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| author | Roel Janssen <roel@gnu.org> | 2021-05-26 09:29:01 +0200 |
|---|---|---|
| committer | Roel Janssen <roel@gnu.org> | 2021-05-26 09:29:01 +0200 |
| commit | b1fee8a00318f4cf2cb3f854edc70f5c000ab71f (patch) | |
| tree | 500947e3b1eecdad9b9711d02ac9b24a4d532313 /gnu | |
| parent | b84ead8c045f7921131dc66ab85ee1db3113607a (diff) | |
| download | guix-patches-b1fee8a00318f4cf2cb3f854edc70f5c000ab71f.tar guix-patches-b1fee8a00318f4cf2cb3f854edc70f5c000ab71f.tar.gz | |
gnu: Add r-spp.
* gnu/packages/bioinformatics.scm (r-spp): New variable.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 24 |
1 files changed, 24 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 9c77d66a35..bcc9f5bef2 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -8108,6 +8108,30 @@ sequence motif occurrences across a large set of sequences centred at a common reference point and sorted by a user defined feature.") (license license:gpl3+))) +(define-public r-spp + (package + (name "r-spp") + (version "1.16.0") + (source (origin + (method url-fetch) + (uri (cran-uri "spp" version)) + (sha256 + (base32 + "08zxxgyp0h6733b08jmml7k4rhfd3mi5dda3jrzid0s184y0z29w")))) + (build-system r-build-system) + (inputs + `(("zlib" ,zlib))) + (propagated-inputs + `(("r-bh" ,r-bh) + ("r-catools" ,r-catools) + ("r-rcpp" ,r-rcpp) + ("r-rsamtools" ,r-rsamtools))) + (home-page "https://cran.r-project.org/web/packages/spp/") + (synopsis "ChIP-Seq processing pipeline") + (description "This package provides tools for analysis of ChIP-seq and +other functional sequencing data.") + (license license:gpl2))) + (define-public r-genomation (package (name "r-genomation") |