstream-name . "udunits2")))
(build-system r-build-system)
(inputs
- `(("udunits" ,udunits)))
+ (list udunits))
(home-page "https://cran.r-project.org/package=udunits2")
(synopsis "Udunits-2 bindings for R")
(description
@@ -16540,12 +16087,9 @@ classes.")
(properties `((upstream-name . "classInt")))
(build-system r-build-system)
(propagated-inputs
- `(("r-class" ,r-class)
- ("r-e1071" ,r-e1071)
- ("r-kernsmooth" ,r-kernsmooth)))
+ (list r-class r-e1071 r-kernsmooth))
(native-inputs
- `(("gfortran" ,gfortran)
- ("r-knitr" ,r-knitr)))
+ (list gfortran r-knitr))
(home-page "https://github.com/r-spatial/classInt/")
(synopsis "Choose univariate class intervals")
(description
@@ -16567,8 +16111,7 @@ univariate class intervals for mapping or other graphics purposes.")
(properties `((upstream-name . "spData")))
(build-system r-build-system)
(propagated-inputs
- `(("r-raster" ,r-raster)
- ("r-sp" ,r-sp)))
+ (list r-raster r-sp))
(home-page "https://github.com/Nowosad/spData")
(synopsis "Datasets for spatial analysis")
(description
@@ -16618,7 +16161,7 @@ sampling.")
(base32
"1igq0l2knsbhizncgydcsidgkvvlwwlkrifbcdyhnzk0bhrdixkd"))))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/deldir")
(synopsis "Delaunay triangulation and Dirichlet (Voronoi) tessellation")
(description
@@ -16644,7 +16187,7 @@ tessellation.")
(properties `((upstream-name . "wk")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cpp11" ,r-cpp11)))
+ (list r-cpp11))
(home-page "https://paleolimbot.github.io/wk/")
(synopsis "Lightweight well-known geometry parsing")
(description
@@ -16670,12 +16213,11 @@ high-performance functions are provided here.")
(properties `((upstream-name . "s2")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-wk" ,r-wk)))
+ (list r-rcpp r-wk))
(inputs
- `(("openssl" ,openssl)))
+ (list openssl))
(native-inputs
- `(("pkg-config" ,pkg-config)))
+ (list pkg-config))
(home-page "https://r-spatial.github.io/s2/")
(synopsis "Spherical geometry operators using the S2 geometry library")
(description
@@ -16700,21 +16242,16 @@ information about geometries.")
"0dxln3ikqmwczz0ri63xwj05v09hkpljw2qvma6n03nzczyg2713"))))
(build-system r-build-system)
(inputs
- `(("gdal" ,gdal)
- ("geos" ,geos)
- ("proj" ,proj)
- ("sqlite" ,sqlite)
- ("zlib" ,zlib)))
+ (list gdal geos proj sqlite zlib))
(propagated-inputs
- `(("r-classint" ,r-classint)
- ("r-dbi" ,r-dbi)
- ("r-magrittr" ,r-magrittr)
- ("r-rcpp" ,r-rcpp)
- ("r-s2" ,r-s2)
- ("r-units" ,r-units)))
+ (list r-classint
+ r-dbi
+ r-magrittr
+ r-rcpp
+ r-s2
+ r-units))
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("r-knitr" ,r-knitr)))
+ (list pkg-config r-knitr))
(home-page "https://github.com/r-spatial/sf/")
(synopsis "Simple features for R")
(description
@@ -16750,23 +16287,23 @@ datum transformations.")
"inst/doc/nb_sf.Rmd")))))
(build-system r-build-system)
(propagated-inputs
- `(("r-boot" ,r-boot)
- ("r-coda" ,r-coda)
- ("r-deldir" ,r-deldir)
- ("r-e1071" ,r-e1071)
- ("r-expm" ,r-expm)
- ("r-gmodels" ,r-gmodels)
- ("r-learnbayes" ,r-learnbayes)
- ("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-nlme" ,r-nlme)
- ("r-s2" ,r-s2)
- ("r-sf" ,r-sf)
- ("r-sp" ,r-sp)
- ("r-spdata" ,r-spdata)
- ("r-units" ,r-units)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-boot
+ r-coda
+ r-deldir
+ r-e1071
+ r-expm
+ r-gmodels
+ r-learnbayes
+ r-mass
+ r-matrix
+ r-nlme
+ r-s2
+ r-sf
+ r-sp
+ r-spdata
+ r-units))
+ (native-inputs
+ (list r-knitr))
(home-page "https://github.com/r-spatial/spdep/")
(synopsis "Spatial dependence: weighting schemes, statistics and models")
(description
@@ -16790,17 +16327,17 @@ spanning tree.")
"1wjp31634n6z6wglf4z3ydrhhn5jmpwwckmp3n2b0v5f3p2fivp4"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ade4" ,r-ade4)
- ("r-ape" ,r-ape)
- ("r-boot" ,r-boot)
- ("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-igraph" ,r-igraph)
- ("r-mass" ,r-mass)
- ("r-reshape2" ,r-reshape2)
- ("r-seqinr" ,r-seqinr)
- ("r-shiny" ,r-shiny)
- ("r-vegan" ,r-vegan)))
+ (list r-ade4
+ r-ape
+ r-boot
+ r-dplyr
+ r-ggplot2
+ r-igraph
+ r-mass
+ r-reshape2
+ r-seqinr
+ r-shiny
+ r-vegan))
(home-page "https://github.com/thibautjombart/adegenet")
(synopsis "Exploratory analysis of genetic and genomic data")
(description
@@ -16827,8 +16364,7 @@ also provided to illustrate various methods.")
(base32 "0ykx84p7c8cad5d1mj8cm1d5cz2paacdjx4ll4qzmq827lcyycz1"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-adegenet" ,r-adegenet)
- ("r-ape" ,r-ape)))
+ (list r-adegenet r-ape))
(home-page "http://ape-package.ird.fr/pegas.html")
(synopsis "Population and evolutionary genetics analysis system")
(description
@@ -16853,10 +16389,7 @@ minimum spanning tree and network, and median-joining networks.")
"0rdkhfgyr97r2d1kd9g8ipb2pn563qxm1y4m9z678q0kqan2ddl0"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ade4" ,r-ade4)
- ("r-adegenet" ,r-adegenet)
- ("r-gtools" ,r-gtools)
- ("r-pegas" ,r-pegas)))
+ (list r-ade4 r-adegenet r-gtools r-pegas))
(home-page "https://cran.r-project.org/web/packages/rmetasim")
(synopsis "Individual-based population genetic simulation environment")
(description
@@ -16880,11 +16413,7 @@ genetics of complex population dynamics.")
"0lljxvz7nc6y2z303icphar2niir0i407w5cyhy2pwspd9gwkwpy"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-combinat" ,r-combinat)
- ("r-gdata" ,r-gdata)
- ("r-gtools" ,r-gtools)
- ("r-mass" ,r-mass)
- ("r-mvtnorm" ,r-mvtnorm)))
+ (list r-combinat r-gdata r-gtools r-mass r-mvtnorm))
(home-page "https://cran.r-project.org/web/packages/genetics/")
(synopsis "Population genetics")
(description
@@ -16910,7 +16439,7 @@ and testing for linkage disequilibrium, ...")
"16apsqvkah5l0d5qcwp3lq2jspkb6n62wzr0wskmj84jblx483vv"))))
(properties `((upstream-name . "snp.plotter")))
(build-system r-build-system)
- (propagated-inputs `(("r-genetics" ,r-genetics)))
+ (propagated-inputs (list r-genetics))
(home-page "https://cran.r-project.org/web/packages/snp.plotter/")
(synopsis "Plot p-values using single SNP and/or haplotype data")
(description
@@ -16933,7 +16462,7 @@ either PDF/EPS files.")
(sha256
(base32 "0rhzf735hmbqfn2xbgcln4sqx7m9far72g5gq9mghgkw016kqglm"))))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/polspline/")
(synopsis "Polynomial spline routines")
(description
@@ -16954,22 +16483,22 @@ lspec, polyclass, and polymars.")
(base32 "1di4xvsx0rwkr77nfqiysbg4qf699199xqil70i39d4zwfzqrm8h"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-cluster" ,r-cluster)
- ("r-digest" ,r-digest)
- ("r-ggplot2" ,r-ggplot2)
- ("r-hmisc" ,r-hmisc)
- ("r-htmltable" ,r-htmltable)
- ("r-htmltools" ,r-htmltools)
- ("r-lattice" ,r-lattice)
- ("r-mass" ,r-mass)
- ("r-multcomp" ,r-multcomp)
- ("r-nlme" ,r-nlme)
- ("r-polspline" ,r-polspline)
- ("r-quantreg" ,r-quantreg)
- ("r-rpart" ,r-rpart)
- ("r-sparsem" ,r-sparsem)
- ("r-survival" ,r-survival)))
- (native-inputs `(("gfortran" ,gfortran)))
+ (list r-cluster
+ r-digest
+ r-ggplot2
+ r-hmisc
+ r-htmltable
+ r-htmltools
+ r-lattice
+ r-mass
+ r-multcomp
+ r-nlme
+ r-polspline
+ r-quantreg
+ r-rpart
+ r-sparsem
+ r-survival))
+ (native-inputs (list gfortran))
(home-page "http://biostat.mc.vanderbilt.edu/rms")
(synopsis "Regression modeling strategies")
(description
@@ -17001,8 +16530,8 @@ generalized linear models, and quantile regression.")
"0qvs3ld28djnjnggdhqjwq8sbv8zz322qahlvf7dnx35yqf6xkms"))))
(properties `((upstream-name . "arsenal")))
(build-system r-build-system)
- (propagated-inputs `(("r-knitr" ,r-knitr)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (propagated-inputs (list r-knitr))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/mayoverse/arsenal")
(synopsis "Functions for large-scale statistical summaries")
(description
@@ -17041,10 +16570,9 @@ include
(properties `((upstream-name . "haplo.stats")))
(build-system r-build-system)
(propagated-inputs
- `(("r-arsenal" ,r-arsenal)
- ("r-rms" ,r-rms)))
+ (list r-arsenal r-rms))
(native-inputs
- `(("r-r-rsp" ,r-r-rsp))) ; for vignettes
+ (list r-r-rsp)) ; for vignettes
(home-page "https://www.mayo.edu/research/labs/statistical-genetics-genetic-epidemiology/software")
(synopsis "Analysis of haplotypes when linkage phase is ambiguous")
(description
@@ -17068,7 +16596,7 @@ examples in the vignette.")
(base32
"1sbzpi9z94f010lw2y1gmifjrvpmiqs4m26za7vr1xz72azrqvs9"))))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "http://famprevmed.ucsd.edu/faculty/cberry/bqtl/")
(synopsis "Bayesian QTL mapping toolkit")
(description
@@ -17111,11 +16639,7 @@ the same pedigree.")
"0s6wlkggkm3qndwyvw72xv1n0mcjb7ss3ajbq2ll6rv30splq0db"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ibdreg" ,r-ibdreg)
- ("r-mgcv" ,r-mgcv)
- ("r-nlme" ,r-nlme)
- ("r-qtl" ,r-qtl)
- ("r-wgaim" ,r-wgaim)))
+ (list r-ibdreg r-mgcv r-nlme r-qtl r-wgaim))
(home-page "https://cran.r-project.org/web/packages/dlmap/")
(synopsis "Detection localization mapping for QTL")
(description
@@ -17184,8 +16708,7 @@ tests for extended marker haplotypes, as in Clayton, D. and Jones, H. (1999)
(properties `((upstream-name . "SPARQL")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcurl" ,r-rcurl)
- ("r-xml" ,r-xml)))
+ (list r-rcurl r-xml))
(home-page "https://cran.r-project.org/web/packages/SPARQL")
(synopsis "SPARQL client for R")
(description "This package provides an interface to use SPARQL to pose
@@ -17206,14 +16729,14 @@ SELECT or UPDATE queries to an end-point.")
"1qqvvfbpbd6sin8vpvr3zzlhlyx1i6b98yp77xj5zl220nid5slb"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-htmltools" ,r-htmltools)
- ("r-jquerylib" ,r-jquerylib)
- ("r-knitr" ,r-knitr)
- ("r-rmarkdown" ,r-rmarkdown)
- ("r-tinytex" ,r-tinytex)
- ("r-xfun" ,r-xfun)
- ("r-yaml" ,r-yaml)
- ("pandoc" ,pandoc)))
+ (list r-htmltools
+ r-jquerylib
+ r-knitr
+ r-rmarkdown
+ r-tinytex
+ r-xfun
+ r-yaml
+ pandoc))
;; We cannot add knitr because this package depends on xfun, which is an
;; input to knitr.
#;
@@ -17238,9 +16761,9 @@ authoring books and technical documents with R Markdown.")
"1rqz0y4r94y3mwbb9kyz97cjqpnprka96qbncvbnbmgg2d630kij"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-getopt" ,r-getopt)))
+ (list r-getopt))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/trevorld/optparse")
(synopsis "Command line option parser")
(description
@@ -17283,12 +16806,9 @@ and a QP solver.")
"1p4vlna185sa3b5xjbysiqxcj9aa5s7dmxy41hg79vlqdivf874r"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ade4" ,r-ade4)
- ("r-adegenet" ,r-adegenet)
- ("r-gaston" ,r-gaston)
- ("r-gtools" ,r-gtools)))
+ (list r-ade4 r-adegenet r-gaston r-gtools))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/hierfstat/")
(synopsis "Estimation and tests of hierarchical F-statistics")
(description
@@ -17334,8 +16854,7 @@ handle missing genotypes at some SNPs.")
"11xis4vzn2ga8ml9xrgfgqzccvwbnabq35aidzdvpnvciybsanvz"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-lpsolve" ,r-lpsolve)
- ("r-mass" ,r-mass)))
+ (list r-lpsolve r-mass))
(home-page "https://cran.r-project.org/web/packages/sampling/")
(synopsis "Survey sampling")
(description
@@ -17428,7 +16947,7 @@ and accessing fields.")
(properties `((upstream-name . "svMisc")))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/SciViews/svMisc")
(synopsis "Miscellaneous functions for SciViews")
(description
@@ -17451,7 +16970,7 @@ path for temporary variables you do not want to @code{save()} or
"13w4sb4pvgciwr8wsz785dafj2k2kpx7znz46r5d32wx88vkycp4"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)))
+ (list r-rcpp))
(home-page "https://cran.r-project.org/web/packages/xyz/")
(synopsis "Algorithm for fast interaction search in high-dimensional data")
(description
@@ -17518,8 +17037,7 @@ interaction search in high-dimensional data.")
"0b9k2n9sk23bh45hjgnkxpjyvpdrz1hx7kmxvmb4nhlhm1wpsv9g"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-extrafontdb" ,r-extrafontdb)
- ("r-rttf2pt1" ,r-rttf2pt1)))
+ (list r-extrafontdb r-rttf2pt1))
(home-page "https://github.com/wch/extrafont")
(synopsis "Tools for using fonts in R")
(description
@@ -17551,9 +17069,7 @@ The extrafont package makes both of these things easier.")
"1z2y0ihn68ppay7xkglhw7djki5654g6z4bbpyy41if57z9q554f"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-extrafont" ,r-extrafont)
- ("r-ggplot2" ,r-ggplot2)
- ("r-hmisc" ,r-hmisc)))
+ (list r-extrafont r-ggplot2 r-hmisc))
(home-page "https://cran.r-project.org/web/packages/xkcd/")
(synopsis "Plot ggplot2 graphics in the XKCD style")
(description
@@ -17575,10 +17091,9 @@ the XKCD web comic.")
(properties `((upstream-name . "babelgene")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-rlang" ,r-rlang)))
+ (list r-dplyr r-rlang))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page
"https://igordot.github.io/babelgene/")
(synopsis "Gene orthologs for model organisms in a Tidy data format")
@@ -17605,14 +17120,14 @@ compiled by the HGNC Comparison of Orthology Predictions (HCOP).")
"103m52av68pkjfh8f81qh6j3cs1mj1lg831ciwybr34cax767jr1"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-babelgene" ,r-babelgene)
- ("r-dplyr" ,r-dplyr)
- ("r-magrittr" ,r-magrittr)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-tidyselect" ,r-tidyselect)))
+ (list r-babelgene
+ r-dplyr
+ r-magrittr
+ r-rlang
+ r-tibble
+ r-tidyselect))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/igordot/msigdbr")
(synopsis "MSigDB gene sets for multiple organisms")
(description
@@ -17707,11 +17222,9 @@ package.")
"12mk3fa8fdjxj7xxz21jkr7h91w5wdgwjqhszcz1qffwsgb773qp"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-gridgraphics" ,r-gridgraphics)
- ("r-yulab-utils" ,r-yulab-utils)))
+ (list r-ggplot2 r-gridgraphics r-yulab-utils))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/GuangchuangYu/ggplotify")
(synopsis "Convert plots to @code{grob} or @code{ggplot} object")
(description
@@ -17735,7 +17248,7 @@ converting them to @code{ggplot} objects.")
(base32
"1hqyz57gph02c9fdc07lxz113bbklif3g18sw8jan6pakhhdc7dz"))))
(build-system r-build-system)
- (propagated-inputs `(("r-rcpp" ,r-rcpp)))
+ (propagated-inputs (list r-rcpp))
(home-page "https://github.com/Ironholds/triebeard/")
(synopsis "Radix trees in Rcpp")
(description
@@ -17758,10 +17271,7 @@ packages with Rcpp.")
"17znizh4yabh2zs9mzyr0sl6p0pw49961i61br7cl1b7v9sza18q"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-farver" ,r-farver)
- ("r-magrittr" ,r-magrittr)
- ("r-rcpp" ,r-rcpp)
- ("r-rlang" ,r-rlang)))
+ (list r-farver r-magrittr r-rcpp r-rlang))
(home-page "https://github.com/thomasp85/tweenr")
(synopsis "Interpolate data for smooth animations")
(description
@@ -17784,7 +17294,7 @@ color.")
(base32
"0jyk4maqiblvj095jd59dr76kbniyli3v3xvy0a72ljszq6vrnkl"))))
(build-system r-build-system)
- (native-inputs `(("pkg-config" ,pkg-config)))
+ (native-inputs (list pkg-config))
(home-page "http://www.angusj.com/delphi/clipper.php")
(synopsis "Polygon clipping")
(description
@@ -17810,8 +17320,7 @@ self-intersections from polygon data.")
"04x3my655dd287cbsszbnf75q0swmjlxxrblcsay7a8n3df3a830"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-triebeard" ,r-triebeard)))
+ (list r-rcpp r-triebeard))
(home-page "https://github.com/Ironholds/urltools/")
(synopsis "Vectorized tools for URL handling and parsing")
(description
@@ -17836,17 +17345,17 @@ sets of URLs.")
"0bwzjbjl678xvc2ihm80dwn9pidwafqjdab3k299csys16s3na1a"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-gtable" ,r-gtable)
- ("r-mass" ,r-mass)
- ("r-polyclip" ,r-polyclip)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)
- ("r-tidyselect" ,r-tidyselect)
- ("r-tweenr" ,r-tweenr)
- ("r-withr" ,r-withr)))
+ (list r-ggplot2
+ r-gtable
+ r-mass
+ r-polyclip
+ r-rcpp
+ r-rcppeigen
+ r-rlang
+ r-scales
+ r-tidyselect
+ r-tweenr
+ r-withr))
(home-page "https://ggforce.data-imaginist.com")
(synopsis "Accelerating ggplot2")
(description
@@ -17869,19 +17378,19 @@ that fills this gap.")
"16japbndid34shqg8n0bmjrxn84xmhrylvz832zclcllm6i93fn1"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-plyr" ,r-plyr)
- ("r-progress" ,r-progress)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)
- ("r-urltools" ,r-urltools)
- ("r-xml2" ,r-xml2)))
+ (list r-dplyr
+ r-httr
+ r-jsonlite
+ r-plyr
+ r-progress
+ r-purrr
+ r-rlang
+ r-tibble
+ r-tidyr
+ r-urltools
+ r-xml2))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/ropensci/europepmc/")
(synopsis "R Interface to the Europe PubMed Central RESTful Web Service")
(description
@@ -17909,23 +17418,23 @@ databases, including ENA, PDB or ChEMBL are also accessible.")
"0m4n8iw2b9jk8hcy5blg5w59zsqcpsbv27wbw598dvljpafx8sp3"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-digest" ,r-digest)
- ("r-dplyr" ,r-dplyr)
- ("r-ggforce" ,r-ggforce)
- ("r-ggplot2" ,r-ggplot2)
- ("r-ggrepel" ,r-ggrepel)
- ("r-graphlayouts" ,r-graphlayouts)
- ("r-gtable" ,r-gtable)
- ("r-igraph" ,r-igraph)
- ("r-mass" ,r-mass)
- ("r-rcpp" ,r-rcpp)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)
- ("r-tidygraph" ,r-tidygraph)
- ("r-viridis" ,r-viridis)
- ("r-withr" ,r-withr)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-digest
+ r-dplyr
+ r-ggforce
+ r-ggplot2
+ r-ggrepel
+ r-graphlayouts
+ r-gtable
+ r-igraph
+ r-mass
+ r-rcpp
+ r-rlang
+ r-scales
+ r-tidygraph
+ r-viridis
+ r-withr))
+ (native-inputs
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/ggraph/")
(synopsis "Implementation of grammar of graphics for graphs and networks")
(description
@@ -17950,10 +17459,7 @@ layer by layer.")
(properties `((upstream-name . "gkmSVM")))
(build-system r-build-system)
(propagated-inputs
- `(("r-kernlab" ,r-kernlab)
- ("r-rcpp" ,r-rcpp)
- ("r-rocr" ,r-rocr)
- ("r-seqinr" ,r-seqinr)))
+ (list r-kernlab r-rcpp r-rocr r-seqinr))
(home-page "https://cran.r-project.org/web/packages/gkmSVM")
(synopsis "Gapped-kmer support vector machine")
(description
@@ -17976,7 +17482,7 @@ kernels, including: gkmSVM, kmer-SVM, mismatch kernel and wildcard kernel.")
(properties `((upstream-name . "varSelRF")))
(build-system r-build-system)
(propagated-inputs
- `(("r-randomforest" ,r-randomforest)))
+ (list r-randomforest))
(home-page "https://www.ligarto.org/rdiaz/software/software")
(synopsis "Variable selection using random forests")
(description
@@ -18002,9 +17508,8 @@ proteomics applications).")
"0ycpgkk23y3zzkb42n2skcyl35ps1n7jmyzfj7pbxr3f6gr2grfh"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-cluster" ,r-cluster)
- ("r-survival" ,r-survival)))
- (native-inputs `(("gfortran" ,gfortran)))
+ (list r-cluster r-survival))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/pamr/")
(synopsis "Prediction Analysis for Microarrays")
(description
@@ -18044,13 +17549,13 @@ discriminant analysis for the purpose of classifying high dimensional data.")
"1qv512pd4x5vmx15y9nvqmabbbw14h75fmi1sjbcg5yl25z0cswy"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertthat" ,r-assertthat)
- ("r-dplyr" ,r-dplyr)
- ("r-htmltools" ,r-htmltools)
- ("r-jsonlite" ,r-jsonlite)
- ("r-magrittr" ,r-magrittr)
- ("r-rlang" ,r-rlang)
- ("r-shiny" ,r-shiny)))
+ (list r-assertthat
+ r-dplyr
+ r-htmltools
+ r-jsonlite
+ r-magrittr
+ r-rlang
+ r-shiny))
(home-page "https://ggvis.rstudio.com/")
(synopsis "Interactive grammar of graphics")
(description
@@ -18073,10 +17578,9 @@ graphics using Vega.")
"1h9f4ww9yc3nsvghgr2q7jjrlz29ibabxjbax1sk5wmqh2wy6pbx"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-lattice" ,r-lattice)
- ("r-survival" ,r-survival)))
+ (list r-lattice r-survival))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/gbm-developers/gbm")
(synopsis "Generalized boosted regression models")
(description
@@ -18129,10 +17633,7 @@ and Learning to Rank measures (LambdaMart).")
sources targets))))
#t)))))
(propagated-inputs
- `(("r-base64enc" ,r-base64enc)
- ("r-crosstalk" ,r-crosstalk)
- ("r-htmlwidgets" ,r-htmlwidgets)
- ("r-igraph" ,r-igraph)))
+ (list r-base64enc r-crosstalk r-htmlwidgets r-igraph))
(native-inputs
`(("uglifyjs" ,node-uglify-js)
("js-jquery"
@@ -18189,8 +17690,7 @@ repository.")
"0wijw8v0wmbfrda5564cmnp788qmlkk21yn5cp5qk8aprm9l1fnk"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-kernsmooth" ,r-kernsmooth)
- ("r-mass" ,r-mass)))
+ (list r-kernsmooth r-mass))
(home-page "http://mpm.r-forge.r-project.org")
(synopsis "Multivariate projection methods")
(description
@@ -18212,8 +17712,7 @@ analysis.")
"0g2mcp55lvvpx4kd3mn225mpbxqcq73wy5qx8b4lyf04iybgysg2"))))
(build-system r-build-system)
(inputs
- `(("libpng" ,libpng)
- ("zlib" ,zlib)))
+ (list libpng zlib))
(home-page "https://www.rforge.net/png/")
(synopsis "Read and write PNG images")
(description
@@ -18236,8 +17735,7 @@ in-memory raw vectors.")
"0hi9lz121ya1l2lbm7rqlxg6fs6bvxck396dngnidrhl5fvqb41b"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-reshape2" ,r-reshape2)))
+ (list r-ggplot2 r-reshape2))
(home-page "http://www.sthda.com/english/wiki/ggcorrplot")
(synopsis "Visualization of a correlation matrix using ggplot2")
(description
@@ -18261,9 +17759,8 @@ function for computing a matrix of correlation p-values.")
(properties `((upstream-name . "ggfun")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-rlang" ,r-rlang)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-ggplot2 r-rlang))
+ (native-inputs (list r-knitr))
(home-page "https://cran.r-project.org/package=ggfun")
(synopsis "Miscellaneous functions for ggplot2")
(description
@@ -18286,14 +17783,14 @@ each of the legends).")
(properties `((upstream-name . "gridtext")))
(build-system r-build-system)
(propagated-inputs
- `(("r-jpeg" ,r-jpeg)
- ("r-markdown" ,r-markdown)
- ("r-png" ,r-png)
- ("r-rcpp" ,r-rcpp)
- ("r-rcurl" ,r-rcurl)
- ("r-rlang" ,r-rlang)
- ("r-stringr" ,r-stringr)
- ("r-xml2" ,r-xml2)))
+ (list r-jpeg
+ r-markdown
+ r-png
+ r-rcpp
+ r-rcurl
+ r-rlang
+ r-stringr
+ r-xml2))
(home-page "https://wilkelab.org/gridtext/")
(synopsis "Improved text rendering support for Grid graphics")
(description
@@ -18317,11 +17814,8 @@ wrap.")
(properties `((upstream-name . "ggtext")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-gridtext" ,r-gridtext)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-ggplot2 r-gridtext r-rlang r-scales))
+ (native-inputs (list r-knitr))
(home-page "https://wilkelab.org/ggtext/")
(synopsis "Improved text rendering support for ggplot2")
(description
@@ -18401,12 +17895,12 @@ etc.). Text boxes with automatic word wrap are also supported.")
sources targets))))
#t)))))
(propagated-inputs
- `(("r-htmltools" ,r-htmltools)
- ("r-htmlwidgets" ,r-htmlwidgets)
- ("r-jsonlite" ,r-jsonlite)
- ("r-knitr" ,r-knitr)
- ("r-rmarkdown" ,r-rmarkdown)
- ("r-shiny" ,r-shiny)))
+ (list r-htmltools
+ r-htmlwidgets
+ r-jsonlite
+ r-knitr
+ r-rmarkdown
+ r-shiny))
(native-inputs
`(("uglifyjs" ,node-uglify-js)
("js-raphael"
@@ -18466,7 +17960,7 @@ of its components to the containing web page.")
(properties `((upstream-name . "preseqR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-polynom" ,r-polynom)))
+ (list r-polynom))
(home-page "https://cran.r-project.org/web/packages/preseqR/")
(synopsis "Predicting species accumulation curves")
(description
@@ -18534,7 +18028,7 @@ compatibility of dependent packages for some time.")
"1axggnsc27zzgr7snf41j3zd1vp3nfpmq4zj4d01axc709dyg40q"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-digest" ,r-digest)))
+ (list r-digest))
(home-page "https://github.com/wch/downloader")
(synopsis "Download files over HTTP and HTTPS")
(description
@@ -18558,12 +18052,12 @@ external dependencies. This package has is implemented purely in R.")
(properties `((upstream-name . "aplot")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggfun" ,r-ggfun)
- ("r-ggplot2" ,r-ggplot2)
- ("r-ggplotify" ,r-ggplotify)
- ("r-magrittr" ,r-magrittr)
- ("r-patchwork" ,r-patchwork)
- ("r-yulab-utils" ,r-yulab-utils)))
+ (list r-ggfun
+ r-ggplot2
+ r-ggplotify
+ r-magrittr
+ r-patchwork
+ r-yulab-utils))
(home-page "https://github.com/YuLab-SMU/aplot")
(synopsis "Decorate a ggplot with associated information")
(description
@@ -18588,7 +18082,7 @@ matched.")
(properties `((upstream-name . "ggnewscale")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)))
+ (list r-ggplot2))
(home-page "https://cran.r-project.org/package=ggnewscale")
(synopsis "Multiple fill and color scales in ggplot2")
(description
@@ -18610,7 +18104,7 @@ matched.")
`((upstream-name . "ggpointdensity")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)))
+ (list r-ggplot2))
(home-page "https://github.com/LKremer/ggpointdensity")
(synopsis "Cross between a 2D density plot and a scatter plot")
(description
@@ -18634,19 +18128,17 @@ colored by the number of neighboring points. This is useful to visualize the
(properties `((upstream-name . "arrow")))
(build-system r-build-system)
(inputs
- `(("apache-arrow" ,apache-arrow "lib")
- ("zlib" ,zlib)))
+ (list `(,apache-arrow "lib") zlib))
(propagated-inputs
- `(("r-assertthat" ,r-assertthat)
- ("r-bit64" ,r-bit64)
- ("r-purrr" ,r-purrr)
- ("r-r6" ,r-r6)
- ("r-rlang" ,r-rlang)
- ("r-tidyselect" ,r-tidyselect)
- ("r-vctrs" ,r-vctrs)))
+ (list r-assertthat
+ r-bit64
+ r-purrr
+ r-r6
+ r-rlang
+ r-tidyselect
+ r-vctrs))
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("r-knitr" ,r-knitr)))
+ (list pkg-config r-knitr))
(home-page "https://github.com/apache/arrow/")
(synopsis "R integration to Apache Arrow")
(description
@@ -18670,9 +18162,9 @@ library.")
"0m7bq8db3m5dhf01rw7xc7xy1ciq3m7dfgsl80p8cy4h8vqr3d06"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-lazyeval" ,r-lazyeval)))
+ (list r-lazyeval))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/kevinushey/rex")
(synopsis "Friendly regular expressions")
(description
@@ -18696,10 +18188,9 @@ regular expressions from human readable expressions")
(properties `((upstream-name . "mlapi")))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)
- ("r-r6" ,r-r6)))
+ (list r-matrix r-r6))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/package=mlapi")
(synopsis "Abstract classes for building scikit-learn like API")
(description
@@ -18723,7 +18214,7 @@ industry for machine learning tasks.")
(properties `((upstream-name . "float")))
(build-system r-build-system)
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://github.com/wrathematics/float")
(synopsis "32-bit floats")
(description
@@ -18750,13 +18241,13 @@ on, for a performance vs accuracy trade-off.")
(properties `((upstream-name . "rsparse")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-float" ,r-float)
- ("r-lgr" ,r-lgr)
- ("r-matrix" ,r-matrix)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-rhpcblasctl" ,r-rhpcblasctl)))
+ (list r-data-table
+ r-float
+ r-lgr
+ r-matrix
+ r-rcpp
+ r-rcpparmadillo
+ r-rhpcblasctl))
(home-page "https://github.com/rexyai/rsparse")
(synopsis "Statistical learning on sparse matrices")
(description
@@ -18782,17 +18273,17 @@ Row} (CSR) format.")
(properties `((upstream-name . "text2vec")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-digest" ,r-digest)
- ("r-lgr" ,r-lgr)
- ("r-matrix" ,r-matrix)
- ("r-mlapi" ,r-mlapi)
- ("r-r6" ,r-r6)
- ("r-rcpp" ,r-rcpp)
- ("r-rsparse" ,r-rsparse)
- ("r-stringi" ,r-stringi)))
+ (list r-data-table
+ r-digest
+ r-lgr
+ r-matrix
+ r-mlapi
+ r-r6
+ r-rcpp
+ r-rsparse
+ r-stringi))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "http://text2vec.org")
(synopsis "Text mining framework for R")
(description
@@ -18818,11 +18309,7 @@ multicore machines.")
(properties `((upstream-name . "MCMCpack")))
(build-system r-build-system)
(propagated-inputs
- `(("r-coda" ,r-coda)
- ("r-lattice" ,r-lattice)
- ("r-mass" ,r-mass)
- ("r-mcmc" ,r-mcmc)
- ("r-quantreg" ,r-quantreg)))
+ (list r-coda r-lattice r-mass r-mcmc r-quantreg))
(home-page "https://cran.r-project.org/package=MCMCpack")
(synopsis "Markov Chain Monte Carlo (MCMC) package")
(description
@@ -18871,11 +18358,7 @@ provided.")
