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-rw-r--r--gnu/packages/bioinformatics.scm11
1 files changed, 2 insertions, 9 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 9811a0b9e2..1ffac1a0ca 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10441,7 +10441,7 @@ once. This package provides tools to perform Drop-seq analyses.")
(define-public pigx-rnaseq
(package
(name "pigx-rnaseq")
- (version "0.0.21")
+ (version "0.1.0")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/BIMSBbioinfo/pigx_rnaseq/"
@@ -10449,19 +10449,12 @@ once. This package provides tools to perform Drop-seq analyses.")
"/pigx_rnaseq-" version ".tar.gz"))
(sha256
(base32
- "0367jn73vja94ch9fwgaiwy62rbxfzc85xz6blzbkjyzhph1r173"))))
+ "0acdjimfb9ywba8zsv7lavv436pmcmp8ra683h11wr4s3681pqk8"))))
(build-system gnu-build-system)
(arguments
`(#:parallel-tests? #f ; not supported
#:phases
(modify-phases %standard-phases
- ;; knitr 0.39 changes the default behavior of how graphics are
- ;; included.
- (add-after 'unpack 'patch-knitr
- (lambda _
- (substitute* "scripts/runDeseqReport.R"
- (("outFile <- paste0" m)
- (string-append "options(knitr.graphics.rel_path = FALSE)\n" m)))))
;; "test.sh" runs the whole pipeline, which takes a long time and
;; might fail due to OOM. The MultiQC is also resource intensive.
(add-after 'unpack 'disable-resource-intensive-test