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authorRicardo Wurmus <rekado@elephly.net>2021-12-04 00:21:27 +0100
committerRicardo Wurmus <rekado@elephly.net>2021-12-04 00:21:27 +0100
commit630671d2e8c5f24bd14b7ea581108f76a54b2865 (patch)
tree804022d84e42fcca04e94956307ffa8f0c6f5c87 /gnu
parent5cb2920b8dc61648eb8e61dadd2ee0b38ee93915 (diff)
downloadguix-patches-630671d2e8c5f24bd14b7ea581108f76a54b2865.tar
guix-patches-630671d2e8c5f24bd14b7ea581108f76a54b2865.tar.gz
gnu: mafft: Replace references to %build-inputs and %outputs.
* gnu/packages/bioinformatics.scm (mafft)[arguments]: Replace references to %outputs with a gexp; replace reference to %build-inputs in the 'wrap-programs phase by binding INPUTS.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioinformatics.scm11
1 files changed, 5 insertions, 6 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 9d8a33df3f..0c75169d45 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -5221,10 +5221,9 @@ sequencing tag position and orientation.")
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; no automated tests, though there are tests in the read me
- #:make-flags (let ((out (assoc-ref %outputs "out")))
- (list (string-append "PREFIX=" out)
- (string-append "BINDIR="
- (string-append out "/bin"))))
+ #:make-flags ,#~(list (string-append "PREFIX=" #$output)
+ (string-append "BINDIR="
+ (string-append #$output "/bin")))
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'enter-dir
@@ -5264,11 +5263,11 @@ sequencing tag position and orientation.")
#t))
(delete 'configure)
(add-after 'install 'wrap-programs
- (lambda* (#:key outputs #:allow-other-keys)
+ (lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(bin (string-append out "/bin"))
(path (string-append
- (assoc-ref %build-inputs "coreutils") "/bin:")))
+ (assoc-ref inputs "coreutils") "/bin:")))
(for-each (lambda (file)
(wrap-program file
`("PATH" ":" prefix (,path))))