(properties `((upstream-name . "cyclocomp")))
(build-system r-build-system)
(propagated-inputs
- `(("r-callr" ,r-callr)
- ("r-crayon" ,r-crayon)
- ("r-desc" ,r-desc)
- ("r-remotes" ,r-remotes)
- ("r-withr" ,r-withr)))
+ (list r-callr r-crayon r-desc r-remotes r-withr))
(home-page "https://github.com/MangoTheCat/cyclocomp")
(synopsis "Cyclomatic complexity of R code")
(description
@@ -18899,18 +18382,18 @@ provides tools to compute this metric.")
(properties `((upstream-name . "lintr")))
(build-system r-build-system)
(propagated-inputs
- `(("r-codetools" ,r-codetools)
- ("r-crayon" ,r-crayon)
- ("r-cyclocomp" ,r-cyclocomp)
- ("r-digest" ,r-digest)
- ("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-knitr" ,r-knitr)
- ("r-rex" ,r-rex)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-testthat" ,r-testthat)
- ("r-xml2" ,r-xml2)
- ("r-xmlparsedata" ,r-xmlparsedata)))
+ (list r-codetools
+ r-crayon
+ r-cyclocomp
+ r-digest
+ r-httr
+ r-jsonlite
+ r-knitr
+ r-rex
+ r-rstudioapi
+ r-testthat
+ r-xml2
+ r-xmlparsedata))
(home-page "https://github.com/jimhester/lintr")
(synopsis "Linter for R code")
(description "This package checks adherence to a given style, syntax
@@ -18931,16 +18414,16 @@ code edited with @code{RStudio IDE}, @code{Emacs} and @code{Vim}.")
"1p3m6i28nlxh6r609syn88cwlbdpl3dw44dy3gsijk2ibq20mfsx"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-future" ,r-future)
- ("r-future-apply" ,r-future-apply)
- ("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-matrixstats" ,r-matrixstats)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-reshape2" ,r-reshape2)))
+ (list r-future
+ r-future-apply
+ r-ggplot2
+ r-gridextra
+ r-mass
+ r-matrix
+ r-matrixstats
+ r-rcpp
+ r-rcpparmadillo
+ r-reshape2))
(home-page "https://github.com/ChristophH/sctransform")
(synopsis "Variance stabilizing transformations for Single Cell UMI Data")
(description
@@ -18969,20 +18452,20 @@ batch correction, and data correction.")
(add-after 'unpack 'set-HOME
(lambda _ (setenv "HOME" "/tmp"))))))
(propagated-inputs
- `(("r-backports" ,r-backports)
- ("r-cli" ,r-cli)
- ("r-glue" ,r-glue)
- ("r-magrittr" ,r-magrittr)
- ("r-purrr" ,r-purrr)
- ("r-r-cache" ,r-r-cache)
- ("r-rematch2" ,r-rematch2)
- ("r-rlang" ,r-rlang)
- ("r-rprojroot" ,r-rprojroot)
- ("r-tibble" ,r-tibble)
- ("r-withr" ,r-withr)
- ("r-xfun" ,r-xfun)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-backports
+ r-cli
+ r-glue
+ r-magrittr
+ r-purrr
+ r-r-cache
+ r-rematch2
+ r-rlang
+ r-rprojroot
+ r-tibble
+ r-withr
+ r-xfun))
+ (native-inputs
+ (list r-knitr))
(home-page "https://github.com/r-lib/styler")
(synopsis "Non-invasive pretty printing of R code")
(description
@@ -19042,7 +18525,7 @@ parallel versions of vectorized R functions of the @code{mc*apply} family.")
(base32
"0413j7gwr5yj14jamkizj55q7xii1a0kgazzj0ilqn2ascclz6k7"))))
(build-system r-build-system)
- (propagated-inputs `(("r-lme4" ,r-lme4)))
+ (propagated-inputs (list r-lme4))
(home-page "https://github.com/vdorie/blme")
(synopsis "Bayesian linear mixed-effects models")
(description
@@ -19064,20 +18547,20 @@ extends the lme4 package.")
"0d2xy77hkzhcnyz8zxcv98i80fx6ripjw4rvyx4ww1d0vjjgqf52"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-backports" ,r-backports)
- ("r-base64url" ,r-base64url)
- ("r-brew" ,r-brew)
- ("r-checkmate" ,r-checkmate)
- ("r-data-table" ,r-data-table)
- ("r-digest" ,r-digest)
- ("r-fs" ,r-fs)
- ("r-progress" ,r-progress)
- ("r-r6" ,r-r6)
- ("r-rappdirs" ,r-rappdirs)
- ("r-stringi" ,r-stringi)
- ("r-withr" ,r-withr)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-backports
+ r-base64url
+ r-brew
+ r-checkmate
+ r-data-table
+ r-digest
+ r-fs
+ r-progress
+ r-r6
+ r-rappdirs
+ r-stringi
+ r-withr))
+ (native-inputs
+ (list r-knitr))
(home-page "https://github.com/mllg/batchtools")
(synopsis "Tools for computation on batch systems")
(description
@@ -19102,7 +18585,7 @@ experiments in a well-organized and reproducible way.")
(base32
"0apgpdnn74mqg2bnr8yjyxgyvdl411h0r2b1r2xd67k21pyxs8bd"))))
(build-system r-build-system)
- (propagated-inputs `(("r-cluster" ,r-cluster)))
+ (propagated-inputs (list r-cluster))
(home-page "https://cran.r-project.org/web/packages/clue/")
(synopsis "Tools for analyzing cluster ensembles")
(description "Cluster ensembles are collections of individual solutions to
@@ -19126,9 +18609,9 @@ consensus and secondary clusterings.")
(base32
"1hm89zi38ldgbskyx1cn7gm87yqy7zrxli8q05a36y1ndvazi3j4"))))
(build-system r-build-system)
- (propagated-inputs `(("r-rcpp" ,r-rcpp)))
+ (propagated-inputs (list r-rcpp))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/coatless/sitmo/")
(synopsis "Parallel pseudo random number generator header files")
(description
@@ -19150,11 +18633,9 @@ dimensional low-discrepancy sequence.")
"1fwsldqcri2lccna4icbmmlqic3w4xyjm7rn0xmikrsw4kzapvjb"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-bh" ,r-bh)
- ("r-rcpp" ,r-rcpp)
- ("r-sitmo" ,r-sitmo)))
+ (list r-bh r-rcpp r-sitmo))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://www.daqana.org/dqrng")
(synopsis "Fast pseudo random number generators")
(description
@@ -19185,10 +18666,8 @@ engine (Salmon et al., 2011) as provided by the package @code{sitmo}.")
(properties `((upstream-name . "ingredients")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-scales" ,r-scales)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-ggplot2 r-gridextra r-scales))
+ (native-inputs (list r-knitr))
(home-page "https://ModelOriented.github.io/ingredients/")
(synopsis "Effects and importances of model ingredients")
(description
@@ -19224,8 +18703,8 @@ feature effects. Key functions are:
"00jzrndb3ahsv6ihp2pvs732n9cc944m83vdinrl9v1pxd82prkh"))))
(properties `((upstream-name . "iBreakDown")))
(build-system r-build-system)
- (propagated-inputs `(("r-ggplot2" ,r-ggplot2)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (propagated-inputs (list r-ggplot2))
+ (native-inputs (list r-knitr))
(home-page "https://ModelOriented.github.io/iBreakDown/")
(synopsis "Model agnostic instance level variable attributions")
(description
@@ -19250,10 +18729,9 @@ classification and regression models.")
"0mq94ah21p1glvsbvdmi2p7nlgz1bvq7w3rz2z3mdqq18kz6nkjw"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-plyr" ,r-plyr)))
+ (list r-ggplot2 r-plyr))
(native-inputs
- `(("r-r-rsp" ,r-r-rsp))) ; vignette builder
+ (list r-r-rsp)) ; vignette builder
(home-page "http://chris.brien.name")
(synopsis "Functions useful in the design and ANOVA of experiments")
(description
@@ -19290,9 +18768,7 @@ been used in the call to @code{aov}.")
(properties `((upstream-name . "DALEX")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-ibreakdown" ,r-ibreakdown)
- ("r-ingredients" ,r-ingredients)))
+ (list r-ggplot2 r-ibreakdown r-ingredients))
(home-page "https://pbiecek.github.io/DALEX/")
(synopsis "Descriptive machine learning explanations")
(description
@@ -19319,11 +18795,9 @@ and model output.")
(properties `((upstream-name . "enrichR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-httr" ,r-httr)
- ("r-rjson" ,r-rjson)))
+ (list r-ggplot2 r-httr r-rjson))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/enrichR/")
(synopsis "R Interface to Enrichr database for analyzing gene sets")
(description
@@ -19345,7 +18819,7 @@ annotated biological functions.")
"1h59zlsyzbjylaziwavppl9bjmnba4iiq34772y3dys6fqclajnh"))))
(properties `((upstream-name . "plot3D")))
(build-system r-build-system)
- (propagated-inputs `(("r-misc3d" ,r-misc3d)))
+ (propagated-inputs (list r-misc3d))
(home-page "https://cran.r-project.org/web/packages/plot3D")
(synopsis "Plot multi-dimensional data")
(description
@@ -19367,15 +18841,15 @@ includes data sets from oceanography.")
"0qls8pyndrlwx75wzlc0xmk04qq263d7065r3d6kvay7haa4nm40"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-scales" ,r-scales)
- ("r-stringr" ,r-stringr)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)))
+ (list r-dplyr
+ r-ggplot2
+ r-gridextra
+ r-scales
+ r-stringr
+ r-tibble
+ r-tidyr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/sinhrks/ggfortify")
(synopsis "Data visualization tools for statistical analysis results")
(description
@@ -19399,14 +18873,14 @@ results and plots in a unified style using the @code{ggplot2} package.")
(properties `((upstream-name . "RefManageR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-lubridate" ,r-lubridate)
- ("r-plyr" ,r-plyr)
- ("r-stringr" ,r-stringr)
- ("r-xml2" ,r-xml2)))
+ (list r-httr
+ r-jsonlite
+ r-lubridate
+ r-plyr
+ r-stringr
+ r-xml2))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/ropensci/RefManageR/")
(synopsis "Straightforward BibTeX and BibLaTeX bibliography management")
(description
@@ -19434,15 +18908,15 @@ into R and converted to @code{BibEntry} objects.")
"1qbarvafjb8jgkrnrhh6jw7mcglmjwf7dpdiibxf39jkmlhf7las"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertthat" ,r-assertthat)
- ("r-curl" ,r-curl)
- ("r-httr" ,r-httr)
- ("r-miniui" ,r-miniui)
- ("r-refmanager" ,r-refmanager)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-shiny" ,r-shiny)
- ("r-shinyjs" ,r-shinyjs)
- ("r-yaml" ,r-yaml)))
+ (list r-assertthat
+ r-curl
+ r-httr
+ r-miniui
+ r-refmanager
+ r-rstudioapi
+ r-shiny
+ r-shinyjs
+ r-yaml))
(home-page "https://github.com/crsh/citr")
(synopsis "RStudio add-in to insert Markdown citations")
(description
@@ -19464,11 +18938,9 @@ the current document.")
"04xbgrrb3aq067hrivslq5f2rd1v95yfv7lkj596ijyqi6ibjl27"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-jsonlite" ,r-jsonlite)
- ("r-matrix" ,r-matrix)))
+ (list r-data-table r-jsonlite r-matrix))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/dmlc/xgboost")
(synopsis "Extreme gradient boosting")
(description
@@ -19495,12 +18967,9 @@ easily.")
"191vpy84s0bar06y9z1qx43x2kc4qp7lmrcmd0cvz2pnzq722jab"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-openssl" ,r-openssl)
- ("r-rcpp" ,r-rcpp)
- ("r-reticulate" ,r-reticulate)
- ("r-rspectra" ,r-rspectra)))
+ (list r-openssl r-rcpp r-reticulate r-rspectra))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/tkonopka/umap")
(synopsis "Uniform manifold approximation and projection")
(description
@@ -19522,14 +18991,14 @@ in R, including a translation of the original algorithm into R.")
"08vxh085wnrxgwy35ksb4cr7ccjvd98pyr2zlgarqryfgc1bdqbf"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-dqrng" ,r-dqrng)
- ("r-fnn" ,r-fnn)
- ("r-irlba" ,r-irlba)
- ("r-matrix" ,r-matrix)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppannoy" ,r-rcppannoy)
- ("r-rcppprogress" ,r-rcppprogress)
- ("r-rspectra" ,r-rspectra)))
+ (list r-dqrng
+ r-fnn
+ r-irlba
+ r-matrix
+ r-rcpp
+ r-rcppannoy
+ r-rcppprogress
+ r-rspectra))
(home-page "https://github.com/jlmelville/uwot")
(synopsis "Uniform manifold approximation and projection")
(description
@@ -19554,22 +19023,22 @@ LargeVis method of Tang et al. (2016) is also provided.")
(properties `((upstream-name . "kableExtra")))
(build-system r-build-system)
(propagated-inputs
- `(("r-digest" ,r-digest)
- ("r-glue" ,r-glue)
- ("r-htmltools" ,r-htmltools)
- ("r-knitr" ,r-knitr)
- ("r-magrittr" ,r-magrittr)
- ("r-rmarkdown" ,r-rmarkdown)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-rvest" ,r-rvest)
- ("r-scales" ,r-scales)
- ("r-stringr" ,r-stringr)
- ("r-svglite" ,r-svglite)
- ("r-viridislite" ,r-viridislite)
- ("r-webshot" ,r-webshot)
- ("r-xml2" ,r-xml2)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-digest
+ r-glue
+ r-htmltools
+ r-knitr
+ r-magrittr
+ r-rmarkdown
+ r-rstudioapi
+ r-rvest
+ r-scales
+ r-stringr
+ r-svglite
+ r-viridislite
+ r-webshot
+ r-xml2))
+ (native-inputs
+ (list r-knitr))
(home-page "https://haozhu233.github.io/kableExtra/")
(synopsis "Construct complex tables with pipe syntax")
(description
@@ -19592,7 +19061,7 @@ customize styles using a readable syntax.")
(sha256
(base32 "02p3612rpydk195n2qr77lp1j2w8zsw1ckkk98c8angm4r5q8dsc"))))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://statweb.stanford.edu/~tibs/glasso/")
(synopsis "Graphical Lasso: estimation of Gaussian graphical models")
(description
@@ -19683,11 +19152,9 @@ computed using the L1 (Manhattan, taxicab) metric.")
(properties `((upstream-name . "leiden")))
(build-system r-build-system)
(propagated-inputs
- `(("r-igraph" ,r-igraph)
- ("r-matrix" ,r-matrix)
- ("r-reticulate" ,r-reticulate)))
+ (list r-igraph r-matrix r-reticulate))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/TomKellyGenetics/leiden")
(synopsis "R implementation of Leiden clustering algorithm")
(description
@@ -19710,10 +19177,9 @@ guaranteeing well-connected communities.\" <arXiv:1810.08473>.")
"10glgkf58lcykcwda1hj6xdps02m3i247qynk6s2jmwljagps3fg"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-gtable" ,r-gtable)))
+ (list r-ggplot2 r-gtable))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/thomasp85/patchwork")
(synopsis "Compose ggplot2 plots")
(description
@@ -19756,26 +19222,26 @@ multiple plots.")
(find-files "." "\\.class$"))
#t)))))
(propagated-inputs
- `(("r-cowplot" ,r-cowplot)
- ("r-dosnow" ,r-dosnow)
- ("r-dplyr" ,r-dplyr)
- ("r-fnn" ,r-fnn)
- ("r-foreach" ,r-foreach)
- ("r-ggplot2" ,r-ggplot2)
- ("r-ggrepel" ,r-ggrepel)
- ("r-hmisc" ,r-hmisc)
- ("r-ica" ,r-ica)
- ("r-irlba" ,r-irlba)
- ("r-matrix" ,r-matrix)
- ("r-mclust" ,r-mclust)
- ("r-patchwork" ,r-patchwork)
- ("r-plyr" ,r-plyr)
- ("r-rann-l1" ,r-rann-l1)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-riverplot" ,r-riverplot)
- ("r-rtsne" ,r-rtsne)
- ("r-snow" ,r-snow)))
+ (list r-cowplot
+ r-dosnow
+ r-dplyr
+ r-fnn
+ r-foreach
+ r-ggplot2
+ r-ggrepel
+ r-hmisc
+ r-ica
+ r-irlba
+ r-matrix
+ r-mclust
+ r-patchwork
+ r-plyr
+ r-rann-l1
+ r-rcpp
+ r-rcpparmadillo
+ r-riverplot
+ r-rtsne
+ r-snow))
(native-inputs
`(("jdk" ,icedtea "jdk")
;; See https://github.com/MacoskoLab/liger/issues/96
@@ -19819,19 +19285,19 @@ dataset-specific factors.")
#t))))
(build-system r-build-system)
(propagated-inputs
- `(("r-cowplot" ,r-cowplot)
- ("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-irlba" ,r-irlba)
- ("r-matrix" ,r-matrix)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-rcppprogress" ,r-rcppprogress)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)))
+ (list r-cowplot
+ r-dplyr
+ r-ggplot2
+ r-irlba
+ r-matrix
+ r-rcpp
+ r-rcpparmadillo
+ r-rcppprogress
+ r-rlang
+ r-tibble
+ r-tidyr))
(native-inputs
- `(("autoconf" ,autoconf)))
+ (list autoconf))
(home-page "https://github.com/immunogenomics/harmony")
(synopsis "Integration of single cell sequencing data")
(description
@@ -19854,15 +19320,15 @@ function and interfaces to external frameworks.")
(properties `((upstream-name . "covr")))
(build-system r-build-system)
(propagated-inputs
- `(("r-crayon" ,r-crayon)
- ("r-digest" ,r-digest)
- ("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-rex" ,r-rex)
- ("r-withr" ,r-withr)
- ("r-yaml" ,r-yaml)))
+ (list r-crayon
+ r-digest
+ r-httr
+ r-jsonlite
+ r-rex
+ r-withr
+ r-yaml))
(native-inputs
- `(("r-knitr" ,r-knitr))) ; for vignettes
+ (list r-knitr)) ; for vignettes
(home-page "https://github.com/r-lib/covr")
(synopsis "Test coverage for R packages")
(description
@@ -19888,13 +19354,12 @@ both R code and compiled C/C++/FORTRAN code.")
(properties `((upstream-name . "systemfonts")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cpp11" ,r-cpp11)))
+ (list r-cpp11))
(inputs
`(("fontconfig" ,fontconfig)
("zlib" ,zlib)))
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("r-knitr" ,r-knitr)))
+ (list pkg-config r-knitr))
(home-page "https://github.com/r-lib/systemfonts")
(synopsis "System native font finding")
(description
@@ -19919,9 +19384,7 @@ be used further by e.g. graphic devices.")
(properties `((upstream-name . "graphlayouts")))
(build-system r-build-system)
(propagated-inputs
- `(("r-igraph" ,r-igraph)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)))
+ (list r-igraph r-rcpp r-rcpparmadillo))
(home-page "https://github.com/schochastics/graphlayouts")
(synopsis "Additional layout algorithms for network visualizations")
(description
@@ -19946,15 +19409,15 @@ emphasize hidden group structures in networks or focus on specific nodes.")
(properties `((upstream-name . "terra")))
(build-system r-build-system)
(inputs
- `(("gdal" ,gdal)
- ("geos" ,geos)
- ("proj" ,proj)
- ("sqlite" ,sqlite) ; needed for proj
- ("zlib" ,zlib)))
+ (list gdal
+ geos
+ proj
+ sqlite ; needed for proj
+ zlib))
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)))
+ (list r-rcpp))
(native-inputs
- `(("pkg-config" ,pkg-config)))
+ (list pkg-config))
(home-page "https://rspatial.org/terra")
(synopsis "Spatial data analysis")
(description
@@ -19980,15 +19443,15 @@ files is supported.")
(properties `((upstream-name . "tidygraph")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-igraph" ,r-igraph)
- ("r-magrittr" ,r-magrittr)
- ("r-pillar" ,r-pillar)
- ("r-r6" ,r-r6)
- ("r-rcpp" ,r-rcpp)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)))
+ (list r-dplyr
+ r-igraph
+ r-magrittr
+ r-pillar
+ r-r6
+ r-rcpp
+ r-rlang
+ r-tibble
+ r-tidyr))
(home-page "https://github.com/thomasp85/tidygraph")
(synopsis "Tidy API for graph manipulation")
(description
@@ -20018,9 +19481,7 @@ common graph algorithms.")
(properties `((upstream-name . "SoupX")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-matrix" ,r-matrix)
- ("r-seurat" ,r-seurat)))
+ (list r-ggplot2 r-matrix r-seurat))
(home-page "https://github.com/constantAmateur/SoupX")
(synopsis "Single cell mRNA Soup eXterminator")
(description
@@ -20042,11 +19503,9 @@ cell RNA-seq experiments.")
"00764vv86r3bn4r85in4w637harffyw605fgq0dj6mrbrwcfb650"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-mass" ,r-mass)
- ("r-rlang" ,r-rlang)))
+ (list r-dplyr r-mass r-rlang))
(native-inputs
- `(("r-knitr" ,r-knitr))) ; needed for vignette
+ (list r-knitr)) ; needed for vignette
(home-page "https://github.com/ropensci/assertr")
(synopsis "Assertive programming for R analysis pipelines")
(description
@@ -20070,11 +19529,9 @@ in pipelines.")
(properties `((upstream-name . "parameters")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bayestestr" ,r-bayestestr)
- ("r-datawizard" ,r-datawizard)
- ("r-insight" ,r-insight)))
+ (list r-bayestestr r-datawizard r-insight))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/parameters")
(synopsis "Processing of model parameters")
(description
@@ -20099,14 +19556,11 @@ effect size.")
(properties `((upstream-name . "rgdal")))
(build-system r-build-system)
(inputs
- `(("gdal" ,gdal)
- ("proj" ,proj)
- ("zlib" ,zlib)))
+ (list gdal proj zlib))
(propagated-inputs
- `(("r-sp" ,r-sp)))
+ (list r-sp))
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("r-knitr" ,r-knitr)))
+ (list pkg-config r-knitr))
(home-page "http://rgdal.r-forge.r-project.org")
(synopsis "Bindings for the Geospatial Data Abstraction Library")
(description
@@ -20129,9 +19583,9 @@ PROJ.4 library.")
(properties `((upstream-name . "insol")))
(build-system r-build-system)
(propagated-inputs
- `(("r-raster" ,r-raster)))
+ (list r-raster))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://meteoexploration.com/R/insol/index.html")
(synopsis "Tools for calculating solar radiation")
(description
@@ -20156,10 +19610,9 @@ atmospheric physics.")
(properties `((upstream-name . "lifecycle")))
(build-system r-build-system)
(propagated-inputs
- `(("r-glue" ,r-glue)
- ("r-rlang" ,r-rlang)))
+ (list r-glue r-rlang))
(native-inputs
- `(("r-knitr" ,r-knitr))) ; for vignettes
+ (list r-knitr)) ; for vignettes
(home-page "https://github.com/r-lib/lifecycle")
(synopsis "Manage the life cycle of your package functions")
(description
@@ -20185,9 +19638,9 @@ signalled with increasing levels of non-invasive verbosity.")
"1cciil1nzxd8gbj49w99jiv077lbpb59vx7bmb4p218aj2h5hqq4"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)))
+ (list r-data-table))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/assertable/")
(synopsis "Verbose assertions for tabular data (data.frames and data.tables)")
(description "This package provides simple, flexible assertions on
@@ -20213,7 +19666,7 @@ data.table.")
(base32 "1ka9g8zak8sg4y2xbz93dfrldznlk9qpd4pq9z21cdcdn3b8s4i2"))))
(build-system r-build-system)
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/quadprog")
(synopsis "Functions to solve quadratic programming problems")
(description
@@ -20234,7 +19687,7 @@ programming problems.")
(properties `((upstream-name . "deSolve")))
(build-system r-build-system)
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://desolve.r-forge.r-project.org/")
(synopsis "Solvers for initial value problems of differential equations")
(description "This package provides functions that solve initial value
@@ -20281,7 +19734,7 @@ porting.")
"1yfbfjvpbhgky7vihw3f4jl41pxpqb39z4nc045d5z7z48bdl18d"))))
(build-system r-build-system)
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/subplex")
(synopsis "Unconstrained optimization using the subplex algorithm")
(description
@@ -20324,10 +19777,10 @@ as a boxplot function.")
"1jvcmpzi9knhxq5jsbhg8slm8hnlx2y8smmwwrbnbyd0rmk5fhci"))))
(properties `((upstream-name . "bio3d")))
(build-system r-build-system)
- (inputs `(("zlib" ,zlib)))
- (propagated-inputs `(("r-rcpp" ,r-rcpp)))
+ (inputs (list zlib))
+ (propagated-inputs (list r-rcpp))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "http://thegrantlab.org/bio3d/")
(synopsis "Biological structure analysis")
(description
@@ -20358,10 +19811,7 @@ structural data.")
(properties `((upstream-name . "Bios2cor")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bigmemory" ,r-bigmemory)
- ("r-bio3d" ,r-bio3d)
- ("r-circular" ,r-circular)
- ("r-igraph" ,r-igraph)))
+ (list r-bigmemory r-bio3d r-circular r-igraph))
(home-page "https://cran.r-project.org/web/packages/Bios2cor/")
(synopsis "From biological sequences and simulations to correlation analysis")
(description
@@ -20433,9 +19883,7 @@ tools for help in data interpretation.")
(base32
"0y7byf6kcinfz9ac59jxc4v6kppdazmnyqfav0dm4h550fzfqqlg"))))))
(propagated-inputs
- `(("r-htmlwidgets" ,r-htmlwidgets)
- ("r-igraph" ,r-igraph)
- ("r-magrittr" ,r-magrittr)))
+ (list r-htmlwidgets r-igraph r-magrittr))
(home-page "https://cran.r-project.org/package=networkD3")
(synopsis "D3 JavaScript network graphs from R")
(description
@@ -20457,15 +19905,15 @@ graphs from R.")
(properties `((upstream-name . "aaSEA")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bios2cor" ,r-bios2cor)
- ("r-dt" ,r-dt)
- ("r-hmisc" ,r-hmisc)
- ("r-magrittr" ,r-magrittr)
- ("r-networkd3" ,r-networkd3)
- ("r-plotly" ,r-plotly)
- ("r-seqinr" ,r-seqinr)
- ("r-shiny" ,r-shiny)
- ("r-shinydashboard" ,r-shinydashboard)))
+ (list r-bios2cor
+ r-dt
+ r-hmisc
+ r-magrittr
+ r-networkd3
+ r-plotly
+ r-seqinr
+ r-shiny
+ r-shinydashboard))
(home-page "https://cran.r-project.org/web/packages/aaSEA/")
(synopsis "Amino acid substitution effect analyzer")
(description
@@ -20489,8 +19937,7 @@ single, multiple and correlated amino acid substitutions in proteins.")
(properties `((upstream-name . "ABACUS")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-shiny" ,r-shiny)))
+ (list r-ggplot2 r-shiny))
(home-page "https://shiny.abdn.ac.uk/Stats/apps/")
(synopsis "Apps-based activities for communicating and understanding statistics")
(description
@@ -20535,8 +19982,7 @@ beta analysis to identify candidate genes containing multiple CpG sites.")
(properties `((upstream-name . "abcADM")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bh" ,r-bh)
- ("r-rcpp" ,r-rcpp)))
+ (list r-bh r-rcpp))
(home-page "https://cran.r-project.org/web/packages/abcADM/")
(synopsis "Fit accumulated damage models and estimate reliability using ABC")
(description
@@ -20560,9 +20006,9 @@ long-term reliability under stochastic load profiles.")
(properties `((upstream-name . "Rglpk")))
(build-system r-build-system)
(propagated-inputs
- `(("r-slam" ,r-slam)))
+ (list r-slam))
(inputs
- `(("glpk" ,glpk)))
+ (list glpk))
(home-page "https://r-forge.r-project.org/projects/rglp/")
(synopsis "R interface to the GNU Linear Programming Kit")
(description
@@ -20586,10 +20032,7 @@ integer linear programming} (MILP) and other related problems.")
(properties `((upstream-name . "abcdeFBA")))
(build-system r-build-system)
(propagated-inputs
- `(("r-corrplot" ,r-corrplot)
- ("r-lattice" ,r-lattice)
- ("r-rgl" ,r-rgl)
- ("r-rglpk" ,r-rglpk)))
+ (list r-corrplot r-lattice r-rgl r-rglpk))
(home-page "https://cran.r-project.org/web/packages/abcdeFBA/")
(synopsis "A-Biologist-Can-Do-Everything of Flux Balance Analysis with this package")
(description
@@ -20635,7 +20078,7 @@ overall risk.")
(properties `((upstream-name . "abemus")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)))
+ (list r-data-table))
(home-page "https://cran.r-project.org/web/packages/abemus/")
(synopsis "Adaptive base error model in ultra-deep sequencing data")
(description
@@ -20685,8 +20128,7 @@ cell free DNA} (cfDNA).")
(base32
"0vh5n7hqqyx2pdvlqq6xadfqibcn78h5961rwhpf817kpxfzv8v7"))))))
(propagated-inputs
- `(("r-jsonlite" ,r-jsonlite)
- ("r-shiny" ,r-shiny)))
+ (list r-jsonlite r-shiny))
(home-page "https://github.com/carlganz/rintrojs")
(synopsis "Wrapper for the Intro.js library")
(description
@@ -20712,11 +20154,9 @@ server-side.")
(properties `((upstream-name . "sysfonts")))
(build-system r-build-system)
(inputs
- `(("freetype" ,freetype)
- ("libpng" ,libpng)
- ("zlib" ,zlib)))
+ (list freetype libpng zlib))
(native-inputs
- `(("pkg-config" ,pkg-config)))
+ (list pkg-config))
(home-page "https://github.com/yixuan/sysfonts")
(synopsis "Loading fonts into R")
(description
@@ -20738,7 +20178,7 @@ into R, in order to support other packages.")
(properties `((upstream-name . "showtextdb")))
(build-system r-build-system)
(propagated-inputs
- `(("r-sysfonts" ,r-sysfonts)))
+ (list r-sysfonts))
(home-page "https://cran.r-project.org/web/packages/showtextdb/")
(synopsis "Font files for the 'showtext' package")
(description
@@ -20760,15 +20200,11 @@ package.")
(properties `((upstream-name . "showtext")))
(build-system r-build-system)
(inputs
- `(("freetype" ,freetype)
- ("libpng" ,libpng)
- ("zlib" ,zlib)))
+ (list freetype libpng zlib))
(propagated-inputs
- `(("r-showtextdb" ,r-showtextdb)
- ("r-sysfonts" ,r-sysfonts)))
+ (list r-showtextdb r-sysfonts))
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("r-knitr" ,r-knitr)))
+ (list pkg-config r-knitr))
(home-page "https://github.com/yixuan/showtext")
(synopsis "Using fonts more easily in R graphs")
(description
@@ -20794,12 +20230,9 @@ such as Ghostscript is needed to use this package.")
(properties `((upstream-name . "emojifont")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-proto" ,r-proto)
- ("r-showtext" ,r-showtext)
- ("r-sysfonts" ,r-sysfonts)))
+ (list r-ggplot2 r-proto r-showtext r-sysfonts))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://guangchuangyu.github.io/emojifont")
(synopsis "Emoji and Font Awesome in R graphics")
(description
@@ -20821,13 +20254,13 @@ both base and ggplot2 graphics.")
(properties `((upstream-name . "abstractr")))
(build-system r-build-system)
(propagated-inputs
- `(("r-colourpicker" ,r-colourpicker)
- ("r-emojifont" ,r-emojifont)
- ("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-rintrojs" ,r-rintrojs)
- ("r-shiny" ,r-shiny)
- ("r-shinythemes" ,r-shinythemes)))
+ (list r-colourpicker
+ r-emojifont
+ r-ggplot2
+ r-gridextra
+ r-rintrojs
+ r-shiny
+ r-shinythemes))
(home-page "https://matt-kumar.shinyapps.io/portfolio")
(synopsis "R-Shiny application for creating visual abstracts")
(description
@@ -20850,11 +20283,8 @@ included.")
(properties `((upstream-name . "qgam")))
(build-system r-build-system)
(propagated-inputs
- `(("r-doparallel" ,r-doparallel)
- ("r-mgcv" ,r-mgcv)
- ("r-plyr" ,r-plyr)
- ("r-shiny" ,r-shiny)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-doparallel r-mgcv r-plyr r-shiny))
+ (native-inputs (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/qgam/")
(synopsis "Smooth additive quantile regression models")
(description
@@ -20883,14 +20313,14 @@ regression models.")
(properties `((upstream-name . "abtest")))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-plotrix" ,r-plotrix)
- ("r-qgam" ,r-qgam)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-rcpp" ,r-rcpp)
- ("r-sn" ,r-sn)
- ("r-truncnorm" ,r-truncnorm)))
+ (list r-matrix
+ r-mvtnorm
+ r-plotrix
+ r-qgam
+ r-rcolorbrewer
+ r-rcpp
+ r-sn
+ r-truncnorm))
(home-page "https://cran.r-project.org/web/packages/abtest/")
(synopsis "Bayesian A/B testing")
(description
@@ -20913,8 +20343,7 @@ elicitation options based on Kass and Vaidyanathan (1992)
(properties `((upstream-name . "reldist")))
(build-system r-build-system)
(propagated-inputs
- `(("r-hmisc" ,r-hmisc)
- ("r-mgcv" ,r-mgcv)))
+ (list r-hmisc r-mgcv))
(home-page "http://www.stat.ucla.edu/~handcock/RelDist")
(synopsis "Relative distribution methods")
(description
@@ -20941,8 +20370,7 @@ Social Sciences\" by Mark S. Handcock and Martina Morris, Springer-Verlag,
(properties `((upstream-name . "accept")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-reldist" ,r-reldist)))
+ (list r-dplyr r-reldist))
(home-page "https://cran.r-project.org/web/packages/accept/")
(synopsis "Acute COPD Exacerbation Prediction Tool (ACCEPT)")
(description
@@ -20966,10 +20394,7 @@ Adibi et al. (2019) @url{doi:10.1101/651901}.")
