summaryrefslogtreecommitdiff
path: root/gnu/packages/bioconductor.scm
diff options
context:
space:
mode:
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm52
1 files changed, 26 insertions, 26 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index aba7f107dc..bdedeabede 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -843,32 +843,6 @@ performing parallel computations on multicore machines.")
Disease Ontology.")
(license license:artistic2.0)))
-(define-public r-pasilla
- (package
- (name "r-pasilla")
- (version "1.14.0")
- (source (origin
- (method url-fetch)
- (uri (string-append
- "http://bioconductor.org/packages/release/data/experiment"
- "/src/contrib/pasilla_" version ".tar.gz"))
- (sha256
- (base32
- "0h124i2fb2lbj2k48zzf1n7ldqa471bs26fbd9vw50299aqx28x0"))))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-biocstyle" ,r-biocstyle)
- ("r-dexseq" ,r-dexseq)
- ("r-knitr" ,r-knitr)
- ("r-rmarkdown" ,r-rmarkdown)))
- (home-page "https://www.bioconductor.org/packages/pasilla/")
- (synopsis "Data package with per-exon and per-gene read counts")
- (description "This package provides per-exon and per-gene read counts
-computed for selected genes from RNA-seq data that were presented in the
-article 'Conservation of an RNA regulatory map between Drosophila and mammals'
-by Brooks et al., Genome Research 2011.")
- (license license:lgpl2.1+)))
-
(define-public r-pfam-db
(package
(name "r-pfam-db")
@@ -1001,6 +975,32 @@ from Illumina 450k methylation arrays.")
genomes and gene ID formats, largely based on the UCSC table browser.")
(license license:lgpl2.0+)))
+(define-public r-pasilla
+ (package
+ (name "r-pasilla")
+ (version "1.14.0")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append
+ "http://bioconductor.org/packages/release/data/experiment"
+ "/src/contrib/pasilla_" version ".tar.gz"))
+ (sha256
+ (base32
+ "0h124i2fb2lbj2k48zzf1n7ldqa471bs26fbd9vw50299aqx28x0"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-biocstyle" ,r-biocstyle)
+ ("r-dexseq" ,r-dexseq)
+ ("r-knitr" ,r-knitr)
+ ("r-rmarkdown" ,r-rmarkdown)))
+ (home-page "https://www.bioconductor.org/packages/pasilla/")
+ (synopsis "Data package with per-exon and per-gene read counts")
+ (description "This package provides per-exon and per-gene read counts
+computed for selected genes from RNA-seq data that were presented in the
+article 'Conservation of an RNA regulatory map between Drosophila and mammals'
+by Brooks et al., Genome Research 2011.")
+ (license license:lgpl2.1+)))
+
(define-public r-hsmmsinglecell
(package
(name "r-hsmmsinglecell")