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| author | Ricardo Wurmus <rekado@elephly.net> | 2021-12-05 19:17:41 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-12-05 19:17:41 +0100 |
| commit | 9bc0f45df5d6aed217020b1183dca54989844fb0 (patch) | |
| tree | d927e89949ff7f65b5059bc94273c53fd43d0763 /gnu | |
| parent | 6db3c536e89deb8a204e756f427614925a7d2582 (diff) | |
| parent | 10554e0a57feeea470127a1d0441957d1776b0bd (diff) | |
| download | guix-patches-9bc0f45df5d6aed217020b1183dca54989844fb0.tar guix-patches-9bc0f45df5d6aed217020b1183dca54989844fb0.tar.gz | |
Merge remote-tracking branch 'origin/master' into core-updates-frozen
Diffstat (limited to 'gnu')
139 files changed, 6230 insertions, 2711 deletions
diff --git a/gnu/bootloader/grub.scm b/gnu/bootloader/grub.scm index d8e888ff40..42f71aa4db 100644 --- a/gnu/bootloader/grub.scm +++ b/gnu/bootloader/grub.scm @@ -415,8 +415,7 @@ menuentry ~s { ;; Other type of devices aren't implemented. #~())) (let ((devices (map crypto-device->cryptomount store-crypto-devices)) - ;; XXX: Add luks2 when grub 2.06 is packaged. - (modules #~(format port "insmod luks~%"))) + (modules #~(format port "insmod luks~%insmod luks2~%"))) (if (null? devices) devices (cons modules devices)))) diff --git a/gnu/home/services/shells.scm b/gnu/home/services/shells.scm index 80f13a31b7..ca7f4ac0ad 100644 --- a/gnu/home/services/shells.scm +++ b/gnu/home/services/shells.scm @@ -390,7 +390,9 @@ then fi # Source the system-wide file. -source /etc/bashrc +if [[ -e /etc/bashrc ]]; then + source /etc/bashrc +fi # Adjust the prompt depending on whether we're in 'guix environment'. if [ -n \"$GUIX_ENVIRONMENT\" ] diff --git a/gnu/installer/parted.scm b/gnu/installer/parted.scm index fadac36208..cf121e79a6 100644 --- a/gnu/installer/parted.scm +++ b/gnu/installer/parted.scm @@ -26,6 +26,7 @@ #:use-module ((gnu build file-systems) #:select (canonicalize-device-spec find-partition-by-label + find-partition-by-uuid read-partition-uuid read-luks-partition-uuid)) #:use-module ((gnu build linux-boot) @@ -345,35 +346,38 @@ fail. See rereadpt function in wipefs.c of util-linux for an explanation." (with-null-output-ports (invoke "dmsetup" "remove_all"))) -(define (installation-device) - "Return the installation device path." +(define (installer-root-partition-path) + "Return the root partition path, or #f if it could not be detected." (let* ((cmdline (linux-command-line)) (root (find-long-option "--root" cmdline))) (and root - (canonicalize-device-spec (uuid root))))) + (or (and (access? root F_OK) root) + (find-partition-by-label root) + (and=> (uuid root) + find-partition-by-uuid))))) (define (non-install-devices) "Return all the available devices, except the install device." - (define (read-only? device) - (dynamic-wind - (lambda () - (device-open device)) - (lambda () - (device-read-only? device)) - (lambda () - (device-close device)))) - - ;; If parted reports that a device is read-only it is probably the - ;; installation device. However, as this detection does not always work, - ;; compare the device path to the installation device path read from the - ;; command line. - (let ((install-device (installation-device))) - (remove (lambda (device) - (let ((file-name (device-path device))) - (or (read-only? device) - (and install-device - (string=? file-name install-device))))) - (devices)))) + + (define the-installer-root-partition-path + (installer-root-partition-path)) + + ;; Read partition table of device and compare each path to the one + ;; we're booting from to determine if it is the installation + ;; device. + (define (installation-device? device) + ;; When using CDROM based installation, the root partition path may be the + ;; device path. + (or (string=? the-installer-root-partition-path + (device-path device)) + (let ((disk (disk-new device))) + (and disk + (any (lambda (partition) + (string=? the-installer-root-partition-path + (partition-get-path partition))) + (disk-partitions disk)))))) + + (remove installation-device? (devices))) ;; @@ -1165,8 +1169,9 @@ USER-PARTITION if it is encrypted, or the plain file-name otherwise." (lambda (key-file) (syslog "formatting and opening LUKS entry ~s at ~s~%" label file-name) - (system* "cryptsetup" "-q" "luksFormat" file-name key-file) - (system* "cryptsetup" "open" "--type" "luks" + (system* "cryptsetup" "-q" "luksFormat" "--type" "luks2" + "--pbkdf" "pbkdf2" file-name key-file) + (system* "cryptsetup" "open" "--key-file" key-file file-name label))))) (define (luks-close user-partition) diff --git a/gnu/local.mk b/gnu/local.mk index a2a8c4a9e5..50ca9b6178 100644 --- a/gnu/local.mk +++ b/gnu/local.mk @@ -961,6 +961,7 @@ dist_patch_DATA = \ %D%/packages/patches/combinatorial-blas-awpm.patch \ %D%/packages/patches/combinatorial-blas-io-fix.patch \ %D%/packages/patches/coreutils-gnulib-tests.patch \ + %D%/packages/patches/coq-fix-envvars.patch \ %D%/packages/patches/coreutils-ls.patch \ %D%/packages/patches/cpuinfo-system-libraries.patch \ %D%/packages/patches/crawl-upgrade-saves.patch \ @@ -1000,6 +1001,7 @@ dist_patch_DATA = \ %D%/packages/patches/dstat-skip-devices-without-io.patch \ %D%/packages/patches/dune-istl-2.7-fix-non-mpi-tests.patch \ %D%/packages/patches/dvd+rw-tools-add-include.patch \ + %D%/packages/patches/dynaconf-unvendor-deps.patch \ %D%/packages/patches/ecl-16-format-directive-limit.patch \ %D%/packages/patches/ecl-16-ignore-stderr-write-error.patch \ %D%/packages/patches/ecl-16-libffi.patch \ @@ -1248,9 +1250,9 @@ dist_patch_DATA = \ %D%/packages/patches/hurd-cross.patch \ %D%/packages/patches/hurd-xattr.patch \ %D%/packages/patches/hydra-disable-darcs-test.patch \ - %D%/packages/patches/icecat-78-makeicecat.patch \ %D%/packages/patches/icecat-makeicecat.patch \ %D%/packages/patches/icecat-avoid-bundled-libraries.patch \ + %D%/packages/patches/icecat-CVE-2021-43527.patch \ %D%/packages/patches/icecat-use-older-reveal-hidden-html.patch \ %D%/packages/patches/icecat-use-system-graphite2+harfbuzz.patch \ %D%/packages/patches/icecat-use-system-media-libs.patch \ @@ -1509,6 +1511,7 @@ dist_patch_DATA = \ %D%/packages/patches/nsis-env-passthru.patch \ %D%/packages/patches/nsis-source-date-epoch.patch \ %D%/packages/patches/nss-getcwd-nonnull.patch \ + %D%/packages/patches/nss-CVE-2021-43527.patch \ %D%/packages/patches/nss-increase-test-timeout.patch \ %D%/packages/patches/nss-3.56-pkgconfig.patch \ %D%/packages/patches/nvi-assume-preserve-path.patch \ @@ -1724,7 +1727,6 @@ dist_patch_DATA = \ %D%/packages/patches/ripperx-missing-file.patch \ %D%/packages/patches/rpcbind-CVE-2017-8779.patch \ %D%/packages/patches/rtags-separate-rct.patch \ - %D%/packages/patches/racket-minimal-backport-1629887.patch \ %D%/packages/patches/racket-minimal-sh-via-rktio.patch \ %D%/packages/patches/remake-impure-dirs.patch \ %D%/packages/patches/restic-0.9.6-fix-tests-for-go1.15.patch \ @@ -1828,6 +1830,7 @@ dist_patch_DATA = \ %D%/packages/patches/u-boot-rockchip-inno-usb.patch \ %D%/packages/patches/u-boot-sifive-prevent-reloc-initrd-fdt.patch \ %D%/packages/patches/u-boot-riscv64-fix-extlinux.patch \ + %D%/packages/patches/u-boot-rk3399-enable-emmc-phy.patch \ %D%/packages/patches/ucx-tcp-iface-ioctl.patch \ %D%/packages/patches/ungoogled-chromium-extension-search-path.patch \ %D%/packages/patches/ungoogled-chromium-ffmpeg-compat.patch \ diff --git a/gnu/packages/admin.scm b/gnu/packages/admin.scm index 5d8b5cdc29..1d934f0d89 100644 --- a/gnu/packages/admin.scm +++ b/gnu/packages/admin.scm @@ -1021,7 +1021,7 @@ would need and has several interesting built-in capabilities.") (define-public netcat-openbsd (package (name "netcat-openbsd") - (version "1.217-2") + (version "1.218-2") (source (origin (method git-fetch) (uri (git-reference @@ -1030,7 +1030,7 @@ would need and has several interesting built-in capabilities.") (file-name (git-file-name name version)) (sha256 (base32 - "19sr52ix14w344pv13ppb0c1wyg5dxhic1fw2q0s3qfmx57b9hhp")))) + "1rj4nx0jdism1idc4fghahqbafhv72cpk7zlyq9czgvbps10d1kh")))) (build-system gnu-build-system) (arguments `(#:tests? #f ; no test suite @@ -1042,8 +1042,7 @@ would need and has several interesting built-in capabilities.") (add-before 'build 'patch (lambda _ (setenv "QUILT_PATCHES" "debian/patches") - (invoke "quilt" "push" "-a") - #t)) + (invoke "quilt" "push" "-a"))) (replace 'install (lambda* (#:key outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out")) @@ -1054,8 +1053,7 @@ would need and has several interesting built-in capabilities.") (install-file "nc" bin) (install-file "nc.1" man) (install-file "debian/copyright" doc) - (copy-recursively "debian/examples" examples) - #t)))))) + (copy-recursively "debian/examples" examples))))))) (inputs `(("libbsd" ,libbsd))) (native-inputs `(("pkg-config" ,pkg-config) ("quilt" ,quilt))) @@ -2193,13 +2191,13 @@ development, not the kernel implementation of ACPI.") (define-public s-tui (package (name "s-tui") - (version "1.1.1") + (version "1.1.3") (source (origin (method url-fetch) (uri (pypi-uri "s-tui" version)) (sha256 - (base32 "1clk59wf6v1lq33h4x5qwxvz5ng9mfkp1s6ynxa58w2raq8dbmy5")))) + (base32 "1l2ik5iwmb8vxa2aqdy62zfy3zfzbpq5a0pgpka2vvlw9ivpqy5p")))) (build-system python-build-system) (inputs `(("python-psutil" ,python-psutil) @@ -3179,7 +3177,7 @@ throughput (in the same interval).") (define-public thefuck (package (name "thefuck") - (version "3.30") + (version "3.31") (source (origin (method git-fetch) @@ -3188,7 +3186,7 @@ throughput (in the same interval).") (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "0fnf78956pwhb9cgv1jmgypnkma5xzflkivfrkfiadbgin848yfg")) + (base32 "05h60gxky57nalc2hdkpg8wqyg16432x9gcb9wnwblplk98998kq")) (patches (search-patches "thefuck-test-environ.patch")))) (build-system python-build-system) (arguments @@ -3201,8 +3199,10 @@ throughput (in the same interval).") (add-installed-pythonpath inputs outputs) ;; Some tests need write access to $HOME. (setenv "HOME" "/tmp") - (invoke "py.test" "-v") - #t))))) + ;; Even with that, this function tries to mkdir /.config. + (substitute* "tests/test_utils.py" + (("settings\\.init\\(\\)") "")) + (invoke "py.test" "-v")))))) (propagated-inputs `(("python-colorama" ,python-colorama) ("python-decorator" ,python-decorator) @@ -3984,7 +3984,7 @@ Python loading in HPC environments.") (let ((real-name "inxi")) (package (name "inxi-minimal") - (version "3.3.08-1") + (version "3.3.09-1") (source (origin (method git-fetch) @@ -3993,7 +3993,7 @@ Python loading in HPC environments.") (commit version))) (file-name (git-file-name real-name version)) (sha256 - (base32 "0kgxyxfw4hkmp9s3nazdqqvbfb4jqwv59mnpaa7g4n63nrqjv06v")))) + (base32 "0m8acg7avnmwqnz59kvrj8rrzg68m228x366bdr3qphw4jqp9l62")))) (build-system trivial-build-system) (inputs `(("bash" ,bash-minimal) @@ -4045,8 +4045,7 @@ Python loading in HPC environments.") %build-inputs))))) (invoke "gzip" "inxi.1") (install-file "inxi.1.gz" - (string-append %output "/share/man/man1"))) - #t))) + (string-append %output "/share/man/man1")))))) (home-page "https://smxi.org/docs/inxi.htm") (synopsis "Full-featured system information script") (description "Inxi is a system information script that can display @@ -4194,7 +4193,7 @@ cache of unix and unix-like systems.") (define-public solaar (package (name "solaar") - (version "1.0.6") + (version "1.0.7") (source (origin (method git-fetch) (uri (git-reference @@ -4203,7 +4202,7 @@ cache of unix and unix-like systems.") (file-name (git-file-name name version)) (sha256 (base32 - "04zclzfc31l2fj5shcsngnmcvcmmhnc567l3wb9yfhs8k39k9kb2")))) + "0k7mjdfvf28fay50b2hs2z4qk6s23h71wvl8777idlrz5i5f43j5")))) (build-system python-build-system) (arguments `(#:phases diff --git a/gnu/packages/assembly.scm b/gnu/packages/assembly.scm index e5cdce0bd4..675663047e 100644 --- a/gnu/packages/assembly.scm +++ b/gnu/packages/assembly.scm @@ -387,14 +387,14 @@ Supported architectures are: (define-public xa (package (name "xa") - (version "2.3.11") + (version "2.3.12") (source (origin (method url-fetch) (uri (string-append "https://www.floodgap.com/retrotech/xa" "/dists/xa-" version ".tar.gz")) (sha256 (base32 - "0b81r7mvzqxgnbbmhixcnrf9nc72v1nqaw19k67221g3k561dwij")))) + "0107zdwc2rzlp26pyx7gns4lqmiyg68nmpgwrg36yrrd04v1bzgq")))) (build-system gnu-build-system) (arguments `(#:tests? #f ; TODO: custom test harness, not sure how it works diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 53bac8e5c4..0f0390054b 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -33,6 +33,7 @@ #:use-module (gnu packages) #:use-module (gnu packages algebra) #:use-module (gnu packages autotools) + #:use-module (gnu packages boost) #:use-module (gnu packages check) #:use-module (gnu packages compression) #:use-module (gnu packages curl) @@ -57,6 +58,7 @@ #:use-module (gnu packages qt) #:use-module (gnu packages version-control) #:use-module (gnu packages video) + #:use-module (gnu packages wxwidgets) #:use-module (gnu packages xiph) #:use-module (gnu packages xml) #:use-module (gnu packages xorg) @@ -988,10 +990,61 @@ provide you with detailed information about each pass.") It can be used to calculate the trajectory of satellites.") (license license:asl2.0)))) +(define-public imppg + (package + (name "imppg") + (version "0.6.4") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/GreatAttractor/imppg") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "04synbmyz0hkipl1cdc26nr42r57v494yjw8pi4jx0jrxrawgj9h")))) + (build-system cmake-build-system) + (arguments + `(#:tests? #f ;no test provided + #:phases + (modify-phases %standard-phases + (replace 'configure + (lambda* (#:key outputs #:allow-other-keys) + (mkdir-p "build") + (chdir "build") + (invoke + "cmake" + "-G" "Unix Makefiles" + "-DCMAKE_BUILD_TYPE=Release" + (string-append "-DCMAKE_INSTALL_PREFIX=" (assoc-ref outputs "out")) + "..")))))) + (native-inputs + `(("boost" ,boost) + ("pkg-config" ,pkg-config))) + (inputs + `(("cfitsio" ,cfitsio) + ("freeimage" ,freeimage) + ("glew" ,glew) + ("wxwidgets" ,wxwidgets))) + (home-page "https://github.com/GreatAttractor/imppg") + (synopsis "Astronomical Image Post-Proccessor (ImPPG)") + (description + "ImPPG performs Lucy-Richardson deconvolution, unsharp masking, +brightness normalization and tone curve adjustment. It can also apply +previously specified processing settings to multiple images. All operations +are performed using 32-bit floating-point arithmetic. + +Supported input formats: FITS, BMP, JPEG, PNG, TIFF (most of bit depths and +compression methods), TGA and more. Images are processed in grayscale and can +be saved as: BMP 8-bit; PNG 8-bit; TIFF 8-bit, 16-bit, 32-bit +floating-point (no compression, LZW- or ZIP-compressed), FITS 8-bit, 16-bit, +32-bit floating-point.") + (license license:gpl3+))) + (define-public indi (package (name "indi") - (version "1.9.2") + (version "1.9.3") (source (origin (method git-fetch) @@ -1000,7 +1053,7 @@ It can be used to calculate the trajectory of satellites.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "00dlvp682xg2sdxm7ix55zp6311mgnd543q45drrc7kjlgaqvip4")))) + (base32 "0c7md288d3g2vf0m1ai6x2l4j4rmlasc4rya92phvd4ynf8vcki2")))) (build-system cmake-build-system) (arguments `(#:configure-flags diff --git a/gnu/packages/audio.scm b/gnu/packages/audio.scm index a6238835bc..4dd813b73a 100644 --- a/gnu/packages/audio.scm +++ b/gnu/packages/audio.scm @@ -34,6 +34,7 @@ ;;; Copyright © 2020 Giacomo Leidi <goodoldpaul@autistici.org> ;;; Copyright © 2020, 2021 Vinicius Monego <monego@posteo.net> ;;; Copyright © 2020 Michael Rohleder <mike@rohleder.de> +;;; Copyright © 2021 jgart <jgart@dismail.de> ;;; ;;; This file is part of GNU Guix. ;;; @@ -5532,6 +5533,60 @@ generator, generating audio signals out of Linux's /dev/dsp audio device. There is support for mono and/or stereo and 8 or 16 bit samples.") (license license:gpl2))) +(define-public python-pysox + ;; PyPi does not include the data folder containing audio files for testing. + (let ((commit "3d0053381c24ae3490f759d4de87194b85789d36") + (revision "0")) + (package + (name "python-pysox") + (version (git-version "1.4.2" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/rabitt/pysox") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0i62jx92vfpcr2z7lp69yzqdi9idfs3pifl3rzm2akc2c4cr1mac")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-sox + (lambda* (#:key inputs #:allow-other-keys) + (let* ((sox-store-path (assoc-ref inputs "sox")) + (sox-bin (string-append sox-store-path "/bin/sox"))) + (substitute* "sox/__init__.py" + (("sox -h") + (string-append sox-bin " -h"))) + (substitute* "sox/core.py" + (("\\['sox") + (string-append "['" sox-bin)))))) + (replace 'check + (lambda* (#:key inputs outputs tests? #:allow-other-keys) + (when tests? + (add-installed-pythonpath inputs outputs) + (invoke "pytest"))))))) + (propagated-inputs + `(("python-numpy" ,python-numpy) + ("python-typing-extensions" ,python-typing-extensions))) + (native-inputs + `(("sox" ,sox) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov) + ("python-soundfile" ,python-soundfile))) + (home-page "https://github.com/rabitt/pysox") + (synopsis "Python wrapper around SoX") + (description "@code{python-pysox} is a wrapper around the @command{sox} +command line tool. The API offers @code{Transformer} and @code{Combiner} +classes that allow the user to incrementally build up effects and audio +manipulations. @code{python-pysox} also provides methods for querying audio +information such as sample rate, determining whether an audio file is silent, +and much more.") + (license license:bsd-3)))) + (define-public mda-lv2 (package (name "mda-lv2") diff --git a/gnu/packages/aux-files/emacs/guix-emacs.el b/gnu/packages/aux-files/emacs/guix-emacs.el index ca9146c535..eff44bfe90 100644 --- a/gnu/packages/aux-files/emacs/guix-emacs.el +++ b/gnu/packages/aux-files/emacs/guix-emacs.el @@ -26,6 +26,7 @@ ;;; Code: (require 'seq) +(declare-function package-load-descriptor "package" (pkg-dir)) (defvar guix-emacs-autoloads-regexp (rx (* any) "-autoloads.el" (zero-or-one "c") string-end) @@ -39,6 +40,12 @@ The files in the list do not have extensions (.el, .elc)." (directory-files directory 'full-name guix-emacs-autoloads-regexp)))) +(defun guix-emacs--non-core-load-path () + ;; Filter out core Elisp directories, which are already handled by Emacs. + (seq-filter (lambda (dir) + (string-match-p "/share/emacs/site-lisp" dir)) + load-path)) + ;;;###autoload (defun guix-emacs-autoload-packages () "Autoload Emacs packages found in EMACSLOADPATH. @@ -46,18 +53,29 @@ The files in the list do not have extensions (.el, .elc)." 'Autoload' means to load the 'autoloads' files matching `guix-emacs-autoloads-regexp'." (interactive) - (let* ((emacs-non-core-load-path-directories - ;; Filter out core Elisp directories, which are already autoloaded - ;; by Emacs. - (seq-filter (lambda (dir) - (string-match-p "/share/emacs/site-lisp" dir)) - load-path)) - (autoloads (mapcan #'guix-emacs-find-autoloads - emacs-non-core-load-path-directories))) + (let ((autoloads (mapcan #'guix-emacs-find-autoloads + (guix-emacs--non-core-load-path)))) (mapc (lambda (f) (load f 'noerror)) autoloads))) +;;;###autoload +(defun guix-emacs-load-package-descriptors () + "Load descriptors for packages found in EMACSLOADPATH via subdirs.el." + (dolist (dir (guix-emacs--non-core-load-path)) + (let ((subdirs-file (expand-file-name "subdirs.el" dir))) + (when (file-exists-p subdirs-file) + (with-temp-buffer + (insert-file-contents subdirs-file) + (goto-char (point-min)) + (let ((subdirs (read (current-buffer)))) + (and (equal (car-safe subdirs) 'normal-top-level-add-to-load-path) + (equal (car-safe (cadr subdirs)) 'list) + (dolist (subdir (cdadr subdirs)) + (let ((pkg-dir (expand-file-name subdir dir))) + (when (file-directory-p pkg-dir) + (package-load-descriptor pkg-dir))))))))))) + (provide 'guix-emacs) ;;; guix-emacs.el ends here diff --git a/gnu/packages/aux-files/linux-libre/5.14-arm.conf b/gnu/packages/aux-files/linux-libre/5.15-arm.conf index fe395f36c6..08f4863548 100644 --- a/gnu/packages/aux-files/linux-libre/5.14-arm.conf +++ b/gnu/packages/aux-files/linux-libre/5.15-arm.conf @@ -1,17 +1,18 @@ # # Automatically generated file; DO NOT EDIT. -# Linux/arm 5.14.0 Kernel Configuration +# Linux/arm 5.15.4 Kernel Configuration # -CONFIG_CC_VERSION_TEXT="gcc (Debian 8.3.0-6) 8.3.0" +CONFIG_CC_VERSION_TEXT="gcc (GCC) 11.2.0" CONFIG_CC_IS_GCC=y -CONFIG_GCC_VERSION=80300 +CONFIG_GCC_VERSION=110200 CONFIG_CLANG_VERSION=0 CONFIG_AS_IS_GNU=y -CONFIG_AS_VERSION=23101 +CONFIG_AS_VERSION=23400 CONFIG_LD_IS_BFD=y -CONFIG_LD_VERSION=23101 +CONFIG_LD_VERSION=23400 CONFIG_LLD_VERSION=0 CONFIG_CC_HAS_ASM_GOTO=y +CONFIG_CC_HAS_ASM_GOTO_OUTPUT=y CONFIG_CC_HAS_ASM_INLINE=y CONFIG_CC_HAS_NO_PROFILE_FN_ATTR=y CONFIG_IRQ_WORK=y @@ -22,6 +23,7 @@ CONFIG_BUILDTIME_TABLE_SORT=y # CONFIG_INIT_ENV_ARG_LIMIT=32 # CONFIG_COMPILE_TEST is not set +# CONFIG_WERROR is not set CONFIG_LOCALVERSION="" # CONFIG_LOCALVERSION_AUTO is not set CONFIG_BUILD_SALT="" @@ -147,6 +149,7 @@ CONFIG_BUILD_BIN2C=y CONFIG_LOG_BUF_SHIFT=17 CONFIG_LOG_CPU_MAX_BUF_SHIFT=12 CONFIG_PRINTK_SAFE_LOG_BUF_SHIFT=13 +# CONFIG_PRINTK_INDEX is not set CONFIG_GENERIC_SCHED_CLOCK=y # @@ -211,12 +214,12 @@ CONFIG_MULTIUSER=y CONFIG_FHANDLE=y CONFIG_POSIX_TIMERS=y CONFIG_PRINTK=y -CONFIG_PRINTK_NMI=y CONFIG_BUG=y CONFIG_ELF_CORE=y CONFIG_BASE_FULL=y CONFIG_FUTEX=y CONFIG_FUTEX_PI=y +CONFIG_HAVE_FUTEX_CMPXCHG=y CONFIG_EPOLL=y CONFIG_SIGNALFD=y CONFIG_TIMERFD=y @@ -269,7 +272,6 @@ CONFIG_HAVE_PROC_CPU=y CONFIG_NO_IOPORT_MAP=y CONFIG_STACKTRACE_SUPPORT=y CONFIG_LOCKDEP_SUPPORT=y -CONFIG_TRACE_IRQFLAGS_SUPPORT=y CONFIG_ARCH_HAS_BANDGAP=y CONFIG_FIX_EARLYCON_MEM=y CONFIG_GENERIC_HWEIGHT=y @@ -447,13 +449,10 @@ CONFIG_SOC_HAS_OMAP2_SDRC=y CONFIG_SOC_HAS_REALTIME_COUNTER=y CONFIG_SOC_OMAP3430=y CONFIG_SOC_TI81XX=y -CONFIG_OMAP_PACKAGE_CBB=y # # OMAP Legacy Platform Data Board Type # -CONFIG_MACH_OMAP3517EVM=y -CONFIG_MACH_OMAP3_PANDORA=y # CONFIG_OMAP3_SDRC_AC_TIMING is not set # end of TI OMAP2/3/4 