(properties `((upstream-name . "SMPracticals")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ellipse" ,r-ellipse)
- ("r-mass" ,r-mass)
- ("r-nlme" ,r-nlme)
- ("r-survival" ,r-survival)))
+ (list r-ellipse r-mass r-nlme r-survival))
(home-page "http://statwww.epfl.ch/davison/SM/")
(synopsis "Practicals for use with Davison (2003) Statistical Models")
(description
@@ -21020,8 +20445,7 @@ experienced.")
(properties `((upstream-name . "tcltk2")))
(build-system r-build-system)
(inputs
- `(("tcl" ,tcl)
- ("tk" ,tk)))
+ (list tcl tk))
(home-page "https://www.sciviews.org/SciViews-R")
(synopsis "Tcl/Tk additions")
(description
@@ -21043,9 +20467,7 @@ with style and various functions to supplement the tcltk package")
(properties `((upstream-name . "accrual")))
(build-system r-build-system)
(propagated-inputs
- `(("r-fgui" ,r-fgui)
- ("r-smpracticals" ,r-smpracticals)
- ("r-tcltk2" ,r-tcltk2)))
+ (list r-fgui r-smpracticals r-tcltk2))
(home-page "https://cran.r-project.org/web/packages/accrual/")
(synopsis "Bayesian accrual prediction")
(description
@@ -21092,8 +20514,8 @@ data.")
"1hq0zhhz9klmp4zcr1w8hyn7s1h9kfg57d2l2mfm7psx459j0krl"))))
(properties `((upstream-name . "mda")))
(build-system r-build-system)
- (propagated-inputs `(("r-class" ,r-class)))
- (native-inputs `(("gfortran" ,gfortran)))
+ (propagated-inputs (list r-class))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/mda/")
(synopsis "Mixture and flexible discriminant analysis")
(description
@@ -21115,7 +20537,7 @@ data.")
(properties `((upstream-name . "elasticnet")))
(build-system r-build-system)
(propagated-inputs
- `(("r-lars" ,r-lars)))
+ (list r-lars))
(home-page "http://users.stat.umn.edu/~zouxx019/")
(synopsis "Elastic-Net for sparse estimation and sparse PCA")
(description
@@ -21138,9 +20560,7 @@ Components. The Lasso solution paths can be computed by the same function.")
(properties `((upstream-name . "sparseLDA")))
(build-system r-build-system)
(propagated-inputs
- `(("r-elasticnet" ,r-elasticnet)
- ("r-mass" ,r-mass)
- ("r-mda" ,r-mda)))
+ (list r-elasticnet r-mass r-mda))
(home-page "https://www.imm.dtu.dk/~lkhc/")
(synopsis "Sparse discriminant analysis")
(description
@@ -21162,12 +20582,12 @@ and mixture of Gaussian models.")
(properties `((upstream-name . "accSDA")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-ggthemes" ,r-ggthemes)
- ("r-gridextra" ,r-gridextra)
- ("r-mass" ,r-mass)
- ("r-rarpack" ,r-rarpack)
- ("r-sparselda" ,r-sparselda)))
+ (list r-ggplot2
+ r-ggthemes
+ r-gridextra
+ r-mass
+ r-rarpack
+ r-sparselda))
(home-page "https://github.com/gumeo/accSDA/wiki")
(synopsis "Accelerated sparse discriminant analysis")
(description
@@ -21195,7 +20615,7 @@ discriminant} (SZVD) analysis is also included in the package.")
(properties `((upstream-name . "ace2fastq")))
(build-system r-build-system)
(propagated-inputs
- `(("r-stringr" ,r-stringr)))
+ (list r-stringr))
(home-page "https://github.com/c5sire/ace2fastq")
(synopsis "ACE file to FASTQ converter")
(description
@@ -21240,8 +20660,7 @@ on Linear Recurrences Modulo 2'', ACM Transactions on Mathematical Software.")
"1nz6h0j5ywdh48m0swmhp34hbkycd7n13rclrxaw85qi9wc42597"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-knitr" ,r-knitr)
- ("r-nnls" ,r-nnls)))
+ (list r-knitr r-nnls))
(home-page "https://cran.r-project.org/web/packages/rNMF/")
(synopsis "Robust nonnegative matrix factorization")
(description
@@ -21267,9 +20686,9 @@ and prints vectorized images.")
(properties `((upstream-name . "randtoolbox")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rngwell" ,r-rngwell)))
+ (list r-rngwell))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/randtoolbox/")
(synopsis "Toolbox for pseudo and quasi random number generation")
(description
@@ -21303,9 +20722,9 @@ See e.g. Gentle (2003) @url{doi:10.1007/b97336}.")
"1l861h76q5w0nbnbybhgg7hiw7fks677jakyd49n1whwvd48sfz4"))))
(properties `((upstream-name . "lhs")))
(build-system r-build-system)
- (propagated-inputs `(("r-rcpp" ,r-rcpp)))
+ (propagated-inputs (list r-rcpp))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/bertcarnell/lhs")
(synopsis "Latin Hypercube Samples")
(description
@@ -21327,11 +20746,7 @@ Latin Hypercube Samples.")
(properties `((upstream-name . "acebayes")))
(build-system r-build-system)
(propagated-inputs
- `(("r-compare" ,r-compare)
- ("r-lhs" ,r-lhs)
- ("r-randtoolbox" ,r-randtoolbox)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)))
+ (list r-compare r-lhs r-randtoolbox r-rcpp r-rcpparmadillo))
(home-page "https://cran.r-project.org/web/packages/acebayes/")
(synopsis "Optimal Bayesian experimental design using the ACE algorithm")
(description
@@ -21358,10 +20773,7 @@ to maximise an approximation to the expectation of the utility function.")
(properties `((upstream-name . "ACEt")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bh" ,r-bh)
- ("r-mass" ,r-mass)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)))
+ (list r-bh r-mass r-rcpp r-rcpparmadillo))
(home-page "https://cran.r-project.org/web/packages/ACEt/")
(synopsis "Estimating dynamic heritability and twin model comparison")
(description
@@ -21384,7 +20796,7 @@ to age using B-splines and P-splines.")
(properties `((upstream-name . "acfMPeriod")))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)))
+ (list r-mass))
(home-page "https://cran.r-project.org/web/packages/acfMPeriod/")
(synopsis "Estimation of the ACF from the M-periodogram")
(description
@@ -21434,11 +20846,7 @@ models.")
(properties `((upstream-name . "gamlss")))
(build-system r-build-system)
(propagated-inputs
- `(("r-gamlss-data" ,r-gamlss-data)
- ("r-gamlss-dist" ,r-gamlss-dist)
- ("r-mass" ,r-mass)
- ("r-nlme" ,r-nlme)
- ("r-survival" ,r-survival)))
+ (list r-gamlss-data r-gamlss-dist r-mass r-nlme r-survival))
(home-page "http://www.gamlss.org/")
(synopsis "Generalized additive models for location scale and shape")
(description
@@ -21465,9 +20873,7 @@ explanatory variables.")
(properties `((upstream-name . "acid")))
(build-system r-build-system)
(propagated-inputs
- `(("r-gamlss" ,r-gamlss)
- ("r-gamlss-dist" ,r-gamlss-dist)
- ("r-hmisc" ,r-hmisc)))
+ (list r-gamlss r-gamlss-dist r-hmisc))
(home-page "https://cran.r-project.org/web/packages/acid/")
(synopsis "Analysing conditional income distributions")
(description
@@ -21493,7 +20899,7 @@ analysis of income distributions at the disaggregated level.")
"1wqzc35i1rshx0zlmas8y4qkkvy6h9r4i4apscjjv1xg2wjflzxa"))))
(properties `((upstream-name . "acm4r")))
(build-system r-build-system)
- (propagated-inputs `(("r-mass" ,r-mass)))
+ (propagated-inputs (list r-mass))
(home-page "https://cran.r-project.org/web/packages/acm4r/")
(synopsis "Align-and-count method comparisons of RFLP data")
(description
@@ -21539,8 +20945,7 @@ the appropriate system call provided by the underlying operating system.")
(build-system r-build-system)
;; These inputs are needed for vignettes
(native-inputs
- `(("r-knitr" ,r-knitr)
- ("r-rmarkdown" ,r-rmarkdown)))
+ (list r-knitr r-rmarkdown))
(home-page "https://github.com/andreyshabalin/filematrix")
(synopsis "File-backed matrix class with convenient read and write access")
(description
@@ -21567,7 +20972,7 @@ columns, ad allows for quick addition of extra columns to a filematrix.")
(properties `((upstream-name . "ACMEeqtl")))
(build-system r-build-system)
(propagated-inputs
- `(("r-filematrix" ,r-filematrix)))
+ (list r-filematrix))
(home-page "https://github.com/andreyshabalin/ACMEeqtl")
(synopsis "Estimation of interpretable eQTL effect sizes")
(description
@@ -21591,7 +20996,7 @@ p-values with well controlled Type-I error.")
"000b2hqlhj93958nddw0fqb15ahigs08najv2miivym046x04mf7"))))
(properties `((upstream-name . "acmeR")))
(build-system r-build-system)
- (propagated-inputs `(("r-foreign" ,r-foreign)))
+ (propagated-inputs (list r-foreign))
(home-page "https://cran.r-project.org/web/packages/acmeR/")
(synopsis "ACME estimator of bird and bat mortality by wind turbines")
(description
@@ -21619,9 +21024,7 @@ settings.")
(properties `((upstream-name . "R.huge")))
(build-system r-build-system)
(propagated-inputs
- `(("r-r-methodss3" ,r-r-methodss3)
- ("r-r-oo" ,r-r-oo)
- ("r-r-utils" ,r-r-utils)))
+ (list r-r-methodss3 r-r-oo r-r-utils))
(home-page "https://github.com/HenrikBengtsson/R.huge")
(synopsis "Methods for accessing huge amounts of data")
(description
@@ -21650,11 +21053,7 @@ the @code{aroma.affymetrix} package.")
(add-after 'unpack 'set-HOME
(lambda _ (setenv "HOME" "/tmp"))))))
(propagated-inputs
- `(("r-digest" ,r-digest)
- ("r-r-cache" ,r-r-cache)
- ("r-r-methodss3" ,r-r-methodss3)
- ("r-r-oo" ,r-r-oo)
- ("r-r-utils" ,r-r-utils)))
+ (list r-digest r-r-cache r-r-methodss3 r-r-oo r-r-utils))
(home-page "https://github.com/HenrikBengtsson/R.filesets")
(synopsis "Easy handling of and access to files")
(description
@@ -21682,10 +21081,7 @@ identify file sets and individual files.")
(properties `((upstream-name . "R.devices")))
(build-system r-build-system)
(propagated-inputs
- `(("r-base64enc" ,r-base64enc)
- ("r-r-methodss3" ,r-r-methodss3)
- ("r-r-oo" ,r-r-oo)
- ("r-r-utils" ,r-r-utils)))
+ (list r-base64enc r-r-methodss3 r-r-oo r-r-utils))
(home-page "https://github.com/HenrikBengtsson/R.devices")
(synopsis "Unified handling of graphics devices")
(description
@@ -21758,7 +21154,7 @@ provided as well.")
"12nixpqrc5gp7p2clr7ia6jwb0jq2i3brlxiwlp00ixmnm5g1jyd"))))
(properties `((upstream-name . "tuneR")))
(build-system r-build-system)
- (propagated-inputs `(("r-signal" ,r-signal)))
+ (propagated-inputs (list r-signal))
(home-page "https://cran.r-project.org/web/packages/tuneR/")
(synopsis "Analysis of music and speech")
(description
@@ -21783,9 +21179,9 @@ transcription, ...")
(properties `((upstream-name . "seewave")))
(build-system r-build-system)
(inputs
- `(("libsndfile" ,libsndfile)))
+ (list libsndfile))
(propagated-inputs
- `(("r-tuner" ,r-tuner)))
+ (list r-tuner))
(home-page "http://rug.mnhn.fr/seewave")
(synopsis "Sound analysis and synthesis")
(description
@@ -21812,9 +21208,7 @@ and 3D spectrograms and many other analyses.")
`((upstream-name . "AcousticNDLCodeR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-seewave" ,r-seewave)
- ("r-tuner" ,r-tuner)
- ("r-zoo" ,r-zoo)))
+ (list r-seewave r-tuner r-zoo))
(home-page "https://cran.r-project.org/web/packages/AcousticNDLCodeR/")
(synopsis "Coding sound files for use with NDL")
(description
@@ -21840,8 +21234,7 @@ unit.\" @url{doi:10.1371/journal.pone.0174623}")
(properties `((upstream-name . "acp")))
(build-system r-build-system)
(propagated-inputs
- `(("r-quantmod" ,r-quantmod)
- ("r-tseries" ,r-tseries)))
+ (list r-quantmod r-tseries))
(home-page "https://cran.r-project.org/web/packages/acp/")
(synopsis "Autoregressive conditional Poisson")
(description
@@ -21863,7 +21256,7 @@ model (ACP(p,q)) proposed by Heinen (2003).")
"1h3a07czp0w3hrhjcg1fz721y8vsfclzqi3rq8qfzgpfb4h1f06r"))))
(properties `((upstream-name . "ada")))
(build-system r-build-system)
- (propagated-inputs `(("r-rpart" ,r-rpart)))
+ (propagated-inputs (list r-rpart))
(home-page "https://cran.r-project.org/web/packages/ada/")
(synopsis "Stochastic boosting")
(description
@@ -21908,10 +21301,7 @@ floating point chromosomes.")
(properties `((upstream-name . "kernelFactory")))
(build-system r-build-system)
(propagated-inputs
- `(("r-auc" ,r-auc)
- ("r-genalg" ,r-genalg)
- ("r-kernlab" ,r-kernlab)
- ("r-randomforest" ,r-randomforest)))
+ (list r-auc r-genalg r-kernlab r-randomforest))
(home-page "https://cran.r-project.org/web/packages/kernelFactory/")
(synopsis "Ensemble of kernel machines")
(description
@@ -21953,10 +21343,7 @@ classes into dummy/indicator variables.")
(properties `((upstream-name . "aCRM")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ada" ,r-ada)
- ("r-dummies" ,r-dummies)
- ("r-kernelfactory" ,r-kernelfactory)
- ("r-randomforest" ,r-randomforest)))
+ (list r-ada r-dummies r-kernelfactory r-randomforest))
(home-page "https://cran.r-project.org/web/packages/aCRM/")
(synopsis "Convenience functions for analytical customer relationship management")
(description
@@ -21996,8 +21383,7 @@ and regression trees.")
(properties `((upstream-name . "treeClust")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cluster" ,r-cluster)
- ("r-rpart" ,r-rpart)))
+ (list r-cluster r-rpart))
(home-page "https://cran.r-project.org/web/packages/treeClust/")
(synopsis "Cluster distances through trees")
(description
@@ -22020,8 +21406,7 @@ clustering.")
(properties `((upstream-name . "AcrossTic")))
(build-system r-build-system)
(propagated-inputs
- `(("r-lpsolve" ,r-lpsolve)
- ("r-treeclust" ,r-treeclust)))
+ (list r-lpsolve r-treeclust))
(home-page "https://cran.r-project.org/web/packages/AcrossTic/")
(synopsis "Cost-minimal regular spanning subgraph with TreeClust")
(description
@@ -22044,9 +21429,7 @@ distribution.")
(properties `((upstream-name . "acrt")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)
- ("r-sandwich" ,r-sandwich)))
+ (list r-rcpp r-rcppeigen r-sandwich))
(home-page "https://cran.r-project.org/web/packages/acrt/")
(synopsis "Autocorrelation robust testing")
(description
@@ -22069,11 +21452,7 @@ errors.")
(properties `((upstream-name . "acs")))
(build-system r-build-system)
(propagated-inputs
- `(("r-httr" ,r-httr)
- ("r-plyr" ,r-plyr)
- ("r-rcpp" ,r-rcpp)
- ("r-stringr" ,r-stringr)
- ("r-xml" ,r-xml)))
+ (list r-httr r-plyr r-rcpp r-stringr r-xml))
(home-page "https://dusp.mit.edu/faculty/ezra-haber-glenn")
(synopsis "Work with data from the US Census")
(description
@@ -22129,8 +21508,7 @@ distribution of the halting states.")
(properties `((upstream-name . "acss")))
(build-system r-build-system)
(propagated-inputs
- `(("r-acss-data" ,r-acss-data)
- ("r-zoo" ,r-zoo)))
+ (list r-acss-data r-zoo))
(home-page "http://complexitycalculator.com/methodology.html")
(synopsis "Algorithmic complexity for short strings")
(description
@@ -22158,7 +21536,7 @@ complexity are also provided: entropy and change complexity.")
(properties `((upstream-name . "ACSWR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)))
+ (list r-mass))
(home-page "https://cran.r-project.org/web/packages/ACSWR/")
(synopsis "Companion package for the book \"A Course in Statistics with R\"")
(description
@@ -22179,7 +21557,7 @@ R\" (ISBN 978-1-119-15272-9.)")
"0mlgk929gdismikwx4k2ndqq57nnqj7mlgvd3479b214hksgq036"))))
(properties `((upstream-name . "alabama")))
(build-system r-build-system)
- (propagated-inputs `(("r-numderiv" ,r-numderiv)))
+ (propagated-inputs (list r-numderiv))
(home-page "https://cran.r-project.org/web/packages/alabama/")
(synopsis "Constrained nonlinear optimization")
(description
@@ -22203,18 +21581,18 @@ allowed.")
(properties `((upstream-name . "GDINA")))
(build-system r-build-system)
(propagated-inputs
- `(("r-alabama" ,r-alabama)
- ("r-ggplot2" ,r-ggplot2)
- ("r-mass" ,r-mass)
- ("r-nloptr" ,r-nloptr)
- ("r-numderiv" ,r-numderiv)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-rsolnp" ,r-rsolnp)
- ("r-shiny" ,r-shiny)
- ("r-shinydashboard" ,r-shinydashboard)))
+ (list r-alabama
+ r-ggplot2
+ r-mass
+ r-nloptr
+ r-numderiv
+ r-rcpp
+ r-rcpparmadillo
+ r-rsolnp
+ r-shiny
+ r-shinydashboard))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/Wenchao-Ma/GDINA")
(synopsis "Generalized DINA model framework")
(description
@@ -22245,10 +21623,9 @@ be conducted. A graphical user interface is also provided.")
(properties `((upstream-name . "ACTCD")))
(build-system r-build-system)
(propagated-inputs
- `(("r-gdina" ,r-gdina)
- ("r-r-methodss3" ,r-r-methodss3)))
+ (list r-gdina r-r-methodss3))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/ACTCD/")
(synopsis "Asymptotic classification theory for cognitive diagnosis")
(description
@@ -22296,11 +21673,7 @@ poverty measures. It provides both empirical and theoretical Lorenz curves.")
(properties `((upstream-name . "ActFrag")))
(build-system r-build-system)
(propagated-inputs
- `(("r-accelerometry" ,r-accelerometry)
- ("r-dplyr" ,r-dplyr)
- ("r-ineq" ,r-ineq)
- ("r-survival" ,r-survival)
- ("r-tidyr" ,r-tidyr)))
+ (list r-accelerometry r-dplyr r-ineq r-survival r-tidyr))
(home-page "https://github.com/junruidi/ActFrag")
(synopsis "Activity fragmentation metrics extraction")
(description
@@ -22322,7 +21695,7 @@ actigraphy-measured activity counts data.")
"1ay2a2agdmiz7zzvn26mli0x0iwk09g5pp4yy1r23knhkp1pn2lb"))))
(properties `((upstream-name . "ash")))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/web/packages/ash/")
(synopsis "David Scott's ASH routines")
(description
@@ -22344,13 +21717,13 @@ R.")
(properties `((upstream-name . "hdrcde")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ash" ,r-ash)
- ("r-ggplot2" ,r-ggplot2)
- ("r-kernsmooth" ,r-kernsmooth)
- ("r-ks" ,r-ks)
- ("r-locfit" ,r-locfit)
- ("r-rcolorbrewer" ,r-rcolorbrewer)))
- (native-inputs `(("gfortran" ,gfortran)))
+ (list r-ash
+ r-ggplot2
+ r-kernsmooth
+ r-ks
+ r-locfit
+ r-rcolorbrewer))
+ (native-inputs (list gfortran))
(home-page "http://pkg.robjhyndman.com/hdrcde")
(synopsis "Highest density regions and conditional density estimation")
(description
@@ -22373,12 +21746,12 @@ conditional on one covariate, and multimodal regression.")
(properties `((upstream-name . "rainbow")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cluster" ,r-cluster)
- ("r-colorspace" ,r-colorspace)
- ("r-hdrcde" ,r-hdrcde)
- ("r-ks" ,r-ks)
- ("r-mass" ,r-mass)
- ("r-pcapp" ,r-pcapp)))
+ (list r-cluster
+ r-colorspace
+ r-hdrcde
+ r-ks
+ r-mass
+ r-pcapp))
(home-page "https://cran.r-project.org/web/packages/rainbow/")
(synopsis "Bagplots, boxplots and rainbow plots for functional data")
(description
@@ -22400,8 +21773,7 @@ functional outliers with bagplots, boxplots and rainbow plots.")
(properties `((upstream-name . "fds")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rainbow" ,r-rainbow)
- ("r-rcurl" ,r-rcurl)))
+ (list r-rainbow r-rcurl))
(home-page "https://cran.r-project.org/web/packages/fds/")
(synopsis "Functional data sets")
(description "This package contains a list of functional time series,
@@ -22425,9 +21797,7 @@ variable observed over time.")
(properties `((upstream-name . "fda")))
(build-system r-build-system)
(propagated-inputs
- `(("r-desolve" ,r-desolve)
- ("r-fds" ,r-fds)
- ("r-matrix" ,r-matrix)))
+ (list r-desolve r-fds r-matrix))
(home-page "https://www.functionaldata.org")
(synopsis "Functional data analysis")
(description
@@ -22451,7 +21821,7 @@ examples.")
(properties `((upstream-name . "Actigraphy")))
(build-system r-build-system)
(propagated-inputs
- `(("r-fda" ,r-fda)))
+ (list r-fda))
(home-page "https://cran.r-project.org/web/packages/Actigraphy/")
(synopsis "Actigraphy data analysis")
(description
@@ -22473,7 +21843,7 @@ of actigraphy data.")
(properties `((upstream-name . "ActiveDriver")))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)))
+ (list r-mass))
(home-page "https://cran.r-project.org/web/packages/ActiveDriver/")
(synopsis "Tools for finding cancer driver proteins")
(description
@@ -22502,11 +21872,7 @@ known drivers.")
`((upstream-name . "activityCounts")))
(build-system r-build-system)
(propagated-inputs
- `(("r-lubridate" ,r-lubridate)
- ("r-magrittr" ,r-magrittr)
- ("r-seewave" ,r-seewave)
- ("r-signal" ,r-signal)
- ("r-tibble" ,r-tibble)))
+ (list r-lubridate r-magrittr r-seewave r-signal r-tibble))
(home-page "https://github.com/walkabillylab/activityCounts")
(synopsis "Generate ActiLife counts")
(description
@@ -22533,11 +21899,9 @@ data for different accelerometer brands.")
(properties `((upstream-name . "ActivityIndex")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-matrixstats" ,r-matrixstats)
- ("r-r-utils" ,r-r-utils)))
+ (list r-data-table r-matrixstats r-r-utils))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/ActivityIndex/")
(synopsis "Activity Index calculation using raw accelerometry data")
(description
@@ -22560,12 +21924,12 @@ al. (2016) @url{doi:10.1371/journal.pone.0160644}.")
(properties `((upstream-name . "activPAL")))
(build-system r-build-system)
(propagated-inputs
- `(("r-devtools" ,r-devtools)
- ("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-lubridate" ,r-lubridate)
- ("r-magrittr" ,r-magrittr)
- ("r-tidyr" ,r-tidyr)))
+ (list r-devtools
+ r-dplyr
+ r-ggplot2
+ r-lubridate
+ r-magrittr
+ r-tidyr))
(home-page "https://cran.r-project.org/web/packages/activPAL")
(synopsis "Processing and chart generation from activPAL events files")
(description
@@ -22592,7 +21956,7 @@ sets, such as sleep diaries and continuous glucose monitoring data.")
`((upstream-name . "activpalProcessing")))
(build-system r-build-system)
(propagated-inputs
- `(("r-chron" ,r-chron)))
+ (list r-chron))
(home-page "https://cran.r-project.org/web/packages/activpalProcessing/")
(synopsis "Process activPAL events files")
(description
@@ -22615,11 +21979,7 @@ behavior variables from activPAL events files.")
(properties `((upstream-name . "actogrammr")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-lubridate" ,r-lubridate)
- ("r-readr" ,r-readr)
- ("r-tidyr" ,r-tidyr)))
+ (list r-dplyr r-ggplot2 r-lubridate r-readr r-tidyr))
(home-page "https://cran.r-project.org/web/packages/actogrammr/")
(synopsis "Read in activity data and plot actograms")
(description
@@ -22666,7 +22026,7 @@ API; see the package vignette for details.")
"015brjjgmkwmjajdjdw8gs02jrd96if425pk9a97d499hzsq3xds"))))
(properties `((upstream-name . "actuar")))
(build-system r-build-system)
- (propagated-inputs `(("r-expint" ,r-expint)))
+ (propagated-inputs (list r-expint))
(home-page "https://gitlab.com/vigou3/actuar")
(synopsis "Actuarial functions and heavy tailed distributions")
(description
@@ -22718,10 +22078,7 @@ currently limited to 8 bit greyscale images and 24, 32 bit (A)RGB images.")
`(("libjpeg" ,libjpeg-turbo)
("libpng" ,libpng)))
(propagated-inputs
- `(("r-bmp" ,r-bmp)
- ("r-jpeg" ,r-jpeg)
- ("r-png" ,r-png)
- ("r-tiff" ,r-tiff)))
+ (list r-bmp r-jpeg r-png r-tiff))
(home-page "https://github.com/jefferis/readbitmap")
(synopsis "Unified interface to read bitmap images (BMP, JPEG, PNG, TIFF)")
(description
@@ -22744,23 +22101,19 @@ number embedded in the file rather than the file extension.")
(properties `((upstream-name . "imager")))
(build-system r-build-system)
(inputs
- `(("fftw" ,fftw)
- ("libtiff" ,libtiff)
- ("libx11" ,libx11)
- ("zlib" ,zlib)))
- (propagated-inputs
- `(("r-downloader" ,r-downloader)
- ("r-igraph" ,r-igraph)
- ("r-jpeg" ,r-jpeg)
- ("r-magrittr" ,r-magrittr)
- ("r-png" ,r-png)
- ("r-purrr" ,r-purrr)
- ("r-rcpp" ,r-rcpp)
- ("r-readbitmap" ,r-readbitmap)
- ("r-stringr" ,r-stringr)))
- (native-inputs
- `(("pkg-config" ,pkg-config)
- ("r-knitr" ,r-knitr)))
+ (list fftw libtiff libx11 zlib))
+ (propagated-inputs
+ (list r-downloader
+ r-igraph
+ r-jpeg
+ r-magrittr
+ r-png
+ r-purrr
+ r-rcpp
+ r-readbitmap
+ r-stringr))
+ (native-inputs
+ (list pkg-config r-knitr))
(home-page "https://dahtah.github.io/imager/")
(synopsis "Image processing library")
(description
@@ -22786,9 +22139,7 @@ simple, modern C++ library for image processing.")
(properties `((upstream-name . "AcuityView")))
(build-system r-build-system)
(propagated-inputs
- `(("r-fftwtools" ,r-fftwtools)
- ("r-imager" ,r-imager)
- ("r-plotrix" ,r-plotrix)))
+ (list r-fftwtools r-imager r-plotrix))
(home-page "https://cran.r-project.org/web/packages/AcuityView/")
(synopsis "Display scenes as seen by an animal with less acute vision")
(description
@@ -22809,19 +22160,19 @@ it may be seen by an animal with less acute vision.")
"1g36m06hp2fxxwv155bwbqlf97xhcia1lmg3axg6d74kgpns8lg8"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-e1071" ,r-e1071)
- ("r-foreach" ,r-foreach)
- ("r-ggplot2" ,r-ggplot2)
- ("r-lattice" ,r-lattice)
- ("r-modelmetrics" ,r-modelmetrics)
- ("r-nlme" ,r-nlme)
- ("r-plyr" ,r-plyr)
- ("r-proc" ,r-proc)
- ("r-recipes" ,r-recipes)
- ("r-reshape2" ,r-reshape2)
- ("r-withr" ,r-withr)))
+ (list r-e1071
+ r-foreach
+ r-ggplot2
+ r-lattice
+ r-modelmetrics
+ r-nlme
+ r-plyr
+ r-proc
+ r-recipes
+ r-reshape2
+ r-withr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/topepo/caret")
(synopsis "Classification and regression training")
(description
@@ -22843,10 +22194,7 @@ classification and regression models.")
(properties `((upstream-name . "adabag")))
(build-system r-build-system)
(propagated-inputs
- `(("r-caret" ,r-caret)
- ("r-doparallel" ,r-doparallel)
- ("r-foreach" ,r-foreach)
- ("r-rpart" ,r-rpart)))
+ (list r-caret r-doparallel r-foreach r-rpart))
(home-page "https://cran.r-project.org/web/packages/adabag/")
(synopsis "Multiclass AdaBoost.M1, SAMME and Bagging")
(description
@@ -22871,7 +22219,7 @@ done.")
(properties `((upstream-name . "adagio")))
(build-system r-build-system)
(propagated-inputs
- `(("r-lpsolve" ,r-lpsolve)))
+ (list r-lpsolve))
(home-page "https://cran.r-project.org/web/packages/adagio/")
(synopsis "Discrete and global optimization routines")
(description
@@ -22895,8 +22243,7 @@ functions.")
(properties `((upstream-name . "univOutl")))
(build-system r-build-system)
(propagated-inputs
- `(("r-hmisc" ,r-hmisc)
- ("r-robustbase" ,r-robustbase)))
+ (list r-hmisc r-robustbase))
(home-page "https://github.com/marcellodo/univOutl")
(synopsis "Detection of univariate outliers")
(description
@@ -22921,8 +22268,7 @@ used in outliers detection.")
(properties `((upstream-name . "tolerance")))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)
- ("r-rgl" ,r-rgl)))
+ (list r-mass r-rgl))
(home-page "https://cran.r-project.org/web/packages/tolerance/")
(synopsis "Statistical tolerance intervals and regions")
(description
@@ -22973,9 +22319,7 @@ Johnson-Graybill, LBI, Tusell and modified Tukey non-additivity tests.")
(properties `((upstream-name . "flexclust")))
(build-system r-build-system)
(propagated-inputs
- `(("r-class" ,r-class)
- ("r-lattice" ,r-lattice)
- ("r-modeltools" ,r-modeltools)))
+ (list r-class r-lattice r-modeltools))
(home-page "https://cran.r-project.org/web/packages/flexclust/")
(synopsis "Flexible cluster algorithms")
(description
@@ -23002,13 +22346,13 @@ cluster stability.")
(properties `((upstream-name . "biclust")))
(build-system r-build-system)
(propagated-inputs
- `(("r-additivitytests" ,r-additivitytests)
- ("r-colorspace" ,r-colorspace)
- ("r-flexclust" ,r-flexclust)
- ("r-ggplot2" ,r-ggplot2)
- ("r-lattice" ,r-lattice)
- ("r-mass" ,r-mass)
- ("r-tidyr" ,r-tidyr)))
+ (list r-additivitytests
+ r-colorspace
+ r-flexclust
+ r-ggplot2
+ r-lattice
+ r-mass
+ r-tidyr))
(home-page "https://cran.r-project.org/web/packages/biclust/")
(synopsis "BiCluster algorithms")
(description
@@ -23033,9 +22377,7 @@ validation of bicluster solutions.")
(properties `((upstream-name . "ICGE")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cluster" ,r-cluster)
- ("r-fastcluster" ,r-fastcluster)
- ("r-mass" ,r-mass)))
+ (list r-cluster r-fastcluster r-mass))
(home-page "https://cran.r-project.org/web/packages/ICGE/")
(synopsis "Cluster estimation and identification of atypical units")
(description
@@ -23058,11 +22400,9 @@ on distances rather than on unit x variables.")
(properties `((upstream-name . "depth")))
(build-system r-build-system)
(propagated-inputs
- `(("r-abind" ,r-abind)
- ("r-circular" ,r-circular)
- ("r-rgl" ,r-rgl)))
+ (list r-abind r-circular r-rgl))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/depth/")
(synopsis "Nonparametric depth functions for multivariate analysis")
(description
@@ -23087,8 +22427,7 @@ spherical depths are supported.")
(properties `((upstream-name . "archetypes")))
(build-system r-build-system)
(propagated-inputs
- `(("r-modeltools" ,r-modeltools)
- ("r-nnls" ,r-nnls)))
+ (list r-modeltools r-nnls))
(home-page "https://cran.r-project.org/web/packages/archetypes")
(synopsis "Archetypal analysis")
(description
@@ -23111,10 +22450,7 @@ different conceptual parts of the algorithm.")
