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| -rw-r--r-- | gnu/packages/bioconductor.scm | 30 |
1 files changed, 30 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index a08ad46110..0e26033d44 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1868,3 +1868,33 @@ to install interface to SYMPHONY.") ;; Symphony 5.4 or later is distributed under the terms of the EPL 1.0. ;; lpsimphony is released under the same terms. (license license:epl1.0))) + +(define-public r-ihw + (package + (name "r-ihw") + (version "1.10.1") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "IHW" version)) + (sha256 + (base32 + "10wqasl8k2j3y5qvak3xr2xj6symk656xww1y5n2l22nz832j19n")))) + (properties `((upstream-name . "IHW"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocgenerics" ,r-biocgenerics) + ("r-fdrtool" ,r-fdrtool) + ("r-lpsymphony" ,r-lpsymphony) + ("r-slam" ,r-slam))) + (home-page "https://bioconductor.org/packages/IHW") + (synopsis "Independent hypothesis weighting") + (description + "@dfn{Independent hypothesis weighting} (IHW) is a multiple testing +procedure that increases power compared to the method of Benjamini and +Hochberg by assigning data-driven weights to each hypothesis. The input to +IHW is a two-column table of p-values and covariates. The covariate can be +any continuous-valued or categorical variable that is thought to be +informative on the statistical properties of each hypothesis test, while it is +independent of the p-value under the null hypothesis.") + (license license:artistic2.0))) |