Specific Features @@ -623,6 +622,7 @@ CONFIG_PARAVIRT=y # CONFIG_PARAVIRT_TIME_ACCOUNTING is not set CONFIG_XEN_DOM0=y CONFIG_XEN=y +CONFIG_STACKPROTECTOR_PER_TASK=y # end of Kernel Features # @@ -743,50 +743,6 @@ CONFIG_ARM_CPU_SUSPEND=y CONFIG_ARCH_HIBERNATION_POSSIBLE=y # end of Power management options -# -# Firmware Drivers -# -CONFIG_ARM_SCMI_PROTOCOL=y -CONFIG_ARM_SCMI_POWER_DOMAIN=m -# CONFIG_ARM_SCPI_PROTOCOL is not set -# CONFIG_FIRMWARE_MEMMAP is not set -CONFIG_DMIID=y -CONFIG_DMI_SYSFS=y -CONFIG_RASPBERRYPI_FIRMWARE=y -CONFIG_TRUSTED_FOUNDATIONS=y -# CONFIG_TURRIS_MOX_RWTM is not set -# CONFIG_GOOGLE_FIRMWARE is not set - -# -# EFI (Extensible Firmware Interface) Support -# -CONFIG_EFI_ESRT=y -CONFIG_EFI_PARAMS_FROM_FDT=y -CONFIG_EFI_RUNTIME_WRAPPERS=y -CONFIG_EFI_GENERIC_STUB=y -CONFIG_EFI_ARMSTUB_DTB_LOADER=y -CONFIG_EFI_GENERIC_STUB_INITRD_CMDLINE_LOADER=y -# CONFIG_EFI_BOOTLOADER_CONTROL is not set -# CONFIG_EFI_CAPSULE_LOADER is not set -# CONFIG_EFI_TEST is not set -CONFIG_RESET_ATTACK_MITIGATION=y -# CONFIG_EFI_DISABLE_PCI_DMA is not set -# end of EFI (Extensible Firmware Interface) Support - -# CONFIG_IMX_DSP is not set -# CONFIG_IMX_SCU is not set -CONFIG_ARM_PSCI_FW=y -CONFIG_HAVE_ARM_SMCCC=y -CONFIG_HAVE_ARM_SMCCC_DISCOVERY=y -CONFIG_ARM_SMCCC_SOC_ID=y - -# -# Tegra firmware driver -# -# CONFIG_TEGRA_IVC is not set -# end of Tegra firmware driver -# end of Firmware Drivers - CONFIG_ARM_CRYPTO=y CONFIG_CRYPTO_SHA1_ARM=m CONFIG_CRYPTO_SHA256_ARM=m @@ -801,7 +757,6 @@ CONFIG_CRYPTO_POLY1305_ARM=m # CONFIG_CRASH_CORE=y CONFIG_KEXEC_CORE=y -CONFIG_SET_FS=y CONFIG_KPROBES=y CONFIG_JUMP_LABEL=y # CONFIG_STATIC_KEYS_SELFTEST is not set @@ -814,6 +769,7 @@ CONFIG_HAVE_KPROBES=y CONFIG_HAVE_KRETPROBES=y CONFIG_HAVE_OPTPROBES=y CONFIG_HAVE_NMI=y +CONFIG_TRACE_IRQFLAGS_SUPPORT=y CONFIG_HAVE_ARCH_TRACEHOOK=y CONFIG_HAVE_DMA_CONTIGUOUS=y CONFIG_GENERIC_SMP_IDLE_THREAD=y @@ -873,6 +829,11 @@ CONFIG_ARCH_HAS_GCOV_PROFILE_ALL=y # end of GCOV-based kernel profiling CONFIG_HAVE_GCC_PLUGINS=y +CONFIG_GCC_PLUGINS=y +# CONFIG_GCC_PLUGIN_CYC_COMPLEXITY is not set +CONFIG_GCC_PLUGIN_LATENT_ENTROPY=y +# CONFIG_GCC_PLUGIN_RANDSTRUCT is not set +CONFIG_GCC_PLUGIN_ARM_SSP_PER_TASK=y # end of General architecture-dependent options CONFIG_RT_MUTEXES=y @@ -894,16 +855,14 @@ CONFIG_MODPROBE_PATH="/run/current-system/profile/bin/modprobe" CONFIG_MODULES_TREE_LOOKUP=y CONFIG_BLOCK=y CONFIG_BLK_RQ_ALLOC_TIME=y -CONFIG_BLK_SCSI_REQUEST=y CONFIG_BLK_CGROUP_RWSTAT=y -CONFIG_BLK_DEV_BSG=y +CONFIG_BLK_DEV_BSG_COMMON=y CONFIG_BLK_DEV_BSGLIB=y CONFIG_BLK_DEV_INTEGRITY=y CONFIG_BLK_DEV_INTEGRITY_T10=y # CONFIG_BLK_DEV_ZONED is not set CONFIG_BLK_DEV_THROTTLING=y # CONFIG_BLK_DEV_THROTTLING_LOW is not set -# CONFIG_BLK_CMDLINE_PARSER is not set CONFIG_BLK_WBT=y CONFIG_BLK_WBT_MQ=y # CONFIG_BLK_CGROUP_IOLATENCY is not set @@ -943,6 +902,7 @@ CONFIG_BLK_MQ_PCI=y CONFIG_BLK_MQ_VIRTIO=y CONFIG_BLK_MQ_RDMA=y CONFIG_BLK_PM=y +CONFIG_BLOCK_HOLDER_DEPRECATED=y # # IO Schedulers @@ -1029,12 +989,21 @@ CONFIG_ZBUD=y CONFIG_ZSMALLOC=m # CONFIG_ZSMALLOC_STAT is not set CONFIG_GENERIC_EARLY_IOREMAP=y +CONFIG_PAGE_IDLE_FLAG=y # CONFIG_IDLE_PAGE_TRACKING is not set CONFIG_ZONE_DMA=y CONFIG_HMM_MIRROR=y # CONFIG_PERCPU_STATS is not set # CONFIG_GUP_TEST is not set CONFIG_KMAP_LOCAL=y + +# +# Data Access Monitoring +# +CONFIG_DAMON=y +CONFIG_DAMON_VADDR=y +# CONFIG_DAMON_DBGFS is not set +# end of Data Access Monitoring # end of Memory Management options CONFIG_NET=y @@ -1050,6 +1019,7 @@ CONFIG_PACKET=y CONFIG_PACKET_DIAG=m CONFIG_UNIX=y CONFIG_UNIX_SCM=y +CONFIG_AF_UNIX_OOB=y CONFIG_UNIX_DIAG=m # CONFIG_TLS is not set CONFIG_XFRM=y @@ -1153,6 +1123,7 @@ CONFIG_IPV6_PIMSM_V2=y # CONFIG_IPV6_SEG6_LWTUNNEL is not set # CONFIG_IPV6_SEG6_HMAC is not set # CONFIG_IPV6_RPL_LWTUNNEL is not set +# CONFIG_IPV6_IOAM6_LWTUNNEL is not set # CONFIG_NETLABEL is not set CONFIG_MPTCP=y CONFIG_INET_MPTCP_DIAG=m @@ -1570,7 +1541,6 @@ CONFIG_BRIDGE_VLAN_FILTERING=y CONFIG_BRIDGE_MRP=y CONFIG_BRIDGE_CFM=y CONFIG_NET_DSA=m -CONFIG_NET_DSA_TAG_8021Q=m CONFIG_NET_DSA_TAG_AR9331=m CONFIG_NET_DSA_TAG_BRCM_COMMON=m CONFIG_NET_DSA_TAG_BRCM=m @@ -1883,6 +1853,7 @@ CONFIG_AF_RXRPC_IPV6=y # CONFIG_AF_RXRPC_DEBUG is not set CONFIG_RXKAD=y # CONFIG_AF_KCM is not set +CONFIG_MCTP=m CONFIG_FIB_RULES=y CONFIG_WIRELESS=y CONFIG_WIRELESS_EXT=y @@ -2005,7 +1976,6 @@ CONFIG_PCIE_BUS_DEFAULT=y # CONFIG_PCI_MVEBU=y # CONFIG_PCI_FTPCI100 is not set -# CONFIG_PCI_IXP4XX is not set CONFIG_PCI_TEGRA=y CONFIG_PCI_HOST_COMMON=y CONFIG_PCI_HOST_GENERIC=y @@ -2029,6 +1999,7 @@ CONFIG_PCI_EXYNOS=m CONFIG_PCI_IMX6=y # CONFIG_PCI_LAYERSCAPE is not set # CONFIG_PCIE_ARMADA_8K is not set +CONFIG_PCIE_ROCKCHIP_DW_HOST=y # CONFIG_PCI_MESON is not set # end of DesignWare PCI Core Support @@ -2123,7 +2094,6 @@ CONFIG_ARM_CCI400_PORT_CTRL=y CONFIG_MVEBU_MBUS=y CONFIG_OMAP_INTERCONNECT=y CONFIG_OMAP_OCP2SCP=m -CONFIG_SIMPLE_PM_BUS=y CONFIG_SUN50I_DE2_BUS=y CONFIG_SUNXI_RSB=y # CONFIG_TEGRA_GMI is not set @@ -2137,6 +2107,65 @@ CONFIG_MHI_BUS_PCI_GENERIC=m CONFIG_CONNECTOR=y CONFIG_PROC_EVENTS=y + +# +# Firmware Drivers +# + +# +# ARM System Control and Management Interface Protocol +# +CONFIG_ARM_SCMI_PROTOCOL=y +CONFIG_ARM_SCMI_HAVE_TRANSPORT=y +CONFIG_ARM_SCMI_HAVE_SHMEM=y +CONFIG_ARM_SCMI_TRANSPORT_MAILBOX=y +CONFIG_ARM_SCMI_TRANSPORT_SMC=y +CONFIG_ARM_SCMI_POWER_DOMAIN=m +# end of ARM System Control and Management Interface Protocol + +# CONFIG_ARM_SCPI_PROTOCOL is not set +# CONFIG_FIRMWARE_MEMMAP is not set +CONFIG_DMIID=y +CONFIG_DMI_SYSFS=y +CONFIG_RASPBERRYPI_FIRMWARE=y +CONFIG_QCOM_SCM=m +# CONFIG_QCOM_SCM_DOWNLOAD_MODE_DEFAULT is not set +CONFIG_SYSFB=y +# CONFIG_SYSFB_SIMPLEFB is not set +CONFIG_TRUSTED_FOUNDATIONS=y +# CONFIG_TURRIS_MOX_RWTM is not set +# CONFIG_GOOGLE_FIRMWARE is not set + +# +# EFI (Extensible Firmware Interface) Support +# +CONFIG_EFI_ESRT=y +CONFIG_EFI_PARAMS_FROM_FDT=y +CONFIG_EFI_RUNTIME_WRAPPERS=y +CONFIG_EFI_GENERIC_STUB=y +CONFIG_EFI_ARMSTUB_DTB_LOADER=y +CONFIG_EFI_GENERIC_STUB_INITRD_CMDLINE_LOADER=y +# CONFIG_EFI_BOOTLOADER_CONTROL is not set +# CONFIG_EFI_CAPSULE_LOADER is not set +# CONFIG_EFI_TEST is not set +CONFIG_RESET_ATTACK_MITIGATION=y +# CONFIG_EFI_DISABLE_PCI_DMA is not set +# end of EFI (Extensible Firmware Interface) Support + +# CONFIG_IMX_DSP is not set +# CONFIG_IMX_SCU is not set +CONFIG_ARM_PSCI_FW=y +CONFIG_HAVE_ARM_SMCCC=y +CONFIG_HAVE_ARM_SMCCC_DISCOVERY=y +CONFIG_ARM_SMCCC_SOC_ID=y + +# +# Tegra firmware driver +# +# CONFIG_TEGRA_IVC is not set +# end of Tegra firmware driver +# end of Firmware Drivers + CONFIG_GNSS=m CONFIG_MTD=y # CONFIG_MTD_TESTS is not set @@ -2157,6 +2186,10 @@ CONFIG_MTD_OF_PARTS=m CONFIG_MTD_BLKDEVS=m CONFIG_MTD_BLOCK=m CONFIG_MTD_BLOCK_RO=m + +# +# Note that in some cases UBI block is preferred. See MTD_UBI_BLOCK. +# # CONFIG_FTL is not set # CONFIG_NFTL is not set # CONFIG_INFTL is not set @@ -2383,6 +2416,7 @@ CONFIG_TIFM_CORE=m CONFIG_TIFM_7XX1=m CONFIG_ICS932S401=m CONFIG_ENCLOSURE_SERVICES=m +CONFIG_GEHC_ACHC=m # CONFIG_HP_ILO is not set CONFIG_APDS9802ALS=m CONFIG_ISL29003=m @@ -2444,6 +2478,7 @@ CONFIG_UACCE=m # CONFIG_SCSI_MOD=m CONFIG_RAID_ATTRS=m +CONFIG_SCSI_COMMON=m CONFIG_SCSI=m CONFIG_SCSI_DMA=y CONFIG_SCSI_NETLINK=y @@ -2456,6 +2491,7 @@ CONFIG_BLK_DEV_SD=m CONFIG_CHR_DEV_ST=m CONFIG_BLK_DEV_SR=m CONFIG_CHR_DEV_SG=m +CONFIG_BLK_DEV_BSG=y CONFIG_CHR_DEV_SCH=m CONFIG_SCSI_ENCLOSURE=m CONFIG_SCSI_CONSTANTS=y @@ -2514,6 +2550,7 @@ CONFIG_SCSI_UFSHCD_PCI=m # CONFIG_SCSI_UFSHCD_PLATFORM is not set # CONFIG_SCSI_UFS_BSG is not set CONFIG_SCSI_UFS_CRYPTO=y +CONFIG_SCSI_UFS_HPB=y # CONFIG_SCSI_HPTIOP is not set # CONFIG_SCSI_MYRB is not set # CONFIG_SCSI_MYRS is not set @@ -2689,7 +2726,6 @@ CONFIG_DM_THIN_PROVISIONING=m CONFIG_DM_CACHE=m CONFIG_DM_CACHE_SMQ=m # CONFIG_DM_WRITECACHE is not set -# CONFIG_DM_EBS is not set CONFIG_DM_ERA=m CONFIG_DM_CLONE=m CONFIG_DM_MIRROR=m @@ -2894,7 +2930,8 @@ CONFIG_CHELSIO_T4VF=m CONFIG_CHELSIO_LIB=m CONFIG_CHELSIO_INLINE_CRYPTO=y CONFIG_NET_VENDOR_CIRRUS=y -# CONFIG_CS89x0 is not set +CONFIG_CS89x0=m +CONFIG_CS89x0_PLATFORM=m CONFIG_NET_VENDOR_CISCO=y CONFIG_ENIC=m CONFIG_NET_VENDOR_CORTINA=y @@ -2972,6 +3009,8 @@ CONFIG_I40EVF=m # CONFIG_IGC is not set CONFIG_NET_VENDOR_MICROSOFT=y CONFIG_JME=m +CONFIG_NET_VENDOR_LITEX=y +CONFIG_LITEX_LITEETH=m CONFIG_NET_VENDOR_MARVELL=y # CONFIG_MV643XX_ETH is not set CONFIG_MVMDIO=m @@ -3172,6 +3211,7 @@ CONFIG_LSI_ET1011C_PHY=m CONFIG_MARVELL_PHY=m # CONFIG_MARVELL_10G_PHY is not set CONFIG_MARVELL_88X2222_PHY=m +CONFIG_MAXLINEAR_GPHY=m CONFIG_MEDIATEK_GE_PHY=m CONFIG_MICREL_PHY=m CONFIG_MICROCHIP_PHY=m @@ -3197,6 +3237,10 @@ CONFIG_DP83869_PHY=m CONFIG_VITESSE_PHY=m # CONFIG_XILINX_GMII2RGMII is not set # CONFIG_MICREL_KS8995MA is not set + +# +# MCTP Device Drivers +# CONFIG_MDIO_DEVICE=y CONFIG_MDIO_BUS=y CONFIG_FWNODE_MDIO=y @@ -3439,7 +3483,6 @@ CONFIG_P54_USB=m CONFIG_P54_PCI=m # CONFIG_P54_SPI is not set CONFIG_P54_LEDS=y -# CONFIG_PRISM54 is not set CONFIG_WLAN_VENDOR_MARVELL=y CONFIG_LIBERTAS=m CONFIG_LIBERTAS_USB=m @@ -3566,6 +3609,7 @@ CONFIG_IEEE802154_ADF7242=m CONFIG_WWAN=y # CONFIG_WWAN_HWSIM is not set CONFIG_MHI_WWAN_CTRL=m +CONFIG_MHI_WWAN_MBIM=m # end of Wireless WAN CONFIG_XEN_NETDEV_FRONTEND=m @@ -3575,7 +3619,6 @@ CONFIG_USB4_NET=m CONFIG_NETDEVSIM=m CONFIG_NET_FAILOVER=m # CONFIG_ISDN is not set -# CONFIG_NVM is not set # # Input device support @@ -3965,6 +4008,7 @@ CONFIG_HW_RANDOM_VIRTIO=m CONFIG_HW_RANDOM_EXYNOS=m CONFIG_HW_RANDOM_CCTRNG=m CONFIG_HW_RANDOM_XIPHERA=m +CONFIG_HW_RANDOM_ARM_SMCCC_TRNG=m # CONFIG_APPLICOM is not set CONFIG_DEVMEM=y CONFIG_DEVPORT=y @@ -3982,9 +4026,8 @@ CONFIG_TCG_TIS_I2C_CR50=m CONFIG_XILLYBUS_CLASS=m # CONFIG_XILLYBUS is not set CONFIG_XILLYUSB=m -# end of Character devices - # CONFIG_RANDOM_TRUST_BOOTLOADER is not set +# end of Character devices # # I2C support @@ -4084,6 +4127,7 @@ CONFIG_I2C_VIPERBOARD=m # Other I2C/SMBus bus drivers # CONFIG_I2C_CROS_EC_TUNNEL=m +CONFIG_I2C_VIRTIO=m # end of I2C Hardware Bus support # CONFIG_I2C_STUB is not set @@ -4129,6 +4173,7 @@ CONFIG_SPI_ORION=m CONFIG_SPI_PL022=m # CONFIG_SPI_PXA2XX is not set CONFIG_SPI_ROCKCHIP=m +CONFIG_SPI_ROCKCHIP_SFC=m # CONFIG_SPI_S3C64XX is not set # CONFIG_SPI_SC18IS602 is not set # CONFIG_SPI_SIFIVE is not set @@ -4192,6 +4237,7 @@ CONFIG_PPS_CLIENT_PARPORT=m # PTP clock support # CONFIG_PTP_1588_CLOCK=y +CONFIG_PTP_1588_CLOCK_OPTIONAL=y CONFIG_PTP_1588_CLOCK_QORIQ=m # @@ -4232,6 +4278,7 @@ CONFIG_PINCTRL_IMX8MM=y CONFIG_PINCTRL_IMX8MN=y CONFIG_PINCTRL_IMX8MP=y CONFIG_PINCTRL_IMX8MQ=y +# CONFIG_PINCTRL_IMX8ULP is not set CONFIG_PINCTRL_MVEBU=y CONFIG_PINCTRL_ARMADA_370=y CONFIG_PINCTRL_ARMADA_375=y @@ -4309,6 +4356,7 @@ CONFIG_GPIO_MVEBU=y CONFIG_GPIO_MXC=y CONFIG_GPIO_OMAP=y CONFIG_GPIO_PL061=y +CONFIG_GPIO_ROCKCHIP=m # CONFIG_GPIO_SAMA5D2_PIOBU is not set CONFIG_GPIO_SIFIVE=y # CONFIG_GPIO_SYSCON is not set @@ -4382,6 +4430,7 @@ CONFIG_GPIO_VIPERBOARD=m # CONFIG_GPIO_AGGREGATOR=m # CONFIG_GPIO_MOCKUP is not set +CONFIG_GPIO_VIRTIO=m # end of Virtual GPIO drivers CONFIG_W1=m @@ -4465,7 +4514,6 @@ CONFIG_BATTERY_BQ27XXX_HDQ=m CONFIG_CHARGER_AXP20X=m CONFIG_BATTERY_AXP20X=m CONFIG_AXP20X_POWER=m -CONFIG_AXP288_FUEL_GAUGE=m # CONFIG_BATTERY_MAX17040 is not set # CONFIG_BATTERY_MAX17042 is not set CONFIG_BATTERY_MAX1721X=m @@ -4480,6 +4528,7 @@ CONFIG_CHARGER_GPIO=m # CONFIG_CHARGER_LT3651 is not set # CONFIG_CHARGER_LTC4162L is not set # CONFIG_CHARGER_DETECTOR_MAX14656 is not set +CONFIG_CHARGER_MT6360=m CONFIG_CHARGER_BQ2415X=m # CONFIG_CHARGER_BQ24190 is not set # CONFIG_CHARGER_BQ24257 is not set @@ -4494,6 +4543,7 @@ CONFIG_CHARGER_BQ2415X=m CONFIG_BATTERY_RT5033=m # CONFIG_CHARGER_RT9455 is not set CONFIG_CHARGER_CROS_USBPD=m +CONFIG_CHARGER_CROS_PCHG=m # CONFIG_CHARGER_UCS1002 is not set CONFIG_CHARGER_BD99954=m CONFIG_HWMON=y @@ -4520,6 +4570,7 @@ CONFIG_SENSORS_ADT7462=m CONFIG_SENSORS_ADT7470=m CONFIG_SENSORS_ADT7475=m CONFIG_SENSORS_AHT10=m +CONFIG_SENSORS_AQUACOMPUTER_D5NEXT=m # CONFIG_SENSORS_AS370 is not set CONFIG_SENSORS_ASC7621=m CONFIG_SENSORS_AXI_FAN_CONTROL=m @@ -4611,6 +4662,7 @@ CONFIG_SENSORS_NCT6775=m CONFIG_SENSORS_PWM_FAN=m CONFIG_SENSORS_RASPBERRYPI_HWMON=m CONFIG_SENSORS_SBTSI=m +CONFIG_SENSORS_SBRMI=m # CONFIG_SENSORS_SHT15 is not set CONFIG_SENSORS_SHT21=m # CONFIG_SENSORS_SHT3x is not set @@ -4734,7 +4786,6 @@ CONFIG_WATCHDOG_HRTIMER_PRETIMEOUT=y # Watchdog Device Drivers # CONFIG_SOFT_WATCHDOG=m -CONFIG_BD70528_WATCHDOG=m CONFIG_BD957XMUF_WATCHDOG=m CONFIG_DA9052_WATCHDOG=m # CONFIG_GPIO_WATCHDOG is not set @@ -4947,6 +4998,8 @@ CONFIG_MFD_KHADAS_MCU=m CONFIG_MFD_QCOM_PM8008=m CONFIG_MFD_VEXPRESS_SYSREG=y # CONFIG_MFD_INTEL_M10_BMC is not set +CONFIG_MFD_RSMU_I2C=m +CONFIG_MFD_RSMU_SPI=m # end of Multifunction device drivers CONFIG_REGULATOR=y @@ -5019,7 +5072,9 @@ CONFIG_REGULATOR_RT4801=m CONFIG_REGULATOR_RT4831=m CONFIG_REGULATOR_RT6160=m CONFIG_REGULATOR_RT6245=m +CONFIG_REGULATOR_RTQ2134=m CONFIG_REGULATOR_RTMV20=m +CONFIG_REGULATOR_RTQ6752=m CONFIG_REGULATOR_S2MPA01=m CONFIG_REGULATOR_S2MPS11=m CONFIG_REGULATOR_S5M8767=m @@ -5609,7 +5664,9 @@ CONFIG_VIDEO_IMX274=m CONFIG_VIDEO_IMX290=m CONFIG_VIDEO_IMX319=m CONFIG_VIDEO_IMX334=m +CONFIG_VIDEO_IMX335=m CONFIG_VIDEO_IMX355=m +CONFIG_VIDEO_IMX412=m CONFIG_VIDEO_OV02A10=m CONFIG_VIDEO_OV2640=m CONFIG_VIDEO_OV2659=m @@ -5630,6 +5687,7 @@ CONFIG_VIDEO_OV7670=m CONFIG_VIDEO_OV7740=m CONFIG_VIDEO_OV8856=m CONFIG_VIDEO_OV8865=m +CONFIG_VIDEO_OV9282=m CONFIG_VIDEO_OV9640=m CONFIG_VIDEO_OV9650=m CONFIG_VIDEO_OV13858=m @@ -5914,6 +5972,7 @@ CONFIG_IMX_IPUV3_CORE=m CONFIG_DRM=m CONFIG_DRM_MIPI_DBI=m CONFIG_DRM_MIPI_DSI=y +CONFIG_DRM_DP_AUX_BUS=m # CONFIG_DRM_DP_AUX_CHARDEV is not set # CONFIG_DRM_DEBUG_SELFTEST is not set CONFIG_DRM_KMS_HELPER=m @@ -6011,12 +6070,12 @@ CONFIG_OMAP2_DSS_MIN_FCK_PER_PCK=0 CONFIG_OMAP2_DSS_SLEEP_AFTER_VENC_RESET=y CONFIG_DRM_TILCDC=m CONFIG_DRM_QXL=m -CONFIG_DRM_BOCHS=m CONFIG_DRM_VIRTIO_GPU=m CONFIG_DRM_MSM=m CONFIG_DRM_MSM_GPU_STATE=y # CONFIG_DRM_MSM_REGISTER_LOGGING is not set # CONFIG_DRM_MSM_GPU_SUDO is not set +CONFIG_DRM_MSM_HDMI_HDCP=y CONFIG_DRM_MSM_DP=y CONFIG_DRM_MSM_DSI=y CONFIG_DRM_MSM_DSI_28NM_PHY=y @@ -6045,7 +6104,9 @@ CONFIG_DRM_PANEL_ELIDA_KD35T133=m CONFIG_DRM_PANEL_FEIXIN_K101_IM2BA02=m # CONFIG_DRM_PANEL_FEIYANG_FY07024DI26A30D is not set CONFIG_DRM_PANEL_ILITEK_IL9322=m +CONFIG_DRM_PANEL_ILITEK_ILI9341=m CONFIG_DRM_PANEL_ILITEK_ILI9881C=m +CONFIG_DRM_PANEL_INNOLUX_EJ030NA=m # CONFIG_DRM_PANEL_INNOLUX_P079ZCA is not set # CONFIG_DRM_PANEL_JDI_LT070ME05000 is not set # CONFIG_DRM_PANEL_KHADAS_TS050 is not set @@ -6068,6 +6129,8 @@ CONFIG_DRM_PANEL_RASPBERRYPI_TOUCHSCREEN=m # CONFIG_DRM_PANEL_RAYDIUM_RM67191 is not set # CONFIG_DRM_PANEL_RAYDIUM_RM68200 is not set # CONFIG_DRM_PANEL_RONBO_RB070D30 is not set +CONFIG_DRM_PANEL_SAMSUNG_ATNA33XC20=m +CONFIG_DRM_PANEL_SAMSUNG_DB7430=m # CONFIG_DRM_PANEL_SAMSUNG_S6D16D0 is not set # CONFIG_DRM_PANEL_SAMSUNG_S6E3HA2 is not set # CONFIG_DRM_PANEL_SAMSUNG_S6E63J0X03 is not set @@ -6090,6 +6153,7 @@ CONFIG_DRM_PANEL_SONY_ACX424AKP=m # CONFIG_DRM_PANEL_TPO_TPG110 is not set # CONFIG_DRM_PANEL_TRULY_NT35597_WQXGA is not set # CONFIG_DRM_PANEL_VISIONOX_RM69299 is not set +CONFIG_DRM_PANEL_WIDECHIPS_WS2401=m CONFIG_DRM_PANEL_XINPENG_XPP055C272=m # end of Display Panels @@ -6154,6 +6218,7 @@ CONFIG_DRM_ETNAVIV=m CONFIG_DRM_ETNAVIV_THERMAL=y # CONFIG_DRM_MXSFB is not set # CONFIG_DRM_ARCPGU is not set +CONFIG_DRM_BOCHS=m CONFIG_DRM_CIRRUS_QEMU=m CONFIG_DRM_GM12U320=m CONFIG_DRM_SIMPLEDRM=m @@ -6259,7 +6324,7 @@ CONFIG_FB_MB862XX=m CONFIG_FB_MB862XX_PCI_GDC=y CONFIG_FB_MB862XX_I2C=y CONFIG_FB_MX3=y -CONFIG_FB_SIMPLE=y +CONFIG_FB_SIMPLE=m # CONFIG_FB_SSD1307 is not set # CONFIG_FB_SM712 is not set # end of Frame buffer Devices @@ -6442,6 +6507,7 @@ CONFIG_SND_HDA_CODEC_SIGMATEL=m CONFIG_SND_HDA_CODEC_VIA=m CONFIG_SND_HDA_CODEC_HDMI=m CONFIG_SND_HDA_CODEC_CIRRUS=m +CONFIG_SND_HDA_CODEC_CS8409=m CONFIG_SND_HDA_CODEC_CONEXANT=m CONFIG_SND_HDA_CODEC_CA0110=m CONFIG_SND_HDA_CODEC_CA0132=m @@ -6673,6 +6739,7 @@ CONFIG_SND_SOC_ES8328=m CONFIG_SND_SOC_ES8328_I2C=m CONFIG_SND_SOC_ES8328_SPI=m # CONFIG_SND_SOC_GTM601 is not set +CONFIG_SND_SOC_ICS43432=m # CONFIG_SND_SOC_INNO_RK3036 is not set # CONFIG_SND_SOC_MAX98088 is not set CONFIG_SND_SOC_MAX98090=m @@ -6949,7 +7016,7 @@ CONFIG_USB_HIDDEV=y CONFIG_USB_OHCI_LITTLE_ENDIAN=y CONFIG_USB_SUPPORT=y -CONFIG_USB_COMMON=y +CONFIG_USB_COMMON=m CONFIG_USB_LED_TRIG=y CONFIG_USB_ULPI_BUS=m CONFIG_USB_CONN_GPIO=m @@ -7746,6 +7813,7 @@ CONFIG_SYNC_FILE=y # CONFIG_DMABUF_DEBUG is not set # CONFIG_DMABUF_SELFTESTS is not set # CONFIG_DMABUF_HEAPS is not set +# CONFIG_DMABUF_SYSFS_STATS is not set # end of DMABUF options # CONFIG_AUXDISPLAY is not set @@ -7776,11 +7844,13 @@ CONFIG_VIRTIO_MMIO=m CONFIG_VIRTIO_DMA_SHARED_BUFFER=m CONFIG_VDPA=m # CONFIG_VDPA_SIM is not set +CONFIG_VDPA_USER=m CONFIG_IFCVF=m CONFIG_MLX5_VDPA=y CONFIG_MLX5_VDPA_NET=m # CONFIG_VP_VDPA is not set CONFIG_VHOST_IOTLB=m +CONFIG_VHOST_RING=m CONFIG_VHOST=m CONFIG_VHOST_MENU=y CONFIG_VHOST_NET=m @@ -7901,6 +7971,7 @@ CONFIG_88EU_AP_MODE=y # CONFIG_FIREWIRE_SERIAL is not set # CONFIG_GS_FPGABOOT is not set # CONFIG_UNISYSSPAR is not set +CONFIG_COMMON_CLK_XLNX_CLKWZRD=m # CONFIG_FB_TFT is not set # CONFIG_KS7010 is not set CONFIG_BCM_VIDEOCORE=y @@ -8067,6 +8138,7 @@ CONFIG_BCM2835_MBOX=y # CONFIG_MAILBOX_TEST is not set # CONFIG_TEGRA_HSP_MBOX is not set CONFIG_SUN6I_MSGBOX=m +CONFIG_IOMMU_IOVA=m CONFIG_IOMMU_API=y CONFIG_IOMMU_SUPPORT=y @@ -8080,6 +8152,8 @@ CONFIG_IOMMU_IO_PGTABLE_LPAE=y # end of Generic IOMMU Pagetable Support # CONFIG_IOMMU_DEBUGFS is not set +# CONFIG_IOMMU_DEFAULT_DMA_STRICT is not set +CONFIG_IOMMU_DEFAULT_DMA_LAZY=y # CONFIG_IOMMU_DEFAULT_PASSTHROUGH is not set CONFIG_OF_IOMMU=y CONFIG_OMAP_IOMMU=y @@ -8389,6 +8463,7 @@ CONFIG_CCS811=m CONFIG_SCD30_CORE=m CONFIG_SCD30_I2C=m # CONFIG_SENSIRION_SGP30 is not set +CONFIG_SENSIRION_SGP40=m # CONFIG_SPS30_I2C is not set # CONFIG_VZ89X is not set # end of Chemical Sensors @@ -8650,6 +8725,7 @@ CONFIG_HID_SENSOR_DEVICE_ROTATION=m # # Digital potentiometers # +CONFIG_AD5110=m # CONFIG_AD5272 is not set # CONFIG_DS1803 is not set # CONFIG_MAX5432 is not set @@ -8992,11 +9068,11 @@ CONFIG_F2FS_FS_SECURITY=y # CONFIG_F2FS_CHECK_FS is not set # CONFIG_F2FS_FAULT_INJECTION is not set # CONFIG_F2FS_FS_COMPRESSION is not set +# CONFIG_F2FS_IOSTAT is not set CONFIG_FS_POSIX_ACL=y CONFIG_EXPORTFS=y CONFIG_EXPORTFS_BLOCK_OPS=y CONFIG_FILE_LOCKING=y -CONFIG_MANDATORY_FILE_LOCKING=y # CONFIG_FS_ENCRYPTION is not set CONFIG_FS_VERITY=y # CONFIG_FS_VERITY_DEBUG is not set @@ -9029,15 +9105,12 @@ CONFIG_OVERLAY_FS=m # Caches # CONFIG_NETFS_SUPPORT=m -# CONFIG_NETFS_STATS is not set +CONFIG_NETFS_STATS=y CONFIG_FSCACHE=m CONFIG_FSCACHE_STATS=y -# CONFIG_FSCACHE_HISTOGRAM is not set # CONFIG_FSCACHE_DEBUG is not set -# CONFIG_FSCACHE_OBJECT_LIST is not set CONFIG_CACHEFILES=m # CONFIG_CACHEFILES_DEBUG is not set -# CONFIG_CACHEFILES_HISTOGRAM is not set # end of Caches # @@ -9063,6 +9136,9 @@ CONFIG_EXFAT_DEFAULT_IOCHARSET="utf8" CONFIG_NTFS_FS=m # CONFIG_NTFS_DEBUG is not set # CONFIG_NTFS_RW is not set +CONFIG_NTFS3_FS=m +CONFIG_NTFS3_LZX_XPRESS=y +# CONFIG_NTFS3_FS_POSIX_ACL is not set # end of DOS/FAT/EXFAT/NT Filesystems # @@ -9214,7 +9290,6 @@ CONFIG_CEPH_FS_SECURITY_LABEL=y CONFIG_CIFS=m # CONFIG_CIFS_STATS2 is not set CONFIG_CIFS_ALLOW_INSECURE_LEGACY=y -CONFIG_CIFS_WEAK_PW_HASH=y CONFIG_CIFS_UPCALL=y CONFIG_CIFS_XATTR=y CONFIG_CIFS_POSIX=y @@ -9225,6 +9300,8 @@ CONFIG_CIFS_DFS_UPCALL=y CONFIG_CIFS_SWN_UPCALL=y # CONFIG_CIFS_SMB_DIRECT is not set CONFIG_CIFS_FSCACHE=y +# CONFIG_SMB_SERVER is not set +CONFIG_SMBFS_COMMON=m CONFIG_CODA_FS=m CONFIG_AFS_FS=m # CONFIG_AFS_DEBUG is not set @@ -9378,13 +9455,20 @@ CONFIG_LSM="yama,loadpin,safesetid,integrity,apparmor,selinux,smack,tomoyo" # # Kernel hardening options # +CONFIG_GCC_PLUGIN_STRUCTLEAK=y # # Memory initialization # -CONFIG_INIT_STACK_NONE=y +# CONFIG_INIT_STACK_NONE is not set +# CONFIG_GCC_PLUGIN_STRUCTLEAK_USER is not set +# CONFIG_GCC_PLUGIN_STRUCTLEAK_BYREF is not set +CONFIG_GCC_PLUGIN_STRUCTLEAK_BYREF_ALL=y +# CONFIG_GCC_PLUGIN_STRUCTLEAK_VERBOSE is not set CONFIG_INIT_ON_ALLOC_DEFAULT_ON=y # CONFIG_INIT_ON_FREE_DEFAULT_ON is not set +CONFIG_CC_HAS_ZERO_CALL_USED_REGS=y +# CONFIG_ZERO_CALL_USED_REGS is not set # end of Memory initialization # end of Kernel hardening options # end of Security options @@ -9574,6 +9658,7 @@ CONFIG_CRYPTO_LIB_POLY1305_GENERIC=m CONFIG_CRYPTO_LIB_POLY1305=m CONFIG_CRYPTO_LIB_CHACHA20POLY1305=m CONFIG_CRYPTO_LIB_SHA256=y +CONFIG_CRYPTO_LIB_SM4=m CONFIG_CRYPTO_HW=y CONFIG_CRYPTO_DEV_ALLWINNER=y CONFIG_CRYPTO_DEV_SUN4I_SS=m @@ -9709,6 +9794,7 @@ CONFIG_ARCH_HAS_TEARDOWN_DMA_OPS=y CONFIG_ARCH_HAS_SYNC_DMA_FOR_DEVICE=y CONFIG_ARCH_HAS_SYNC_DMA_FOR_CPU=y CONFIG_SWIOTLB=y +CONFIG_DMA_RESTRICTED_POOL=y CONFIG_DMA_NONCOHERENT_MMAP=y CONFIG_DMA_REMAP=y CONFIG_DMA_CMA=y @@ -9825,6 +9911,7 @@ CONFIG_DEBUG_FS_ALLOW_ALL=y CONFIG_HAVE_ARCH_KGDB=y # CONFIG_KGDB is not set # CONFIG_UBSAN is not set +CONFIG_HAVE_KCSAN_COMPILER=y # end of Generic Kernel Debugging Instruments CONFIG_DEBUG_KERNEL=y @@ -9936,7 +10023,6 @@ CONFIG_RCU_CPU_STALL_TIMEOUT=21 # end of RCU Debugging # CONFIG_DEBUG_WQ_FORCE_RR_CPU is not set -# CONFIG_DEBUG_BLOCK_EXT_DEVT is not set # CONFIG_CPU_HOTPLUG_STATE_CONTROL is not set # CONFIG_LATENCYTOP is not set CONFIG_NOP_TRACER=y @@ -10029,7 +10115,6 @@ CONFIG_CC_HAS_SANCOV_TRACE_PC=y CONFIG_RUNTIME_TESTING_MENU=y # CONFIG_LKDTM is not set # CONFIG_TEST_MIN_HEAP is not set -# CONFIG_TEST_SORT is not set # CONFIG_TEST_DIV64 is not set # CONFIG_KPROBES_SANITY_TEST is not set # CONFIG_BACKTRACE_SELF_TEST is not set diff --git a/gnu/packages/aux-files/linux-libre/5.14-arm64.conf b/gnu/packages/aux-files/linux-libre/5.15-arm64.conf index aab094173e..743e6cccc9 100644 --- a/gnu/packages/aux-files/linux-libre/5.14-arm64.conf +++ b/gnu/packages/aux-files/linux-libre/5.15-arm64.conf @@ -1,19 +1,20 @@ # # Automatically generated file; DO NOT EDIT. -# Linux/arm64 5.14.0 Kernel Configuration +# Linux/arm64 5.15.5 Kernel Configuration # -CONFIG_CC_VERSION_TEXT="gcc (Debian 8.3.0-6) 8.3.0" +CONFIG_CC_VERSION_TEXT="gcc (GCC) 11.2.0" CONFIG_CC_IS_GCC=y -CONFIG_GCC_VERSION=80300 +CONFIG_GCC_VERSION=110200 CONFIG_CLANG_VERSION=0 CONFIG_AS_IS_GNU=y -CONFIG_AS_VERSION=23101 +CONFIG_AS_VERSION=23400 CONFIG_LD_IS_BFD=y -CONFIG_LD_VERSION=23101 +CONFIG_LD_VERSION=23400 CONFIG_LLD_VERSION=0 CONFIG_CC_CAN_LINK=y CONFIG_CC_CAN_LINK_STATIC=y CONFIG_CC_HAS_ASM_GOTO=y +CONFIG_CC_HAS_ASM_GOTO_OUTPUT=y CONFIG_CC_HAS_ASM_INLINE=y CONFIG_CC_HAS_NO_PROFILE_FN_ATTR=y CONFIG_IRQ_WORK=y @@ -25,6 +26,7 @@ CONFIG_THREAD_INFO_IN_TASK=y # CONFIG_INIT_ENV_ARG_LIMIT=32 # CONFIG_COMPILE_TEST is not set +# CONFIG_WERROR is not set CONFIG_LOCALVERSION="" # CONFIG_LOCALVERSION_AUTO is not set CONFIG_BUILD_SALT="" @@ -142,6 +144,7 @@ CONFIG_BUILD_BIN2C=y CONFIG_LOG_BUF_SHIFT=17 CONFIG_LOG_CPU_MAX_BUF_SHIFT=12 CONFIG_PRINTK_SAFE_LOG_BUF_SHIFT=13 +# CONFIG_PRINTK_INDEX is not set CONFIG_GENERIC_SCHED_CLOCK=y # @@ -214,7 +217,6 @@ CONFIG_MULTIUSER=y CONFIG_FHANDLE=y CONFIG_POSIX_TIMERS=y CONFIG_PRINTK=y -CONFIG_PRINTK_NMI=y CONFIG_BUG=y CONFIG_ELF_CORE=y CONFIG_BASE_FULL=y @@ -279,7 +281,6 @@ CONFIG_ARCH_MMAP_RND_COMPAT_BITS_MAX=16 CONFIG_STACKTRACE_SUPPORT=y CONFIG_ILLEGAL_POINTER_VALUE=0xdead000000000000 CONFIG_LOCKDEP_SUPPORT=y -CONFIG_TRACE_IRQFLAGS_SUPPORT=y CONFIG_GENERIC_BUG=y CONFIG_GENERIC_BUG_RELATIVE_POINTERS=y CONFIG_GENERIC_HWEIGHT=y @@ -449,6 +450,7 @@ CONFIG_ARM64_CNP=y # ARMv8.3 architectural features # CONFIG_ARM64_PTR_AUTH=y +CONFIG_AS_HAS_CFI_NEGATE_RA_STATE=y # end of ARMv8.3 architectural features # @@ -586,67 +588,6 @@ CONFIG_ARM_TEGRA194_CPUFREQ=m # end of CPU Frequency scaling # end of CPU Power Management -# -# Firmware Drivers -# -CONFIG_ARM_SCMI_PROTOCOL=y -CONFIG_ARM_SCMI_POWER_DOMAIN=m -# CONFIG_ARM_SCPI_PROTOCOL is not set -# CONFIG_ARM_SDE_INTERFACE is not set -# CONFIG_FIRMWARE_MEMMAP is not set -CONFIG_DMIID=y -CONFIG_DMI_SYSFS=y -CONFIG_ISCSI_IBFT=m -CONFIG_RASPBERRYPI_FIRMWARE=y -# CONFIG_FW_CFG_SYSFS is not set -CONFIG_INTEL_STRATIX10_SERVICE=m -CONFIG_INTEL_STRATIX10_RSU=m -CONFIG_QCOM_SCM=y -# CONFIG_QCOM_SCM_DOWNLOAD_MODE_DEFAULT is not set -# CONFIG_TURRIS_MOX_RWTM is not set -CONFIG_ARM_FFA_TRANSPORT=m -CONFIG_ARM_FFA_SMCCC=y -# CONFIG_GOOGLE_FIRMWARE is not set - -# -# EFI (Extensible Firmware Interface) Support -# -CONFIG_EFI_ESRT=y -CONFIG_EFI_VARS_PSTORE=m -# CONFIG_EFI_VARS_PSTORE_DEFAULT_DISABLE is not set -CONFIG_EFI_SOFT_RESERVE=y -CONFIG_EFI_PARAMS_FROM_FDT=y -CONFIG_EFI_RUNTIME_WRAPPERS=y -CONFIG_EFI_GENERIC_STUB=y -CONFIG_EFI_ARMSTUB_DTB_LOADER=y -CONFIG_EFI_GENERIC_STUB_INITRD_CMDLINE_LOADER=y -# CONFIG_EFI_BOOTLOADER_CONTROL is not set -# CONFIG_EFI_CAPSULE_LOADER is not set -# CONFIG_EFI_TEST is not set -# CONFIG_RESET_ATTACK_MITIGATION is not set -# CONFIG_EFI_DISABLE_PCI_DMA is not set -# end of EFI (Extensible Firmware Interface) Support - -CONFIG_EFI_EARLYCON=y -CONFIG_EFI_CUSTOM_SSDT_OVERLAYS=y -# CONFIG_IMX_DSP is not set -CONFIG_IMX_SCU=y -CONFIG_IMX_SCU_PD=y -CONFIG_MESON_SM=y -CONFIG_ARM_PSCI_FW=y -# CONFIG_ARM_PSCI_CHECKER is not set -CONFIG_HAVE_ARM_SMCCC=y -CONFIG_HAVE_ARM_SMCCC_DISCOVERY=y -CONFIG_ARM_SMCCC_SOC_ID=y - -# -# Tegra firmware driver -# -CONFIG_TEGRA_IVC=y -CONFIG_TEGRA_BPMP=y -# end of Tegra firmware driver -# end of Firmware Drivers - CONFIG_ARCH_SUPPORTS_ACPI=y CONFIG_ACPI=y CONFIG_ACPI_GENERIC_GSI=y @@ -703,6 +644,8 @@ CONFIG_HAVE_KVM_ARCH_TLB_FLUSH_ALL=y CONFIG_KVM_GENERIC_DIRTYLOG_READ_PROTECT=y CONFIG_HAVE_KVM_IRQ_BYPASS=y CONFIG_HAVE_KVM_VCPU_RUN_PID_CHANGE=y +CONFIG_KVM_XFER_TO_GUEST_WORK=y +# CONFIG_NVHE_EL2_DEBUG is not set CONFIG_ARM64_CRYPTO=y CONFIG_CRYPTO_SHA256_ARM64=m # CONFIG_CRYPTO_SHA512_ARM64 is not set @@ -739,6 +682,7 @@ CONFIG_HAVE_KPROBES=y CONFIG_HAVE_KRETPROBES=y CONFIG_HAVE_FUNCTION_ERROR_INJECTION=y CONFIG_HAVE_NMI=y +CONFIG_TRACE_IRQFLAGS_SUPPORT=y CONFIG_HAVE_ARCH_TRACEHOOK=y CONFIG_HAVE_DMA_CONTIGUOUS=y CONFIG_GENERIC_SMP_IDLE_THREAD=y @@ -823,6 +767,10 @@ CONFIG_ARCH_HAS_GCOV_PROFILE_ALL=y # end of GCOV-based kernel profiling CONFIG_HAVE_GCC_PLUGINS=y +CONFIG_GCC_PLUGINS=y +# CONFIG_GCC_PLUGIN_CYC_COMPLEXITY is not set +CONFIG_GCC_PLUGIN_LATENT_ENTROPY=y +# CONFIG_GCC_PLUGIN_RANDSTRUCT is not set # end of General architecture-dependent options CONFIG_RT_MUTEXES=y @@ -845,16 +793,14 @@ CONFIG_MODPROBE_PATH="/run/current-system/profile/bin/modprobe" CONFIG_MODULES_TREE_LOOKUP=y CONFIG_BLOCK=y CONFIG_BLK_RQ_ALLOC_TIME=y -CONFIG_BLK_SCSI_REQUEST=y CONFIG_BLK_CGROUP_RWSTAT=y -CONFIG_BLK_DEV_BSG=y +CONFIG_BLK_DEV_BSG_COMMON=y CONFIG_BLK_DEV_BSGLIB=y CONFIG_BLK_DEV_INTEGRITY=y CONFIG_BLK_DEV_INTEGRITY_T10=m # CONFIG_BLK_DEV_ZONED is not set CONFIG_BLK_DEV_THROTTLING=y # CONFIG_BLK_DEV_THROTTLING_LOW is not set -# CONFIG_BLK_CMDLINE_PARSER is not set CONFIG_BLK_WBT=y CONFIG_BLK_WBT_MQ=y # CONFIG_BLK_CGROUP_IOLATENCY is not set @@ -896,6 +842,7 @@ CONFIG_BLK_MQ_PCI=y CONFIG_BLK_MQ_VIRTIO=y CONFIG_BLK_MQ_RDMA=y CONFIG_BLK_PM=y +CONFIG_BLOCK_HOLDER_DEPRECATED=y # # IO Schedulers @@ -1048,6 +995,7 @@ CONFIG_ZSMALLOC=m # CONFIG_ZSMALLOC_STAT is not set CONFIG_GENERIC_EARLY_IOREMAP=y # CONFIG_DEFERRED_STRUCT_PAGE_INIT is not set +CONFIG_PAGE_IDLE_FLAG=y # CONFIG_IDLE_PAGE_TRACKING is not set CONFIG_ARCH_HAS_CACHE_LINE_SIZE=y CONFIG_ARCH_HAS_PTE_DEVMAP=y @@ -1061,6 +1009,14 @@ CONFIG_HMM_MIRROR=y CONFIG_ARCH_HAS_PTE_SPECIAL=y CONFIG_MAPPING_DIRTY_HELPERS=y CONFIG_SECRETMEM=y + +# +# Data Access Monitoring +# +CONFIG_DAMON=y +CONFIG_DAMON_VADDR=y +# CONFIG_DAMON_DBGFS is not set +# end of Data Access Monitoring # end of Memory Management options CONFIG_NET=y @@ -1077,6 +1033,7 @@ CONFIG_PACKET=y CONFIG_PACKET_DIAG=m CONFIG_UNIX=y CONFIG_UNIX_SCM=y +CONFIG_AF_UNIX_OOB=y CONFIG_UNIX_DIAG=m # CONFIG_TLS is not set CONFIG_XFRM=y @@ -1182,6 +1139,7 @@ CONFIG_IPV6_SEG6_LWTUNNEL=y CONFIG_IPV6_SEG6_HMAC=y CONFIG_IPV6_SEG6_BPF=y # CONFIG_IPV6_RPL_LWTUNNEL is not set +# CONFIG_IPV6_IOAM6_LWTUNNEL is not set # CONFIG_NETLABEL is not set CONFIG_MPTCP=y CONFIG_INET_MPTCP_DIAG=m @@ -1600,7 +1558,6 @@ CONFIG_BRIDGE_VLAN_FILTERING=y CONFIG_BRIDGE_MRP=y CONFIG_BRIDGE_CFM=y CONFIG_NET_DSA=m -CONFIG_NET_DSA_TAG_8021Q=m CONFIG_NET_DSA_TAG_AR9331=m CONFIG_NET_DSA_TAG_BRCM_COMMON=m CONFIG_NET_DSA_TAG_BRCM=m @@ -1768,6 +1725,7 @@ CONFIG_VSOCKETS_DIAG=m CONFIG_VSOCKETS_LOOPBACK=m CONFIG_VIRTIO_VSOCKETS=m CONFIG_VIRTIO_VSOCKETS_COMMON=m +CONFIG_HYPERV_VSOCKETS=m CONFIG_NETLINK_DIAG=m CONFIG_MPLS=y CONFIG_NET_MPLS_GSO=y @@ -1927,6 +1885,7 @@ CONFIG_AF_RXRPC_IPV6=y # CONFIG_AF_RXRPC_DEBUG is not set CONFIG_RXKAD=y # CONFIG_AF_KCM is not set +CONFIG_MCTP=m CONFIG_FIB_RULES=y CONFIG_WIRELESS=y CONFIG_WIRELESS_EXT=y @@ -2083,11 +2042,15 @@ CONFIG_PCI_IMX6=y CONFIG_PCI_HISI=y CONFIG_PCIE_QCOM=y CONFIG_PCIE_ARMADA_8K=y +CONFIG_PCIE_ROCKCHIP_DW_HOST=y +CONFIG_PCIE_KEEMBAY=y +CONFIG_PCIE_KEEMBAY_HOST=y CONFIG_PCIE_KIRIN=y # CONFIG_PCIE_HISI_STB is not set # CONFIG_PCI_MESON is not set CONFIG_PCIE_TEGRA194=m CONFIG_PCIE_TEGRA194_HOST=m +CONFIG_PCIE_VISCONTI_HOST=y # CONFIG_PCIE_AL is not set # end of DesignWare PCI Core Support @@ -2179,7 +2142,6 @@ CONFIG_MOXTET=m # CONFIG_HISILICON_LPC is not set # CONFIG_IMX_WEIM is not set CONFIG_QCOM_EBI2=y -# CONFIG_SIMPLE_PM_BUS is not set CONFIG_SUN50I_DE2_BUS=y CONFIG_SUNXI_RSB=y CONFIG_TEGRA_ACONNECT=y @@ -2193,6 +2155,80 @@ CONFIG_MHI_BUS_PCI_GENERIC=m CONFIG_CONNECTOR=y CONFIG_PROC_EVENTS=y + +# +# Firmware Drivers +# + +# +# ARM System Control and Management Interface Protocol +# +CONFIG_ARM_SCMI_PROTOCOL=y +CONFIG_ARM_SCMI_HAVE_TRANSPORT=y +CONFIG_ARM_SCMI_HAVE_SHMEM=y +CONFIG_ARM_SCMI_TRANSPORT_MAILBOX=y +CONFIG_ARM_SCMI_TRANSPORT_SMC=y +CONFIG_ARM_SCMI_POWER_DOMAIN=m +# end of ARM System Control and Management Interface Protocol + +# CONFIG_ARM_SCPI_PROTOCOL is not set +# CONFIG_ARM_SDE_INTERFACE is not set +# CONFIG_FIRMWARE_MEMMAP is not set +CONFIG_DMIID=y +CONFIG_DMI_SYSFS=y +CONFIG_ISCSI_IBFT=m +CONFIG_RASPBERRYPI_FIRMWARE=y +# CONFIG_FW_CFG_SYSFS is not set +CONFIG_INTEL_STRATIX10_SERVICE=m +CONFIG_INTEL_STRATIX10_RSU=m +CONFIG_QCOM_SCM=y +# CONFIG_QCOM_SCM_DOWNLOAD_MODE_DEFAULT is not set +CONFIG_SYSFB=y +# CONFIG_SYSFB_SIMPLEFB is not set +# CONFIG_TURRIS_MOX_RWTM is not set +CONFIG_ARM_FFA_TRANSPORT=m +CONFIG_ARM_FFA_SMCCC=y +# CONFIG_GOOGLE_FIRMWARE is not set + +# +# EFI (Extensible Firmware Interface) Support +# +CONFIG_EFI_ESRT=y +CONFIG_EFI_VARS_PSTORE=m +# CONFIG_EFI_VARS_PSTORE_DEFAULT_DISABLE is not set +CONFIG_EFI_SOFT_RESERVE=y +CONFIG_EFI_PARAMS_FROM_FDT=y +CONFIG_EFI_RUNTIME_WRAPPERS=y +CONFIG_EFI_GENERIC_STUB=y +CONFIG_EFI_ARMSTUB_DTB_LOADER=y +CONFIG_EFI_GENERIC_STUB_INITRD_CMDLINE_LOADER=y +# CONFIG_EFI_BOOTLOADER_CONTROL is not set +# CONFIG_EFI_CAPSULE_LOADER is not set +# CONFIG_EFI_TEST is not set +# CONFIG_RESET_ATTACK_MITIGATION is not set +# CONFIG_EFI_DISABLE_PCI_DMA is not set +# end of EFI (Extensible Firmware Interface) Support + +CONFIG_EFI_EARLYCON=y +CONFIG_EFI_CUSTOM_SSDT_OVERLAYS=y +# CONFIG_IMX_DSP is not set +CONFIG_IMX_SCU=y +CONFIG_IMX_SCU_PD=y +CONFIG_MESON_SM=y +CONFIG_ARM_PSCI_FW=y +# CONFIG_ARM_PSCI_CHECKER is not set +CONFIG_HAVE_ARM_SMCCC=y +CONFIG_HAVE_ARM_SMCCC_DISCOVERY=y +CONFIG_ARM_SMCCC_SOC_ID=y + +# +# Tegra firmware driver +# +CONFIG_TEGRA_IVC=y +CONFIG_TEGRA_BPMP=y +# end of Tegra firmware driver +# end of Firmware Drivers + CONFIG_GNSS=m CONFIG_GNSS_SERIAL=m CONFIG_GNSS_MTK_SERIAL=m @@ -2219,6 +2255,10 @@ CONFIG_MTD_OF_PARTS_LINKSYS_NS=y CONFIG_MTD_BLKDEVS=m CONFIG_MTD_BLOCK=m CONFIG_MTD_BLOCK_RO=m + +# +# Note that in some cases UBI block is preferred. See MTD_UBI_BLOCK. +# # CONFIG_FTL is not set # CONFIG_NFTL is not set # CONFIG_INFTL is not set @@ -2448,6 +2488,7 @@ CONFIG_TIFM_CORE=m CONFIG_TIFM_7XX1=m CONFIG_ICS932S401=m CONFIG_ENCLOSURE_SERVICES=m +CONFIG_HI6421V600_IRQ=m # CONFIG_HP_ILO is not set CONFIG_QCOM_COINCELL=m # CONFIG_QCOM_FASTRPC is not set @@ -2512,6 +2553,7 @@ CONFIG_PVPANIC_PCI=m # CONFIG_SCSI_MOD=m CONFIG_RAID_ATTRS=m +CONFIG_SCSI_COMMON=m CONFIG_SCSI=m CONFIG_SCSI_DMA=y CONFIG_SCSI_NETLINK=y @@ -2524,6 +2566,7 @@ CONFIG_BLK_DEV_SD=m CONFIG_CHR_DEV_ST=m CONFIG_BLK_DEV_SR=m CONFIG_CHR_DEV_SG=m +CONFIG_BLK_DEV_BSG=y CONFIG_CHR_DEV_SCH=m CONFIG_SCSI_ENCLOSURE=m CONFIG_SCSI_CONSTANTS=y @@ -2596,10 +2639,12 @@ CONFIG_SCSI_UFSHCD_PCI=m # CONFIG_SCSI_UFSHCD_PLATFORM is not set # CONFIG_SCSI_UFS_BSG is not set CONFIG_SCSI_UFS_CRYPTO=y +CONFIG_SCSI_UFS_HPB=y CONFIG_SCSI_HPTIOP=m # CONFIG_SCSI_MYRB is not set # CONFIG_SCSI_MYRS is not set CONFIG_XEN_SCSI_FRONTEND=m +CONFIG_HYPERV_STORAGE=m CONFIG_LIBFC=m CONFIG_LIBFCOE=m CONFIG_FCOE=m @@ -3071,6 +3116,8 @@ CONFIG_I40E_DCB=y # CONFIG_IGC is not set CONFIG_NET_VENDOR_MICROSOFT=y CONFIG_JME=m +CONFIG_NET_VENDOR_LITEX=y +CONFIG_LITEX_LITEETH=m CONFIG_NET_VENDOR_MARVELL=y CONFIG_MVMDIO=m CONFIG_MVNETA=m @@ -3284,6 +3331,7 @@ CONFIG_LSI_ET1011C_PHY=m CONFIG_MARVELL_PHY=m