(properties `((upstream-name . "shapes")))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)
- ("r-minpack-lm" ,r-minpack-lm)
- ("r-rgl" ,r-rgl)
- ("r-scatterplot3d" ,r-scatterplot3d)))
+ (list r-mass r-minpack-lm r-rgl r-scatterplot3d))
(home-page "http://www.maths.nottingham.ac.uk/~ild/shapes")
(synopsis "Statistical shape analysis")
(description
@@ -23140,17 +22476,17 @@ Edition), John Wiley and Sons.")
(properties `((upstream-name . "Anthropometry")))
(build-system r-build-system)
(propagated-inputs
- `(("r-archetypes" ,r-archetypes)
- ("r-biclust" ,r-biclust)
- ("r-cluster" ,r-cluster)
- ("r-depth" ,r-depth)
- ("r-fnn" ,r-fnn)
- ("r-icge" ,r-icge)
- ("r-nnls" ,r-nnls)
- ("r-rgl" ,r-rgl)
- ("r-shapes" ,r-shapes)))
+ (list r-archetypes
+ r-biclust
+ r-cluster
+ r-depth
+ r-fnn
+ r-icge
+ r-nnls
+ r-rgl
+ r-shapes))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/Anthropometry/")
(synopsis "Statistical methods for anthropometric data")
(description
@@ -23175,13 +22511,13 @@ statistical shape analysis and archetypal analysis.")
(properties `((upstream-name . "adamethods")))
(build-system r-build-system)
(propagated-inputs
- `(("r-anthropometry" ,r-anthropometry)
- ("r-archetypes" ,r-archetypes)
- ("r-fnn" ,r-fnn)
- ("r-foreach" ,r-foreach)
- ("r-nnls" ,r-nnls)
- ("r-tolerance" ,r-tolerance)
- ("r-univoutl" ,r-univoutl)))
+ (list r-anthropometry
+ r-archetypes
+ r-fnn
+ r-foreach
+ r-nnls
+ r-tolerance
+ r-univoutl))
(home-page "https://cran.r-project.org/web/packages/adamethods/")
(synopsis "Archetypoid algorithms and anomaly detection")
(description
@@ -23205,7 +22541,7 @@ these algorithms also detect anomalies (outliers).")
(properties `((upstream-name . "IDPmisc")))
(build-system r-build-system)
(propagated-inputs
- `(("r-lattice" ,r-lattice)))
+ (list r-lattice))
(home-page "https://cran.r-project.org/web/packages/IDPmisc/")
(synopsis "Functions for data analyses and visualization")
(description
@@ -23234,9 +22570,9 @@ finding peaks in spectra, converting humidity measures.")
(properties `((upstream-name . "qqman")))
(build-system r-build-system)
(propagated-inputs
- `(("r-calibrate" ,r-calibrate)))
+ (list r-calibrate))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/qqman/")
(synopsis "Q-Q and Manhattan plots for GWAS data")
(description
@@ -23259,10 +22595,7 @@ from PLINK results.")
`((upstream-name . "ggplot.multistats")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-hexbin" ,r-hexbin)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)))
+ (list r-ggplot2 r-hexbin r-rlang r-scales))
(home-page "https://github.com/flying-sheep/ggplot.multistats")
(synopsis "Multiple summary statistics for binned stats/geometries")
(description
@@ -23286,9 +22619,7 @@ aesthetics.")
(properties `((upstream-name . "knn.covertree")))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)))
+ (list r-matrix r-rcpp r-rcppeigen))
(home-page "https://github.com/flying-sheep/knn.covertree")
(synopsis "Accurate kNN Implementation with multiple distance measures")
(description
@@ -23335,7 +22666,7 @@ generation for the Poisson binomial distribution.")
(properties `((upstream-name . "diagram")))
(build-system r-build-system)
(propagated-inputs
- `(("r-shape" ,r-shape)))
+ (list r-shape))
(home-page "https://cran.r-project.org/web/packages/diagram/")
(synopsis "Visualize simple graphs (networks) and plot flow diagrams")
(description
@@ -23362,8 +22693,7 @@ Francesca Mazzia (2012).")
(properties `((upstream-name . "LIM")))
(build-system r-build-system)
(propagated-inputs
- `(("r-diagram" ,r-diagram)
- ("r-limsolve" ,r-limsolve)))
+ (list r-diagram r-limsolve))
(home-page "https://cran.r-project.org/web/packages/LIM/")
(synopsis "Linear inverse model examples and solution methods")
(description
@@ -23386,9 +22716,7 @@ problems (food web problems, linear programming problems).")
`((upstream-name . "shinycssloaders")))
(build-system r-build-system)
(propagated-inputs
- `(("r-digest" ,r-digest)
- ("r-glue" ,r-glue)
- ("r-shiny" ,r-shiny)))
+ (list r-digest r-glue r-shiny))
(home-page "https://github.com/andrewsali/shinycssloaders")
(synopsis "Add CSS loading animations to Shiny outputs")
(description
@@ -23412,11 +22740,9 @@ automatically show a loader when the output is (re)calculating.")
(properties `((upstream-name . "rsvg")))
(build-system r-build-system)
(inputs
- `(("librsvg" ,librsvg)
- ("zlib" ,zlib)))
+ (list librsvg zlib))
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("r-knitr" ,r-knitr)))
+ (list pkg-config r-knitr))
(home-page "https://github.com/jeroen/rsvg#readme")
(synopsis "Render SVG images into PDF, PNG, PostScript, or Bitmap arrays")
(description
@@ -23441,8 +22767,7 @@ PDF or PostScript.")
(properties `((upstream-name . "influenceR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-igraph" ,r-igraph)
- ("r-matrix" ,r-matrix)))
+ (list r-igraph r-matrix))
(home-page "https://github.com/rcc-uchicago/influenceR")
(synopsis "Tools to quantify structural importance of nodes in a network")
(description
@@ -23469,7 +22794,7 @@ OpenMP.")
(properties `((upstream-name . "emplik")))
(build-system r-build-system)
(propagated-inputs
- `(("r-quantreg" ,r-quantreg)))
+ (list r-quantreg))
(home-page "https://www.ms.uky.edu/~mai/EmpLik.html")
(synopsis "Empirical likelihood ratio for censored/truncated data")
(description
@@ -23492,11 +22817,7 @@ does regression.")
(properties `((upstream-name . "imputeYn")))
(build-system r-build-system)
(propagated-inputs
- `(("r-boot" ,r-boot)
- ("r-emplik" ,r-emplik)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-quadprog" ,r-quadprog)
- ("r-survival" ,r-survival)))
+ (list r-boot r-emplik r-mvtnorm r-quadprog r-survival))
(home-page "https://cran.r-project.org/web/packages/imputeYn/")
(synopsis "Impute last largest censored observation under weighted least squares")
(description
@@ -23519,10 +22840,7 @@ AFT models.")
(properties `((upstream-name . "AdapEnetClass")))
(build-system r-build-system)
(propagated-inputs
- `(("r-glmnet" ,r-glmnet)
- ("r-imputeyn" ,r-imputeyn)
- ("r-lars" ,r-lars)
- ("r-quadprog" ,r-quadprog)))
+ (list r-glmnet r-imputeyn r-lars r-quadprog))
(home-page "https://cran.r-project.org/web/packages/AdapEnetClass/")
(synopsis "Class of adaptive elastic net methods for censored data")
(description
@@ -23542,7 +22860,7 @@ AFT models.")
"1zg93p74icj4bhxnmnssj2xp6vw4yaksyavq03497v33xfpdxss7"))))
(properties `((upstream-name . "flock")))
(build-system r-build-system)
- (propagated-inputs `(("r-rcpp" ,r-rcpp)))
+ (propagated-inputs (list r-rcpp))
(home-page "https://cran.r-project.org/web/packages/flock/")
(synopsis "Process synchronization using file locks")
(description
@@ -23565,16 +22883,16 @@ both exclusive and shared locking.")
(properties `((upstream-name . "archivist")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dbi" ,r-dbi)
- ("r-digest" ,r-digest)
- ("r-flock" ,r-flock)
- ("r-httr" ,r-httr)
- ("r-lubridate" ,r-lubridate)
- ("r-magrittr" ,r-magrittr)
- ("r-rcurl" ,r-rcurl)
- ("r-rsqlite" ,r-rsqlite)))
+ (list r-dbi
+ r-digest
+ r-flock
+ r-httr
+ r-lubridate
+ r-magrittr
+ r-rcurl
+ r-rsqlite))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://pbiecek.github.io/archivist/")
(synopsis "Tools for storing, restoring and searching for R objects")
(description
@@ -23624,21 +22942,21 @@ versions of currently installed packages.")
(properties `((upstream-name . "adapr")))
(build-system r-build-system)
(propagated-inputs
- `(("r-archivist" ,r-archivist)
- ("r-devtools" ,r-devtools)
- ("r-digest" ,r-digest)
- ("r-doparallel" ,r-doparallel)
- ("r-gdata" ,r-gdata)
- ("r-ggplot2" ,r-ggplot2)
- ("r-git2r" ,r-git2r)
- ("r-igraph" ,r-igraph)
- ("r-knitr" ,r-knitr)
- ("r-plotly" ,r-plotly)
- ("r-plyr" ,r-plyr)
- ("r-rmarkdown" ,r-rmarkdown)
- ("r-shiny" ,r-shiny)
- ("r-shinydashboard" ,r-shinydashboard)
- ("r-versions" ,r-versions)))
+ (list r-archivist
+ r-devtools
+ r-digest
+ r-doparallel
+ r-gdata
+ r-ggplot2
+ r-git2r
+ r-igraph
+ r-knitr
+ r-plotly
+ r-plyr
+ r-rmarkdown
+ r-shiny
+ r-shinydashboard
+ r-versions))
(home-page "https://cran.r-project.org/web/packages/adapr/")
(synopsis "Implementation of an accountable data analysis process")
(description
@@ -23661,7 +22979,7 @@ histories of inputs and outputs.")
"1jayjrsiib2ij4rxxj59g71r3xhzl5yqh0lhi8k6cfy03i7dkvis"))))
(properties `((upstream-name . "AdapSamp")))
(build-system r-build-system)
- (propagated-inputs `(("r-pracma" ,r-pracma)))
+ (propagated-inputs (list r-pracma))
(home-page "https://cran.r-project.org/web/packages/AdapSamp/")
(synopsis "Adaptive sampling algorithms")
(description
@@ -23689,9 +23007,7 @@ above.")
(properties `((upstream-name . "adaptalint")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-lintr" ,r-lintr)
- ("r-purrr" ,r-purrr)))
+ (list r-dplyr r-lintr r-purrr))
(home-page "https://cran.r-project.org/web/packages/adaptalint/")
(synopsis "Check R code style")
(description
@@ -23737,20 +23053,20 @@ Raftery, Appl.Statistics, 1989); it includes inference and basic methods.")
(properties `((upstream-name . "forecast")))
(build-system r-build-system)
(propagated-inputs
- `(("r-colorspace" ,r-colorspace)
- ("r-fracdiff" ,r-fracdiff)
- ("r-ggplot2" ,r-ggplot2)
- ("r-lmtest" ,r-lmtest)
- ("r-magrittr" ,r-magrittr)
- ("r-nnet" ,r-nnet)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-timedate" ,r-timedate)
- ("r-tseries" ,r-tseries)
- ("r-urca" ,r-urca)
- ("r-zoo" ,r-zoo)))
- (native-inputs
- `(("r-knitr" ,r-knitr))) ; needed for vignettes
+ (list r-colorspace
+ r-fracdiff
+ r-ggplot2
+ r-lmtest
+ r-magrittr
+ r-nnet
+ r-rcpp
+ r-rcpparmadillo
+ r-timedate
+ r-tseries
+ r-urca
+ r-zoo))
+ (native-inputs
+ (list r-knitr)) ; needed for vignettes
(home-page "https://pkg.robjhyndman.com/forecast/")
(synopsis "Forecasting functions for time series and linear models")
(description
@@ -23772,12 +23088,9 @@ space models and automatic ARIMA modelling.")
(properties `((upstream-name . "formattable")))
(build-system r-build-system)
(propagated-inputs
- `(("r-htmltools" ,r-htmltools)
- ("r-htmlwidgets" ,r-htmlwidgets)
- ("r-lifecycle" ,r-lifecycle)
- ("r-rmarkdown" ,r-rmarkdown)))
+ (list r-htmltools r-htmlwidgets r-lifecycle r-rmarkdown))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/renkun-ken/formattable")
(synopsis "Print vectors and data frames with text fromatting")
(description
@@ -23824,10 +23137,7 @@ programming} (OOP) using R Reference Class.")
(properties `((upstream-name . "proxyC")))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-rcppparallel" ,r-rcppparallel)))
+ (list r-matrix r-rcpp r-rcpparmadillo r-rcppparallel))
(home-page "https://cran.r-project.org/package=proxyC")
(synopsis "Compute proximity in large sparse matrices")
(description
@@ -23874,7 +23184,7 @@ character codes as well as the UN M.49 area codes.")
(properties `((upstream-name . "stopwords")))
(build-system r-build-system)
(propagated-inputs
- `(("r-isocodes" ,r-isocodes)))
+ (list r-isocodes))
(home-page "https://github.com/quanteda/stopwords")
(synopsis "Multilingual stopword lists")
(description
@@ -23896,8 +23206,7 @@ analysis and natural language processing.")
(properties `((upstream-name . "spacyr")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-reticulate" ,r-reticulate)))
+ (list r-data-table r-reticulate))
(home-page "https://spacyr.quanteda.io")
(synopsis "R wrapper for the spaCy NLP library")
(description
@@ -23942,19 +23251,19 @@ Norwegian, Portuguese, Romanian, Russian, Spanish, Swedish and Turkish.")
(properties `((upstream-name . "quanteda")))
(build-system r-build-system)
(propagated-inputs
- `(("r-fastmatch" ,r-fastmatch)
- ("r-magrittr" ,r-magrittr)
- ("r-matrix" ,r-matrix)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-rcppparallel" ,r-rcppparallel)
- ("r-snowballc" ,r-snowballc)
- ("r-stopwords" ,r-stopwords)
- ("r-stringi" ,r-stringi)
- ("r-xml2" ,r-xml2)
- ("r-yaml" ,r-yaml)))
+ (list r-fastmatch
+ r-magrittr
+ r-matrix
+ r-rcpp
+ r-rcpparmadillo
+ r-rcppparallel
+ r-snowballc
+ r-stopwords
+ r-stringi
+ r-xml2
+ r-yaml))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://quanteda.io")
(synopsis "Quantitative analysis of textual data")
(description
@@ -23981,11 +23290,9 @@ machine learning, visually representing text and text analyses, and more.")
(properties `((upstream-name . "topicmodels")))
(build-system r-build-system)
(inputs
- `(("gsl" ,gsl)))
+ (list gsl))
(propagated-inputs
- `(("r-modeltools" ,r-modeltools)
- ("r-slam" ,r-slam)
- ("r-tm" ,r-tm)))
+ (list r-modeltools r-slam r-tm))
(home-page "https://cran.r-project.org/package=topicmodels")
(synopsis "Topic models")
(description
@@ -24009,17 +23316,17 @@ Gibbs sampling by Xuan-Hieu Phan and co-authors.")
(properties `((upstream-name . "stm")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-glmnet" ,r-glmnet)
- ("r-lda" ,r-lda)
- ("r-matrix" ,r-matrix)
- ("r-matrixstats" ,r-matrixstats)
- ("r-quadprog" ,r-quadprog)
- ("r-quanteda" ,r-quanteda)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-slam" ,r-slam)
- ("r-stringr" ,r-stringr)))
+ (list r-data-table
+ r-glmnet
+ r-lda
+ r-matrix
+ r-matrixstats
+ r-quadprog
+ r-quanteda
+ r-rcpp
+ r-rcpparmadillo
+ r-slam
+ r-stringr))
(home-page "http://www.structuraltopicmodel.com/")
(synopsis "Estimation of the Structural Topic Model")
(description
@@ -24043,8 +23350,7 @@ regressions.")
(properties `((upstream-name . "polycor")))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)
- ("r-mvtnorm" ,r-mvtnorm)))
+ (list r-matrix r-mvtnorm))
(home-page "https://r-forge.r-project.org/projects/polycor/")
(synopsis "Polychoric and polyserial correlations")
(description
@@ -24067,9 +23373,7 @@ errors; tetrachoric and biserial correlations are special cases.")
(properties `((upstream-name . "msm")))
(build-system r-build-system)
(propagated-inputs
- `(("r-expm" ,r-expm)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-survival" ,r-survival)))
+ (list r-expm r-mvtnorm r-survival))
(home-page "https://github.com/chjackson/msm")
(synopsis "Multi-state Markov and hidden Markov models in continuous time")
(description
@@ -24095,9 +23399,7 @@ be constant or piecewise-constant in time.")
(properties `((upstream-name . "ltm")))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)
- ("r-msm" ,r-msm)
- ("r-polycor" ,r-polycor)))
+ (list r-mass r-msm r-polycor))
(home-page "https://github.com/drizopoulos/ltm")
(synopsis "Latent trait models under IRT")
(description
@@ -24122,8 +23424,7 @@ Models.")
(properties `((upstream-name . "mi")))
(build-system r-build-system)
(propagated-inputs
- `(("r-arm" ,r-arm)
- ("r-matrix" ,r-matrix)))
+ (list r-arm r-matrix))
(home-page "http://www.stat.columbia.edu/~gelman/")
(synopsis "Missing data imputation and model checking")
(description
@@ -24170,9 +23471,7 @@ actuarial models such as pension mathematics.")
(properties `((upstream-name . "sem")))
(build-system r-build-system)
(propagated-inputs
- `(("r-boot" ,r-boot)
- ("r-mass" ,r-mass)
- ("r-mi" ,r-mi)))
+ (list r-boot r-mass r-mi))
(home-page "https://cran.r-project.org/package=sem")
(synopsis "Structural equation models")
(description
@@ -24196,8 +23495,7 @@ least squares.")
(properties `((upstream-name . "semTools")))
(build-system r-build-system)
(propagated-inputs
- `(("r-lavaan" ,r-lavaan)
- ("r-pbivnorm" ,r-pbivnorm)))
+ (list r-lavaan r-pbivnorm))
(home-page "https://github.com/simsem/semTools/wiki")
(synopsis "Useful tools for structural equation modeling")
(description
@@ -24218,12 +23516,9 @@ least squares.")
(properties `((upstream-name . "regsem")))
(build-system r-build-system)
(propagated-inputs
- `(("r-lavaan" ,r-lavaan)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-rsolnp" ,r-rsolnp)))
+ (list r-lavaan r-rcpp r-rcpparmadillo r-rsolnp))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/package=regsem")
(synopsis "Regularized structural equation modeling")
(description
@@ -24247,13 +23542,11 @@ perform @dfn{exploratory mediation} (XMed).")
"0srkyawyiykn3p5lw1z3zf18s4ax4iasv1ci3l1px40f9w36wm17"))))
(properties `((upstream-name . "StanHeaders")))
(build-system r-build-system)
- (inputs `(("pandoc" ,pandoc)))
+ (inputs (list pandoc))
(propagated-inputs
- `(("r-rcppeigen" ,r-rcppeigen)
- ("r-rcppparallel" ,r-rcppparallel)))
+ (list r-rcppeigen r-rcppparallel))
(native-inputs
- `(("gfortran" ,gfortran)
- ("r-knitr" ,r-knitr))) ; for vignettes
+ (list gfortran r-knitr)) ; for vignettes
(home-page "https://mc-stan.org/")
(synopsis "C++ header files for Stan")
(description
@@ -24289,12 +23582,9 @@ and analyze Stan models.")
(properties `((upstream-name . "rpf")))
(build-system r-build-system)
(propagated-inputs
- `(("r-lifecycle" ,r-lifecycle)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)))
+ (list r-lifecycle r-mvtnorm r-rcpp r-rcppeigen))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/jpritikin/rpf")
(synopsis "Response probability functions")
(description
@@ -24319,17 +23609,17 @@ Complete access to optimized C functions is made available with
(properties `((upstream-name . "OpenMx")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bh" ,r-bh)
- ("r-digest" ,r-digest)
- ("r-lifecycle" ,r-lifecycle)
- ("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)
- ("r-rcppparallel" ,r-rcppparallel)
- ("r-rpf" ,r-rpf)
- ("r-stanheaders" ,r-stanheaders)))
- (native-inputs `(("gfortran" ,gfortran)))
+ (list r-bh
+ r-digest
+ r-lifecycle
+ r-mass
+ r-matrix
+ r-rcpp
+ r-rcppeigen
+ r-rcppparallel
+ r-rpf
+ r-stanheaders))
+ (native-inputs (list gfortran))
(home-page "http://openmx.ssri.psu.edu")
(synopsis "Extended structural equation modelling")
(description
@@ -24353,11 +23643,7 @@ estimate parameters given observed data.")
(properties `((upstream-name . "kutils")))
(build-system r-build-system)
(propagated-inputs
- `(("r-foreign" ,r-foreign)
- ("r-openxlsx" ,r-openxlsx)
- ("r-plyr" ,r-plyr)
- ("r-runit" ,r-runit)
- ("r-xtable" ,r-xtable)))
+ (list r-foreign r-openxlsx r-plyr r-runit r-xtable))
(home-page "https://cran.r-project.org/package=kutils")
(synopsis "Project management tools")
(description
@@ -24383,10 +23669,7 @@ importation and recoding.")
(properties `((upstream-name . "rockchalk")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cardata" ,r-cardata)
- ("r-kutils" ,r-kutils)
- ("r-lme4" ,r-lme4)
- ("r-mass" ,r-mass)))
+ (list r-cardata r-kutils r-lme4 r-mass))
(home-page "https://cran.r-project.org/package=rockchalk")
(synopsis "Regression estimation and presentation")
(description
@@ -24433,7 +23716,7 @@ output in R.")
(properties `((upstream-name . "BDgraph")))
(build-system r-build-system)
(propagated-inputs
- `(("r-igraph" ,r-igraph)))
+ (list r-igraph))
(home-page "https://www.uva.nl/profile/a.mohammadi")
(synopsis "Bayesian structure learning in graphical models")
(description
@@ -24457,9 +23740,7 @@ on a continuous-time birth-death process.")
(properties `((upstream-name . "d3Network")))
(build-system r-build-system)
(propagated-inputs
- `(("r-plyr" ,r-plyr)
- ("r-rjson" ,r-rjson)
- ("r-whisker" ,r-whisker)))
+ (list r-plyr r-rjson r-whisker))
(home-page "http://christophergandrud.github.io/d3Network/")
(synopsis "Create D3 JavaScript network, tree, dendrogram, and Sankey graphs")
(description
@@ -24481,24 +23762,24 @@ network, tree, dendrogram, and Sankey graphs from R using data frames.")
(properties `((upstream-name . "qgraph")))
(build-system r-build-system)
(propagated-inputs
- `(("r-abind" ,r-abind)
- ("r-colorspace" ,r-colorspace)
- ("r-corpcor" ,r-corpcor)
- ("r-fdrtool" ,r-fdrtool)
- ("r-ggplot2" ,r-ggplot2)
- ("r-glasso" ,r-glasso)
- ("r-gtools" ,r-gtools)
- ("r-hmisc" ,r-hmisc)
- ("r-igraph" ,r-igraph)
- ("r-jpeg" ,r-jpeg)
- ("r-lavaan" ,r-lavaan)
- ("r-matrix" ,r-matrix)
- ("r-pbapply" ,r-pbapply)
- ("r-plyr" ,r-plyr)
- ("r-png" ,r-png)
- ("r-psych" ,r-psych)
- ("r-rcpp" ,r-rcpp)
- ("r-reshape2" ,r-reshape2)))
+ (list r-abind
+ r-colorspace
+ r-corpcor
+ r-fdrtool
+ r-ggplot2
+ r-glasso
+ r-gtools
+ r-hmisc
+ r-igraph
+ r-jpeg
+ r-lavaan
+ r-matrix
+ r-pbapply
+ r-plyr
+ r-png
+ r-psych
+ r-rcpp
+ r-reshape2))
(home-page "http://sachaepskamp.com/qgraph/")
(synopsis "Weighted network visualization and analysis")
(description
@@ -24523,18 +23804,18 @@ model estimation. See Epskamp et al. (2012)
(properties `((upstream-name . "semPlot")))
(build-system r-build-system)
(propagated-inputs
- `(("r-colorspace" ,r-colorspace)
- ("r-corpcor" ,r-corpcor)
- ("r-igraph" ,r-igraph)
- ("r-lavaan" ,r-lavaan)
- ("r-lisreltor" ,r-lisreltor)
- ("r-openmx" ,r-openmx)
- ("r-plyr" ,r-plyr)
- ("r-qgraph" ,r-qgraph)
- ("r-regsem" ,r-regsem)
- ("r-rockchalk" ,r-rockchalk)
- ("r-sem" ,r-sem)
- ("r-xml" ,r-xml)))
+ (list r-colorspace
+ r-corpcor
+ r-igraph
+ r-lavaan
+ r-lisreltor
+ r-openmx
+ r-plyr
+ r-qgraph
+ r-regsem
+ r-rockchalk
+ r-sem
+ r-xml))
(home-page "https://github.com/SachaEpskamp/semPlot")
(synopsis "Unified visualizations of structural equation models")
(description
@@ -24562,10 +23843,7 @@ translated to input syntax for the R packages @code{sem} and @code{lavaan}.")
(properties `((upstream-name . "CDM")))
(build-system r-build-system)
(propagated-inputs
- `(("r-mvtnorm" ,r-mvtnorm)
- ("r-polycor" ,r-polycor)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)))
+ (list r-mvtnorm r-polycor r-rcpp r-rcpparmadillo))
(home-page
"https://github.com/alexanderrobitzsch/CDM")
(synopsis "Cognitive diagnosis modeling")
@@ -24596,9 +23874,7 @@ well as Ravand and Robitzsch (2015).")
(properties `((upstream-name . "TAM")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cdm" ,r-cdm)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)))
+ (list r-cdm r-rcpp r-rcpparmadillo))
(home-page "http://www.edmeasurementsurveys.com/TAM/Tutorials/")
(synopsis "Test analysis modules")
(description
@@ -24625,12 +23901,8 @@ Latent regression models and plausible value imputation are also supported.")
(properties `((upstream-name . "eRm")))
(build-system r-build-system)
(propagated-inputs
- `(("r-colorspace" ,r-colorspace)
- ("r-lattice" ,r-lattice)
- ("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-psych" ,r-psych)))
- (native-inputs `(("gfortran" ,gfortran)))
+ (list r-colorspace r-lattice r-mass r-matrix r-psych))
+ (native-inputs (list gfortran))
(home-page "https://cran.r-project.org/package=eRm")
(synopsis "Extended Rasch modeling")
(description
@@ -24659,8 +23931,7 @@ elimination, and a simulation module for various binary data matrices.")
(properties `((upstream-name . "irtoys")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ltm" ,r-ltm)
- ("r-sm" ,r-sm)))
+ (list r-ltm r-sm))
(home-page "https://cran.r-project.org/package=irtoys")
(synopsis "Collection of functions related to Item Response Theory (IRT)")
(description
@@ -24689,16 +23960,16 @@ Haberman's interaction model when all items are dichotomously scored.")
(properties `((upstream-name . "iheatmapr")))
(build-system r-build-system)
(propagated-inputs
- `(("r-fastcluster" ,r-fastcluster)
- ("r-ggdendro" ,r-ggdendro)
- ("r-htmlwidgets" ,r-htmlwidgets)
- ("r-jsonlite" ,r-jsonlite)
- ("r-knitr" ,r-knitr)
- ("r-magrittr" ,r-magrittr)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-scales" ,r-scales)))
+ (list r-fastcluster
+ r-ggdendro
+ r-htmlwidgets
+ r-jsonlite
+ r-knitr
+ r-magrittr
+ r-rcolorbrewer
+ r-scales))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://docs.ropensci.org/iheatmapr")
(synopsis "Interactive, Complex Heatmaps")
(description
@@ -24748,13 +24019,13 @@ and reproducible way.")
(properties `((upstream-name . "rsconnect")))
(build-system r-build-system)
(propagated-inputs
- `(("r-curl" ,r-curl)
- ("r-digest" ,r-digest)
- ("r-jsonlite" ,r-jsonlite)
- ("r-openssl" ,r-openssl)
- ("r-packrat" ,r-packrat)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-yaml" ,r-yaml)))
+ (list r-curl
+ r-digest
+ r-jsonlite
+ r-openssl
+ r-packrat
+ r-rstudioapi
+ r-yaml))
(home-page "https://github.com/rstudio/rsconnect")
(synopsis "Deployment interface for R Markdown documents and Shiny applications")
(description
@@ -24827,11 +24098,7 @@ documents, Shiny applications, Plumber APIs, plots, and static web content.")
(base32
"01mdnsaibm9jy2f1qpbn692hpv309lhj5si9nagib4dawmrkffij"))))))
(propagated-inputs
- `(("r-htmltools" ,r-htmltools)
- ("r-htmlwidgets" ,r-htmlwidgets)
- ("r-magrittr" ,r-magrittr)
- ("r-xts" ,r-xts)
- ("r-zoo" ,r-zoo)))
+ (list r-htmltools r-htmlwidgets r-magrittr r-xts r-zoo))
(home-page "https://github.com/rstudio/dygraphs")
(synopsis "Interface to Dygraphs interactive time series charting library")
(description
@@ -24856,23 +24123,23 @@ series/point highlighting.")
(properties `((upstream-name . "shinystan")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bayesplot" ,r-bayesplot)
- ("r-colourpicker" ,r-colourpicker)
- ("r-dt" ,r-dt)
- ("r-dygraphs" ,r-dygraphs)
- ("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-gtools" ,r-gtools)
- ("r-markdown" ,r-markdown)
- ("r-reshape2" ,r-reshape2)
- ("r-rsconnect" ,r-rsconnect)
- ("r-rstan" ,r-rstan)
- ("r-shiny" ,r-shiny)
- ("r-shinyjs" ,r-shinyjs)
- ("r-shinythemes" ,r-shinythemes)
- ("r-threejs" ,r-threejs)
- ("r-xtable" ,r-xtable)
- ("r-xts" ,r-xts)))
+ (list r-bayesplot
+ r-colourpicker
+ r-dt
+ r-dygraphs
+ r-ggplot2
+ r-gridextra
+ r-gtools
+ r-markdown
+ r-reshape2
+ r-rsconnect
+ r-rstan
+ r-shiny
+ r-shinyjs
+ r-shinythemes
+ r-threejs
+ r-xtable
+ r-xts))
(home-page "https://mc-stan.org/")
(synopsis "Interactive visual and numerical analysis for Bayesian models")
(description
@@ -24897,13 +24164,11 @@ using the @code{rstan} and @code{rstanarm} packages).")
"0b9x8rzj3dr4m7yjx476nn42z22xd1xnw85m9frfwxy5ivg1any9"))))
(properties `((upstream-name . "rstantools")))
(build-system r-build-system)
- (inputs `(("pandoc" ,pandoc)))
+ (inputs (list pandoc))
(propagated-inputs
- `(("r-desc" ,r-desc)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppparallel" ,r-rcppparallel)))
+ (list r-desc r-rcpp r-rcppparallel))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://mc-stan.org/rstantools/")
(synopsis "Tools for developing R packages interfacing with Stan")
(description
@@ -24927,12 +24192,11 @@ recommendations for developers.")
(properties `((upstream-name . "loo")))
(build-system r-build-system)
(inputs
- `(("pandoc" ,pandoc)))
+ (list pandoc))
(propagated-inputs
- `(("r-checkmate" ,r-checkmate)
- ("r-matrixstats" ,r-matrixstats)))
+ (list r-checkmate r-matrixstats))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://mc-stan.org/loo/")
(synopsis "Leave-One-Out cross-validation and WAIC for Bayesian models")
(description
@@ -24971,22 +24235,20 @@ techniques to average Bayesian predictive distributions.")
(search-input-directory inputs
"share/zoneinfo")))))))
(native-inputs
- `(("tzdata" ,tzdata-for-tests)
- ("pandoc" ,pandoc)
- ("r-knitr" ,r-knitr)))
- (propagated-inputs
- `(("r-bh" ,r-bh)
- ("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-inline" ,r-inline)
- ("r-loo" ,r-loo)
- ("r-pkgbuild" ,r-pkgbuild)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)
- ("r-rcppparallel" ,r-rcppparallel)
- ("r-stanheaders" ,r-stanheaders)
- ("r-v8" ,r-v8)
- ("r-withr" ,r-withr)))
+ (list tzdata-for-tests pandoc r-knitr))
+ (propagated-inputs
+ (list r-bh
+ r-ggplot2
+ r-gridextra
+ r-inline
+ r-loo
+ r-pkgbuild
+ r-rcpp
+ r-rcppeigen
+ r-rcppparallel
+ r-stanheaders
+ r-v8
+ r-withr))
(home-page "https://discourse.mc-stan.org/")
(synopsis "R interface to Stan")
(description
@@ -25015,25 +24277,25 @@ need to derive the partial derivatives.")
