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-rw-r--r--gnu/packages/bioconductor.scm64
1 files changed, 32 insertions, 32 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 17d15c06c5..e4b01170e3 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1510,14 +1510,14 @@ used visualizations.")
"07vr27rv3z86ajd62c0ilvfgz9z35qsiwwi5pv4sygbhnnjwh3rc"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-kernsmooth" ,r-kernsmooth)
- ("r-matrixstats" ,r-matrixstats)
- ("r-patchwork" ,r-patchwork)
- ("r-pbapply" ,r-pbapply)
- ("r-statmod" ,r-statmod)
- ("r-survey" ,r-survey)
- ("r-viridislite" ,r-kernsmooth)))
+ (list r-ggplot2
+ r-kernsmooth
+ r-matrixstats
+ r-patchwork
+ r-pbapply
+ r-statmod
+ r-survey
+ r-kernsmooth))
(home-page "https://github.com/borishejblum/dearseq")
(synopsis "DEA for RNA-seq data through a robust variance component test")
(description
@@ -3578,30 +3578,30 @@ throughput genetic sequencing data sets using regression methods.")
(native-inputs
(list r-knitr))
(propagated-inputs
- `(("r-biocgenerics" ,r-biocgenerics)
- ("r-biostrings" ,r-biostrings)
- ("r-bsgenome" ,r-bsgenome)
- ;; These two packages are suggested packages
- ("r-bsgenome-hsapiens-1000g" ,r-bsgenome-hsapiens-1000genomes-hs37d5)
- ("r-bsgenome-hsapiens-ucsc-hg19" ,r-bsgenome-hsapiens-ucsc-hg19)
- ("r-cowplot" ,r-cowplot)
- ("r-dplyr" ,r-dplyr)
- ("r-genomeinfodb" ,r-genomeinfodb)
- ("r-genomicranges" ,r-genomicranges)
- ("r-ggalluvial" ,r-ggalluvial)
- ("r-ggdendro" ,r-ggdendro)
- ("r-ggplot2" ,r-ggplot2)
- ("r-iranges" ,r-iranges)
- ("r-magrittr" ,r-magrittr)
- ("r-nmf" ,r-nmf)
- ("r-pracma" ,r-pracma)
- ("r-purrr" ,r-purrr)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-s4vectors" ,r-s4vectors)
- ("r-stringr" ,r-stringr)
- ("r-tibble" ,r-tibble)
- ("r-tidyr" ,r-tidyr)
- ("r-variantannotation" ,r-variantannotation)))
+ (list r-biocgenerics
+ r-biostrings
+ r-bsgenome
+ ;; These two packages are suggested packages
+ r-bsgenome-hsapiens-1000genomes-hs37d5
+ r-bsgenome-hsapiens-ucsc-hg19
+ r-cowplot
+ r-dplyr
+ r-genomeinfodb
+ r-genomicranges
+ r-ggalluvial
+ r-ggdendro
+ r-ggplot2
+ r-iranges
+ r-magrittr
+ r-nmf
+ r-pracma
+ r-purrr
+ r-rcolorbrewer
+ r-s4vectors
+ r-stringr
+ r-tibble
+ r-tidyr
+ r-variantannotation))
(home-page "https://bioconductor.org/packages/MutationalPatterns/")
(synopsis "Extract and visualize mutational patterns in genomic data")
(description "This package provides an extensive toolset for the