CONFIG_MARVELL_10G_PHY=m CONFIG_MARVELL_88X2222_PHY=m +CONFIG_MAXLINEAR_GPHY=m CONFIG_MEDIATEK_GE_PHY=m CONFIG_MICREL_PHY=m CONFIG_MICROCHIP_PHY=m @@ -3309,6 +3357,10 @@ CONFIG_DP83869_PHY=m CONFIG_VITESSE_PHY=m # CONFIG_XILINX_GMII2RGMII is not set # CONFIG_MICREL_KS8995MA is not set + +# +# MCTP Device Drivers +# CONFIG_MDIO_DEVICE=m CONFIG_MDIO_BUS=m CONFIG_FWNODE_MDIO=m @@ -3558,7 +3610,6 @@ CONFIG_P54_USB=m CONFIG_P54_PCI=m # CONFIG_P54_SPI is not set CONFIG_P54_LEDS=y -# CONFIG_PRISM54 is not set CONFIG_WLAN_VENDOR_MARVELL=y CONFIG_LIBERTAS=m CONFIG_LIBERTAS_USB=m @@ -3698,6 +3749,7 @@ CONFIG_IEEE802154_MCR20A=m CONFIG_WWAN=y # CONFIG_WWAN_HWSIM is not set CONFIG_MHI_WWAN_CTRL=m +CONFIG_MHI_WWAN_MBIM=m CONFIG_RPMSG_WWAN_CTRL=m # end of Wireless WAN @@ -3706,10 +3758,10 @@ CONFIG_XEN_NETDEV_BACKEND=m # CONFIG_VMXNET3 is not set # CONFIG_FUJITSU_ES is not set CONFIG_USB4_NET=m +CONFIG_HYPERV_NET=m # CONFIG_NETDEVSIM is not set CONFIG_NET_FAILOVER=m # CONFIG_ISDN is not set -# CONFIG_NVM is not set # # Input device support @@ -3871,6 +3923,7 @@ CONFIG_SERIO_ALTERA_PS2=m # CONFIG_SERIO_PS2MULT is not set # CONFIG_SERIO_ARC_PS2 is not set # CONFIG_SERIO_APBPS2 is not set +CONFIG_HYPERV_KEYBOARD=m # CONFIG_SERIO_SUN4I_PS2 is not set # CONFIG_SERIO_GPIO_PS2 is not set # CONFIG_USERIO is not set @@ -4007,6 +4060,7 @@ CONFIG_HW_RANDOM_CAVIUM=m CONFIG_HW_RANDOM_OPTEE=m CONFIG_HW_RANDOM_CCTRNG=m CONFIG_HW_RANDOM_XIPHERA=m +CONFIG_HW_RANDOM_ARM_SMCCC_TRNG=m # CONFIG_APPLICOM is not set CONFIG_DEVMEM=y CONFIG_DEVPORT=y @@ -4014,10 +4068,9 @@ CONFIG_DEVPORT=y CONFIG_XILLYBUS_CLASS=m # CONFIG_XILLYBUS is not set CONFIG_XILLYUSB=m -# end of Character devices - # CONFIG_RANDOM_TRUST_CPU is not set # CONFIG_RANDOM_TRUST_BOOTLOADER is not set +# end of Character devices # # I2C support @@ -4132,6 +4185,7 @@ CONFIG_I2C_VIPERBOARD=m # CONFIG_I2C_CROS_EC_TUNNEL=m CONFIG_I2C_XGENE_SLIMPRO=m +CONFIG_I2C_VIRTIO=m # end of I2C Hardware Bus support # CONFIG_I2C_STUB is not set @@ -4182,6 +4236,7 @@ CONFIG_SPI_MESON_SPIFC=m # CONFIG_SPI_PL022 is not set # CONFIG_SPI_PXA2XX is not set CONFIG_SPI_ROCKCHIP=m +CONFIG_SPI_ROCKCHIP_SFC=m # CONFIG_SPI_QCOM_QSPI is not set CONFIG_SPI_QUP=m # CONFIG_SPI_QCOM_GENI is not set @@ -4238,6 +4293,7 @@ CONFIG_PPS_CLIENT_PARPORT=m # PTP clock support # CONFIG_PTP_1588_CLOCK=y +CONFIG_PTP_1588_CLOCK_OPTIONAL=y CONFIG_PTP_1588_CLOCK_QORIQ=m # @@ -4268,6 +4324,7 @@ CONFIG_PINCTRL_MAX77620=y # CONFIG_PINCTRL_RK805 is not set # CONFIG_PINCTRL_OCELOT is not set # CONFIG_PINCTRL_MICROCHIP_SGPIO is not set +CONFIG_PINCTRL_KEEMBAY=m CONFIG_PINCTRL_BCM2835=y CONFIG_PINCTRL_IMX=y CONFIG_PINCTRL_IMX_SCU=y @@ -4278,6 +4335,7 @@ CONFIG_PINCTRL_IMX8MQ=y CONFIG_PINCTRL_IMX8QM=y CONFIG_PINCTRL_IMX8QXP=y CONFIG_PINCTRL_IMX8DXL=y +CONFIG_PINCTRL_IMX8ULP=y CONFIG_PINCTRL_MVEBU=y CONFIG_PINCTRL_ARMADA_AP806=y CONFIG_PINCTRL_ARMADA_CP110=y @@ -4292,6 +4350,7 @@ CONFIG_PINCTRL_MSM=y CONFIG_PINCTRL_MSM8226=m # CONFIG_PINCTRL_MSM8660 is not set # CONFIG_PINCTRL_MSM8960 is not set +# CONFIG_PINCTRL_MDM9607 is not set # CONFIG_PINCTRL_MDM9615 is not set # CONFIG_PINCTRL_MSM8X74 is not set CONFIG_PINCTRL_MSM8916=y @@ -4310,6 +4369,7 @@ CONFIG_PINCTRL_QCOM_SSBI_PMIC=y # CONFIG_PINCTRL_SDM660 is not set # CONFIG_PINCTRL_SDM845 is not set # CONFIG_PINCTRL_SDX55 is not set +# CONFIG_PINCTRL_SM6115 is not set # CONFIG_PINCTRL_SM6125 is not set CONFIG_PINCTRL_SM8150=m CONFIG_PINCTRL_SM8250=m @@ -4392,6 +4452,7 @@ CONFIG_GPIO_MB86S7X=m CONFIG_GPIO_MVEBU=y CONFIG_GPIO_MXC=y CONFIG_GPIO_PL061=y +CONFIG_GPIO_ROCKCHIP=y # CONFIG_GPIO_SAMA5D2_PIOBU is not set CONFIG_GPIO_SIFIVE=y # CONFIG_GPIO_SYSCON is not set @@ -4463,6 +4524,7 @@ CONFIG_GPIO_VIPERBOARD=m # CONFIG_GPIO_AGGREGATOR=m # CONFIG_GPIO_MOCKUP is not set +CONFIG_GPIO_VIRTIO=m # end of Virtual GPIO drivers CONFIG_W1=m @@ -4544,7 +4606,6 @@ CONFIG_BATTERY_BQ27XXX_HDQ=m CONFIG_CHARGER_AXP20X=m CONFIG_BATTERY_AXP20X=m CONFIG_AXP20X_POWER=m -CONFIG_AXP288_FUEL_GAUGE=m # CONFIG_BATTERY_MAX17040 is not set # CONFIG_BATTERY_MAX17042 is not set # CONFIG_BATTERY_MAX1721X is not set @@ -4556,6 +4617,7 @@ CONFIG_CHARGER_GPIO=m # CONFIG_CHARGER_LT3651 is not set # CONFIG_CHARGER_LTC4162L is not set # CONFIG_CHARGER_DETECTOR_MAX14656 is not set +# CONFIG_CHARGER_MT6360 is not set CONFIG_CHARGER_QCOM_SMBB=m # CONFIG_CHARGER_BQ2415X is not set # CONFIG_CHARGER_BQ24190 is not set @@ -4571,6 +4633,7 @@ CONFIG_BATTERY_GOLDFISH=m CONFIG_BATTERY_RT5033=m # CONFIG_CHARGER_RT9455 is not set CONFIG_CHARGER_CROS_USBPD=m +CONFIG_CHARGER_CROS_PCHG=m # CONFIG_CHARGER_UCS1002 is not set CONFIG_CHARGER_BD99954=m CONFIG_HWMON=y @@ -4597,6 +4660,7 @@ CONFIG_SENSORS_ADT7462=m CONFIG_SENSORS_ADT7470=m CONFIG_SENSORS_ADT7475=m CONFIG_SENSORS_AHT10=m +CONFIG_SENSORS_AQUACOMPUTER_D5NEXT=m # CONFIG_SENSORS_AS370 is not set CONFIG_SENSORS_ASC7621=m CONFIG_SENSORS_AXI_FAN_CONTROL=m @@ -4688,6 +4752,7 @@ CONFIG_SENSORS_NZXT_KRAKEN2=m # CONFIG_SENSORS_PWM_FAN is not set CONFIG_SENSORS_RASPBERRYPI_HWMON=m CONFIG_SENSORS_SBTSI=m +CONFIG_SENSORS_SBRMI=m # CONFIG_SENSORS_SHT15 is not set CONFIG_SENSORS_SHT21=m # CONFIG_SENSORS_SHT3x is not set @@ -4795,6 +4860,7 @@ CONFIG_TEGRA_SOCTHERM=y CONFIG_QCOM_TSENS=m CONFIG_QCOM_SPMI_ADC_TM5=m CONFIG_QCOM_SPMI_TEMP_ALARM=m +CONFIG_QCOM_LMH=m # end of Qualcomm thermal drivers CONFIG_KHADAS_MCU_FAN_THERMAL=m @@ -4815,7 +4881,6 @@ CONFIG_WATCHDOG_HRTIMER_PRETIMEOUT=y # Watchdog Device Drivers # CONFIG_SOFT_WATCHDOG=m -CONFIG_BD70528_WATCHDOG=m CONFIG_BD957XMUF_WATCHDOG=m CONFIG_GPIO_WATCHDOG=m # CONFIG_WDAT_WDT is not set @@ -4921,6 +4986,7 @@ CONFIG_MFD_MADERA_SPI=m # CONFIG_MFD_MC13XXX_I2C is not set CONFIG_MFD_MP2629=m # CONFIG_MFD_HI6421_PMIC is not set +CONFIG_MFD_HI6421_SPMI=m CONFIG_MFD_HI655X_PMIC=m # CONFIG_HTC_PASIC3 is not set # CONFIG_HTC_I2CPLD is not set @@ -5015,6 +5081,8 @@ CONFIG_MFD_QCOM_PM8008=m CONFIG_MFD_VEXPRESS_SYSREG=y # CONFIG_RAVE_SP_CORE is not set # CONFIG_MFD_INTEL_M10_BMC is not set +CONFIG_MFD_RSMU_I2C=m +CONFIG_MFD_RSMU_SPI=m # end of Multifunction device drivers CONFIG_REGULATOR=y @@ -5086,7 +5154,9 @@ CONFIG_REGULATOR_RT4801=m CONFIG_REGULATOR_RT4831=m CONFIG_REGULATOR_RT6160=m CONFIG_REGULATOR_RT6245=m +CONFIG_REGULATOR_RTQ2134=m CONFIG_REGULATOR_RTMV20=m +CONFIG_REGULATOR_RTQ6752=m CONFIG_REGULATOR_SLG51000=m CONFIG_REGULATOR_SY8106A=m CONFIG_REGULATOR_SY8824X=m @@ -5127,6 +5197,7 @@ CONFIG_IR_MCEUSB=m # CONFIG_IR_ITE_CIR is not set # CONFIG_IR_FINTEK is not set # CONFIG_IR_MESON is not set +# CONFIG_IR_MESON_TX is not set # CONFIG_IR_NUVOTON is not set CONFIG_IR_REDRAT3=m # CONFIG_IR_SPI is not set @@ -5662,7 +5733,9 @@ CONFIG_VIDEO_IMX274=m CONFIG_VIDEO_IMX290=m CONFIG_VIDEO_IMX319=m CONFIG_VIDEO_IMX334=m +CONFIG_VIDEO_IMX335=m CONFIG_VIDEO_IMX355=m +CONFIG_VIDEO_IMX412=m CONFIG_VIDEO_OV02A10=m CONFIG_VIDEO_OV2640=m CONFIG_VIDEO_OV2659=m @@ -5684,6 +5757,7 @@ CONFIG_VIDEO_OV7670=m CONFIG_VIDEO_OV7740=m CONFIG_VIDEO_OV8856=m CONFIG_VIDEO_OV8865=m +CONFIG_VIDEO_OV9282=m CONFIG_VIDEO_OV9640=m CONFIG_VIDEO_OV9650=m CONFIG_VIDEO_OV9734=m @@ -5969,6 +6043,7 @@ CONFIG_TEGRA_HOST1X_FIREWALL=y CONFIG_DRM=m CONFIG_DRM_MIPI_DBI=m CONFIG_DRM_MIPI_DSI=y +CONFIG_DRM_DP_AUX_BUS=m CONFIG_DRM_DP_AUX_CHARDEV=y # CONFIG_DRM_DEBUG_SELFTEST is not set CONFIG_DRM_KMS_HELPER=m @@ -6055,7 +6130,6 @@ CONFIG_DRM_AST=m # CONFIG_DRM_RCAR_LVDS is not set # CONFIG_DRM_SUN4I is not set CONFIG_DRM_QXL=m -CONFIG_DRM_BOCHS=m CONFIG_DRM_VIRTIO_GPU=m CONFIG_DRM_MSM=m CONFIG_DRM_MSM_GPU_STATE=y @@ -6090,7 +6164,9 @@ CONFIG_DRM_PANEL_ELIDA_KD35T133=m CONFIG_DRM_PANEL_FEIXIN_K101_IM2BA02=m # CONFIG_DRM_PANEL_FEIYANG_FY07024DI26A30D is not set # CONFIG_DRM_PANEL_ILITEK_IL9322 is not set +# CONFIG_DRM_PANEL_ILITEK_ILI9341 is not set # CONFIG_DRM_PANEL_ILITEK_ILI9881C is not set +# CONFIG_DRM_PANEL_INNOLUX_EJ030NA is not set # CONFIG_DRM_PANEL_INNOLUX_P079ZCA is not set # CONFIG_DRM_PANEL_JDI_LT070ME05000 is not set CONFIG_DRM_PANEL_KHADAS_TS050=m @@ -6113,6 +6189,8 @@ CONFIG_DRM_PANEL_OSD_OSD101T2587_53TS=m # CONFIG_DRM_PANEL_RAYDIUM_RM67191 is not set # CONFIG_DRM_PANEL_RAYDIUM_RM68200 is not set # CONFIG_DRM_PANEL_RONBO_RB070D30 is not set +# CONFIG_DRM_PANEL_SAMSUNG_ATNA33XC20 is not set +# CONFIG_DRM_PANEL_SAMSUNG_DB7430 is not set # CONFIG_DRM_PANEL_SAMSUNG_S6D16D0 is not set # CONFIG_DRM_PANEL_SAMSUNG_S6E3HA2 is not set # CONFIG_DRM_PANEL_SAMSUNG_S6E63J0X03 is not set @@ -6135,6 +6213,7 @@ CONFIG_DRM_PANEL_SONY_ACX424AKP=m # CONFIG_DRM_PANEL_TPO_TPG110 is not set # CONFIG_DRM_PANEL_TRULY_NT35597_WQXGA is not set # CONFIG_DRM_PANEL_VISIONOX_RM69299 is not set +# CONFIG_DRM_PANEL_WIDECHIPS_WS2401 is not set CONFIG_DRM_PANEL_XINPENG_XPP055C272=m # end of Display Panels @@ -6199,6 +6278,7 @@ CONFIG_DRM_HISI_KIRIN=m CONFIG_DRM_MESON=m CONFIG_DRM_MESON_DW_HDMI=m # CONFIG_DRM_ARCPGU is not set +CONFIG_DRM_BOCHS=m CONFIG_DRM_CIRRUS_QEMU=m CONFIG_DRM_GM12U320=m CONFIG_DRM_SIMPLEDRM=m @@ -6217,6 +6297,7 @@ CONFIG_DRM_LIMA=m CONFIG_DRM_PANFROST=m CONFIG_DRM_TIDSS=m CONFIG_DRM_GUD=m +CONFIG_DRM_HYPERV=m CONFIG_DRM_LEGACY=y # CONFIG_DRM_TDFX is not set # CONFIG_DRM_R128 is not set @@ -6292,7 +6373,8 @@ CONFIG_FB_MB862XX=m CONFIG_FB_MB862XX_PCI_GDC=y CONFIG_FB_MB862XX_I2C=y # CONFIG_FB_MX3 is not set -CONFIG_FB_SIMPLE=y +CONFIG_FB_HYPERV=m +CONFIG_FB_SIMPLE=m # CONFIG_FB_SSD1307 is not set # CONFIG_FB_SM712 is not set # end of Frame buffer Devices @@ -6489,6 +6571,7 @@ CONFIG_SND_HDA_CODEC_SIGMATEL=m CONFIG_SND_HDA_CODEC_VIA=m CONFIG_SND_HDA_CODEC_HDMI=m CONFIG_SND_HDA_CODEC_CIRRUS=m +CONFIG_SND_HDA_CODEC_CS8409=m CONFIG_SND_HDA_CODEC_CONEXANT=m CONFIG_SND_HDA_CODEC_CA0110=m CONFIG_SND_HDA_CODEC_CA0132=m @@ -6744,6 +6827,7 @@ CONFIG_SND_SOC_ES8328=m CONFIG_SND_SOC_ES8328_I2C=m CONFIG_SND_SOC_ES8328_SPI=m # CONFIG_SND_SOC_GTM601 is not set +CONFIG_SND_SOC_ICS43432=m # CONFIG_SND_SOC_INNO_RK3036 is not set # CONFIG_SND_SOC_MAX98088 is not set CONFIG_SND_SOC_MAX98090=m @@ -6978,6 +7062,7 @@ CONFIG_HID_SUNPLUS=m CONFIG_HID_RMI=m CONFIG_HID_GREENASIA=m CONFIG_GREENASIA_FF=y +CONFIG_HID_HYPERV_MOUSE=m CONFIG_HID_SMARTJOYPLUS=m CONFIG_SMARTJOYPLUS_FF=y CONFIG_HID_TIVO=m @@ -7035,7 +7120,7 @@ CONFIG_SURFACE_HID_CORE=m CONFIG_USB_OHCI_LITTLE_ENDIAN=y CONFIG_USB_SUPPORT=y -CONFIG_USB_COMMON=y +CONFIG_USB_COMMON=m CONFIG_USB_LED_TRIG=y CONFIG_USB_ULPI_BUS=m CONFIG_USB_CONN_GPIO=m @@ -7871,6 +7956,7 @@ CONFIG_SYNC_FILE=y # CONFIG_DMABUF_DEBUG is not set # CONFIG_DMABUF_SELFTESTS is not set # CONFIG_DMABUF_HEAPS is not set +# CONFIG_DMABUF_SYSFS_STATS is not set # end of DMABUF options # CONFIG_AUXDISPLAY is not set @@ -7885,13 +7971,15 @@ CONFIG_UIO_PCI_GENERIC=m CONFIG_UIO_NETX=m # CONFIG_UIO_PRUSS is not set CONFIG_UIO_MF624=m +CONFIG_UIO_HV_GENERIC=m +CONFIG_VFIO=m CONFIG_VFIO_IOMMU_TYPE1=m CONFIG_VFIO_VIRQFD=m -CONFIG_VFIO=m CONFIG_VFIO_NOIOMMU=y -CONFIG_VFIO_PCI=m +CONFIG_VFIO_PCI_CORE=m CONFIG_VFIO_PCI_MMAP=y CONFIG_VFIO_PCI_INTX=y +CONFIG_VFIO_PCI=m # CONFIG_VFIO_PLATFORM is not set # CONFIG_VFIO_MDEV is not set CONFIG_VIRT_DRIVERS=y @@ -7909,11 +7997,13 @@ CONFIG_VIRTIO_MMIO=m