(properties `((upstream-name . "rstanarm")))
(build-system r-build-system)
(inputs
- `(("pandoc" ,pandoc)))
- (propagated-inputs
- `(("r-bayesplot" ,r-bayesplot)
- ("r-bh" ,r-bh)
- ("r-ggplot2" ,r-ggplot2)
- ("r-lme4" ,r-lme4)
- ("r-loo" ,r-loo)
- ("r-matrix" ,r-matrix)
- ("r-nlme" ,r-nlme)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)
- ("r-rcppparallel" ,r-rcppparallel)
- ("r-rstan" ,r-rstan)
- ("r-rstantools" ,r-rstantools)
- ("r-shinystan" ,r-shinystan)
- ("r-stanheaders" ,r-stanheaders)
- ("r-survival" ,r-survival)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list pandoc))
+ (propagated-inputs
+ (list r-bayesplot
+ r-bh
+ r-ggplot2
+ r-lme4
+ r-loo
+ r-matrix
+ r-nlme
+ r-rcpp
+ r-rcppeigen
+ r-rcppparallel
+ r-rstan
+ r-rstantools
+ r-shinystan
+ r-stanheaders
+ r-survival))
+ (native-inputs
+ (list r-knitr))
(home-page "https://mc-stan.org/rstanarm/")
(synopsis "Bayesian applied regression modeling via Stan")
(description
@@ -25057,9 +24319,9 @@ a formula and @code{data.frame} plus some additional arguments for priors.")
(properties `((upstream-name . "Kendall")))
(build-system r-build-system)
(propagated-inputs
- `(("r-boot" ,r-boot)))
+ (list r-boot))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/Kendall/")
(synopsis "Kendall rank correlation and Mann-Kendall trend test")
(description
@@ -25081,15 +24343,15 @@ trend test.")
(properties `((upstream-name . "keyring")))
(build-system r-build-system)
(propagated-inputs
- `(("r-askpass" ,r-askpass)
- ("r-assertthat" ,r-assertthat)
- ("r-filelock" ,r-filelock)
- ("r-openssl" ,r-openssl)
- ("r-r6" ,r-r6)
- ("r-rappdirs" ,r-rappdirs)
- ("r-sodium" ,r-sodium)
- ("r-yaml" ,r-yaml)))
- (native-inputs `(("pkg-config" ,pkg-config)))
+ (list r-askpass
+ r-assertthat
+ r-filelock
+ r-openssl
+ r-r6
+ r-rappdirs
+ r-sodium
+ r-yaml))
+ (native-inputs (list pkg-config))
(home-page "https://github.com/r-lib/keyring")
(synopsis "Access the system credential store from R")
(description
@@ -25114,7 +24376,7 @@ Additional storage back-ends can be added easily.")
(properties `((upstream-name . "zyp")))
(build-system r-build-system)
(propagated-inputs
- `(("r-kendall" ,r-kendall)))
+ (list r-kendall))
(home-page "https://cran.r-project.org/web/packages/zyp/")
(synopsis "Zhang + Yue-Pilon Trends Package")
(description
@@ -25138,10 +24400,7 @@ climate data.")
(properties `((upstream-name . "Rlinsolve")))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-rdpack" ,r-rdpack)))
+ (list r-matrix r-rcpp r-rcpparmadillo r-rdpack))
(home-page "https://cran.r-project.org/web/packages/Rlinsolve/")
(synopsis "Iterative solvers for (sparse) linear system of equations")
(description
@@ -25170,15 +24429,15 @@ linear systems can be manageable using the @code{Matrix} package along with
(properties `((upstream-name . "ZVCV")))
(build-system r-build-system)
(propagated-inputs
- `(("r-abind" ,r-abind)
- ("r-bh" ,r-bh)
- ("r-dplyr" ,r-dplyr)
- ("r-glmnet" ,r-glmnet)
- ("r-magrittr" ,r-magrittr)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-rlinsolve" ,r-rlinsolve)))
+ (list r-abind
+ r-bh
+ r-dplyr
+ r-glmnet
+ r-magrittr
+ r-mvtnorm
+ r-rcpp
+ r-rcpparmadillo
+ r-rlinsolve))
(home-page "https://cran.r-project.org/web/packages/ZVCV/")
(synopsis "Zero-Variance Control Variates")
(description
@@ -25207,13 +24466,13 @@ the posterior distribution in Bayesian statistics are also supplied.")
(properties `((upstream-name . "ztype")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertthat" ,r-assertthat)
- ("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-lubridate" ,r-lubridate)
- ("r-magrittr" ,r-magrittr)
- ("r-rvest" ,r-rvest)
- ("r-stringr" ,r-stringr)))
+ (list r-assertthat
+ r-dplyr
+ r-ggplot2
+ r-lubridate
+ r-magrittr
+ r-rvest
+ r-stringr))
(home-page "https://cran.r-project.org/web/packages/ztype/")
(synopsis "Run a Ztype game loaded with R functions")
(description
@@ -25236,7 +24495,7 @@ opponents' vessels.")
(properties `((upstream-name . "Zseq")))
(build-system r-build-system)
(propagated-inputs
- `(("r-gmp" ,r-gmp)))
+ (list r-gmp))
(home-page "https://cran.r-project.org/web/packages/Zseq/")
(synopsis "Integer sequence generator")
(description
@@ -25260,7 +24519,7 @@ Encyclopedia of Integer Sequences} (OEIS) in the function help page.")
(properties `((upstream-name . "isoband")))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/wilkelab/isoband")
(synopsis "Generate isolines and isobands from regularly spaced elevation grids")
(description
@@ -25283,7 +24542,7 @@ containing elevation data.")
(properties `((upstream-name . "ppcor")))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)))
+ (list r-mass))
(home-page "https://cran.r-project.org/web/packages/ppcor/")
(synopsis "Partial and semi-partial correlation")
(description
@@ -25305,16 +24564,16 @@ statistics and p-values of the correlation coefficients.")
(properties `((upstream-name . "hrbrthemes")))
(build-system r-build-system)
(propagated-inputs
- `(("r-extrafont" ,r-extrafont)
- ("r-gdtools" ,r-gdtools)
- ("r-ggplot2" ,r-ggplot2)
- ("r-htmltools" ,r-htmltools)
- ("r-knitr" ,r-knitr)
- ("r-magrittr" ,r-magrittr)
- ("r-rmarkdown" ,r-rmarkdown)
- ("r-scales" ,r-scales)))
+ (list r-extrafont
+ r-gdtools
+ r-ggplot2
+ r-htmltools
+ r-knitr
+ r-magrittr
+ r-rmarkdown
+ r-scales))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/hrbrmstr/hrbrthemes/")
(synopsis "Additional themes, theme components and utilities for @code{ggplot2}")
(description
@@ -25336,7 +24595,7 @@ and an overall emphasis on typography.")
"0zvjaf6cv0nrjb4l4llkr0mmgha7ig31p4ri2rlnqyjlxi5l8hyq"))))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/agrueneberg/crochet")
(synopsis "Implementation Helper for Matrix-Like Types")
(description
@@ -25398,10 +24657,9 @@ appropriate dog and cat images for many status codes.")
"0qknpw7zwwbzsbry94j8fn48mq7kq5rc5448g9hybbisain3wfvg"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-stringr" ,r-stringr)
- ("r-magrittr" ,r-magrittr)))
+ (list r-stringr r-magrittr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/stefano-meschiari/latex2exp/")
(synopsis "Use LaTeX expressions in plots")
(description "@code{latex2exp} parses and converts LaTeX math formulas to
@@ -25421,13 +24679,9 @@ rendered as text, axis labels, etc. throughout R's plotting system.")
"1zcbcxhw692s0y6izvwazyzhgx0iwsxsbcan2nk0mb7n11p7bypb"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-xml2" ,r-xml2)
- ("r-httr" ,r-httr)
- ("r-plyr" ,r-plyr)
- ("r-stringr" ,r-stringr)
- ("r-tibble" ,r-tibble)))
+ (list r-xml2 r-httr r-plyr r-stringr r-tibble))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/ropensci/oai/")
(synopsis "General purpose OAI-PMH services client")
(description "@code{oai} provides a general purpose client to work with
@@ -25471,7 +24725,7 @@ argon2 algorithm.")
(properties `((upstream-name . "getPass")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rstudioapi" ,r-rstudioapi)))
+ (list r-rstudioapi))
(home-page "https://github.com/wrathematics/getPass")
(synopsis "Masked user input")
(description
@@ -25495,10 +24749,7 @@ where tcltk is present are supported.")
(properties `((upstream-name . "remoter")))
(build-system r-build-system)
(propagated-inputs
- `(("r-argon2" ,r-argon2)
- ("r-getpass" ,r-getpass)
- ("r-pbdzmq" ,r-pbdzmq)
- ("r-png" ,r-png)))
+ (list r-argon2 r-getpass r-pbdzmq r-png))
(home-page "https://github.com/RBigData/remoter")
(synopsis "Control a remote R session from a local one")
(description
@@ -25521,7 +24772,7 @@ client).")
(properties `((upstream-name . "asd")))
(build-system r-build-system)
(propagated-inputs
- `(("r-mvtnorm" ,r-mvtnorm)))
+ (list r-mvtnorm))
(home-page "https://cran.r-project.org/web/packages/asd")
(synopsis "Simulations for Adaptive Seamless Designs")
(description
@@ -25570,14 +24821,14 @@ evaluated interactively.")
`((upstream-name . "bridgesampling")))
(build-system r-build-system)
(propagated-inputs
- `(("r-brobdingnag" ,r-brobdingnag)
- ("r-coda" ,r-coda)
- ("r-matrix" ,r-matrix)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-scales" ,r-scales)
- ("r-stringr" ,r-stringr)))
+ (list r-brobdingnag
+ r-coda
+ r-matrix
+ r-mvtnorm
+ r-scales
+ r-stringr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/quentingronau/bridgesampling")
(synopsis "Bridge sampling for marginal likelihoods and Bayes factors")
(description
@@ -25601,7 +24852,7 @@ general, via different versions of bridge sampling.")
`((upstream-name . "tea")))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)))
+ (list r-matrix))
(home-page "https://cran.r-project.org/web/packages/tea/")
(synopsis "Threshold estimation approaches")
(description
@@ -25652,10 +24903,9 @@ is also implemented here.")
`((upstream-name . "aws")))
(build-system r-build-system)
(propagated-inputs
- `(("r-awsmethods" ,r-awsmethods)
- ("r-gsl" ,r-gsl)))
+ (list r-awsmethods r-gsl))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/aws/")
(synopsis "Adaptive weights smoothing")
(description
@@ -25681,15 +24931,15 @@ filter.")
`((upstream-name . "sglOptim")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bh" ,r-bh)
- ("r-doparallel" ,r-doparallel)
- ("r-foreach" ,r-foreach)
- ("r-matrix" ,r-matrix)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-rcppprogress" ,r-rcppprogress)))
+ (list r-bh
+ r-doparallel
+ r-foreach
+ r-matrix
+ r-rcpp
+ r-rcpparmadillo
+ r-rcppprogress))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/nielsrhansen/sglOptim")
(synopsis "Generic sparse group Lasso solver")
(description
@@ -25717,7 +24967,7 @@ computing for cross validation and subsampling is supported through the
`((upstream-name . "grouped")))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)))
+ (list r-mass))
(home-page "https://cran.r-project.org/web/packages/grouped/")
(synopsis "Regression analysis of grouped and coarse data")
(description
@@ -25740,8 +24990,7 @@ under the coarsened at random assumption.")
`((upstream-name . "stam")))
(build-system r-build-system)
(propagated-inputs
- `(("r-np" ,r-np)
- ("r-sp" ,r-sp)))
+ (list r-np r-sp))
(home-page "https://cran.r-project.org/web/packages/stam")
(synopsis "Spatio-temporal analysis and modelling")
(description
@@ -25765,7 +25014,7 @@ Inferred Spatio-Temporal Modelling.")
`((upstream-name . "dcv")))
(build-system r-build-system)
(propagated-inputs
- `(("r-lmtest" ,r-lmtest)))
+ (list r-lmtest))
(home-page "https://cran.r-project.org/web/packages/dcv/")
(synopsis "Conventional cross-validation statistics for climate-growth model")
(description
@@ -25790,7 +25039,7 @@ Mean Test, Durbin-Watson statistic etc.")
`((upstream-name . "rcdd")))
(build-system r-build-system)
(inputs
- `(("gmp" ,gmp)))
+ (list gmp))
(home-page "https://www.stat.umn.edu/geyer/rcdd/")
(synopsis "Computational geometry")
(description
@@ -25816,11 +25065,9 @@ infinite-precision rational arithmetic.")
`((upstream-name . "Rxnat")))
(build-system r-build-system)
(propagated-inputs
- `(("r-httr" ,r-httr)
- ("r-rcurl" ,r-rcurl)
- ("r-tibble" ,r-tibble)))
+ (list r-httr r-rcurl r-tibble))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/Rxnat/")
(synopsis "Queries and extracts images from neuroimaging datasets")
(description
@@ -25854,16 +25101,15 @@ download images.")
(("\\$\\(R_HOME\\)") out))
(mkdir-p bin)))))))
(propagated-inputs
- `(("r-checkmate" ,r-checkmate)
- ("r-mime" ,r-mime)
- ("r-jsonlite" ,r-jsonlite)
- ("r-knitr" ,r-knitr)
- ("r-r6" ,r-r6)
- ("r-rcpp" ,r-rcpp)
- ("r-uuid" ,r-uuid)))
+ (list r-checkmate
+ r-mime
+ r-jsonlite
+ r-knitr
+ r-r6
+ r-rcpp
+ r-uuid))
(inputs
- `(("openssl" ,openssl)
- ("zlib" ,zlib)))
+ (list openssl zlib))
(home-page "https://github.com/s-u/Rserve")
(synopsis
"Server providing access to R from many languages and systems")
@@ -25891,9 +25137,7 @@ included in this package as well.")
(properties `((upstream-name . "gamm4")))
(build-system r-build-system)
(propagated-inputs
- `(("r-lme4" ,r-lme4)
- ("r-matrix" ,r-matrix)
- ("r-mgcv" ,r-mgcv)))
+ (list r-lme4 r-matrix r-mgcv))
(home-page "https://cran.r-project.org/web/packages/gamm4/")
(synopsis "Generalized additive mixed models using mgcv and lme4")
(description
@@ -25915,8 +25159,8 @@ estimation.")
"0hvrpfya767vp3anmb8ih516v4zz1sv4h193rn93kyjydf2lqf1r"))))
(properties `((upstream-name . "optimx")))
(build-system r-build-system)
- (propagated-inputs `(("r-numderiv" ,r-numderiv)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (propagated-inputs (list r-numderiv))
+ (native-inputs (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/optimx/")
(synopsis "Expanded replacement and extension of the optim function")
(description
@@ -25944,21 +25188,21 @@ here.")
(properties `((upstream-name . "projpred")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-gamm4" ,r-gamm4)
- ("r-ggplot2" ,r-ggplot2)
- ("r-lme4" ,r-lme4)
- ("r-loo" ,r-loo)
- ("r-magrittr" ,r-magrittr)
- ("r-mass" ,r-mass)
- ("r-mgcv" ,r-mgcv)
- ("r-optimx" ,r-optimx)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-rngtools" ,r-rngtools)
- ("r-rstantools" ,r-rstantools)
- ("r-tidyverse" ,r-tidyverse)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-dplyr
+ r-gamm4
+ r-ggplot2
+ r-lme4
+ r-loo
+ r-magrittr
+ r-mass
+ r-mgcv
+ r-optimx
+ r-rcpp
+ r-rcpparmadillo
+ r-rngtools
+ r-rstantools
+ r-tidyverse))
+ (native-inputs (list r-knitr))
(home-page "https://mc-stan.org/projpred/")
(synopsis "Projection predictive feature selection")
(description
@@ -25984,16 +25228,16 @@ vignette for more information and examples.")
`((upstream-name . "distributional")))
(build-system r-build-system)
(propagated-inputs
- `(("r-digest" ,r-digest)
- ("r-ellipsis" ,r-ellipsis)
- ("r-farver" ,r-farver)
- ("r-generics" ,r-generics)
- ("r-ggplot2" ,r-ggplot2)
- ("r-lifecycle" ,r-lifecycle)
- ("r-numderiv" ,r-numderiv)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)
- ("r-vctrs" ,r-vctrs)))
+ (list r-digest
+ r-ellipsis
+ r-farver
+ r-generics
+ r-ggplot2
+ r-lifecycle
+ r-numderiv
+ r-rlang
+ r-scales
+ r-vctrs))
(home-page "https://pkg.mitchelloharawild.com/distributional/")
(synopsis "Vectorized probability distributions")
(description
@@ -26020,17 +25264,17 @@ including means, variances, intervals, and highest density regions.")
(properties `((upstream-name . "posterior")))
(build-system r-build-system)
(propagated-inputs
- `(("r-abind" ,r-abind)
- ("r-checkmate" ,r-checkmate)
- ("r-distributional" ,r-distributional)
- ("r-matrixstats" ,r-matrixstats)
- ("r-pillar" ,r-pillar)
- ("r-rlang" ,r-rlang)
- ("r-tensora" ,r-tensora)
- ("r-tibble" ,r-tibble)
- ("r-vctrs" ,r-vctrs)))
+ (list r-abind
+ r-checkmate
+ r-distributional
+ r-matrixstats
+ r-pillar
+ r-rlang
+ r-tensora
+ r-tibble
+ r-vctrs))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://mc-stan.org/posterior/")
(synopsis "Tools for working with posterior distributions")
(description
@@ -26067,27 +25311,27 @@ inference diagnostics.
(properties `((upstream-name . "brms")))
(build-system r-build-system)
(propagated-inputs
- `(("r-abind" ,r-abind)
- ("r-backports" ,r-backports)
- ("r-bayesplot" ,r-bayesplot)
- ("r-bridgesampling" ,r-bridgesampling)
- ("r-coda" ,r-coda)
- ("r-future" ,r-future)
- ("r-ggplot2" ,r-ggplot2)
- ("r-glue" ,r-glue)
- ("r-loo" ,r-loo)
- ("r-matrix" ,r-matrix)
- ("r-matrixstats" ,r-matrixstats)
- ("r-mgcv" ,r-mgcv)
- ("r-nleqslv" ,r-nleqslv)
- ("r-nlme" ,r-nlme)
- ("r-posterior" ,r-posterior)
- ("r-projpred" ,r-projpred)
- ("r-rcpp" ,r-rcpp)
- ("r-rstan" ,r-rstan)
- ("r-rstantools" ,r-rstantools)
- ("r-shinystan" ,r-shinystan)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-abind
+ r-backports
+ r-bayesplot
+ r-bridgesampling
+ r-coda
+ r-future
+ r-ggplot2
+ r-glue
+ r-loo
+ r-matrix
+ r-matrixstats
+ r-mgcv
+ r-nleqslv
+ r-nlme
+ r-posterior
+ r-projpred
+ r-rcpp
+ r-rstan
+ r-rstantools
+ r-shinystan))
+ (native-inputs (list r-knitr))
(home-page
"https://github.com/paul-buerkner/brms")
(synopsis
@@ -26121,14 +25365,14 @@ with posterior predictive checks and leave-one-out cross-validation.")
(properties `((upstream-name . "mstate")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-lattice" ,r-lattice)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-rlang" ,r-rlang)
- ("r-survival" ,r-survival)
- ("r-viridislite" ,r-viridislite)))
+ (list r-data-table
+ r-lattice
+ r-rcolorbrewer
+ r-rlang
+ r-survival
+ r-viridislite))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page
"https://www.lumc.nl/org/bds/research/medische-statistiek/survival-analysis/")
(synopsis
@@ -26153,13 +25397,9 @@ multi-state models.")
(properties `((upstream-name . "scatterpie")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggforce" ,r-ggforce)
- ("r-ggfun" ,r-ggfun)
- ("r-ggplot2" ,r-ggplot2)
- ("r-rlang" ,r-rlang)
- ("r-tidyr" ,r-tidyr)))
+ (list r-ggforce r-ggfun r-ggplot2 r-rlang r-tidyr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/scatterpie/")
(synopsis "Scatter pie plot")
(description
@@ -26181,7 +25421,7 @@ pies on a map.")
(properties `((upstream-name . "scrypt")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)))
+ (list r-rcpp))
(home-page "https://github.com/rstudio/rscrypt")
(synopsis "Key derivation functions for R based on Scrypt")
(description
@@ -26205,7 +25445,7 @@ amounts of memory.")
"0y2w4wb45kfnzrxcrdsiwgal9fsnlr3wad1sqdc70qv8gp921xbg"))))
(properties `((upstream-name . "Boruta")))
(build-system r-build-system)
- (propagated-inputs `(("r-ranger" ,r-ranger)))
+ (propagated-inputs (list r-ranger))
(home-page "https://gitlab.com/mbq/Boruta/")
(synopsis "Wrapper algorithm for all relevant feature selection")
(description
@@ -26228,9 +25468,9 @@ permuted copies (shadows).")
"0415kh9k2qzdwi8zb32fh2icl5wf5335kyj11cyfdmfxji39zv2w"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-quadprog" ,r-quadprog)))
+ (list r-quadprog))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "http://directlabels.r-forge.r-project.org/")
(synopsis "Direct labels for multicolor plots")
(description
@@ -26273,7 +25513,7 @@ Try a demo of the LSD by running @code{demotour()}.")
(base32 "1p4h5pirc0m5pzc18q0jk3mcmb5n48gdf9abz03vml3a209xxl2v"))))
(properties `((upstream-name . "phylogram")))
(build-system r-build-system)
- (propagated-inputs `(("r-ape" ,r-ape)))
+ (propagated-inputs (list r-ape))
(home-page "https://github.com/ropensci/phylogram/")
(synopsis "Dendrograms for evolutionary analysis")
(description
@@ -26299,9 +25539,7 @@ across a wide array of bioinformatic R packages.")
(properties `((upstream-name . "kmer")))
(build-system r-build-system)
(propagated-inputs
- `(("r-openssl" ,r-openssl)
- ("r-phylogram" ,r-phylogram)
- ("r-rcpp" ,r-rcpp)))
+ (list r-openssl r-phylogram r-rcpp))
(home-page "https://github.com/shaunpwilkinson/kmer/")
(synopsis "Fast K-Mer counting and clustering for biological sequence analysis")
(description
@@ -26324,12 +25562,9 @@ counting and recursive k-means partitioning.")
(properties `((upstream-name . "hardhat")))
(build-system r-build-system)
(propagated-inputs
- `(("r-glue" ,r-glue)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-vctrs" ,r-vctrs)))
+ (list r-glue r-rlang r-tibble r-vctrs))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/tidymodels/hardhat")
(synopsis "Construct modeling packages")
(description
@@ -26357,10 +25592,7 @@ input.")
(properties `((upstream-name . "lightgbm")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-jsonlite" ,r-jsonlite)
- ("r-matrix" ,r-matrix)
- ("r-r6" ,r-r6)))
+ (list r-data-table r-jsonlite r-matrix r-r6))
(home-page "https://github.com/Microsoft/LightGBM")
(synopsis "Light gradient boosting machine")
(description
@@ -26394,16 +25626,16 @@ designed to be distributed and efficient with the following goals:
`((upstream-name . "SHAPforxgboost")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bbmisc" ,r-bbmisc)
- ("r-data-table" ,r-data-table)
- ("r-ggextra" ,r-ggextra)
- ("r-ggforce" ,r-ggforce)
- ("r-ggplot2" ,r-ggplot2)
- ("r-ggpubr" ,r-ggpubr)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-xgboost" ,r-xgboost)))
+ (list r-bbmisc
+ r-data-table
+ r-ggextra
+ r-ggforce
+ r-ggplot2
+ r-ggpubr
+ r-rcolorbrewer
+ r-xgboost))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/liuyanguu/SHAPforxgboost")
(synopsis "SHAP Plots for XGBoost")
(description
@@ -26428,8 +25660,7 @@ values.")
(properties `((upstream-name . "RISmed")))
(build-system r-build-system)
(propagated-inputs
- `(("r-httr" ,r-httr)
- ("r-xml2" ,r-xml2)))
+ (list r-httr r-xml2))
(home-page "https://cran.r-project.org/web/packages/RISmed")
(synopsis "Download content from NCBI databases")
(description
@@ -26454,9 +25685,8 @@ bibliographic data) and PubMed.")
(properties `((upstream-name . "semver")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertthat" ,r-assertthat)
- ("r-rcpp" ,r-rcpp)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-assertthat r-rcpp))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/johndharrison/semver")
(synopsis "Parser for Semantic Versioning 2.0.0")
(description
@@ -26480,14 +25710,14 @@ incremented as outlined at @url{http://semver.org}.")
(properties `((upstream-name . "binman")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertthat" ,r-assertthat)
- ("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-rappdirs" ,r-rappdirs)
- ("r-semver" ,r-semver)
- ("r-xml2" ,r-xml2)
- ("r-yaml" ,r-yaml)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-assertthat
+ r-httr
+ r-jsonlite
+ r-rappdirs
+ r-semver
+ r-xml2
+ r-yaml))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/ropensci/binman")
(synopsis "Binary download manager")
(description
@@ -26511,12 +25741,8 @@ repositories to be added.")
(properties `((upstream-name . "wdman")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertthat" ,r-assertthat)
- ("r-binman" ,r-binman)
- ("r-processx" ,r-processx)
- ("r-semver" ,r-semver)
- ("r-yaml" ,r-yaml)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-assertthat r-binman r-processx r-semver r-yaml))
+ (native-inputs (list r-knitr))
(home-page "https://docs.ropensci.org/wdman/")
(synopsis "Webdriver/Selenium binary manager")
(description
@@ -26544,13 +25770,13 @@ and to manage processes involving them.")
(properties `((upstream-name . "RSelenium")))
(build-system r-build-system)
(propagated-inputs
- `(("r-binman" ,r-binman)
- ("r-catools" ,r-catools)
- ("r-httr" ,r-httr)
- ("r-openssl" ,r-openssl)
- ("r-wdman" ,r-wdman)
- ("r-xml" ,r-xml)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-binman
+ r-catools
+ r-httr
+ r-openssl
+ r-wdman
+ r-xml))
+ (native-inputs (list r-knitr))
(home-page "https://docs.ropensci.org/RSelenium/")
(synopsis "R bindings for Selenium WebDriver")
(description
@@ -26579,11 +25805,7 @@ you can automate browsers locally or remotely.")
(properties `((upstream-name . "conquer")))
(build-system r-build-system)
(propagated-inputs
- `(("r-caret" ,r-caret)
- ("r-matrix" ,r-matrix)
- ("r-matrixstats" ,r-matrixstats)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)))
+ (list r-caret r-matrix r-matrixstats r-rcpp r-rcpparmadillo))
(home-page "https://github.com/XiaoouPan/conquer")
(synopsis "Convolution-type smoothed quantile regression")
(description
@@ -26607,14 +25829,14 @@ coefficients are constructed using multiplier bootstrap.")
(properties `((upstream-name . "fastshap")))
(build-system r-build-system)
(propagated-inputs
- `(("r-abind" ,r-abind)
- ("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-matrixstats" ,r-matrixstats)
- ("r-plyr" ,r-plyr)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-tibble" ,r-tibble)))
+ (list r-abind
+ r-ggplot2
+ r-gridextra
+ r-matrixstats
+ r-plyr
+ r-rcpp
+ r-rcpparmadillo
+ r-tibble))
(home-page "https://github.com/bgreenwell/fastshap")
(synopsis "Fast approximate Shapley values")
(description
@@ -26682,17 +25904,17 @@ simple interface for all functions.")
(properties `((upstream-name . "iml")))
(build-system r-build-system)
(propagated-inputs
- `(("r-checkmate" ,r-checkmate)
- ("r-data-table" ,r-data-table)
- ("r-formula" ,r-formula)
- ("r-future" ,r-future)
- ("r-future-apply" ,r-future-apply)
- ("r-ggplot2" ,r-ggplot2)
- ("r-keras" ,r-keras)
- ("r-metrics" ,r-metrics)
- ("r-prediction" ,r-prediction)
- ("r-r6" ,r-r6)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-checkmate
+ r-data-table
+ r-formula
+ r-future
+ r-future-apply
+ r-ggplot2
+ r-keras
+ r-metrics
+ r-prediction
+ r-r6))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/christophM/iml")
(synopsis "Interpretable machine learning")
(description
@@ -26792,10 +26014,7 @@ which may also be useful for other purposes.")
`((upstream-name . "spatstat.sparse")))
(build-system r-build-system)
(propagated-inputs
- `(("r-abind" ,r-abind)
- ("r-matrix" ,r-matrix)
- ("r-spatstat-utils" ,r-spatstat-utils)
- ("r-tensor" ,r-tensor)))
+ (list r-abind r-matrix r-spatstat-utils r-tensor))
(home-page "http://spatstat.org/")
(synopsis "Sparse three-dimensional arrays and linear algebra utilities")
(description
@@ -26818,8 +26037,7 @@ matrix calculations that are common in statistics, such as quadratic forms.")
(properties `((upstream-name . "spatstat.data")))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)
- ("r-spatstat-utils" ,r-spatstat-utils)))
+ (list r-matrix r-spatstat-utils))
(home-page "http://www.spatstat.org")
(synopsis "Datasets for spatstat")
(description
@@ -26841,10 +26059,7 @@ package.")
(properties `((upstream-name . "spatstat.geom")))
(build-system r-build-system)
(propagated-inputs
- `(("r-deldir" ,r-deldir)
- ("r-polyclip" ,r-polyclip)
- ("r-spatstat-data" ,r-spatstat-data)
- ("r-spatstat-utils" ,r-spatstat-utils)))
+ (list r-deldir r-polyclip r-spatstat-data r-spatstat-utils))
(home-page "http://spatstat.org/")
(synopsis "Geometrical functionality of the spatstat package")
(description
@@ -26867,17 +26082,17 @@ for the geometry of linear networks.")
(properties `((upstream-name . "spatstat.core")))
(build-system r-build-system)
(propagated-inputs
- `(("r-abind" ,r-abind)
- ("r-goftest" ,r-goftest)
- ("r-matrix" ,r-matrix)
- ("r-mgcv" ,r-mgcv)
- ("r-nlme" ,r-nlme)
- ("r-rpart" ,r-rpart)
- ("r-spatstat-data" ,r-spatstat-data)
- ("r-spatstat-geom" ,r-spatstat-geom)
- ("r-spatstat-sparse" ,r-spatstat-sparse)
- ("r-spatstat-utils" ,r-spatstat-utils)
- ("r-tensor" ,r-tensor)))
+ (list r-abind
+ r-goftest
+ r-matrix
+ r-mgcv
+ r-nlme
+ r-rpart
+ r-spatstat-data
+ r-spatstat-geom
+ r-spatstat-sparse
+ r-spatstat-utils
+ r-tensor))
(home-page "http://spatstat.org/")
(synopsis "Core functionality of the spatstat package")
(description
@@ -26900,12 +26115,12 @@ user-level code from spatstat, except for the code for linear networks.")
`((upstream-name . "spatstat.linnet")))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)
- ("r-spatstat-core" ,r-spatstat-core)
- ("r-spatstat-data" ,r-spatstat-data)
- ("r-spatstat-geom" ,r-spatstat-geom)
- ("r-spatstat-sparse" ,r-spatstat-sparse)
- ("r-spatstat-utils" ,r-spatstat-utils)))
+ (list r-matrix
+ r-spatstat-core
+ r-spatstat-data
+ r-spatstat-geom
+ r-spatstat-sparse
+ r-spatstat-utils))
(home-page "http://spatstat.org/")
(synopsis "Linear networks functionality of the spatstat package")
(description
@@ -26927,11 +26142,8 @@ for spatial data on a linear network.")
(properties `((upstream-name . "spatstat")))
(build-system r-build-system)
(propagated-inputs
- `(("r-spatstat-core" ,r-spatstat-core)
- ("r-spatstat-data" ,r-spatstat-data)
- ("r-spatstat-geom" ,r-spatstat-geom)
- ("r-spatstat-linnet" ,r-spatstat-linnet)
- ("r-spatstat-utils" ,r-spatstat-utils)))
+ (list r-spatstat-core r-spatstat-data r-spatstat-geom
+ r-spatstat-linnet r-spatstat-utils))
(home-page "http://www.spatstat.org")
(synopsis "Spatial Point Pattern analysis, model-fitting, simulation, tests")
(description
@@ -26959,12 +26171,10 @@ formal inference.")
"14z94dpln4dvgrv2w7w9ik7h6rpvbf02qhq1hqzx8c2cndzxr21i"))))
(properties `((upstream-name . "gaston")))
(build-system r-build-system)
- (inputs `(("zlib" ,zlib)))
+ (inputs (list zlib))
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)
- ("r-rcppparallel" ,r-rcppparallel)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-rcpp r-rcppeigen r-rcppparallel))
+ (native-inputs (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/gaston/")
(synopsis "Genetic data handling (QC, GRM, LD, PCA) and linear mixed models")
(description
@@ -26987,7 +26197,7 @@ for linear mixed models (AIREML).")
"1nk47xkab7i17h7917l4cfyfvnxf782dfq67wwxa6n0r4jqqxzz9"))))
(properties `((upstream-name . "cpp11")))
(build-system r-build-system)
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/r-lib/cpp11")
(synopsis "C++11 Interface for R's C Interface")
(description
@@ -27011,9 +26221,8 @@ semantics and supports interaction with @code{ALTREP} vectors.")
(properties `((upstream-name . "RcppZiggurat")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-rcppgsl" ,r-rcppgsl)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-rcpp r-rcppgsl))
+ (native-inputs (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/RcppZiggurat/")
(synopsis "Rcpp integration of different \"Ziggurat\" normal RNG implementations")
(description
@@ -27040,9 +26249,7 @@ aggregation for comparing different implementations in order to provide a
(properties `((upstream-name . "Rfast")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-rcppziggurat" ,r-rcppziggurat)))
+ (list r-rcpp r-rcpparmadillo r-rcppziggurat))
(home-page "https://github.com/RfastOfficial/Rfast")
(synopsis "Collection of efficient and fast R functions")
(description
@@ -27066,7 +26273,7 @@ Poisson), are some of the many fast functions.")
