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| author | hli <hli@mdc-berlin.de> | 2021-03-30 00:53:51 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-04-12 18:25:40 +0200 |
| commit | eb8da54170919bc31946f492da1071dd491e942a (patch) | |
| tree | 727baecf49a8764547202b90983a3b4c8b5754b3 /gnu | |
| parent | a247f5c7537df7e0c09051ba22d5c95eb08f48b9 (diff) | |
| download | guix-patches-eb8da54170919bc31946f492da1071dd491e942a.tar guix-patches-eb8da54170919bc31946f492da1071dd491e942a.tar.gz | |
gnu: Add r-txdb-dmelanogaster-ucsc-dm6-ensgene.
* gnu/packages/bioconductor.scm (r-txdb-dmelanogaster-ucsc-dm6-ensgene):
New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 6b5c0a0391..171736064c 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -619,6 +619,32 @@ as provided by UCSC (hg38, Dec. 2013) and stored in Biostrings objects.") "This package exposes an annotation database generated from Ensembl.") (license license:artistic2.0))) +(define-public r-txdb-dmelanogaster-ucsc-dm6-ensgene + (package + (name "r-txdb-dmelanogaster-ucsc-dm6-ensgene") + (version "3.12.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "TxDb.Dmelanogaster.UCSC.dm6.ensGene" + version 'annotation)) + (sha256 + (base32 + "0yij7zyqkmmr13389rs2gfa5anvvw648nnl1kjbsgvyxkggif8q4")))) + (properties + `((upstream-name . "TxDb.Dmelanogaster.UCSC.dm6.ensGene"))) + (build-system r-build-system) + (propagated-inputs + `(("r-annotationdbi" ,r-annotationdbi) + ("r-genomicfeatures" ,r-genomicfeatures))) + (home-page + "https://bioconductor.org/packages/TxDb.Dmelanogaster.UCSC.dm6.ensGene") + (synopsis "Annotation package for TxDb object(s)") + (description + "This package exposes an annotation databases generated from UCSC by +exposing these as TxDb objects.") + (license license:artistic2.0))) + (define-public r-txdb-hsapiens-ucsc-hg19-knowngene (package (name "r-txdb-hsapiens-ucsc-hg19-knowngene") |