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Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 24 |
1 files changed, 24 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index a1f7b2d2a8..92f2e4f3ab 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -4745,3 +4745,27 @@ enhancers. The annotatr package provides an easy way to summarize and visualize the intersection of genomic sites/regions with genomic annotations.") (license license:gpl3))) + +(define-public r-rsubread + (package + (name "r-rsubread") + (version "1.34.2") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "Rsubread" version)) + (sha256 + (base32 + "0bsrw61wcav0q22c5m6gr0vn1f3c3ld8gxj730wcab6dj196z6q3")))) + (properties `((upstream-name . "Rsubread"))) + (build-system r-build-system) + (inputs `(("zlib" ,zlib))) + (home-page "https://bioconductor.org/packages/Rsubread/") + (synopsis "Subread sequence alignment and counting for R") + (description + "This package provides tools for alignment, quantification and analysis +of second and third generation sequencing data. It includes functionality for +read mapping, read counting, SNP calling, structural variant detection and +gene fusion discovery. It can be applied to all major sequencing techologies +and to both short and long sequence reads.") + (license license:gpl3))) |