"05x9wgzsmx4vb12lmcspymgmpb2xw8bwryb8ysg7vzg2nkh0ma3g"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-randomforest",r-randomforest)))
+ (list r-randomforest))
(home-page "https://r-forge.r-project.org/projects/rffc/")
(synopsis "Random Forest Feature Contributions")
(description "This package provides functions for extracting feature
@@ -27090,12 +26297,8 @@ model.")
(properties `((upstream-name . "ClusterR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-gmp" ,r-gmp)
- ("r-gtools" ,r-gtools)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-ggplot2 r-gmp r-gtools r-rcpp r-rcpparmadillo))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/mlampros/ClusterR")
(synopsis "Clustering")
(description
@@ -27136,11 +26339,8 @@ see
(properties `((upstream-name . "Spectrum")))
(build-system r-build-system)
(propagated-inputs
- `(("r-clusterr" ,r-clusterr)
- ("r-diptest" ,r-diptest)
- ("r-ggplot2" ,r-ggplot2)
- ("r-rfast" ,r-rfast)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-clusterr r-diptest r-ggplot2 r-rfast))
+ (native-inputs (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/Spectrum/")
(synopsis "Fast adaptive spectral clustering for single and multi-view data")
(description
@@ -27169,9 +26369,7 @@ of K.")
(properties `((upstream-name . "nabor")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bh" ,r-bh)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)))
+ (list r-bh r-rcpp r-rcppeigen))
(home-page "https://cran.r-project.org/web/packages/nabor/")
(synopsis "Wrapper for K nearest neighbour library for low dimensions")
(description
@@ -27214,16 +26412,16 @@ not digit characters.")
"1ikqp29nncbw1xlwyb9dqqgcdk9q0bs3wxhnhnjpb11vcjv7cz2j"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-glue" ,r-glue)
- ("r-magrittr" ,r-magrittr)
- ("r-purrr" ,r-purrr)
- ("r-readr" ,r-readr)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)))
+ (list r-dplyr
+ r-ggplot2
+ r-glue
+ r-magrittr
+ r-purrr
+ r-readr
+ r-tibble
+ r-tidyr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://visdat.njtierney.com/")
(synopsis "Preliminary Visualisation of Data")
(description "This package provides procedures to create preliminary exploratory
@@ -27245,9 +26443,9 @@ using @code{ggplot2}.")
(properties `((upstream-name . "muhaz")))
(build-system r-build-system)
(propagated-inputs
- `(("r-survival" ,r-survival)))
+ (list r-survival))
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/web/packages/muhaz/")
(synopsis "Hazard function estimation in survival analysis")
(description
@@ -27270,27 +26468,27 @@ censored data.")
(properties `((upstream-name . "flexsurv")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertthat" ,r-assertthat)
- ("r-desolve" ,r-desolve)
- ("r-dplyr" ,r-dplyr)
- ("r-generics" ,r-generics)
- ("r-magrittr" ,r-magrittr)
- ("r-matrix" ,r-matrix)
- ("r-mstate" ,r-mstate)
- ("r-muhaz" ,r-muhaz)
- ("r-mvtnorm" ,r-mvtnorm)
- ("r-numderiv" ,r-numderiv)
- ("r-purrr" ,r-purrr)
- ("r-quadprog" ,r-quadprog)
- ("r-rcpp" ,r-rcpp)
- ("r-rlang" ,r-rlang)
- ("r-rstpm2" ,r-rstpm2)
- ("r-survival" ,r-survival)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)
- ("r-tidyselect" ,r-tidyselect)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-assertthat
+ r-desolve
+ r-dplyr
+ r-generics
+ r-magrittr
+ r-matrix
+ r-mstate
+ r-muhaz
+ r-mvtnorm
+ r-numderiv
+ r-purrr
+ r-quadprog
+ r-rcpp
+ r-rlang
+ r-rstpm2
+ r-survival
+ r-tibble
+ r-tidyr
+ r-tidyselect))
+ (native-inputs
+ (list r-knitr))
(home-page "https://github.com/chjackson/flexsurv-dev")
(synopsis "Flexible parametric survival and multi-state models")
(description
@@ -27316,10 +26514,9 @@ models.")
(properties `((upstream-name . "TransPhylo")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ape" ,r-ape)
- ("r-rcpp" ,r-rcpp)))
+ (list r-ape r-rcpp))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/TransPhylo/")
(synopsis "Inference of transmission tree from a dated phylogeny")
(description
@@ -27343,7 +26540,7 @@ and @url{https://doi.org/10.1093/molbev/msw275,Didelot et al. (2017)}.")
(properties `((upstream-name . "km.ci")))
(build-system r-build-system)
(propagated-inputs
- `(("r-survival" ,r-survival)))
+ (list r-survival))
(home-page "https://cran.r-project.org/web/packages/km.ci/")
(synopsis "Confidence intervals for the Kaplan-Meier estimator")
(description
@@ -27388,17 +26585,17 @@ Springer.")
(properties `((upstream-name . "survMisc")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)
- ("r-km-ci" ,r-km-ci)
- ("r-kmsurv" ,r-kmsurv)
- ("r-knitr" ,r-knitr)
- ("r-survival" ,r-survival)
- ("r-xtable" ,r-xtable)
- ("r-zoo" ,r-zoo)))
+ (list r-data-table
+ r-ggplot2
+ r-gridextra
+ r-km-ci
+ r-kmsurv
+ r-knitr
+ r-survival
+ r-xtable
+ r-zoo))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/survMisc/")
(synopsis "Miscellaneous functions for survival data")
(description
@@ -27442,8 +26639,7 @@ implementation of the Shift-Algorithm by Streitberg & Roehmel.")
(properties `((upstream-name . "maxstat")))
(build-system r-build-system)
(propagated-inputs
- `(("r-exactranktests" ,r-exactranktests)
- ("r-mvtnorm" ,r-mvtnorm)))
+ (list r-exactranktests r-mvtnorm))
(home-page "https://cran.r-project.org/web/packages/maxstat/")
(synopsis "Maximally selected rank statistics")
(description
@@ -27465,23 +26661,23 @@ p-value approximations.")
(properties `((upstream-name . "survminer")))
(build-system r-build-system)
(propagated-inputs
- `(("r-broom" ,r-broom)
- ("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-ggpubr" ,r-ggpubr)
- ("r-ggtext" ,r-ggtext)
- ("r-gridextra" ,r-gridextra)
- ("r-magrittr" ,r-magrittr)
- ("r-maxstat" ,r-maxstat)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)
- ("r-survival" ,r-survival)
- ("r-survmisc" ,r-survmisc)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-broom
+ r-dplyr
+ r-ggplot2
+ r-ggpubr
+ r-ggtext
+ r-gridextra
+ r-magrittr
+ r-maxstat
+ r-purrr
+ r-rlang
+ r-scales
+ r-survival
+ r-survmisc
+ r-tibble
+ r-tidyr))
+ (native-inputs
+ (list r-knitr))
(home-page "https://rpkgs.datanovia.com/survminer/index.html")
(synopsis "Drawing survival curves using ggplot2")
(description
@@ -27506,8 +26702,7 @@ assumptions.")
(properties `((upstream-name . "forge")))
(build-system r-build-system)
(propagated-inputs
- `(("r-magrittr" ,r-magrittr)
- ("r-rlang" ,r-rlang)))
+ (list r-magrittr r-rlang))
(home-page "https://cran.r-project.org/web/packages/forge/")
(synopsis "Cast values into shape")
(description
@@ -27529,9 +26724,9 @@ coerce and verify the types and shapes of values for input checking.")
(properties `((upstream-name . "config")))
(build-system r-build-system)
(propagated-inputs
- `(("r-yaml" ,r-yaml)))
+ (list r-yaml))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/rstudio/config")
(synopsis "Manage environment specific configuration values")
(description
@@ -27564,12 +26759,9 @@ value.")
(string-append prefix "-larmadillo")))
#t)))))
(propagated-inputs
- `(("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)))
+ (list r-mass r-matrix r-rcpp r-rcpparmadillo))
(inputs
- `(("armadillo" ,armadillo)))
+ (list armadillo))
(home-page "https://cran.r-project.org/web/packages/AdaptiveSparsity")
(synopsis "Adaptive sparsity models")
(description
@@ -27592,9 +26784,7 @@ geometric models.")
(properties `((upstream-name . "diffusionMap")))
(build-system r-build-system)
(propagated-inputs
- `(("r-igraph" ,r-igraph)
- ("r-matrix" ,r-matrix)
- ("r-scatterplot3d" ,r-scatterplot3d)))
+ (list r-igraph r-matrix r-scatterplot3d))
(home-page "https://www.r-project.org")
(synopsis "Diffusion map")
(description "This package implements the diffusion map method of data
@@ -27616,16 +26806,11 @@ model.")
"01hvphaf5mx9xvwiazcw39kp6gc1lafqrbjwczy6f7hr145dn1pl"))))
(build-system r-build-system)
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(inputs
- `(("gmp" ,gmp)
- ("glpk" ,glpk)
- ("libxml2" ,libxml2)
- ("zlib" ,zlib)))
+ (list gmp glpk libxml2 zlib))
(propagated-inputs
- `(("r-magrittr" ,r-magrittr)
- ("r-matrix" ,r-matrix)
- ("r-pkgconfig" ,r-pkgconfig)))
+ (list r-magrittr r-matrix r-pkgconfig))
(home-page "https://igraph.org")
(synopsis "Network analysis and visualization")
(description
@@ -27649,18 +26834,18 @@ more.")
(properties `((upstream-name . "workflows")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cli" ,r-cli)
- ("r-ellipsis" ,r-ellipsis)
- ("r-generics" ,r-generics)
- ("r-glue" ,r-glue)
- ("r-hardhat" ,r-hardhat)
- ("r-lifecycle" ,r-lifecycle)
- ("r-parsnip" ,r-parsnip)
- ("r-rlang" ,r-rlang)
- ("r-tidyselect" ,r-tidyselect)
- ("r-vctrs" ,r-vctrs)))
+ (list r-cli
+ r-ellipsis
+ r-generics
+ r-glue
+ r-hardhat
+ r-lifecycle
+ r-parsnip
+ r-rlang
+ r-tidyselect
+ r-vctrs))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/tidymodels/workflows")
(synopsis "Modeling workflows")
(description
@@ -27695,9 +26880,7 @@ workflow. The advantages are:
(properties `((upstream-name . "lobstr")))
(build-system r-build-system)
(propagated-inputs
- `(("r-crayon" ,r-crayon)
- ("r-rcpp" ,r-rcpp)
- ("r-rlang" ,r-rlang)))
+ (list r-crayon r-rcpp r-rlang))
(home-page "https://github.com/r-lib/lobstr")
(synopsis "Visualize R data structures with trees")
(description
@@ -27722,8 +26905,7 @@ object sizes.")
(properties `((upstream-name . "GPfit")))
(build-system r-build-system)
(propagated-inputs
- `(("r-lattice" ,r-lattice)
- ("r-lhs" ,r-lhs)))
+ (list r-lattice r-lhs))
(home-page "https://cran.r-project.org/web/packages/GPfit/")
(synopsis "Gaussian Processes modeling")
(description
@@ -27745,14 +26927,14 @@ object sizes.")
(properties `((upstream-name . "yardstick")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-generics" ,r-generics)
- ("r-proc" ,r-proc)
- ("r-rlang" ,r-rlang)
- ("r-tidyselect" ,r-tidyselect)
- ("r-vctrs" ,r-vctrs)))
+ (list r-dplyr
+ r-generics
+ r-proc
+ r-rlang
+ r-tidyselect
+ r-vctrs))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/tidymodels/yardstick")
(synopsis "Tidy characterizations of model performance")
(description
@@ -27774,7 +26956,7 @@ and regression metrics (e.g., RMSE).")
"0s0acddc5h14245hi1faycxp0fyvw6nlgaz2df7da4fpyd2f638f"))))
(properties `((upstream-name . "warp")))
(build-system r-build-system)
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/DavisVaughan/warp")
(synopsis "Group dates")
(description
@@ -27800,12 +26982,8 @@ observations.")
(properties `((upstream-name . "slider")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ellipsis" ,r-ellipsis)
- ("r-glue" ,r-glue)
- ("r-rlang" ,r-rlang)
- ("r-vctrs" ,r-vctrs)
- ("r-warp" ,r-warp)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-ellipsis r-glue r-rlang r-vctrs r-warp))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/DavisVaughan/slider")
(synopsis "Sliding window functions")
(description
@@ -27829,20 +27007,20 @@ sliding windows are to be created.")
(properties `((upstream-name . "rsample")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-ellipsis" ,r-ellipsis)
- ("r-furrr" ,r-furrr)
- ("r-generics" ,r-generics)
- ("r-lifecycle" ,r-lifecycle)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-slider" ,r-slider)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)
- ("r-tidyselect" ,r-tidyselect)
- ("r-vctrs" ,r-vctrs)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-dplyr
+ r-ellipsis
+ r-furrr
+ r-generics
+ r-lifecycle
+ r-purrr
+ r-rlang
+ r-slider
+ r-tibble
+ r-tidyr
+ r-tidyselect
+ r-vctrs))
+ (native-inputs
+ (list r-knitr))
(home-page "https://rsample.tidymodels.org")
(synopsis "General resampling infrastructure")
(description
@@ -27884,16 +27062,16 @@ Design} (SFD) and to test their quality.")
(properties `((upstream-name . "dials")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dicedesign" ,r-dicedesign)
- ("r-dplyr" ,r-dplyr)
- ("r-glue" ,r-glue)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)
- ("r-tibble" ,r-tibble)
- ("r-vctrs" ,r-vctrs)
- ("r-withr" ,r-withr)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-dicedesign
+ r-dplyr
+ r-glue
+ r-purrr
+ r-rlang
+ r-scales
+ r-tibble
+ r-vctrs
+ r-withr))
+ (native-inputs (list r-knitr))
(home-page "https://dials.tidymodels.org/")
(synopsis "Tools for creating tuning parameter values")
(description
@@ -27916,27 +27094,27 @@ for creating, simulating, or validating values for such parameters.")
(properties `((upstream-name . "tune")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cli" ,r-cli)
- ("r-dials" ,r-dials)
- ("r-dplyr" ,r-dplyr)
- ("r-foreach" ,r-foreach)
- ("r-generics" ,r-generics)
- ("r-ggplot2" ,r-ggplot2)
- ("r-glue" ,r-glue)
- ("r-gpfit" ,r-gpfit)
- ("r-hardhat" ,r-hardhat)
- ("r-lifecycle" ,r-lifecycle)
- ("r-parsnip" ,r-parsnip)
- ("r-purrr" ,r-purrr)
- ("r-recipes" ,r-recipes)
- ("r-rlang" ,r-rlang)
- ("r-rsample" ,r-rsample)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)
- ("r-vctrs" ,r-vctrs)
- ("r-withr" ,r-withr)
- ("r-workflows" ,r-workflows)
- ("r-yardstick" ,r-yardstick)))
+ (list r-cli
+ r-dials
+ r-dplyr
+ r-foreach
+ r-generics
+ r-ggplot2
+ r-glue
+ r-gpfit
+ r-hardhat
+ r-lifecycle
+ r-parsnip
+ r-purrr
+ r-recipes
+ r-rlang
+ r-rsample
+ r-tibble
+ r-tidyr
+ r-vctrs
+ r-withr
+ r-workflows
+ r-yardstick))
(home-page "https://github.com/tidymodels/tune")
(synopsis "Tidy tuning tools")
(description
@@ -27960,24 +27138,24 @@ methods, and post-processing steps.")
(properties `((upstream-name . "workflowsets")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cli" ,r-cli)
- ("r-dplyr" ,r-dplyr)
- ("r-hardhat" ,r-hardhat)
- ("r-generics" ,r-generics)
- ("r-ggplot2" ,r-ggplot2)
- ("r-lifecycle" ,r-lifecycle)
- ("r-prettyunits" ,r-prettyunits)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-rsample" ,r-rsample)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)
- ("r-tune" ,r-tune)
- ("r-vctrs" ,r-vctrs)
- ("r-withr" ,r-withr)
- ("r-workflows" ,r-workflows)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-cli
+ r-dplyr
+ r-hardhat
+ r-generics
+ r-ggplot2
+ r-lifecycle
+ r-prettyunits
+ r-purrr
+ r-rlang
+ r-rsample
+ r-tibble
+ r-tidyr
+ r-tune
+ r-vctrs
+ r-withr
+ r-workflows))
+ (native-inputs
+ (list r-knitr))
(home-page "https://github.com/tidymodels/workflowsets")
(synopsis "Create a collection of tidymodels workflows")
(description
@@ -28002,20 +27180,20 @@ results.")
(properties `((upstream-name . "tidyposterior")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-generics" ,r-generics)
- ("r-ggplot2" ,r-ggplot2)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-rsample" ,r-rsample)
- ("r-rstanarm" ,r-rstanarm)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)
- ("r-tune" ,r-tune)
- ("r-vctrs" ,r-vctrs)
- ("r-workflowsets" ,r-workflowsets)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-dplyr
+ r-generics
+ r-ggplot2
+ r-purrr
+ r-rlang
+ r-rsample
+ r-rstanarm
+ r-tibble
+ r-tidyr
+ r-tune
+ r-vctrs
+ r-workflowsets))
+ (native-inputs
+ (list r-knitr))
(home-page "https://tidyposterior.tidymodels.org")
(synopsis "Bayesian analysis to compare models using resampling statistics")
(description
@@ -28040,16 +27218,16 @@ models without involving a test set.")
(properties `((upstream-name . "tidypredict")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-generics" ,r-generics)
- ("r-knitr" ,r-knitr)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-stringr" ,r-stringr)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)))
+ (list r-dplyr
+ r-generics
+ r-knitr
+ r-purrr
+ r-rlang
+ r-stringr
+ r-tibble
+ r-tidyr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://tidypredict.tidymodels.org")
(synopsis "Run predictions inside the database")
(description
@@ -28097,11 +27275,9 @@ and \"Persuasion\".")
(properties `((upstream-name . "tokenizers")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-snowballc" ,r-snowballc)
- ("r-stringi" ,r-stringi)))
+ (list r-rcpp r-snowballc r-stringi))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://lincolnmullen.com/software/tokenizers/")
(synopsis "Fast, consistent tokenization of natural language text")
(description
@@ -28129,10 +27305,9 @@ consistent interface, and the package is built on the @code{stringi} and
(properties `((upstream-name . "hunspell")))
(build-system r-build-system)
(propagated-inputs
- `(("r-digest" ,r-digest)
- ("r-rcpp" ,r-rcpp)))
+ (list r-digest r-rcpp))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/ropensci/hunspell#readme")
(synopsis "High-performance stemmer, tokenizer, and spell checker")
(description
@@ -28164,20 +27339,20 @@ vignettes in all common formats.")
(properties `((upstream-name . "tidytext")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-generics" ,r-generics)
- ("r-hunspell" ,r-hunspell)
- ("r-janeaustenr" ,r-janeaustenr)
- ("r-lifecycle" ,r-lifecycle)
- ("r-matrix" ,r-matrix)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-stringr" ,r-stringr)
- ("r-tibble" ,r-tibble)
- ("r-tokenizers" ,r-tokenizers)
- ("r-vctrs" ,r-vctrs)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-dplyr
+ r-generics
+ r-hunspell
+ r-janeaustenr
+ r-lifecycle
+ r-matrix
+ r-purrr
+ r-rlang
+ r-stringr
+ r-tibble
+ r-tokenizers
+ r-vctrs))
+ (native-inputs
+ (list r-knitr))
(home-page "https://github.com/juliasilge/tidytext")
(synopsis "Text mining using dplyr, ggplot2, and other Tidy tools")
(description
@@ -28199,21 +27374,21 @@ analysis using @code{dplyr}, @code{ggplot2}, and other Tidy tools.")
(properties `((upstream-name . "parsnip")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-generics" ,r-generics)
- ("r-globals" ,r-globals)
- ("r-glue" ,r-glue)
- ("r-hardhat" ,r-hardhat)
- ("r-lifecycle" ,r-lifecycle)
- ("r-magrittr" ,r-magrittr)
- ("r-prettyunits" ,r-prettyunits)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)
- ("r-vctrs" ,r-vctrs)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-dplyr
+ r-generics
+ r-globals
+ r-glue
+ r-hardhat
+ r-lifecycle
+ r-magrittr
+ r-prettyunits
+ r-purrr
+ r-rlang
+ r-tibble
+ r-tidyr
+ r-vctrs))
+ (native-inputs
+ (list r-knitr))
(home-page "https://parsnip.tidymodels.org")
(synopsis "Common API to modeling and analysis functions")
(description
@@ -28236,19 +27411,19 @@ functions or computational engines (e.g. R, Spark, Stan, etc).")
(properties `((upstream-name . "infer")))
(build-system r-build-system)
(propagated-inputs
- `(("r-broom" ,r-broom)
- ("r-dplyr" ,r-dplyr)
- ("r-generics" ,r-generics)
- ("r-ggplot2" ,r-ggplot2)
- ("r-glue" ,r-glue)
- ("r-magrittr" ,r-magrittr)
- ("r-patchwork" ,r-patchwork)
- ("r-purrr" ,r-purrr)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)))
+ (list r-broom
+ r-dplyr
+ r-generics
+ r-ggplot2
+ r-glue
+ r-magrittr
+ r-patchwork
+ r-purrr
+ r-rlang
+ r-tibble
+ r-tidyr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/tidymodels/infer")
(synopsis "Tidy statistical inference")
(description
@@ -28290,8 +27465,7 @@ model-related packages.")
(properties `((upstream-name . "conflicted")))
(build-system r-build-system)
(propagated-inputs
- `(("r-memoise" ,r-memoise)
- ("r-rlang" ,r-rlang)))
+ (list r-memoise r-rlang))
(home-page "https://github.com/r-lib/conflicted")
(synopsis "Alternative conflict resolution strategy")
(description
@@ -28317,31 +27491,29 @@ use.")
(properties `((upstream-name . "tidymodels")))
(build-system r-build-system)
(propagated-inputs
- `(("r-broom" ,r-broom)
- ("r-cli" ,r-cli)
- ("r-conflicted" ,r-conflicted)
- ("r-dials" ,r-dials)
- ("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-hardhat" ,r-hardhat)
- ("r-infer" ,r-infer)
- ("r-modeldata" ,r-modeldata)
- ("r-parsnip" ,r-parsnip)
- ("r-purrr" ,r-purrr)
- ("r-recipes" ,r-recipes)
- ("r-rlang" ,r-rlang)
- ("r-rsample" ,r-rsample)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)
- ("r-tune" ,r-tune)
- ("r-workflows" ,r-workflows)
- ("r-workflowsets" ,r-workflowsets)
- ("r-yardstick" ,r-yardstick)))
- (native-inputs
- `(("r-knitr" ,r-knitr)
- ("r-rmarkdown" ,r-rmarkdown)
- ("pandoc" ,pandoc)))
+ (list r-broom
+ r-cli
+ r-conflicted
+ r-dials
+ r-dplyr
+ r-ggplot2
+ r-hardhat
+ r-infer
+ r-modeldata
+ r-parsnip
+ r-purrr
+ r-recipes
+ r-rlang
+ r-rsample
+ r-rstudioapi
+ r-tibble
+ r-tidyr
+ r-tune
+ r-workflows
+ r-workflowsets
+ r-yardstick))
+ (native-inputs
+ (list r-knitr r-rmarkdown pandoc))
(home-page "https://github.com/tidymodels/tidymodels")
(synopsis "Tidy collection for modeling and statistical analysis")
(description
@@ -28364,7 +27536,7 @@ data structures of the tidyverse.")
(properties `((upstream-name . "lsa")))
(build-system r-build-system)
(propagated-inputs
- `(("r-snowballc" ,r-snowballc)))
+ (list r-snowballc))
(home-page "https://cran.r-project.org/package=lsa")
(synopsis "Latent semantic analysis")
(description
@@ -28417,8 +27589,7 @@ package also provides functions to visualize the observed data and the MLE.")
(properties `((upstream-name . "metafor")))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)
- ("r-nlme" ,r-nlme)))
+ (list r-matrix r-nlme))
(home-page "https://cran.r-project.org/web/packages/metafor/")
(synopsis "Meta-analysis package for R")
(description
@@ -28454,11 +27625,7 @@ phylogenetic relatedness) can also be conducted.")
(properties `((upstream-name . "altmeta")))
(build-system r-build-system)
(propagated-inputs
- `(("r-coda" ,r-coda)
- ("r-lme4" ,r-lme4)
- ("r-matrix" ,r-matrix)
- ("r-metafor" ,r-metafor)
- ("r-rjags" ,r-rjags)))
+ (list r-coda r-lme4 r-matrix r-metafor r-rjags))
(home-page "https://cran.r-project.org/web/packages/altmeta/")
(synopsis "Alternative meta-analysis methods")
(description
@@ -28536,12 +27703,12 @@ genome scans.")
(base32 "0ppc6dzlq77mppxc6bczai9gi40jrbxd1466y2cn2s8a4ah1jg9y"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-jsonlite" ,r-jsonlite)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)
- ("r-rsqlite" ,r-rsqlite)
- ("r-yaml" ,r-yaml)))
+ (list r-data-table
+ r-jsonlite
+ r-rcpp
+ r-rcppeigen
+ r-rsqlite
+ r-yaml))
(home-page "https://kbroman.org/qtl2/")
(synopsis "Quantitative Trait Locus Mapping in Experimental Crosses")
(description
@@ -28564,7 +27731,7 @@ designs. Broman et al. (2018) <doi:10.1534/genetics.118.301595>.")
"097313x72jr2q6dp8ma33w8kyp3gfw71snf1qx2maxbwwnysk085"))))
(build-system r-build-system)
(inputs
- `(("zlib" ,zlib)))
+ (list zlib))
(home-page "http://seqminer.genomic.codes")
(synopsis "Read nucleotide sequence data (VCF, BCF, and METAL formats)")
(description
@@ -28587,7 +27754,7 @@ data (variant call format, e.g. VCF or BCF) or meta-analysis results in R.")
(properties `((upstream-name . "MALDIquant")))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/web/packages/MALDIquant")
(synopsis "Quantitative analysis of mass spectrometry data")
(description
@@ -28615,8 +27782,7 @@ as allowing spectra with different resolutions.")
(properties `((upstream-name . "scattermore")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-scales" ,r-scales)))
+ (list r-ggplot2 r-scales))
(home-page "https://github.com/exaexa/scattermore")
(synopsis "Scatterplots with more points")
(description
@@ -28638,10 +27804,7 @@ data to rasters. It speeds up plotting of data with millions of points.")
(properties `((upstream-name . "SeuratObject")))
(build-system r-build-system)
(propagated-inputs
- `(("r-matrix" ,r-matrix)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)
- ("r-rlang" ,r-rlang)))
+ (list r-matrix r-rcpp r-rcppeigen r-rlang))
(home-page "https://satijalab.org/seurat")
(synopsis "Data structures for single cell data")
(description
@@ -28665,49 +27828,49 @@ other R users.")
(properties `((upstream-name . "Seurat")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cluster" ,r-cluster)
- ("r-cowplot" ,r-cowplot)
- ("r-fitdistrplus" ,r-fitdistrplus)
- ("r-future" ,r-future)
- ("r-future-apply" ,r-future-apply)
- ("r-ggplot2" ,r-ggplot2)
- ("r-ggrepel" ,r-ggrepel)
- ("r-ggridges" ,r-ggridges)
- ("r-httr" ,r-httr)
- ("r-ica" ,r-ica)
- ("r-igraph" ,r-igraph)
- ("r-irlba" ,r-irlba)
- ("r-jsonlite" ,r-jsonlite)
- ("r-kernsmooth" ,r-kernsmooth)
- ("r-leiden" ,r-leiden)
- ("r-lmtest" ,r-lmtest)
- ("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-matrixstats" ,r-matrixstats)
- ("r-miniui" ,r-miniui)
- ("r-patchwork" ,r-patchwork)
- ("r-pbapply" ,r-pbapply)
- ("r-plotly" ,r-plotly)
- ("r-png" ,r-png)
- ("r-rann" ,r-rann)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppannoy" ,r-rcppannoy)
- ("r-rcppeigen" ,r-rcppeigen)
- ("r-rcppprogress" ,r-rcppprogress)
- ("r-reticulate" ,r-reticulate)
- ("r-rlang" ,r-rlang)
- ("r-rocr" ,r-rocr)
- ("r-rtsne" ,r-rtsne)
- ("r-scales" ,r-scales)
- ("r-scattermore" ,r-scattermore)
- ("r-sctransform" ,r-sctransform)
- ("r-seuratobject" ,r-seuratobject)
- ("r-shiny" ,r-shiny)
- ("r-spatstat-core" ,r-spatstat-core)
- ("r-spatstat-geom" ,r-spatstat-geom)
- ("r-tibble" ,r-tibble)
- ("r-uwot" ,r-uwot)))
+ (list r-cluster
+ r-cowplot
+ r-fitdistrplus
+ r-future
+ r-future-apply
+ r-ggplot2
+ r-ggrepel
+ r-ggridges
+ r-httr
+ r-ica
+ r-igraph
+ r-irlba
+ r-jsonlite
+ r-kernsmooth
+ r-leiden
+ r-lmtest
+ r-mass
+ r-matrix
+ r-matrixstats
+ r-miniui
+ r-patchwork
+ r-pbapply
+ r-plotly
+ r-png
+ r-rann
+ r-rcolorbrewer
+ r-rcpp
+ r-rcppannoy
+ r-rcppeigen
+ r-rcppprogress
+ r-reticulate
+ r-rlang
+ r-rocr
+ r-rtsne
+ r-scales
+ r-scattermore
+ r-sctransform
+ r-seuratobject
+ r-shiny
+ r-spatstat-core
+ r-spatstat-geom
+ r-tibble
+ r-uwot))
(home-page "http://www.satijalab.org/seurat")
(synopsis "Seurat is an R toolkit for single cell genomics")
(description
@@ -28737,18 +27900,18 @@ discovery of differentially expressed genes and markers.")
(properties `((upstream-name . "SeuratDisk")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cli" ,r-cli)
- ("r-crayon" ,r-crayon)
- ("r-hdf5r" ,r-hdf5r)
- ("r-matrix" ,r-matrix)
- ("r-r6" ,r-r6)
- ("r-rlang" ,r-rlang)
- ("r-seurat" ,r-seurat)
- ("r-seuratobject" ,r-seuratobject)
- ("r-stringi" ,r-stringi)
- ("r-withr" ,r-withr)))
+ (list r-cli
+ r-crayon
+ r-hdf5r
+ r-matrix
+ r-r6
+ r-rlang
+ r-seurat
+ r-seuratobject
+ r-stringi
+ r-withr))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/mojaveazure/seurat-disk")
(synopsis "Interfaces for HDF5-based single cell file formats")
(description
@@ -28787,9 +27950,7 @@ goal of enhancing interoperability between Seurat and Scanpy.")
(add-after 'unpack 'set-HOME
(lambda _ (setenv "HOME" "/tmp"))))))
(propagated-inputs
- `(("r-cli" ,r-cli)
- ("r-crayon" ,r-crayon)
- ("r-rappdirs" ,r-rappdirs)))
+ (list r-cli r-crayon r-rappdirs))
(home-page "https://github.com/satijalab/seurat-data")
(synopsis "Install and manage Seurat datasets")
(description
@@ -28813,14 +27974,14 @@ distributed as independent packages.")
"1pg5lfc5m4ccphswbfbihj91ppmqhf4084kbjlmfsrqxylsyy8ch"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ape" ,r-ape)
- ("r-fastmatch" ,r-fastmatch)
- ("r-igraph" ,r-igraph)
- ("r-matrix" ,r-matrix)
- ("r-quadprog" ,r-quadprog)
- ("r-rcpp" ,r-rcpp)))
+ (list r-ape
+ r-fastmatch
+ r-igraph
+ r-matrix
+ r-quadprog
+ r-rcpp))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/KlausVigo/phangorn")
(synopsis "Phylogenetic analysis in R")
(description
@@ -28842,13 +28003,10 @@ Maximum Parsimony, distance methods and Hadamard conjugation.")
"0rzrk7xsn4gy271pbcw3azndhx0c06bmsgrg6libjmlfnmq6j8sc"))))
(build-system r-build-system)
(native-inputs
- `(("gfortran" ,gfortran)))
- (inputs `(("fftw" ,fftw) ("gsl" ,gsl)))
+ (list gfortran))
+ (inputs (list fftw gsl))
(propagated-inputs
- `(("r-ape" ,r-ape)
- ("r-desolve" ,r-desolve)
- ("r-rcpp" ,r-rcpp)
- ("r-subplex" ,r-subplex)))
+ (list r-ape r-desolve r-rcpp r-subplex))
(home-page "https://www.zoology.ubc.ca/prog/diversitree")
(synopsis "Comparative 'phylogenetic' analyses of diversification")
(description "This package contains a number of comparative \"phylogenetic\"
@@ -28874,9 +28032,9 @@ rate speciation and extinction.")
(properties `((upstream-name . "calculus")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)))
+ (list r-rcpp))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/eguidotti/calculus")
(synopsis "High dimensional numerical and symbolic calculus")
(description
@@ -28904,7 +28062,7 @@ parabolic or user defined by custom scale factors.")
