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| author | Ricardo Wurmus <rekado@elephly.net> | 2021-12-02 11:57:28 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-12-02 11:57:28 +0100 |
| commit | a8fff63daa9a4dababac30826423d72e01a7b6c0 (patch) | |
| tree | a45d0e416042f576d1caac69940a4f76543f5206 /gnu | |
| parent | b15a5257036251c92d3ed251ef654e16a7d6b553 (diff) | |
| download | guix-patches-a8fff63daa9a4dababac30826423d72e01a7b6c0.tar guix-patches-a8fff63daa9a4dababac30826423d72e01a7b6c0.tar.gz | |
gnu: Add python-mygene.
* gnu/packages/bioinformatics.scm (python-mygene): New variable.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 21 |
1 files changed, 21 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 9cb2f1ed5d..c4da571f95 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -10340,6 +10340,27 @@ single-cell RNA-seq data.") API services.") (license license:bsd-3))) +(define-public python-mygene + (package + (name "python-mygene") + (version "3.2.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "mygene" version)) + (sha256 + (base32 "1snszwdgfygchxshcbry3b5pbcw3g1isp8dw46razxccqaxwlag7")))) + (build-system python-build-system) + (propagated-inputs + `(("python-biothings-client" ,python-biothings-client))) + (home-page "https://github.com/biothings/mygene.py") + (synopsis "Python Client for MyGene.Info services.") + (description "MyGene.Info provides simple-to-use REST web services +to query/retrieve gene annotation data. It's designed with simplicity +and performance emphasized. Mygene is a Python wrapper to access +MyGene.Info services.") + (license license:bsd-3))) + ;; We cannot use the latest commit because it requires Java 9. (define-public java-forester (let ((commit "86b07efe302d5094b42deed9260f719a4c4ac2e6") |