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-rw-r--r--gnu/packages/bioinformatics.scm8
-rw-r--r--gnu/packages/patches/freebayes-devendor-deps.patch2
2 files changed, 5 insertions, 5 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 5b14e765de..39611d23f4 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -15209,18 +15209,18 @@ library automatically handles index file generation and use.")
(let* ((out (assoc-ref outputs "out"))
(pkgconfig (string-append out "/lib/pkgconfig")))
(mkdir-p pkgconfig)
- (with-output-to-file (string-append pkgconfig "/libvcflib.pc")
+ (with-output-to-file (string-append pkgconfig "/vcflib.pc")
(lambda _
(format #t "prefix=~a~@
exec_prefix=${prefix}~@
libdir=${exec_prefix}/lib~@
includedir=${prefix}/include~@
~@
- Name: libvcflib~@
+ Name: vcflib~@
Version: ~a~@
- Requires: smithwaterman, fastahack~@
+ Requires: smithwaterman, fastahack, tabixpp~@
Description: C++ library for parsing and manipulating VCF files~@
- Libs: -L${libdir} -llibvcflib~@
+ Libs: -L${libdir} -lvcflib~@
Cflags: -I${includedir}~%"
out ,version)))
#t))))))
diff --git a/gnu/packages/patches/freebayes-devendor-deps.patch b/gnu/packages/patches/freebayes-devendor-deps.patch
index 7e84666b85..9886de11fb 100644
--- a/gnu/packages/patches/freebayes-devendor-deps.patch
+++ b/gnu/packages/patches/freebayes-devendor-deps.patch
@@ -23,7 +23,7 @@ index f6bf242..bded4af 100644
+tabixpp_dep = dependency('tabixpp', required : false)
+fastahack_dep = dependency('fastahack', required : false)
+smithwaterman_dep = dependency('smithwaterman', required : false)
-+vcflib_dep = dependency('libvcflib', required: false)
++vcflib_dep = dependency('vcflib', required: false)
thread_dep = dependency('threads')
if htslib_dep.found()