(properties `((upstream-name . "decon")))
(build-system r-build-system)
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page
"https://cran.r-project.org/web/packages/decon/")
(synopsis "Deconvolution Estimation in Measurement Error Models")
@@ -28963,11 +28121,7 @@ kernel estimators.")
(properties `((upstream-name . "lpme")))
(build-system r-build-system)
(propagated-inputs
- `(("r-decon" ,r-decon)
- ("r-flexmix" ,r-flexmix)
- ("r-locpol" ,r-locpol)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)))
+ (list r-decon r-flexmix r-locpol r-rcpp r-rcpparmadillo))
(home-page
"https://cran.r-project.org/web/packages/lpme/")
(synopsis "Nonparametric Estimation of Measurement Error Models")
@@ -28992,8 +28146,7 @@ also provided for each method.")
(properties `((upstream-name . "aws.signature")))
(build-system r-build-system)
(propagated-inputs
- `(("r-base64enc" ,r-base64enc)
- ("r-digest" ,r-digest)))
+ (list r-base64enc r-digest))
(home-page "https://github.com/cloudyr/aws.signature")
(synopsis "Amazon Web Services Request Signatures")
(description
@@ -29017,12 +28170,12 @@ use on EC2 instances, the package 'aws.ec2metadata' is suggested.")
(properties `((upstream-name . "aws.s3")))
(build-system r-build-system)
(propagated-inputs
- `(("r-aws-signature" ,r-aws-signature)
- ("r-base64enc" ,r-base64enc)
- ("r-curl" ,r-curl)
- ("r-digest" ,r-digest)
- ("r-httr" ,r-httr)
- ("r-xml2" ,r-xml2)))
+ (list r-aws-signature
+ r-base64enc
+ r-curl
+ r-digest
+ r-httr
+ r-xml2))
(home-page "https://github.com/cloudyr/aws.s3")
(synopsis "AWS S3 Client Package")
(description
@@ -29042,9 +28195,9 @@ Services (AWS) Simple Storage Service (S3) REST API.")
"18s92qyakhvp336kk2777ydypwfrfwfz6a1gqkq812zy3kcb4mcc"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-r6" ,r-r6)))
+ (list r-r6))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://s-fleck.github.io/lgr/")
(synopsis "Fully featured logging framework")
(description "This package offers a flexible, feature-rich yet
@@ -29086,8 +28239,7 @@ well as email and push notifications.")
"1qlqfan5akz42zwkcz3ncln6rd9c302dy4cyp7nx0jcafr5i459f"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-checkmate" ,r-checkmate)
- ("r-prroc" ,r-prroc)))
+ (list r-checkmate r-prroc))
(home-page "https://mlr3measures.mlr-org.com/")
(synopsis "Performance measures for mlr3")
(description "This package implements multiple performance measures for
@@ -29109,11 +28261,7 @@ are.")
"1ax1mvnm8xjcskq12x63jkal766v1zwilpgrkdv6yawd7yrww4q9"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-backports" ,r-backports)
- ("r-checkmate" ,r-checkmate)
- ("r-data-table" ,r-data-table)
- ("r-digest" ,r-digest)
- ("r-r6" ,r-r6)))
+ (list r-backports r-checkmate r-data-table r-digest r-r6))
(home-page "https://mlr3misc.mlr-org.com/")
(synopsis "Helper functions for mlr3")
(description "@code{mlr3misc} provides frequently used helper functions
@@ -29135,11 +28283,7 @@ package also supersedes the package @code{BBmisc}.")
"1difp0bzsfxcmbm1snahh3i6417k1a2w4mnjx65p20n2yiclmrgs"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-backports" ,r-backports)
- ("r-checkmate" ,r-checkmate)
- ("r-data-table" ,r-data-table)
- ("r-mlr3misc" ,r-mlr3misc)
- ("r-r6" ,r-r6)))
+ (list r-backports r-checkmate r-data-table r-mlr3misc r-r6))
(home-page "https://paradox.mlr-org.com/")
(synopsis "Define and work with parameter spaces for complex algorithms")
(description "With this package it is possible to define parameter spaces,
@@ -29160,20 +28304,20 @@ implemented as @code{R6} classes.")
"1729wbdp62cjjk775qxrahyskp191s9qqnmqbxncfjrpdxphxk34"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-r6" ,r-r6)
- ("r-backports" ,r-backports)
- ("r-checkmate" ,r-checkmate)
- ("r-data-table" ,r-data-table)
- ("r-future" ,r-future)
- ("r-future-apply" ,r-future-apply)
- ("r-lgr" ,r-lgr)
- ("r-mlbench" ,r-mlbench)
- ("r-mlr3measures" ,r-mlr3measures)
- ("r-mlr3misc" ,r-mlr3misc)
- ("r-palmerpenguins" ,r-palmerpenguins)
- ("r-paradox" ,r-paradox)
- ("r-parallelly" ,r-parallelly)
- ("r-uuid" ,r-uuid)))
+ (list r-r6
+ r-backports
+ r-checkmate
+ r-data-table
+ r-future
+ r-future-apply
+ r-lgr
+ r-mlbench
+ r-mlr3measures
+ r-mlr3misc
+ r-palmerpenguins
+ r-paradox
+ r-parallelly
+ r-uuid))
(home-page "https://mlr3.mlr-org.com/")
(synopsis "Machine Learning in R - Next Generation")
(description "@code{mlr3} enables efficient, object-oriented programming
@@ -29196,12 +28340,12 @@ computational operations, add-on packages provide additional functionality.")
"1yc3mrk1b9h1k342wnw7sm4zmcw7w31l5ybh558g88f5hmibdl98"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-checkmate" ,r-checkmate)
- ("r-data-table" ,r-data-table)
- ("r-mlr3" ,r-mlr3)
- ("r-mlr3misc" ,r-mlr3misc)
- ("r-paradox" ,r-paradox)
- ("r-r6" ,r-r6)))
+ (list r-checkmate
+ r-data-table
+ r-mlr3
+ r-mlr3misc
+ r-paradox
+ r-r6))
(home-page "https://mlr3learners.mlr-org.com/")
(synopsis "Recommended Learners for @code{mlr3}")
(description "@code{mlr3learners} extends @code{mlr3} and @code{mlr3proba}
@@ -29225,14 +28369,14 @@ vector machines, and gradient boosting.")
(properties `((upstream-name . "bbotk")))
(build-system r-build-system)
(propagated-inputs
- `(("r-checkmate" ,r-checkmate)
- ("r-data-table" ,r-data-table)
- ("r-lgr" ,r-lgr)
- ("r-mlr3misc" ,r-mlr3misc)
- ("r-paradox" ,r-paradox)
- ("r-r6" ,r-r6)))
+ (list r-checkmate
+ r-data-table
+ r-lgr
+ r-mlr3misc
+ r-paradox
+ r-r6))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://bbotk.mlr-org.com")
(synopsis "Black-Box Optimization Toolkit")
(description "This package provides a common framework for optimization of
@@ -29253,15 +28397,15 @@ annealing.")
"0i428kdbak81j1wlwmdf9y40hqi63azhyny802ms2z04wl8lwnvs"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-bbotk" ,r-bbotk)
- ("r-checkmate" ,r-checkmate)
- ("r-data-table" ,r-data-table)
- ("r-digest" ,r-digest)
- ("r-lgr" ,r-lgr)
- ("r-mlr3" ,r-mlr3)
- ("r-mlr3misc" ,r-mlr3misc)
- ("r-paradox" ,r-paradox)
- ("r-r6" ,r-r6)))
+ (list r-bbotk
+ r-checkmate
+ r-data-table
+ r-digest
+ r-lgr
+ r-mlr3
+ r-mlr3misc
+ r-paradox
+ r-r6))
(home-page "https://mlr3tuning.mlr-org.com/")
(synopsis "Tuning for @code{mlr3}")
(description "@code{mlr3tuning} implements methods for hyperparameter
@@ -29333,8 +28477,7 @@ itself."))))
(properties `((upstream-name . "fontquiver")))
(build-system r-build-system)
(propagated-inputs
- `(("r-fontbitstreamvera" ,r-fontbitstreamvera)
- ("r-fontliberation" ,r-fontliberation)))
+ (list r-fontbitstreamvera r-fontliberation))
(home-page "https://cran.r-project.org/package=fontquiver")
(synopsis "Set of installed fonts")
(description
@@ -29375,7 +28518,7 @@ avoid system fonts to make sure your outputs are reproducible.")
(copy-recursively (string-append harfbuzz "/include")
"src/target/include")))))))
(propagated-inputs
- `(("r-fontquiver" ,r-fontquiver)))
+ (list r-fontquiver))
;; This may defeat the purpose of this package as our versions of freetype
;; and harfbuzz obviously differ from the tarballs offered by this
;; project. On the other hand, Guix arguably does a better job at
@@ -29407,7 +28550,7 @@ avoid system fonts to make sure your outputs are reproducible.")
"--without-fontconfig"
"--without-glib")))))))
(inputs
- `(("zlib" ,zlib)))
+ (list zlib))
(home-page "https://cran.r-project.org/package=freetypeharfbuzz")
(synopsis "Deterministic computation of text box metrics")
(description
@@ -29432,17 +28575,16 @@ unit tests of graphics).")
(properties `((upstream-name . "vdiffr")))
(build-system r-build-system)
(inputs
- `(("libpng" ,libpng)
- ("zlib" ,zlib)))
- (propagated-inputs
- `(("r-cpp11" ,r-cpp11)
- ("r-diffobj" ,r-diffobj)
- ("r-glue" ,r-glue)
- ("r-htmltools" ,r-htmltools)
- ("r-lifecycle" ,r-lifecycle)
- ("r-rlang" ,r-rlang)
- ("r-testthat" ,r-testthat)
- ("r-xml2" ,r-xml2)))
+ (list libpng zlib))
+ (propagated-inputs
+ (list r-cpp11
+ r-diffobj
+ r-glue
+ r-htmltools
+ r-lifecycle
+ r-rlang
+ r-testthat
+ r-xml2))
(home-page "https://github.com/r-lib/vdiffr")
(synopsis "Visual regression testing and graphical diffing")
(description
@@ -29487,17 +28629,17 @@ chunks.")
(properties `((upstream-name . "clustree")))
(build-system r-build-system)
(propagated-inputs
- `(("r-checkmate" ,r-checkmate)
- ("r-dplyr" ,r-dplyr)
- ("r-ggplot2" ,r-ggplot2)
- ("r-ggraph" ,r-ggraph)
- ("r-ggrepel" ,r-ggrepel)
- ("r-igraph" ,r-igraph)
- ("r-rlang" ,r-rlang)
- ("r-tidygraph" ,r-tidygraph)
- ("r-viridis" ,r-viridis)))
+ (list r-checkmate
+ r-dplyr
+ r-ggplot2
+ r-ggraph
+ r-ggrepel
+ r-igraph
+ r-rlang
+ r-tidygraph
+ r-viridis))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/lazappi/clustree")
(synopsis "Visualize clusterings at different resolutions")
(description
@@ -29522,16 +28664,11 @@ clusterings as resolution increases.")
(properties `((upstream-name . "textshaping")))
(build-system r-build-system)
(inputs
- `(("freetype" ,freetype)
- ("fribidi" ,fribidi)
- ("harfbuzz" ,harfbuzz)
- ("zlib" ,zlib)))
+ (list freetype fribidi harfbuzz zlib))
(propagated-inputs
- `(("r-cpp11" ,r-cpp11)
- ("r-systemfonts" ,r-systemfonts)))
+ (list r-cpp11 r-systemfonts))
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("r-knitr" ,r-knitr)))
+ (list pkg-config r-knitr))
(home-page "https://github.com/r-lib/textshaping")
(synopsis "Bindings to the HarfBuzz and Fribidi libraries for text shaping")
(description
@@ -29561,10 +28698,9 @@ the font tool-set provided by the @code{systemfonts} package.")
("libtiff" ,libtiff)
("zlib" ,zlib)))
(propagated-inputs
- `(("r-systemfonts" ,r-systemfonts)
- ("r-textshaping" ,r-textshaping)))
+ (list r-systemfonts r-textshaping))
(native-inputs
- `(("pkg-config" ,pkg-config)))
+ (list pkg-config))
(home-page "https://ragg.r-lib.org")
(synopsis "Graphic devices based on AGG")
(description
@@ -29588,15 +28724,15 @@ AGG to use as alternative to the raster devices provided through the
(properties `((upstream-name . "downlit")))
(build-system r-build-system)
(propagated-inputs
- `(("r-brio" ,r-brio)
- ("r-desc" ,r-desc)
- ("r-digest" ,r-digest)
- ("r-evaluate" ,r-evaluate)
- ("r-fansi" ,r-fansi)
- ("r-memoise" ,r-memoise)
- ("r-rlang" ,r-rlang)
- ("r-vctrs" ,r-vctrs)
- ("r-yaml" ,r-yaml)))
+ (list r-brio
+ r-desc
+ r-digest
+ r-evaluate
+ r-fansi
+ r-memoise
+ r-rlang
+ r-vctrs
+ r-yaml))
(home-page "https://downlit.r-lib.org/")
(synopsis "Syntax highlighting and automatic linking")
(description
@@ -29620,30 +28756,30 @@ in output to the equivalent HTML.")
"1k31biyvxkv3xjc1yy3nzb9wfza3vbx97fv17nly5a6vlv7zqbs4"))))
(properties `((upstream-name . "pkgdown")))
(build-system r-build-system)
- (inputs `(("pandoc" ,pandoc)))
- (propagated-inputs
- `(("r-callr" ,r-callr)
- ("r-crayon" ,r-crayon)
- ("r-desc" ,r-desc)
- ("r-digest" ,r-digest)
- ("r-downlit" ,r-downlit)
- ("r-fs" ,r-fs)
- ("r-httr" ,r-httr)
- ("r-magrittr" ,r-magrittr)
- ("r-memoise" ,r-memoise)
- ("r-openssl" ,r-openssl)
- ("r-purrr" ,r-purrr)
- ("r-ragg" ,r-ragg)
- ("r-rematch2" ,r-rematch2)
- ("r-rlang" ,r-rlang)
- ("r-rmarkdown" ,r-rmarkdown)
- ("r-tibble" ,r-tibble)
- ("r-whisker" ,r-whisker)
- ("r-withr" ,r-withr)
- ("r-xml2" ,r-xml2)
- ("r-yaml" ,r-yaml)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (inputs (list pandoc))
+ (propagated-inputs
+ (list r-callr
+ r-crayon
+ r-desc
+ r-digest
+ r-downlit
+ r-fs
+ r-httr
+ r-magrittr
+ r-memoise
+ r-openssl
+ r-purrr
+ r-ragg
+ r-rematch2
+ r-rlang
+ r-rmarkdown
+ r-tibble
+ r-whisker
+ r-withr
+ r-xml2
+ r-yaml))
+ (native-inputs
+ (list r-knitr))
(home-page "https://pkgdown.r-lib.org")
(synopsis "Make static HTML documentation for an R package")
(description
@@ -29667,7 +28803,7 @@ package online.")
(properties `((upstream-name . "prereg")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rmarkdown" ,r-rmarkdown)))
+ (list r-rmarkdown))
(home-page "https://github.com/crsh/prereg")
(synopsis
"R Markdown Templates to preregister Scientific Studies")
@@ -29690,16 +28826,16 @@ preregistration documents for scientific studies in PDF format.")
(properties `((upstream-name . "ez")))
(build-system r-build-system)
(propagated-inputs
- `(("r-car" ,r-car)
- ("r-ggplot2" ,r-ggplot2)
- ("r-lme4" ,r-lme4)
- ("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-mgcv" ,r-mgcv)
- ("r-plyr" ,r-plyr)
- ("r-reshape2" ,r-reshape2)
- ("r-scales" ,r-scales)
- ("r-stringr" ,r-stringr)))
+ (list r-car
+ r-ggplot2
+ r-lme4
+ r-mass
+ r-matrix
+ r-mgcv
+ r-plyr
+ r-reshape2
+ r-scales
+ r-stringr))
(home-page "https://github.com/mike-lawrence/ez")
(synopsis "Easy Analysis and Visualization of Factorial Experiments")
(description
@@ -29729,7 +28865,7 @@ visualized at any level of the experiment's design.")
"1xa8q1way3gjadrjh3mv3xr4c6b4h16nd2c6lgl969difplpfz9p"))))
(properties `((upstream-name . "qdapRegex")))
(build-system r-build-system)
- (propagated-inputs `(("r-stringi" ,r-stringi)))
+ (propagated-inputs (list r-stringi))
(home-page
"https://trinker.github.com/qdapRegex/")
(synopsis
@@ -29755,7 +28891,7 @@ percentages, citations, person tags, phone numbers, times, and zip codes.")
"1mci6x65h94qiz9cwikx2inbrwkykv43zbs8abfbx416zrh2bbn9"))))
(properties `((upstream-name . "mgsub")))
(build-system r-build-system)
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (native-inputs (list r-knitr))
(home-page
"https://cran.r-project.org/package=mgsub")
(synopsis
@@ -29780,9 +28916,7 @@ in same length matches).")
(properties `((upstream-name . "textshape")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-slam" ,r-slam)
- ("r-stringi" ,r-stringi)))
+ (list r-data-table r-slam r-stringi))
(home-page "https://github.com/trinker/textshape")
(synopsis "Tools for Reshaping Text")
(description
@@ -29803,14 +28937,14 @@ in same length matches).")
(properties `((upstream-name . "syuzhet")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
- ("r-dtt" ,r-dtt)
- ("r-nlp" ,r-nlp)
- ("r-rlang" ,r-rlang)
- ("r-textshape" ,r-textshape)
- ("r-tidyr" ,r-tidyr)
- ("r-zoo" ,r-zoo)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-dplyr
+ r-dtt
+ r-nlp
+ r-rlang
+ r-textshape
+ r-tidyr
+ r-zoo))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/mjockers/syuzhet")
(synopsis
"Extracts Sentiment and Sentiment-Derived Plot Arcs from Text")
@@ -29841,8 +28975,7 @@ normalization.")
(properties `((upstream-name . "lexicon")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-syuzhet" ,r-syuzhet)))
+ (list r-data-table r-syuzhet))
(home-page "https://github.com/trinker/lexicon")
(synopsis "Lexicons for Text Analysis")
(description
@@ -29863,7 +28996,7 @@ and word lists.")
"1g3nmy5p8wj3ix1vp1qmkmy3dyqisrw0md8cjrx4klqkp0wqlms9"))))
(properties `((upstream-name . "english")))
(build-system r-build-system)
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (native-inputs (list r-knitr))
(home-page
"https://cran.r-project.org/package=english")
(synopsis "Translate Integers into English")
@@ -29887,14 +29020,14 @@ indefinite article choice, \"a\" or \"an\".")
(properties `((upstream-name . "textclean")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-english" ,r-english)
- ("r-glue" ,r-glue)
- ("r-lexicon" ,r-lexicon)
- ("r-mgsub" ,r-mgsub)
- ("r-qdapregex" ,r-qdapregex)
- ("r-stringi" ,r-stringi)
- ("r-textshape" ,r-textshape)))
+ (list r-data-table
+ r-english
+ r-glue
+ r-lexicon
+ r-mgsub
+ r-qdapregex
+ r-stringi
+ r-textshape))
(home-page
"https://github.com/trinker/textclean")
(synopsis "Text Cleaning Tools")
@@ -29922,9 +29055,7 @@ text but not always easily handled by analysis algorithms. The
(properties `((upstream-name . "striprtf")))
(build-system r-build-system)
(propagated-inputs
- `(("r-magrittr" ,r-magrittr)
- ("r-rcpp" ,r-rcpp)
- ("r-stringr" ,r-stringr)))
+ (list r-magrittr r-rcpp r-stringr))
(home-page "https://github.com/kota7/striprtf")
(synopsis "Extract Text from RTF File")
(description
@@ -29959,11 +29090,9 @@ text but not always easily handled by analysis algorithms. The
(("PKG_LIBS = " all)
(string-append all "-lgzstream ")))
#t)))))
- (inputs `(("zlib" ,zlib) ("gzstream" ,gzstream)))
+ (inputs (list zlib gzstream))
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-rcpp" ,r-rcpp)
- ("r-tibble" ,r-tibble)))
+ (list r-data-table r-rcpp r-tibble))
(home-page "https://gitlab.com/hrbrmstr/ndjson")
(synopsis
"Wicked-Fast @dfn{Streaming JSON} (ndjson) Reader")
@@ -29992,9 +29121,7 @@ structures from them.")
(properties `((upstream-name . "streamR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ndjson" ,r-ndjson)
- ("r-rcurl" ,r-rcurl)
- ("r-rjson" ,r-rjson)))
+ (list r-ndjson r-rcurl r-rjson))
(home-page
"https://cran.r-project.org/package=streamR")
(synopsis
@@ -30018,11 +29145,8 @@ user streams, and to parse the output into data frames.")
(properties `((upstream-name . "readODS")))
(build-system r-build-system)
(propagated-inputs
- `(("r-cellranger" ,r-cellranger)
- ("r-readr" ,r-readr)
- ("r-stringi" ,r-stringi)
- ("r-xml2" ,r-xml2)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-cellranger r-readr r-stringi r-xml2))
+ (native-inputs (list r-knitr))
(home-page
"https://cran.r-project.org/package=readODS")
(synopsis "Read and Write ODS Files")
@@ -30059,13 +29183,10 @@ Also support writing data frame into ODS file.")
(setenv "EXTERNAL_QPDF" "1")
#t)))))
(inputs
- `(("zlib" ,zlib)
- ("qpdf" ,qpdf)))
+ (list zlib qpdf))
(propagated-inputs
- `(("r-askpass" ,r-askpass)
- ("r-curl" ,r-curl)
- ("r-rcpp" ,r-rcpp)))
- (native-inputs `(("pkg-config" ,pkg-config)))
+ (list r-askpass r-curl r-rcpp))
+ (native-inputs (list pkg-config))
(home-page "https://github.com/ropensci/qpdf")
(synopsis
"Split, Combine and Compress PDF Files")
@@ -30091,11 +29212,10 @@ data you need the @code{pdftools} package.")
(properties `((upstream-name . "pdftools")))
(build-system r-build-system)
(inputs
- `(("zlib" ,zlib)
- ("poppler" ,poppler)))
+ (list zlib poppler))
(propagated-inputs
- `(("r-qpdf" ,r-qpdf) ("r-rcpp" ,r-rcpp)))
- (native-inputs `(("pkg-config" ,pkg-config)))
+ (list r-qpdf r-rcpp))
+ (native-inputs (list pkg-config))
(home-page
"https://docs.ropensci.org/pdftools/")
(synopsis
@@ -30135,8 +29255,8 @@ further processing in R.")
(("system.file\\(\"bin\", package = \"antiword\"\\)")
(string-append "\"" (assoc-ref inputs "antiword") "/bin\"")))
#t)))))
- (inputs `(("antiword" ,antiword)))
- (propagated-inputs `(("r-sys" ,r-sys)))
+ (inputs (list antiword))
+ (propagated-inputs (list r-sys))
(home-page
"https://github.com/ropensci/antiword#readme")
(synopsis
@@ -30162,20 +29282,20 @@ latter.")
(properties `((upstream-name . "readtext")))
(build-system r-build-system)
(propagated-inputs
- `(("r-antiword" ,r-antiword)
- ("r-data-table" ,r-data-table)
- ("r-digest" ,r-digest)
- ("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-pdftools" ,r-pdftools)
- ("r-readods" ,r-readods)
- ("r-readxl" ,r-readxl)
- ("r-streamr" ,r-streamr)
- ("r-stringi" ,r-stringi)
- ("r-striprtf" ,r-striprtf)
- ("r-tibble" ,r-tibble)
- ("r-xml2" ,r-xml2)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-antiword
+ r-data-table
+ r-digest
+ r-httr
+ r-jsonlite
+ r-pdftools
+ r-readods
+ r-readxl
+ r-streamr
+ r-stringi
+ r-striprtf
+ r-tibble
+ r-xml2))
+ (native-inputs (list r-knitr))
(home-page
"https://github.com/quanteda/readtext")
(synopsis
@@ -30200,8 +29320,8 @@ and formatted text files with additional meta-data, such including @code{.csv},
"05pv5c4k4njkr0xw6i6ksiy34hcyx2lbiqpv5gxw81yrkm0rxfyk"))))
(properties `((upstream-name . "packcircles")))
(build-system r-build-system)
- (propagated-inputs `(("r-rcpp" ,r-rcpp)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (propagated-inputs (list r-rcpp))
+ (native-inputs (list r-knitr))
(home-page
"https://github.com/mbedward/packcircles")
(synopsis "Circle Packing")
@@ -30225,15 +29345,10 @@ and formatted text files with additional meta-data, such including @code{.csv},
(properties `((upstream-name . "lwgeom")))
(build-system r-build-system)
(inputs
- `(("geos" ,geos)
- ("proj" ,proj)
- ("sqlite" ,sqlite)
- ("zlib" ,zlib)))
+ (list geos proj sqlite zlib))
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-sf" ,r-sf)
- ("r-units" ,r-units)))
- (native-inputs `(("pkg-config" ,pkg-config)))
+ (list r-rcpp r-sf r-units))
+ (native-inputs (list pkg-config))
(home-page "https://github.com/r-spatial/lwgeom/")
(synopsis "Bindings to Selected 'liblwgeom' Functions for Simple Features")
(description
@@ -30256,13 +29371,13 @@ light-weight geometry library used by @url{http://postgis.net/,PostGIS}.")
(properties `((upstream-name . "stars")))
(build-system r-build-system)
(propagated-inputs
- `(("r-abind" ,r-abind)
- ("r-classint" ,r-classint)
- ("r-lwgeom" ,r-lwgeom)
- ("r-rlang" ,r-rlang)
- ("r-sf" ,r-sf)
- ("r-units" ,r-units)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-abind
+ r-classint
+ r-lwgeom
+ r-rlang
+ r-sf
+ r-units))
+ (native-inputs (list r-knitr))
(home-page "https://r-spatial.github.io/stars/")
(synopsis
"Spatiotemporal Arrays, Raster and Vector Data Cubes")
@@ -30286,15 +29401,15 @@ by @code{sf}, and @code{NetCDF} bindings by @code{ncmeta} and @code{RNetCDF}.")
(properties `((upstream-name . "tmaptools")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dichromat" ,r-dichromat)
- ("r-lwgeom" ,r-lwgeom)
- ("r-magrittr" ,r-magrittr)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-sf" ,r-sf)
- ("r-stars" ,r-stars)
- ("r-units" ,r-units)
- ("r-viridislite" ,r-viridislite)
- ("r-xml" ,r-xml)))
+ (list r-dichromat
+ r-lwgeom
+ r-magrittr
+ r-rcolorbrewer
+ r-sf
+ r-stars
+ r-units
+ r-viridislite
+ r-xml))
(home-page
"https://github.com/mtennekes/tmaptools")
(synopsis "Thematic Map Tools")
@@ -30318,9 +29433,7 @@ supply the workflow to create thematic maps. This package also facilitates
(properties `((upstream-name . "rworldmap")))
(build-system r-build-system)
(propagated-inputs
- `(("r-fields" ,r-fields)
- ("r-maptools" ,r-maptools)
- ("r-sp" ,r-sp)))
+ (list r-fields r-maptools r-sp))
(home-page
"https://github.com/AndySouth/rworldmap/")
(synopsis "Mapping Global Data")
@@ -30342,14 +29455,14 @@ supply the workflow to create thematic maps. This package also facilitates
(properties `((upstream-name . "rtweet")))
(build-system r-build-system)
(propagated-inputs
- `(("r-httpuv" ,r-httpuv)
- ("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-magrittr" ,r-magrittr)
- ("r-progress" ,r-progress)
- ("r-rcpp" ,r-rcpp)
- ("r-tibble" ,r-tibble)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-httpuv
+ r-httr
+ r-jsonlite
+ r-magrittr
+ r-progress
+ r-rcpp
+ r-tibble))
+ (native-inputs (list r-knitr))
(home-page
"https://docs.ropensci.org/rtweet/")
(synopsis "Collecting Twitter Data")
@@ -30393,12 +29506,8 @@ Application Program Interfaces (API)}.")
(properties `((upstream-name . "eyelinker")))
(build-system r-build-system)
(propagated-inputs
- `(("r-intervals" ,r-intervals)
- ("r-readr" ,r-readr)
- ("r-stringi" ,r-stringi)
- ("r-stringr" ,r-stringr)
- ("r-tibble" ,r-tibble)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-intervals r-readr r-stringi r-stringr r-tibble))
+ (native-inputs (list r-knitr))
(home-page
"https://github.com/a-hurst/eyelinker")
(synopsis
@@ -30421,7 +29530,7 @@ Application Program Interfaces (API)}.")
"0ab0wr8nbwn1w1j9hpwfz52lm1sw0qk93713y9k0hpm3pw9dq4jr"))))
(properties `((upstream-name . "BTM")))
(build-system r-build-system)
- (propagated-inputs `(("r-rcpp" ,r-rcpp)))
+ (propagated-inputs (list r-rcpp))
(home-page "https://github.com/bnosac/BTM")
(synopsis "Biterm Topic Models for Short Text")
(description
@@ -30452,7 +29561,7 @@ BTM-WWW13.pdf}.")
"0ijhmwclpg5czs2sl2vykcw8qj2pxy26xf6knh62rqq6p6sm43f4"))))
(properties `((upstream-name . "Delaporte")))
(build-system r-build-system)
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs (list gfortran))
(home-page "https://github.com/aadler/Delaporte")
(synopsis "Statistical functions for the Delaporte distribution")
(description
@@ -30504,8 +29613,7 @@ package.")
(properties `((upstream-name . "revgeo")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcurl" ,r-rcurl)
- ("r-rjsonio" ,r-rjsonio)))
+ (list r-rcurl r-rjsonio))
(home-page "https://cran.r-project.org/package=revgeo")
(synopsis "Reverse geocoding")
(description
@@ -30528,11 +29636,7 @@ minimal hassle.")
(properties `((upstream-name . "qpcR")))
(build-system r-build-system)
(propagated-inputs
- `(("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)
- ("r-minpack-lm" ,r-minpack-lm)
- ("r-rgl" ,r-rgl)
- ("r-robustbase" ,r-robustbase)))
+ (list r-mass r-matrix r-minpack-lm r-rgl r-robustbase))
(home-page "https://cran.r-project.org/package=qpcR")
(synopsis "Modelling and analysis of real-time PCR data")
(description
@@ -30555,10 +29659,8 @@ quantitative real-time polymerase chain reaction (qPCR).")
(properties `((upstream-name . "textplot")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-lattice" ,r-lattice)
- ("r-matrix" ,r-matrix)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-data-table r-lattice r-matrix))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/bnosac/textplot")
(synopsis "Text Plots")
(description
@@ -30648,8 +29750,8 @@ importance.")
"1dhba0yfxjd5rlqsxp5a7s2hclfkla9wigsr39dlma67l6qjjmxn"))))
(properties `((upstream-name . "elliptic")))
(build-system r-build-system)
- (inputs `(("pari-gp" ,pari-gp)))
- (propagated-inputs `(("r-mass" ,r-mass)))
+ (inputs (list pari-gp))
+ (propagated-inputs (list r-mass))
(home-page
"https://github.com/RobinHankin/elliptic")
(synopsis
@@ -30674,9 +29776,7 @@ complex functions.")
(properties `((upstream-name . "hypergeo")))
(build-system r-build-system)
(propagated-inputs
- `(("r-contfrac" ,r-contfrac)
- ("r-desolve" ,r-desolve)
- ("r-elliptic" ,r-elliptic)))
+ (list r-contfrac r-desolve r-elliptic))
(home-page
"https://cran.r-project.org/web/packages/hypergeo/")
(synopsis "The Gauss Hypergeometric Function")
@@ -30707,22 +29807,22 @@ complex functions.")
(string-append "'" (assoc-ref inputs "ffmpeg") "/bin/ffmpeg'"))))))))
(inputs
;; For video output.
- `(("ffmpeg" ,ffmpeg)))
- (propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-glue" ,r-glue)
- ("r-plyr" ,r-plyr)
- ("r-progress" ,r-progress)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)
- ("r-stringi" ,r-stringi)
- ("r-tweenr" ,r-tweenr)
- ;; For GIF/SVG output. gifski is faster, but depends on Rust.
- ("r-magick" ,r-magick)
- ;; For HTML output.
- ("r-base64enc" ,r-base64enc)
- ("r-htmltools" ,r-htmltools)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list ffmpeg))
+ (propagated-inputs
+ (list r-ggplot2
+ r-glue
+ r-plyr
+ r-progress
+ r-rlang
+ r-scales
+ r-stringi
+ r-tweenr
+ ;; For GIF/SVG output. gifski is faster, but depends on Rust.
+ r-magick
+ ;; For HTML output.
+ r-base64enc
+ r-htmltools))
+ (native-inputs (list r-knitr))
(home-page "https://gganimate.com")
(synopsis "Grammar of Animated Graphics")
(description
@@ -30748,7 +29848,7 @@ in order to customise how it should change with time.")
"1afmav7s29fb5cd920h6vrzg9cvc4jsidfalxpvhlh1b8mfr0df3"))))
(properties `((upstream-name . "tzdb")))
(build-system r-build-system)
- (propagated-inputs `(("r-cpp11" ,r-cpp11)))
+ (propagated-inputs (list r-cpp11))
(home-page "https://github.com/r-lib/tzdb")
(synopsis "Time Zone Database Information")
(description
@@ -30777,21 +29877,21 @@ time zone manipulations.")
(properties `((upstream-name . "vroom")))
(build-system r-build-system)
(propagated-inputs
- `(("r-bit64" ,r-bit64)
- ("r-cli" ,r-cli)
- ("r-cpp11" ,r-cpp11)
- ("r-crayon" ,r-crayon)
- ("r-glue" ,r-glue)
- ("r-hms" ,r-hms)
- ("r-lifecycle" ,r-lifecycle)
- ("r-progress" ,r-progress)
- ("r-rlang" ,r-rlang)
- ("r-tibble" ,r-tibble)
- ("r-tidyselect" ,r-tidyselect)
- ("r-tzdb" ,r-tzdb)
- ("r-vctrs" ,r-vctrs)
- ("r-withr" ,r-withr)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-bit64
+ r-cli
+ r-cpp11
+ r-crayon
+ r-glue
+ r-hms
+ r-lifecycle
+ r-progress
+ r-rlang
+ r-tibble
+ r-tidyselect
+ r-tzdb
+ r-vctrs
+ r-withr))
+ (native-inputs (list r-knitr))
(home-page "https://vroom.r-lib.org")
(synopsis
"Read and Write Rectangular Text Data")
@@ -30815,9 +29915,7 @@ asynchronously from formatting.")
"1ijjhfy3v91fspid77rrkc5dkcb2lav37wc3f4k5lwrn24wzy5y8"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-plyr" ,r-plyr)
- ("r-rcpp" ,r-rcpp)
- ("r-lattice" ,r-lattice)))
+ (list r-plyr r-rcpp r-lattice))
(home-page "https://cran.r-project.org/web/packages/Rmisc/")
(synopsis "Ryan Miscellaneous")
(description "The Rmisc library contains functions for data analysis and
@@ -30837,8 +29935,7 @@ utility operations.")
(properties `((upstream-name . "webutils")))
(build-system r-build-system)
(propagated-inputs
- `(("r-curl" ,r-curl)
- ("r-jsonlite" ,r-jsonlite)))
+ (list r-curl r-jsonlite))
(home-page "https://github.com/jeroen/webutils")
(synopsis "Utility functions for developing web applications")
(description
@@ -30861,13 +29958,11 @@ using either @code{httpuv} or @code{Rhttpd}.")
(properties `((upstream-name . "protolite")))
(build-system r-build-system)
(inputs
- `(("protobuf" ,protobuf)))
+ (list protobuf))
(propagated-inputs
- `(("r-jsonlite" ,r-jsonlite)
- ("r-rcpp" ,r-rcpp)))
+ (list r-jsonlite r-rcpp))
(native-inputs
- `(("protobuf" ,protobuf)
- ("pkg-config" ,pkg-config)))
+ (list protobuf pkg-config))
(home-page "https://github.com/jeroen/protolite")
(synopsis "Highly optimized protocol buffer serializers")
(description
@@ -30894,24 +29989,24 @@ reading and writing arbitrary protocol-buffer data in R.")
(properties `((upstream-name . "opencpu")))
(build-system r-build-system)
(inputs
- `(("pandoc" ,pandoc)))
- (propagated-inputs
- `(("r-brew" ,r-brew)
- ("r-curl" ,r-curl)
- ("r-evaluate" ,r-evaluate)
- ("r-httpuv" ,r-httpuv)
- ("r-jsonlite" ,r-jsonlite)
- ("r-knitr" ,r-knitr)
- ("r-mime" ,r-mime)
- ("r-openssl" ,r-openssl)
- ("r-protolite" ,r-protolite)
- ("r-rappdirs" ,r-rappdirs)
- ("r-remotes" ,r-remotes)
- ("r-sys" ,r-sys)
- ("r-webutils" ,r-webutils)
- ("r-zip" ,r-zip)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list pandoc))
+ (propagated-inputs
+ (list r-brew
+ r-curl
+ r-evaluate
+ r-httpuv
+ r-jsonlite
+ r-knitr
+ r-mime
+ r-openssl
+ r-protolite
+ r-rappdirs
+ r-remotes
+ r-sys
+ r-webutils
+ r-zip))
+ (native-inputs
+ (list r-knitr))
(home-page "https://www.opencpu.org")
(synopsis "API for embedded scientific computing")
(description
@@ -30937,13 +30032,11 @@ Apache2.")
"1gc1p9pgazhblk8jgykxxjpblylbaq5r9hdlw3ilz5g45yjjwcnc"))))
(properties `((upstream-name . "exactextractr")))
(build-system r-build-system)
- (inputs `(("geos" ,geos)))
+ (inputs (list geos))
(propagated-inputs
- `(("r-raster" ,r-raster)
- ("r-rcpp" ,r-rcpp)
- ("r-sf" ,r-sf)))
+ (list r-raster r-rcpp r-sf))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://isciences.gitlab.io/exactextractr/")
(synopsis "Fast extraction from raster datasets using polygons")
(description
@@ -30966,11 +30059,9 @@ the @code{raster} package that is suitable for extracting raster values using
(properties `((upstream-name . "stringfish")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("r-rcppparallel" ,r-rcppparallel)))
+ (list r-rcpp r-rcppparallel))
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("r-knitr" ,r-knitr)))
+ (list pkg-config r-knitr))
(home-page "https://github.com/traversc/stringfish")
(synopsis "Alternative string implementation")
(description
@@ -31015,14 +30106,11 @@ package.")
"077i181vh0izvsdy2d4366yir0ajg531g6d1s7ab044ssbphg38x"))))
(properties `((upstream-name . "qs")))
(build-system r-build-system)
- (inputs `(("zlib" ,zlib)))
+ (inputs (list zlib))
(propagated-inputs
- `(("r-rapiserialize" ,r-rapiserialize)
- ("r-rcpp" ,r-rcpp)
- ("r-stringfish" ,r-stringfish)))
+ (list r-rapiserialize r-rcpp r-stringfish))
(native-inputs
- `(("pkg-config" ,pkg-config)
- ("r-knitr" ,r-knitr)))
+ (list pkg-config r-knitr))
(home-page "https://github.com/traversc/qs")
(synopsis "Quick serialization of R objects")
(description
@@ -31044,9 +30132,9 @@ object to and from disk.")
(properties `((upstream-name . "rgeos")))
(build-system r-build-system)
(inputs
- `(("geos" ,geos)))
+ (list geos))
(propagated-inputs
- `(("r-sp" ,r-sp)))
+ (list r-sp))
(home-page "https://cran.r-project.org/package=rgeos")
(synopsis "Interface to Geometry Engine (GEOS)")
(description
@@ -31068,17 +30156,17 @@ C API for topology operations on geometries.")
(properties `((upstream-name . "tfruns")))
(build-system r-build-system)
(propagated-inputs
- `(("r-base64enc" ,r-base64enc)
- ("r-config" ,r-config)
- ("r-jsonlite" ,r-jsonlite)
- ("r-magrittr" ,r-magrittr)
- ("r-reticulate" ,r-reticulate)
- ("r-rlang" ,r-rlang)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-tidyselect" ,r-tidyselect)
- ("r-whisker" ,r-whisker)
- ("r-yaml" ,r-yaml)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-base64enc
+ r-config
+ r-jsonlite
+ r-magrittr
+ r-reticulate
+ r-rlang
+ r-rstudioapi
+ r-tidyselect
+ r-whisker
+ r-yaml))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/rstudio/tfruns")
(synopsis "Training run tools for TensorFlow")
(description
@@ -31101,10 +30189,9 @@ runs.")
"0fmaq1ggjyxgf2ss7qb8jk74sfwc3s1vc123pd5glclxcy1ib0j2"))))
(properties `((upstream-name . "tfautograph")))
(build-system r-build-system)
- (inputs `(("tensorflow" ,tensorflow)))
+ (inputs (list tensorflow))
(propagated-inputs
- `(("r-backports" ,r-backports)
- ("r-reticulate" ,r-reticulate)))
+ (list r-backports r-reticulate))
(home-page "https://t-kalinowski.github.io/tfautograph/")
(synopsis "Autograph R for Tensorflow")
(description
@@ -31125,15 +30212,15 @@ Tensorflow graphs.")
"0xgm8jb1hl8564vviqys3aqwzvfbh0d43m154cj07j9spdz306ng"))))
(properties `((upstream-name . "tensorflow")))
(build-system r-build-system)
- (inputs `(("tensorflow" ,tensorflow)))
+ (inputs (list tensorflow))
(propagated-inputs
- `(("r-config" ,r-config)
- ("r-processx" ,r-processx)
- ("r-reticulate" ,r-reticulate)
- ("r-rstudioapi" ,r-rstudioapi)
- ("r-tfautograph" ,r-tfautograph)
- ("r-tfruns" ,r-tfruns)
- ("r-yaml" ,r-yaml)))
+ (list r-config
+ r-processx
+ r-reticulate
+ r-rstudioapi
+ r-tfautograph
+ r-tfruns
+ r-yaml))
(home-page "https://github.com/rstudio/tensorflow")
(synopsis "R interface to TensorFlow")
(description
@@ -31157,17 +30244,17 @@ between them.")
(properties `((upstream-name . "keras")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ellipsis" ,r-ellipsis)
- ("r-generics" ,r-generics)
- ("r-glue" ,r-glue)
- ("r-magrittr" ,r-magrittr)
- ("r-r6" ,r-r6)
- ("r-reticulate" ,r-reticulate)
- ("r-rlang" ,r-rlang)
- ("r-tensorflow" ,r-tensorflow)
- ("r-tfruns" ,r-tfruns)
- ("r-zeallot" ,r-zeallot)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-ellipsis
+ r-generics
+ r-glue
+ r-magrittr
+ r-r6
+ r-reticulate
+ r-rlang
+ r-tensorflow
+ r-tfruns
+ r-zeallot))
+ (native-inputs (list r-knitr))
(home-page "https://keras.rstudio.com")
(synopsis "R Interface to 'Keras'")
(description
@@ -31192,10 +30279,9 @@ and GPU devices.")
(properties `((upstream-name . "zzlite")))
(build-system r-build-system)
(propagated-inputs
- `(("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)))
+ (list r-httr r-jsonlite))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://cran.r-project.org/package=zzlite")
(synopsis "Wrapper for the Zamzar file conversion API")
(description
@@ -31219,7 +30305,7 @@ files, images, movie formats, etc., etc.) through an R session.")
(properties `((upstream-name . "zTree")))
(build-system r-build-system)
(propagated-inputs
- `(("r-plyr" ,r-plyr)))
+ (list r-plyr))
(home-page "https://cran.r-project.org/package=zTree")
(synopsis "Functions to import data from z-Tree into R")
(description
@@ -31243,7 +30329,7 @@ carrying out economic experiments.")
`((upstream-name . "DistributionUtils")))
(build-system r-build-system)
(native-inputs
- `(("gfortran" ,gfortran)))
+ (list gfortran))
(home-page "https://cran.r-project.org/package=DistributionUtils")
(synopsis "Distribution utilities")
(description
@@ -31269,13 +30355,10 @@ Bessel K function.")
(properties `((upstream-name . "ztpln")))
(build-system r-build-system)
(propagated-inputs
- `(("r-distributionutils" ,r-distributionutils)
- ("r-mixtools" ,r-mixtools)
- ("r-rcpp" ,r-rcpp)
- ("r-rcppeigen" ,r-rcppeigen)
- ("r-rcppnumerical" ,r-rcppnumerical)))
+ (list r-distributionutils r-mixtools r-rcpp r-rcppeigen
+ r-rcppnumerical))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/mattocci27/ztpln")
(synopsis "Zero-truncated Poisson lognormal distribution")
(description
@@ -31298,9 +30381,9 @@ lognormal distribution and their mixture distribution.")
(properties `((upstream-name . "zscorer")))
(build-system r-build-system)
(propagated-inputs
- `(("r-shiny" ,r-shiny)))
+ (list r-shiny))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/nutriverse/zscorer")
(synopsis "Child Anthropometry z-Score Calculator")
(description
@@ -31325,8 +30408,7 @@ Standards.")
(properties `((upstream-name . "ZRA")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dygraphs" ,r-dygraphs)
- ("r-forecast" ,r-forecast)))
+ (list r-dygraphs r-forecast))
(home-page "https://cran.r-project.org/package=ZRA")
(synopsis "Dynamic plots for time series forecasting")
(description
@@ -31348,13 +30430,13 @@ with the dynamic plots from @code{dygraphs}.")
(properties `((upstream-name . "rfigshare")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-httpuv" ,r-httpuv)
- ("r-httr" ,r-httr)
- ("r-plyr" ,r-plyr)
- ("r-rjsonio" ,r-rjsonio)
- ("r-xml" ,r-xml)
- ("r-yaml" ,r-yaml)))
+ (list r-ggplot2
+ r-httpuv
+ r-httr
+ r-plyr
+ r-rjsonio
+ r-xml
+ r-yaml))
(home-page "https://github.com/ropensci/rfigshare")
(synopsis "R Interface to figshare")
(description
@@ -31376,10 +30458,7 @@ to archive and assign DOIs to data, software, figures, and more.")
(properties `((upstream-name . "dismo")))
(build-system r-build-system)
(propagated-inputs
- `(("r-raster" ,r-raster)
- ("r-rcpp" ,r-rcpp)
- ("r-sp" ,r-sp)
- ("r-terra" ,r-terra)))
+ (list r-raster r-rcpp r-sp r-terra))
(home-page "https://rspatial.org/raster/sdm/")
(synopsis "Species distribution modeling")
(description
@@ -31402,19 +30481,19 @@ of known occurrences of a species.")
(properties `((upstream-name . "zoon")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dismo" ,r-dismo)
- ("r-plyr" ,r-plyr)
- ("r-randomforest" ,r-randomforest)
- ("r-raster" ,r-raster)
- ("r-rcurl" ,r-rcurl)
- ("r-rfigshare" ,r-rfigshare)
- ("r-rgdal" ,r-rgdal)
- ("r-roxygen2" ,r-roxygen2)
- ("r-rworldmap" ,r-rworldmap)
- ("r-sp" ,r-sp)
- ("r-testthat" ,r-testthat)))
+ (list r-dismo
+ r-plyr
+ r-randomforest
+ r-raster
+ r-rcurl
+ r-rfigshare
+ r-rgdal
+ r-roxygen2
+ r-rworldmap
+ r-sp
+ r-testthat))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/zoonproject/zoon")
(synopsis "Reproducible, accessible and shareable species distribution modelling")
(description
@@ -31437,11 +30516,7 @@ fully reproducible.")
(properties `((upstream-name . "paws.common")))
(build-system r-build-system)
(propagated-inputs
- `(("r-base64enc" ,r-base64enc)
- ("r-digest" ,r-digest)
- ("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-xml2" ,r-xml2)))
+ (list r-base64enc r-digest r-httr r-jsonlite r-xml2))
(home-page "https://cran.r-project.org/package=paws.common")
(synopsis "Paws low-level Amazon Web Services API")
(description
@@ -31467,7 +30542,7 @@ Service (S3).")
`((upstream-name . "paws.customer.engagement")))
(build-system r-build-system)
(propagated-inputs
- `(("r-paws-common" ,r-paws-common)))
+ (list r-paws-common))
(home-page "https://github.com/paws-r/paws")
(synopsis "Amazon Web Services customer engagement services")
(description
@@ -31491,7 +30566,7 @@ service, and more.")
`((upstream-name . "paws.cost.management")))
(build-system r-build-system)
(propagated-inputs
- `(("r-paws-common" ,r-paws-common)))
+ (list r-paws-common))
(home-page "https://github.com/paws-r/paws")
(synopsis "Amazon Web Services cost management services")
(description
@@ -31513,7 +30588,7 @@ more.")
(properties `((upstream-name . "paws.developer.tools")))
(build-system r-build-system)
(propagated-inputs
- `(("r-paws-common" ,r-paws-common)))
+ (list r-paws-common))
(home-page "https://github.com/paws-r/paws")
(synopsis "Amazon Web Services developer tools services")
(description
@@ -31535,7 +30610,7 @@ deployment, and more.")
(properties `((upstream-name . "paws.end.user.computing")))
(build-system r-build-system)
(propagated-inputs
- `(("r-paws-common" ,r-paws-common)))
+ (list r-paws-common))
(home-page "https://github.com/paws-r/paws")
(synopsis "Amazon Web Services end user computing services")
(description
@@ -31559,7 +30634,7 @@ and more.")
`((upstream-name . "paws.application.integration")))
(build-system r-build-system)
(propagated-inputs
- `(("r-paws-common" ,r-paws-common)))
+ (list r-paws-common))
(home-page "https://github.com/paws-r/paws")
(synopsis "Amazon Web Services application integration services")
(description
@@ -31583,7 +30658,7 @@ Simple Notification Service (SNS) publish/subscribe messaging, and more.")
`((upstream-name . "paws.security.identity")))
(build-system r-build-system)
(propagated-inputs
- `(("r-paws-common" ,r-paws-common)))
+ (list r-paws-common))
(home-page "https://github.com/paws-r/paws")
(synopsis "Amazon Web Services security, identity, and compliance services")
(description
@@ -31608,7 +30683,7 @@ more.")
`((upstream-name . "paws.analytics")))
(build-system r-build-system)
(propagated-inputs
- `(("r-paws-common" ,r-paws-common)))
+ (list r-paws-common))
(home-page "https://github.com/paws-r/paws")
(synopsis "Amazon Web Services analytics services")
(description
@@ -31632,7 +30707,7 @@ Elasticsearch search engine, and more.")
`((upstream-name . "paws.machine.learning")))
(build-system r-build-system)
(propagated-inputs
- `(("r-paws-common" ,r-paws-common)))
+ (list r-paws-common))
(home-page "https://github.com/paws-r/paws")
(synopsis "Amazon Web Services machine learning services")
(description
@@ -31656,7 +30731,7 @@ natural language processing, speech recognition, translation, and more.")
`((upstream-name . "paws.management")))
(build-system r-build-system)
(propagated-inputs
- `(("r-paws-common" ,r-paws-common)))
+ (list r-paws-common))
(home-page "https://github.com/paws-r/paws")
(synopsis "Amazon Web Services management and governance services")
(description
@@ -31680,7 +30755,7 @@ monitoring, Auto Scaling for automatically scaling resources, and more.")
`((upstream-name . "paws.networking")))
(build-system r-build-system)
(propagated-inputs
- `(("r-paws-common" ,r-paws-common)))
+ (list r-paws-common))
(home-page "https://github.com/paws-r/paws")
(synopsis "Amazon Web Services networking and content delivery services")
(description
@@ -31703,7 +30778,7 @@ CloudFront content delivery, load balancing, and more.")
(properties `((upstream-name . "paws.database")))
(build-system r-build-system)
(propagated-inputs
- `(("r-paws-common" ,r-paws-common)))
+ (list r-paws-common))
(home-page "https://github.com/paws-r/paws")
(synopsis
"Amazon Web Services Database Services")
@@ -31727,7 +30802,7 @@ database, and more.")
(properties `((upstream-name . "paws.storage")))
(build-system r-build-system)
(propagated-inputs
- `(("r-paws-common" ,r-paws-common)))
+ (list r-paws-common))
(home-page "https://github.com/paws-r/paws")
(synopsis "Amazon Web Services storage services")
(description
@@ -31749,7 +30824,7 @@ services, including Simple Storage Service (S3).")
(properties `((upstream-name . "paws.compute")))
(build-system r-build-system)
(propagated-inputs
- `(("r-paws-common" ,r-paws-common)))
+ (list r-paws-common))
(home-page "https://github.com/paws-r/paws")
(synopsis "Amazon Web Services compute services")
(description
@@ -31772,19 +30847,19 @@ functions-as-a-service, containers, batch processing, and more.")
(properties `((upstream-name . "paws")))
(build-system r-build-system)
(propagated-inputs
- `(("r-paws-analytics" ,r-paws-analytics)
- ("r-paws-application-integration" ,r-paws-application-integration)
- ("r-paws-compute" ,r-paws-compute)
- ("r-paws-cost-management" ,r-paws-cost-management)
- ("r-paws-customer-engagement" ,r-paws-customer-engagement)
- ("r-paws-database" ,r-paws-database)
- ("r-paws-developer-tools" ,r-paws-developer-tools)
- ("r-paws-end-user-computing" ,r-paws-end-user-computing)
- ("r-paws-machine-learning" ,r-paws-machine-learning)
- ("r-paws-management" ,r-paws-management)
- ("r-paws-networking" ,r-paws-networking)
- ("r-paws-security-identity" ,r-paws-security-identity)
- ("r-paws-storage" ,r-paws-storage)))
+ (list r-paws-analytics
+ r-paws-application-integration
+ r-paws-compute
+ r-paws-cost-management
+ r-paws-customer-engagement
+ r-paws-database
+ r-paws-developer-tools
+ r-paws-end-user-computing
+ r-paws-machine-learning
+ r-paws-management
+ r-paws-networking
+ r-paws-security-identity
+ r-paws-storage))
(home-page "https://github.com/paws-r/paws")
(synopsis "Amazon Web Services software development kit")
(description
@@ -31808,16 +30883,16 @@ DynamoDB NoSQL database, and Lambda functions-as-a-service.")
`((upstream-name . "zoomGroupStats")))
(build-system r-build-system)
(propagated-inputs
- `(("r-data-table" ,r-data-table)
- ("r-dplyr" ,r-dplyr)
- ("r-lubridate" ,r-lubridate)
- ("r-magick" ,r-magick)
- ("r-openxlsx" ,r-openxlsx)
- ("r-paws" ,r-paws)
- ("r-pbapply" ,r-pbapply)
- ("r-stringr" ,r-stringr)
- ("r-syuzhet" ,r-syuzhet)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-data-table
+ r-dplyr
+ r-lubridate
+ r-magick
+ r-openxlsx
+ r-paws
+ r-pbapply
+ r-stringr
+ r-syuzhet))
+ (native-inputs (list r-knitr))
(home-page "http://zoomgroupstats.org")
(synopsis "Analyze text, audio, and video from Zoom meetings")
(description
@@ -31862,10 +30937,9 @@ zoom/navigate any plot when called with any active plot.")
(properties `((upstream-name . "zoolog")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rdpack" ,r-rdpack)
- ("r-stringi" ,r-stringi)))
+ (list r-rdpack r-stringi))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://josempozo.github.io/zoolog/")
(synopsis "Zooarchaeological analysis with log-ratios")
(description
@@ -31917,12 +30991,12 @@ large datasets.")
(properties `((upstream-name . "mlearning")))
(build-system r-build-system)
(propagated-inputs
- `(("r-class" ,r-class)
- ("r-e1071" ,r-e1071)
- ("r-ipred" ,r-ipred)
- ("r-mass" ,r-mass)
- ("r-nnet" ,r-nnet)
- ("r-randomforest" ,r-randomforest)))
+ (list r-class
+ r-e1071
+ r-ipred
+ r-mass
+ r-nnet
+ r-randomforest))
(home-page "http://www.sciviews.org/zooimage")
(synopsis "Machine learning algorithms with unified interface")
(description
@@ -31944,18 +31018,18 @@ algorithms. Confusion matrices are provided too.")
(properties `((upstream-name . "zooimage")))
(build-system r-build-system)
(propagated-inputs
- `(("r-digest" ,r-digest)
- ("r-dt" ,r-dt)
- ("r-filehash" ,r-filehash)
- ("r-jpeg" ,r-jpeg)
- ("r-mass" ,r-mass)
- ("r-mda" ,r-mda)
- ("r-mlearning" ,r-mlearning)
- ("r-png" ,r-png)
- ("r-shiny" ,r-shiny)
- ("r-svdialogs" ,r-svdialogs)
- ("r-svmisc" ,r-svmisc)
- ("r-tiff" ,r-tiff)))
+ (list r-digest
+ r-dt
+ r-filehash
+ r-jpeg
+ r-mass
+ r-mda
+ r-mlearning
+ r-png
+ r-shiny
+ r-svdialogs
+ r-svmisc
+ r-tiff))
(home-page "http://www.sciviews.org/zooimage")
(synopsis "Analysis of numerical plankton images")
(description
@@ -31979,8 +31053,8 @@ size spectra or biomasses, etc.).")
"0grc378xppv0303sf4flfqz5002vq5a23nzbq4bsff41rww7dihc"))))
(properties `((upstream-name . "zooaRch")))
(build-system r-build-system)
- (propagated-inputs `(("r-ggplot2" ,r-ggplot2)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (propagated-inputs (list r-ggplot2))
+ (native-inputs (list r-knitr))
(home-page
"https://cran.r-project.org/package=zooaRch")
(synopsis
@@ -32007,10 +31081,9 @@ and analyze zooarchaeological data.")
(properties `((upstream-name . "zonebuilder")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-sf" ,r-sf)))
+ (list r-rcolorbrewer r-sf))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/zonebuilders/zonebuilder")
(synopsis "Create and explore geographic zoning systems")
(description
@@ -32035,12 +31108,8 @@ concentric rings and radial lines emanating from a central point.")
(properties `((upstream-name . "zonator")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-raster" ,r-raster)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-reshape2" ,r-reshape2)
- ("r-rgdal" ,r-rgdal)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-ggplot2 r-raster r-rcolorbrewer r-reshape2 r-rgdal))
+ (native-inputs (list r-knitr))
(home-page "https://cbig.github.io/zonator/")
(synopsis "Utilities for Zonation spatial conservation prioritization")
(description
@@ -32085,13 +31154,13 @@ convert dates to MMWR day, week, and year and the reverse.")
(properties `((upstream-name . "crul")))
(build-system r-build-system)
(propagated-inputs
- `(("r-curl" ,r-curl)
- ("r-httpcode" ,r-httpcode)
- ("r-jsonlite" ,r-jsonlite)
- ("r-mime" ,r-mime)
- ("r-r6" ,r-r6)
- ("r-urltools" ,r-urltools)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-curl
+ r-httpcode
+ r-jsonlite
+ r-mime
+ r-r6
+ r-urltools))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/ropensci/crul")
(synopsis "HTTP client")
(description
@@ -32114,15 +31183,15 @@ inspiration from Ruby's @code{faraday} gem.")
(properties `((upstream-name . "gistr")))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertthat" ,r-assertthat)
- ("r-crul" ,r-crul)
- ("r-dplyr" ,r-dplyr)
- ("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-knitr" ,r-knitr)
- ("r-magrittr" ,r-magrittr)
- ("r-rmarkdown" ,r-rmarkdown)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-assertthat
+ r-crul
+ r-dplyr
+ r-httr
+ r-jsonlite
+ r-knitr
+ r-magrittr
+ r-rmarkdown))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/ropensci/gistr")
(synopsis "Work with Gists in browser")
(description
@@ -32168,16 +31237,16 @@ authenticated.")
(map car mapping)
(map cdr mapping)))))))))
(propagated-inputs
- `(("r-digest" ,r-digest)
- ("r-gistr" ,r-gistr)
- ("r-hexbin" ,r-hexbin)
- ("r-htmlwidgets" ,r-htmlwidgets)
- ("r-jsonlite" ,r-jsonlite)
- ("r-lazyeval" ,r-lazyeval)
- ("r-magrittr" ,r-magrittr)
- ("r-maps" ,r-maps)
- ("r-pryr" ,r-pryr)
- ("r-scales" ,r-scales)))
+ (list r-digest
+ r-gistr
+ r-hexbin
+ r-htmlwidgets
+ r-jsonlite
+ r-lazyeval
+ r-magrittr
+ r-maps
+ r-pryr
+ r-scales))
;; Version 0.12.15 is mentioned in lib/htmlwidgets/rbokeh.yaml.
(native-inputs
`(("esbuild" ,esbuild)
@@ -32218,11 +31287,9 @@ backed by the @url{https://bokeh.pydata.org/, Bokeh visualization library}.")
(properties `((upstream-name . "fauxpas")))
(build-system r-build-system)
(propagated-inputs
- `(("r-httpcode" ,r-httpcode)
- ("r-r6" ,r-r6)
- ("r-whisker" ,r-whisker)))
+ (list r-httpcode r-r6 r-whisker))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://docs.ropensci.org/fauxpas")
(synopsis "HTTP error helpers")
(description
@@ -32248,14 +31315,14 @@ configuration of status code, short description, and verbose message.")
(properties `((upstream-name . "webmockr")))
(build-system r-build-system)
(propagated-inputs
- `(("r-base64enc" ,r-base64enc)
- ("r-crul" ,r-crul)
- ("r-curl" ,r-curl)
- ("r-fauxpas" ,r-fauxpas)
- ("r-jsonlite" ,r-jsonlite)
- ("r-magrittr" ,r-magrittr)
- ("r-r6" ,r-r6)
- ("r-urltools" ,r-urltools)))
+ (list r-base64enc
+ r-crul
+ r-curl
+ r-fauxpas
+ r-jsonlite
+ r-magrittr
+ r-r6
+ r-urltools))
(home-page "https://github.com/ropensci/webmockr")
(synopsis "Stubbing and setting expectations on HTTP Requests")
(description
@@ -32280,9 +31347,9 @@ tests or outside of a testing context.")
(properties `((upstream-name . "mockery")))
(build-system r-build-system)
(propagated-inputs
- `(("r-testthat" ,r-testthat)))
+ (list r-testthat))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/jfiksel/mockery")
(synopsis "Mocking library for R")
(description
@@ -32308,17 +31375,17 @@ present in the @code{testthat} package.")
(properties `((upstream-name . "zoltr")))
(build-system r-build-system)
(propagated-inputs
- `(("r-base64url" ,r-base64url)
- ("r-dplyr" ,r-dplyr)
- ("r-httr" ,r-httr)
- ("r-jsonlite" ,r-jsonlite)
- ("r-magrittr" ,r-magrittr)
- ("r-mmwrweek" ,r-mmwrweek)
- ("r-mockery" ,r-mockery)
- ("r-readr" ,r-readr)
- ("r-rlang" ,r-rlang)
- ("r-webmockr" ,r-webmockr)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-base64url
+ r-dplyr
+ r-httr
+ r-jsonlite
+ r-magrittr
+ r-mmwrweek
+ r-mockery
+ r-readr
+ r-rlang
+ r-webmockr))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/reichlab/zoltr")
(synopsis "Interface to the Zoltar forecast repository API")
(description
@@ -32345,10 +31412,7 @@ deleting and uploading forecast data, and downloading scores.")
(properties `((upstream-name . "zoib")))
(build-system r-build-system)
(propagated-inputs
- `(("r-abind" ,r-abind)
- ("r-coda" ,r-coda)
- ("r-formula" ,r-formula)
- ("r-rjags" ,r-rjags)))
+ (list r-abind r-coda r-formula r-rjags))
(home-page "https://www.r-project.org")
(synopsis "Bayesian inference for beta regression")
(description
@@ -32369,7 +31433,7 @@ Monte Carlo approach implemented in JAGS.")
(base32 "08kym5i5fvbf5xhh9qdszp4jdgyc7j7zpnwzy68wabqz73aff6sg"))))
(properties `((upstream-name . "logger")))
(build-system r-build-system)
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (native-inputs (list r-knitr))
(home-page "https://daroczig.github.io/logger/")
(synopsis "Lightweight and flexible logging utility")
(description
@@ -32391,11 +31455,8 @@ formatting and delivering log messages with low overhead.")
(properties `((upstream-name . "fasterize")))
(build-system r-build-system)
(propagated-inputs
- `(("r-raster" ,r-raster)
- ("r-rcpp" ,r-rcpp)
- ("r-rcpparmadillo" ,r-rcpparmadillo)
- ("r-sp" ,r-sp)))
- (native-inputs `(("r-knitr" ,r-knitr)))
+ (list r-raster r-rcpp r-rcpparmadillo r-sp))
+ (native-inputs (list r-knitr))
(home-page "https://github.com/ecohealthalliance/fasterize")
(synopsis "Fast Polygon to Raster Conversion")
(description
@@ -32419,20 +31480,19 @@ options for aggregating multi-layer rasters.")
(properties `((upstream-name . "BIEN")))
(build-system r-build-system)
(native-inputs
- `(("r-knitr" ,r-knitr)
- ("r-testthat" ,r-testthat)))
- (propagated-inputs
- `(("r-ape" ,r-ape)
- ("r-dbi" ,r-dbi)
- ("r-doparallel" ,r-doparallel)
- ("r-fasterize" ,r-fasterize)
- ("r-foreach" ,r-foreach)
- ("r-raster" ,r-raster)
- ("r-rgdal" ,r-rgdal)
- ("r-rgeos" ,r-rgeos)
- ("r-rpostgresql" ,r-rpostgresql)
- ("r-sf" ,r-sf)
- ("r-sp" ,r-sp)))
+ (list r-knitr r-testthat))
+ (propagated-inputs
+ (list r-ape
+ r-dbi
+ r-doparallel
+ r-fasterize
+ r-foreach
+ r-raster
+ r-rgdal
+ r-rgeos
+ r-rpostgresql
+ r-sf
+ r-sp))
(home-page "https://cran.r-project.org/package=BIEN")
(synopsis "Tools for accessing the BIEN database")
(description
@@ -32457,13 +31517,9 @@ constructing and executing optimized SQL queries.")
(properties `((upstream-name . "ggh4x")))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-gtable" ,r-gtable)
- ("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)
- ("r-vctrs" ,r-vctrs)))
+ (list r-ggplot2 r-gtable r-rlang r-scales r-vctrs))
(native-inputs
- `(("r-knitr" ,r-knitr)))
+ (list r-knitr))
(home-page "https://github.com/teunbrand/ggh4x")
(synopsis "Extension for ggplot2")
(description "This package is a @code{ggplot2} extension. It provides some
generated by cgit v1.2.3 (git 2.45.2) at 2024-07-02 05:51:18 +0000