CONFIG_VIRTIO_DMA_SHARED_BUFFER=m CONFIG_VDPA=m # CONFIG_VDPA_SIM is not set +CONFIG_VDPA_USER=m CONFIG_IFCVF=m CONFIG_MLX5_VDPA=y CONFIG_MLX5_VDPA_NET=m CONFIG_VP_VDPA=m CONFIG_VHOST_IOTLB=m +CONFIG_VHOST_RING=m CONFIG_VHOST=m CONFIG_VHOST_MENU=y CONFIG_VHOST_NET=m @@ -7925,6 +8015,9 @@ CONFIG_VHOST_VDPA=m # # Microsoft Hyper-V guest support # +CONFIG_HYPERV=m +CONFIG_HYPERV_UTILS=m +CONFIG_HYPERV_BALLOON=m # end of Microsoft Hyper-V guest support # @@ -8035,6 +8128,7 @@ CONFIG_88EU_AP_MODE=y # CONFIG_FIREWIRE_SERIAL is not set # CONFIG_GS_FPGABOOT is not set # CONFIG_UNISYSSPAR is not set +CONFIG_COMMON_CLK_XLNX_CLKWZRD=m # CONFIG_FB_TFT is not set # CONFIG_KS7010 is not set CONFIG_BCM_VIDEOCORE=y @@ -8046,7 +8140,6 @@ CONFIG_BCM_VIDEOCORE=y # CONFIG_FIELDBUS_DEV is not set CONFIG_QLGE=m CONFIG_WFX=m -CONFIG_MFD_HI6421_SPMI=m # CONFIG_GOLDFISH is not set CONFIG_CHROME_PLATFORMS=y CONFIG_CHROMEOS_TBMC=m @@ -8184,8 +8277,10 @@ CONFIG_MDM_GCC_9607=m # CONFIG_MDM_GCC_9615 is not set # CONFIG_MDM_LCC_9615 is not set # CONFIG_MSM_MMCC_8960 is not set +# CONFIG_MSM_GCC_8953 is not set # CONFIG_MSM_GCC_8974 is not set # CONFIG_MSM_MMCC_8974 is not set +# CONFIG_MSM_MMCC_8994 is not set # CONFIG_MSM_GCC_8994 is not set CONFIG_MSM_GCC_8996=y CONFIG_MSM_MMCC_8996=y @@ -8195,13 +8290,16 @@ CONFIG_MSM_MMCC_8996=y # CONFIG_QCS_GCC_404 is not set # CONFIG_SC_CAMCC_7180 is not set # CONFIG_SC_DISPCC_7180 is not set +# CONFIG_SC_DISPCC_7280 is not set CONFIG_SC_GCC_7180=m CONFIG_SC_GCC_7280=m CONFIG_SC_GCC_8180X=m CONFIG_SC_LPASS_CORECC_7180=m # CONFIG_SC_GPUCC_7180 is not set +# CONFIG_SC_GPUCC_7280 is not set # CONFIG_SC_MSS_7180 is not set # CONFIG_SC_VIDEOCC_7180 is not set +# CONFIG_SC_VIDEOCC_7280 is not set # CONFIG_SDM_CAMCC_845 is not set CONFIG_SDM_GCC_660=m CONFIG_SDM_MMCC_660=m @@ -8216,7 +8314,9 @@ CONFIG_SDM_LPASSCC_845=m CONFIG_SDX_GCC_55=m CONFIG_SM_CAMCC_8250=m CONFIG_SM_DISPCC_8250=m +# CONFIG_SM_GCC_6115 is not set CONFIG_SM_GCC_6125=m +# CONFIG_SM_GCC_6350 is not set # CONFIG_SM_GCC_8150 is not set CONFIG_SM_GCC_8250=m CONFIG_SM_GCC_8350=m @@ -8314,6 +8414,8 @@ CONFIG_IOMMU_IO_PGTABLE_LPAE=y # end of Generic IOMMU Pagetable Support # CONFIG_IOMMU_DEBUGFS is not set +# CONFIG_IOMMU_DEFAULT_DMA_STRICT is not set +CONFIG_IOMMU_DEFAULT_DMA_LAZY=y # CONFIG_IOMMU_DEFAULT_PASSTHROUGH is not set CONFIG_OF_IOMMU=y CONFIG_IOMMU_DMA=y @@ -8321,9 +8423,11 @@ CONFIG_IOMMU_SVA_LIB=y CONFIG_ROCKCHIP_IOMMU=y CONFIG_SUN50I_IOMMU=y CONFIG_TEGRA_IOMMU_SMMU=y +CONFIG_APPLE_DART=y CONFIG_ARM_SMMU=y # CONFIG_ARM_SMMU_LEGACY_DT_BINDINGS is not set CONFIG_ARM_SMMU_DISABLE_BYPASS_BY_DEFAULT=y +CONFIG_ARM_SMMU_QCOM=y CONFIG_ARM_SMMU_V3=y CONFIG_ARM_SMMU_V3_SVA=y CONFIG_QCOM_IOMMU=y @@ -8642,6 +8746,7 @@ CONFIG_SCD30_CORE=m CONFIG_SCD30_I2C=m CONFIG_SCD30_SERIAL=m # CONFIG_SENSIRION_SGP30 is not set +# CONFIG_SENSIRION_SGP40 is not set # CONFIG_SPS30_I2C is not set # CONFIG_SPS30_SERIAL is not set # CONFIG_VZ89X is not set @@ -8901,6 +9006,7 @@ CONFIG_HID_SENSOR_CUSTOM_INTEL_HINGE=m # # Digital potentiometers # +CONFIG_AD5110=m # CONFIG_AD5272 is not set # CONFIG_DS1803 is not set # CONFIG_MAX5432 is not set @@ -9299,12 +9405,12 @@ CONFIG_F2FS_FS_SECURITY=y # CONFIG_F2FS_CHECK_FS is not set # CONFIG_F2FS_FAULT_INJECTION is not set # CONFIG_F2FS_FS_COMPRESSION is not set +# CONFIG_F2FS_IOSTAT is not set CONFIG_FS_DAX=y CONFIG_FS_POSIX_ACL=y CONFIG_EXPORTFS=y CONFIG_EXPORTFS_BLOCK_OPS=y CONFIG_FILE_LOCKING=y -CONFIG_MANDATORY_FILE_LOCKING=y # CONFIG_FS_ENCRYPTION is not set CONFIG_FS_VERITY=y # CONFIG_FS_VERITY_DEBUG is not set @@ -9339,15 +9445,12 @@ CONFIG_OVERLAY_FS_REDIRECT_ALWAYS_FOLLOW=y # Caches # CONFIG_NETFS_SUPPORT=m -# CONFIG_NETFS_STATS is not set +CONFIG_NETFS_STATS=y CONFIG_FSCACHE=m CONFIG_FSCACHE_STATS=y -# CONFIG_FSCACHE_HISTOGRAM is not set # CONFIG_FSCACHE_DEBUG is not set -# CONFIG_FSCACHE_OBJECT_LIST is not set CONFIG_CACHEFILES=m # CONFIG_CACHEFILES_DEBUG is not set -# CONFIG_CACHEFILES_HISTOGRAM is not set # end of Caches # @@ -9373,6 +9476,10 @@ CONFIG_EXFAT_DEFAULT_IOCHARSET="utf8" CONFIG_NTFS_FS=m # CONFIG_NTFS_DEBUG is not set # CONFIG_NTFS_RW is not set +CONFIG_NTFS3_FS=m +# CONFIG_NTFS3_64BIT_CLUSTER is not set +CONFIG_NTFS3_LZX_XPRESS=y +# CONFIG_NTFS3_FS_POSIX_ACL is not set # end of DOS/FAT/EXFAT/NT Filesystems # @@ -9483,6 +9590,7 @@ CONFIG_PSTORE_COMPRESS_DEFAULT="deflate" # CONFIG_PSTORE_PMSG is not set # CONFIG_PSTORE_FTRACE is not set CONFIG_PSTORE_RAM=m +# CONFIG_PSTORE_BLK is not set CONFIG_SYSV_FS=m CONFIG_UFS_FS=m # CONFIG_UFS_FS_WRITE is not set @@ -9546,7 +9654,6 @@ CONFIG_CEPH_FS_SECURITY_LABEL=y CONFIG_CIFS=m # CONFIG_CIFS_STATS2 is not set CONFIG_CIFS_ALLOW_INSECURE_LEGACY=y -CONFIG_CIFS_WEAK_PW_HASH=y CONFIG_CIFS_UPCALL=y CONFIG_CIFS_XATTR=y CONFIG_CIFS_POSIX=y @@ -9557,6 +9664,8 @@ CONFIG_CIFS_DFS_UPCALL=y CONFIG_CIFS_SWN_UPCALL=y # CONFIG_CIFS_SMB_DIRECT is not set CONFIG_CIFS_FSCACHE=y +# CONFIG_SMB_SERVER is not set +CONFIG_SMBFS_COMMON=m CONFIG_CODA_FS=m CONFIG_AFS_FS=m # CONFIG_AFS_DEBUG is not set @@ -9688,13 +9797,24 @@ CONFIG_LSM="yama,loadpin,safesetid,integrity,apparmor,selinux,smack,tomoyo" # # Kernel hardening options # +CONFIG_GCC_PLUGIN_STRUCTLEAK=y # # Memory initialization # -CONFIG_INIT_STACK_NONE=y +# CONFIG_INIT_STACK_NONE is not set +# CONFIG_GCC_PLUGIN_STRUCTLEAK_USER is not set +# CONFIG_GCC_PLUGIN_STRUCTLEAK_BYREF is not set +CONFIG_GCC_PLUGIN_STRUCTLEAK_BYREF_ALL=y +# CONFIG_GCC_PLUGIN_STRUCTLEAK_VERBOSE is not set +CONFIG_GCC_PLUGIN_STACKLEAK=y +CONFIG_STACKLEAK_TRACK_MIN_SIZE=100 +# CONFIG_STACKLEAK_METRICS is not set +CONFIG_STACKLEAK_RUNTIME_DISABLE=y CONFIG_INIT_ON_ALLOC_DEFAULT_ON=y # CONFIG_INIT_ON_FREE_DEFAULT_ON is not set +CONFIG_CC_HAS_ZERO_CALL_USED_REGS=y +# CONFIG_ZERO_CALL_USED_REGS is not set # end of Memory initialization # end of Kernel hardening options # end of Security options @@ -9885,6 +10005,7 @@ CONFIG_CRYPTO_LIB_POLY1305_GENERIC=m CONFIG_CRYPTO_LIB_POLY1305=m CONFIG_CRYPTO_LIB_CHACHA20POLY1305=m CONFIG_CRYPTO_LIB_SHA256=y +CONFIG_CRYPTO_LIB_SM4=m CONFIG_CRYPTO_HW=y CONFIG_CRYPTO_DEV_ALLWINNER=y CONFIG_CRYPTO_DEV_SUN4I_SS=m @@ -10065,6 +10186,7 @@ CONFIG_ARCH_HAS_SYNC_DMA_FOR_DEVICE=y CONFIG_ARCH_HAS_SYNC_DMA_FOR_CPU=y CONFIG_ARCH_HAS_DMA_PREP_COHERENT=y CONFIG_SWIOTLB=y +CONFIG_DMA_RESTRICTED_POOL=y CONFIG_DMA_NONCOHERENT_MMAP=y CONFIG_DMA_COHERENT_POOL=y CONFIG_DMA_REMAP=y @@ -10188,6 +10310,7 @@ CONFIG_HAVE_ARCH_KGDB=y # CONFIG_KGDB is not set CONFIG_ARCH_HAS_UBSAN_SANITIZE_ALL=y # CONFIG_UBSAN is not set +CONFIG_HAVE_KCSAN_COMPILER=y # end of Generic Kernel Debugging Instruments CONFIG_DEBUG_KERNEL=y @@ -10228,9 +10351,9 @@ CONFIG_CC_HAS_WORKING_NOSANITIZE_ADDRESS=y # CONFIG_KASAN is not set CONFIG_HAVE_ARCH_KFENCE=y CONFIG_KFENCE=y -CONFIG_KFENCE_STATIC_KEYS=y CONFIG_KFENCE_SAMPLE_INTERVAL=0 CONFIG_KFENCE_NUM_OBJECTS=255 +CONFIG_KFENCE_STATIC_KEYS=y CONFIG_KFENCE_STRESS_TEST_FAULTS=0 # end of Memory Debugging @@ -10313,7 +10436,6 @@ CONFIG_RCU_CPU_STALL_TIMEOUT=21 # end of RCU Debugging # CONFIG_DEBUG_WQ_FORCE_RR_CPU is not set -# CONFIG_DEBUG_BLOCK_EXT_DEVT is not set # CONFIG_CPU_HOTPLUG_STATE_CONTROL is not set # CONFIG_LATENCYTOP is not set CONFIG_NOP_TRACER=y @@ -10402,7 +10524,6 @@ CONFIG_CC_HAS_SANCOV_TRACE_PC=y CONFIG_RUNTIME_TESTING_MENU=y # CONFIG_LKDTM is not set # CONFIG_TEST_MIN_HEAP is not set -# CONFIG_TEST_SORT is not set # CONFIG_TEST_DIV64 is not set # CONFIG_KPROBES_SANITY_TEST is not set # CONFIG_BACKTRACE_SELF_TEST is not set @@ -10444,5 +10565,6 @@ CONFIG_TEST_STATIC_KEYS=m # CONFIG_TEST_FREE_PAGES is not set CONFIG_ARCH_USE_MEMTEST=y # CONFIG_MEMTEST is not set +# CONFIG_HYPERV_TESTING is not set # end of Kernel Testing and Coverage # end of Kernel hacking diff --git a/gnu/packages/aux-files/linux-libre/5.14-i686.conf b/gnu/packages/aux-files/linux-libre/5.15-i686.conf index bcca80c348..ce47c19e9f 100644 --- a/gnu/packages/aux-files/linux-libre/5.14-i686.conf +++ b/gnu/packages/aux-files/linux-libre/5.15-i686.conf @@ -1,17 +1,18 @@ # # Automatically generated file; DO NOT EDIT. -# Linux/i386 5.14.0 Kernel Configuration +# Linux/i386 5.15.5 Kernel Configuration # -CONFIG_CC_VERSION_TEXT="gcc (Debian 8.3.0-6) 8.3.0" +CONFIG_CC_VERSION_TEXT="gcc (GCC) 11.2.0" CONFIG_CC_IS_GCC=y -CONFIG_GCC_VERSION=80300 +CONFIG_GCC_VERSION=110200 CONFIG_CLANG_VERSION=0 CONFIG_AS_IS_GNU=y -CONFIG_AS_VERSION=23101 +CONFIG_AS_VERSION=23400 CONFIG_LD_IS_BFD=y -CONFIG_LD_VERSION=23101 +CONFIG_LD_VERSION=23400 CONFIG_LLD_VERSION=0 CONFIG_CC_HAS_ASM_GOTO=y +CONFIG_CC_HAS_ASM_GOTO_OUTPUT=y CONFIG_CC_HAS_ASM_INLINE=y CONFIG_CC_HAS_NO_PROFILE_FN_ATTR=y CONFIG_IRQ_WORK=y @@ -23,6 +24,7 @@ CONFIG_THREAD_INFO_IN_TASK=y # CONFIG_INIT_ENV_ARG_LIMIT=32 # CONFIG_COMPILE_TEST is not set +# CONFIG_WERROR is not set CONFIG_LOCALVERSION="" # CONFIG_LOCALVERSION_AUTO is not set CONFIG_BUILD_SALT="" @@ -152,6 +154,7 @@ CONFIG_BUILD_BIN2C=y CONFIG_LOG_BUF_SHIFT=18 CONFIG_LOG_CPU_MAX_BUF_SHIFT=12 CONFIG_PRINTK_SAFE_LOG_BUF_SHIFT=13 +# CONFIG_PRINTK_INDEX is not set CONFIG_HAVE_UNSTABLE_SCHED_CLOCK=y # @@ -221,7 +224,6 @@ CONFIG_SYSFS_SYSCALL=y CONFIG_FHANDLE=y CONFIG_POSIX_TIMERS=y CONFIG_PRINTK=y -CONFIG_PRINTK_NMI=y CONFIG_BUG=y CONFIG_ELF_CORE=y CONFIG_PCSPKR_PLATFORM=y @@ -294,6 +296,7 @@ CONFIG_HAVE_SETUP_PER_CPU_AREA=y CONFIG_NEED_PER_CPU_EMBED_FIRST_CHUNK=y CONFIG_NEED_PER_CPU_PAGE_FIRST_CHUNK=y CONFIG_ARCH_HIBERNATION_POSSIBLE=y +CONFIG_ARCH_NR_GPIO=512 CONFIG_ARCH_SUSPEND_POSSIBLE=y CONFIG_ARCH_WANT_GENERAL_HUGETLB=y CONFIG_HAVE_INTEL_TXT=y @@ -417,6 +420,7 @@ CONFIG_PERF_EVENTS_INTEL_UNCORE=y CONFIG_PERF_EVENTS_INTEL_RAPL=y CONFIG_PERF_EVENTS_INTEL_CSTATE=y CONFIG_PERF_EVENTS_AMD_POWER=m +CONFIG_PERF_EVENTS_AMD_UNCORE=m # end of Performance monitoring # CONFIG_X86_LEGACY_VM86 is not set @@ -663,7 +667,6 @@ CONFIG_ALIX=y CONFIG_NET5501=y CONFIG_GEOS=y CONFIG_AMD_NB=y -# CONFIG_X86_SYSFB is not set # end of Bus options (PCI etc.) # @@ -673,55 +676,6 @@ CONFIG_COMPAT_32=y # end of Binary Emulations CONFIG_HAVE_ATOMIC_IOMAP=y - -# -# Firmware Drivers -# -CONFIG_EDD=y -CONFIG_EDD_OFF=y -CONFIG_FIRMWARE_MEMMAP=y -CONFIG_DMIID=y -CONFIG_DMI_SYSFS=m -CONFIG_DMI_SCAN_MACHINE_NON_EFI_FALLBACK=y -CONFIG_ISCSI_IBFT_FIND=y -CONFIG_ISCSI_IBFT=m -CONFIG_FW_CFG_SYSFS=m -# CONFIG_FW_CFG_SYSFS_CMDLINE is not set -# CONFIG_GOOGLE_FIRMWARE is not set - -# -# EFI (Extensible Firmware Interface) Support -# -CONFIG_EFI_VARS=y -CONFIG_EFI_ESRT=y -CONFIG_EFI_VARS_PSTORE=m -# CONFIG_EFI_VARS_PSTORE_DEFAULT_DISABLE is not set -CONFIG_EFI_RUNTIME_MAP=y -# CONFIG_EFI_FAKE_MEMMAP is not set -CONFIG_EFI_RUNTIME_WRAPPERS=y -CONFIG_EFI_GENERIC_STUB_INITRD_CMDLINE_LOADER=y -CONFIG_EFI_BOOTLOADER_CONTROL=m -CONFIG_EFI_CAPSULE_LOADER=y -CONFIG_EFI_CAPSULE_QUIRK_QUARK_CSH=y -# CONFIG_EFI_TEST is not set -CONFIG_APPLE_PROPERTIES=y -CONFIG_RESET_ATTACK_MITIGATION=y -# CONFIG_EFI_RCI2_TABLE is not set -# CONFIG_EFI_DISABLE_PCI_DMA is not set -# end of EFI (Extensible Firmware Interface) Support - -CONFIG_UEFI_CPER=y -CONFIG_UEFI_CPER_X86=y -CONFIG_EFI_DEV_PATH_PARSER=y -CONFIG_EFI_EARLYCON=y -CONFIG_EFI_CUSTOM_SSDT_OVERLAYS=y - -# -# Tegra firmware driver -# -# end of Tegra firmware driver -# end of Firmware Drivers - CONFIG_HAVE_KVM=y CONFIG_HAVE_KVM_IRQCHIP=y CONFIG_HAVE_KVM_IRQFD=y @@ -774,6 +728,7 @@ CONFIG_HAVE_OPTPROBES=y CONFIG_HAVE_KPROBES_ON_FTRACE=y CONFIG_HAVE_FUNCTION_ERROR_INJECTION=y CONFIG_HAVE_NMI=y +CONFIG_TRACE_IRQFLAGS_SUPPORT=y CONFIG_HAVE_ARCH_TRACEHOOK=y CONFIG_HAVE_DMA_CONTIGUOUS=y CONFIG_GENERIC_SMP_IDLE_THREAD=y @@ -850,6 +805,7 @@ CONFIG_HAVE_PREEMPT_DYNAMIC=y CONFIG_ARCH_WANT_LD_ORPHAN_WARN=y CONFIG_ARCH_SUPPORTS_DEBUG_PAGEALLOC=y CONFIG_ARCH_SPLIT_ARG64=y +CONFIG_ARCH_HAS_PARANOID_L1D_FLUSH=y # # GCOV-based kernel profiling @@ -859,6 +815,10 @@ CONFIG_ARCH_HAS_GCOV_PROFILE_ALL=y # end of GCOV-based kernel profiling CONFIG_HAVE_GCC_PLUGINS=y +CONFIG_GCC_PLUGINS=y +# CONFIG_GCC_PLUGIN_CYC_COMPLEXITY is not set +CONFIG_GCC_PLUGIN_LATENT_ENTROPY=y +# CONFIG_GCC_PLUGIN_RANDSTRUCT is not set # end of General architecture-dependent options CONFIG_RT_MUTEXES=y @@ -881,16 +841,14 @@ CONFIG_MODPROBE_PATH="/run/current-system/profile/bin/modprobe" CONFIG_MODULES_TREE_LOOKUP=y CONFIG_BLOCK=y CONFIG_BLK_RQ_ALLOC_TIME=y -CONFIG_BLK_SCSI_REQUEST=y CONFIG_BLK_CGROUP_RWSTAT=y -CONFIG_BLK_DEV_BSG=y +CONFIG_BLK_DEV_BSG_COMMON=y CONFIG_BLK_DEV_BSGLIB=y CONFIG_BLK_DEV_INTEGRITY=y CONFIG_BLK_DEV_INTEGRITY_T10=y CONFIG_BLK_DEV_ZONED=y CONFIG_BLK_DEV_THROTTLING=y # CONFIG_BLK_DEV_THROTTLING_LOW is not set -CONFIG_BLK_CMDLINE_PARSER=y CONFIG_BLK_WBT=y CONFIG_BLK_WBT_MQ=y # CONFIG_BLK_CGROUP_IOLATENCY is not set @@ -933,6 +891,7 @@ CONFIG_BLK_MQ_PCI=y CONFIG_BLK_MQ_VIRTIO=y CONFIG_BLK_MQ_RDMA=y CONFIG_BLK_PM=y +CONFIG_BLOCK_HOLDER_DEPRECATED=y # # IO Schedulers @@ -1029,6 +988,7 @@ CONFIG_Z3FOLD=m CONFIG_ZSMALLOC=y # CONFIG_ZSMALLOC_STAT is not set CONFIG_GENERIC_EARLY_IOREMAP=y +CONFIG_PAGE_IDLE_FLAG=y CONFIG_IDLE_PAGE_TRACKING=y CONFIG_ARCH_HAS_CACHE_LINE_SIZE=y CONFIG_ARCH_HAS_ZONE_DMA_SET=y @@ -1043,6 +1003,14 @@ CONFIG_ARCH_HAS_PTE_SPECIAL=y CONFIG_MAPPING_DIRTY_HELPERS=y CONFIG_KMAP_LOCAL=y CONFIG_SECRETMEM=y + +# +# Data Access Monitoring +# +CONFIG_DAMON=y +CONFIG_DAMON_VADDR=y +# CONFIG_DAMON_DBGFS is not set +# end of Data Access Monitoring # end of Memory Management options CONFIG_NET=y @@ -1058,6 +1026,7 @@ CONFIG_PACKET=y CONFIG_PACKET_DIAG=m CONFIG_UNIX=y CONFIG_UNIX_SCM=y +CONFIG_AF_UNIX_OOB=y CONFIG_UNIX_DIAG=m CONFIG_TLS=m # CONFIG_TLS_DEVICE is not set @@ -1167,6 +1136,7 @@ CONFIG_IPV6_PIMSM_V2=y # CONFIG_IPV6_SEG6_LWTUNNEL is not set # CONFIG_IPV6_SEG6_HMAC is not set # CONFIG_IPV6_RPL_LWTUNNEL is not set +# CONFIG_IPV6_IOAM6_LWTUNNEL is not set CONFIG_NETLABEL=y CONFIG_MPTCP=y CONFIG_INET_MPTCP_DIAG=m @@ -1589,7 +1559,6 @@ CONFIG_BRIDGE_VLAN_FILTERING=y CONFIG_BRIDGE_MRP=y CONFIG_BRIDGE_CFM=y CONFIG_NET_DSA=m -CONFIG_NET_DSA_TAG_8021Q=m CONFIG_NET_DSA_TAG_AR9331=m CONFIG_NET_DSA_TAG_BRCM_COMMON=m CONFIG_NET_DSA_TAG_BRCM=m @@ -1965,6 +1934,7 @@ CONFIG_AF_RXRPC_IPV6=y # CONFIG_RXKAD is not set CONFIG_AF_KCM=m CONFIG_STREAM_PARSER=y +CONFIG_MCTP=m CONFIG_FIB_RULES=y CONFIG_WIRELESS=y CONFIG_WIRELESS_EXT=y @@ -2100,7 +2070,6 @@ CONFIG_PCI_QUIRKS=y CONFIG_PCI_REALLOC_ENABLE_AUTO=y CONFIG_PCI_STUB=m # CONFIG_PCI_PF_STUB is not set -CONFIG_XEN_PCIDEV_FRONTEND=m CONFIG_PCI_ATS=y CONFIG_PCI_LOCKLESS_CONFIG=y CONFIG_PCI_IOV=y @@ -2259,6 +2228,63 @@ CONFIG_MHI_BUS_PCI_GENERIC=m CONFIG_CONNECTOR=y CONFIG_PROC_EVENTS=y + +# +# Firmware Drivers +# + +# +# ARM System Control and Management Interface Protocol +# +# end of ARM System Control and Management Interface Protocol + +CONFIG_EDD=y +CONFIG_EDD_OFF=y +CONFIG_FIRMWARE_MEMMAP=y +CONFIG_DMIID=y +CONFIG_DMI_SYSFS=m +CONFIG_DMI_SCAN_MACHINE_NON_EFI_FALLBACK=y +CONFIG_ISCSI_IBFT_FIND=y +CONFIG_ISCSI_IBFT=m +CONFIG_FW_CFG_SYSFS=m +# CONFIG_FW_CFG_SYSFS_CMDLINE is not set +CONFIG_SYSFB=y +# CONFIG_SYSFB_SIMPLEFB is not set +# CONFIG_GOOGLE_FIRMWARE is not set + +# +# EFI (Extensible Firmware Interface) Support +# +CONFIG_EFI_VARS=y +CONFIG_EFI_ESRT=y +CONFIG_EFI_VARS_PSTORE=m +# CONFIG_EFI_VARS_PSTORE_DEFAULT_DISABLE is not set +CONFIG_EFI_RUNTIME_MAP=y +# CONFIG_EFI_FAKE_MEMMAP is not set +CONFIG_EFI_RUNTIME_WRAPPERS=y +CONFIG_EFI_GENERIC_STUB_INITRD_CMDLINE_LOADER=y +CONFIG_EFI_BOOTLOADER_CONTROL=m +CONFIG_EFI_CAPSULE_LOADER=y +CONFIG_EFI_CAPSULE_QUIRK_QUARK_CSH=y +# CONFIG_EFI_TEST is not set +CONFIG_APPLE_PROPERTIES=y +CONFIG_RESET_ATTACK_MITIGATION=y +# CONFIG_EFI_RCI2_TABLE is not set +# CONFIG_EFI_DISABLE_PCI_DMA is not set +# end of EFI (Extensible Firmware Interface) Support + +CONFIG_UEFI_CPER=y +CONFIG_UEFI_CPER_X86=y +CONFIG_EFI_DEV_PATH_PARSER=y +CONFIG_EFI_EARLYCON=y +CONFIG_EFI_CUSTOM_SSDT_OVERLAYS=y + +# +# Tegra firmware driver +# +# end of Tegra firmware driver +# end of Firmware Drivers + CONFIG_GNSS=m CONFIG_GNSS_SERIAL=m CONFIG_GNSS_MTK_SERIAL=m @@ -2284,6 +2310,10 @@ CONFIG_MTD_REDBOOT_DIRECTORY_BLOCK=-1 CONFIG_MTD_BLKDEVS=m CONFIG_MTD_BLOCK=m CONFIG_MTD_BLOCK_RO=m + +# +# Note that in some cases UBI block is preferred. See MTD_UBI_BLOCK. +# CONFIG_FTL=m CONFIG_NFTL=m CONFIG_NFTL_RW=y @@ -2625,6 +2655,7 @@ CONFIG_PVPANIC_PCI=m # CONFIG_SCSI_MOD=y CONFIG_RAID_ATTRS=m +CONFIG_SCSI_COMMON=y CONFIG_SCSI=y CONFIG_SCSI_DMA=y CONFIG_SCSI_NETLINK=y @@ -2637,6 +2668,7 @@ CONFIG_BLK_DEV_SD=y CONFIG_CHR_DEV_ST=m CONFIG_BLK_DEV_SR=y CONFIG_CHR_DEV_SG=y +CONFIG_BLK_DEV_BSG=y CONFIG_CHR_DEV_SCH=m CONFIG_SCSI_ENCLOSURE=m CONFIG_SCSI_CONSTANTS=y @@ -2713,6 +2745,7 @@ CONFIG_SCSI_UFS_CDNS_PLATFORM=m # CONFIG_SCSI_UFS_DWC_TC_PLATFORM is not set # CONFIG_SCSI_UFS_BSG is not set CONFIG_SCSI_UFS_CRYPTO=y +CONFIG_SCSI_UFS_HPB=y CONFIG_SCSI_HPTIOP=m CONFIG_SCSI_BUSLOGIC=m CONFIG_SCSI_FLASHPOINT=y @@ -2920,7 +2953,6 @@ CONFIG_DM_THIN_PROVISIONING=m CONFIG_DM_CACHE=m CONFIG_DM_CACHE_SMQ=m CONFIG_DM_WRITECACHE=m -# CONFIG_DM_EBS is not set CONFIG_DM_ERA=m CONFIG_DM_CLONE=m CONFIG_DM_MIRROR=m @@ -3184,7 +3216,7 @@ CONFIG_CHELSIO_INLINE_CRYPTO=y # CONFIG_CHELSIO_IPSEC_INLINE is not set CONFIG_NET_VENDOR_CIRRUS=y CONFIG_CS89x0=m -CONFIG_CS89x0_PLATFORM=y +CONFIG_CS89x0_ISA=m CONFIG_NET_VENDOR_CISCO=y CONFIG_ENIC=m # CONFIG_NET_VENDOR_CORTINA is not set @@ -3246,6 +3278,7 @@ CONFIG_FM10K=m CONFIG_IGC=m CONFIG_NET_VENDOR_MICROSOFT=y CONFIG_JME=m +CONFIG_NET_VENDOR_LITEX=y CONFIG_NET_VENDOR_MARVELL=y CONFIG_MVMDIO=m CONFIG_SKGE=m @@ -3460,6 +3493,7 @@ CONFIG_LSI_ET1011C_PHY=m CONFIG_MARVELL_PHY=m CONFIG_MARVELL_10G_PHY=m CONFIG_MARVELL_88X2222_PHY=m +CONFIG_MAXLINEAR_GPHY=m CONFIG_MEDIATEK_GE_PHY=m CONFIG_MICREL_PHY=m CONFIG_MICROCHIP_PHY=m @@ -3485,6 +3519,10 @@ CONFIG_DP83869_PHY=m CONFIG_VITESSE_PHY=m CONFIG_XILINX_GMII2RGMII=m CONFIG_MICREL_KS8995MA=m + +# +# MCTP Device Drivers +# CONFIG_MDIO_DEVICE=y CONFIG_MDIO_BUS=y CONFIG_FWNODE_MDIO=y @@ -3740,7 +3778,6 @@ CONFIG_P54_PCI=m CONFIG_P54_SPI=m # CONFIG_P54_SPI_DEFAULT_EEPROM is not set CONFIG_P54_LEDS=y -# CONFIG_PRISM54 is not set CONFIG_WLAN_VENDOR_MARVELL=y CONFIG_LIBERTAS=m CONFIG_LIBERTAS_USB=m @@ -3878,8 +3915,6 @@ CONFIG_N2=m CONFIG_C101=m CONFIG_FARSYNC=m CONFIG_LAPBETHER=m -CONFIG_SBNI=m -# CONFIG_SBNI_MULTILINE is not set CONFIG_IEEE802154_DRIVERS=m CONFIG_IEEE802154_FAKELB=m CONFIG_IEEE802154_AT86RF230=m @@ -3899,6 +3934,7 @@ CONFIG_IEEE802154_MCR20A=m CONFIG_WWAN=y # CONFIG_WWAN_HWSIM is not set CONFIG_MHI_WWAN_CTRL=m +CONFIG_MHI_WWAN_MBIM=m CONFIG_RPMSG_WWAN_CTRL=m CONFIG_IOSM=m # end of Wireless WAN @@ -3911,6 +3947,7 @@ CONFIG_USB4_NET=m CONFIG_HYPERV_NET=m CONFIG_NETDEVSIM=m CONFIG_NET_FAILOVER=y +CONFIG_NETDEV_LEGACY_INIT=y CONFIG_ISDN=y CONFIG_ISDN_CAPI=y CONFIG_CAPI_TRACE=y @@ -3933,9 +3970,6 @@ CONFIG_MISDN_NETJET=m CONFIG_MISDN_HDLC=m CONFIG_MISDN_IPAC=m CONFIG_MISDN_ISAR=m -CONFIG_NVM=y -CONFIG_NVM_PBLK=m -# CONFIG_NVM_PBLK_DEBUG is not set # # Input device support @@ -4450,10 +4484,9 @@ CONFIG_XILLYBUS_CLASS=m CONFIG_XILLYBUS=m CONFIG_XILLYBUS_PCIE=m CONFIG_XILLYUSB=m -# end of Character devices - # CONFIG_RANDOM_TRUST_CPU is not set # CONFIG_RANDOM_TRUST_BOOTLOADER is not set +# end of Character devices # # I2C support @@ -4551,6 +4584,7 @@ CONFIG_I2C_VIPERBOARD=m CONFIG_I2C_PCA_ISA=m CONFIG_I2C_CROS_EC_TUNNEL=m CONFIG_SCx200_ACB=m +CONFIG_I2C_VIRTIO=m # end of I2C Hardware Bus support CONFIG_I2C_STUB=m @@ -4649,6 +4683,7 @@ CONFIG_PPS_CLIENT_GPIO=m # PTP clock support # CONFIG_PTP_1588_CLOCK=m +CONFIG_PTP_1588_CLOCK_OPTIONAL=m # # Enable PHYLIB and NETWORK_PHY_TIMESTAMPING to see the additional clocks. @@ -4813,6 +4848,7 @@ CONFIG_GPIO_VIPERBOARD=m # CONFIG_GPIO_AGGREGATOR=m # CONFIG_GPIO_MOCKUP is not set +CONFIG_GPIO_VIRTIO=m # end of Virtual GPIO drivers CONFIG_W1=m @@ -4857,6 +4893,7 @@ CONFIG_POWER_RESET=y CONFIG_POWER_RESET_ATC260X=m # CONFIG_POWER_RESET_MT6323 is not set CONFIG_POWER_RESET_RESTART=y +CONFIG_POWER_RESET_TPS65086=y CONFIG_POWER_SUPPLY=y # CONFIG_POWER_SUPPLY_DEBUG is not set CONFIG_POWER_SUPPLY_HWMON=y @@ -4911,6 +4948,7 @@ CONFIG_CHARGER_MAX77693=m CONFIG_CHARGER_MAX8997=m CONFIG_CHARGER_MAX8998=m CONFIG_CHARGER_MP2629=m +CONFIG_CHARGER_MT6360=m CONFIG_CHARGER_BQ2415X=m CONFIG_CHARGER_BQ24190=m CONFIG_CHARGER_BQ24257=m @@ -4926,6 +4964,7 @@ CONFIG_BATTERY_GOLDFISH=m CONFIG_BATTERY_RT5033=m CONFIG_CHARGER_RT9455=m CONFIG_CHARGER_CROS_USBPD=m +CONFIG_CHARGER_CROS_PCHG=m CONFIG_CHARGER_BD99954=m CONFIG_CHARGER_WILCO=m CONFIG_HWMON=y @@ -4955,6 +4994,7 @@ CONFIG_SENSORS_ADT7462=m CONFIG_SENSORS_ADT7470=m CONFIG_SENSORS_ADT7475=m CONFIG_SENSORS_AHT10=m +CONFIG_SENSORS_AQUACOMPUTER_D5NEXT=m CONFIG_SENSORS_AS370=m CONFIG_SENSORS_ASC7621=m CONFIG_SENSORS_AXI_FAN_CONTROL=m @@ -5093,6 +5133,7 @@ CONFIG_SENSORS_UCD9200=m CONFIG_SENSORS_XDPE122=m CONFIG_SENSORS_ZL6100=m CONFIG_SENSORS_SBTSI=m +CONFIG_SENSORS_SBRMI=m CONFIG_SENSORS_SHT15=m CONFIG_SENSORS_SHT21=m CONFIG_SENSORS_SHT3x=m @@ -5188,6 +5229,7 @@ CONFIG_INT3406_THERMAL=m CONFIG_INTEL_BXT_PMIC_THERMAL=m CONFIG_INTEL_PCH_THERMAL=m CONFIG_INTEL_TCC_COOLING=m +CONFIG_INTEL_MENLOW=m # end of Intel thermal drivers CONFIG_GENERIC_ADC_THERMAL=m @@ -5516,7 +5558,9 @@ CONFIG_REGULATOR_RT4831=m CONFIG_REGULATOR_RT5033=m CONFIG_REGULATOR_RT6160=m CONFIG_REGULATOR_RT6245=m +CONFIG_REGULATOR_RTQ2134=m CONFIG_REGULATOR_RTMV20=m +CONFIG_REGULATOR_RTQ6752=m CONFIG_REGULATOR_SKY81452=m CONFIG_REGULATOR_SLG51000=m CONFIG_REGULATOR_TPS51632=m @@ -6473,7 +6517,6 @@ CONFIG_DRM_AMDGPU_USERPTR=y CONFIG_DRM_AMD_DC=y CONFIG_DRM_AMD_DC_DCN=y # CONFIG_DRM_AMD_DC_HDCP is not set -CONFIG_DRM_AMD_DC_SI=y # CONFIG_DEBUG_KERNEL_DC is not set CONFIG_DRM_AMD_SECURE_DISPLAY=y # end of Display Engine Configuration @@ -6523,12 +6566,12 @@ CONFIG_DRM_VGEM=m # CONFIG_DRM_VKMS is not set CONFIG_DRM_VMWGFX=m CONFIG_DRM_VMWGFX_FBCON=y +# CONFIG_DRM_VMWGFX_MKSSTATS is not set CONFIG_DRM_GMA500=m CONFIG_DRM_UDL=m CONFIG_DRM_AST=m # CONFIG_DRM_MGAG200 is not set CONFIG_DRM_QXL=m -CONFIG_DRM_BOCHS=m CONFIG_DRM_VIRTIO_GPU=m CONFIG_DRM_PANEL=y @@ -6536,6 +6579,7 @@ CONFIG_DRM_PANEL=y # Display Panels # # CONFIG_DRM_PANEL_RASPBERRYPI_TOUCHSCREEN is not set +CONFIG_DRM_PANEL_WIDECHIPS_WS2401=m # end of Display Panels CONFIG_DRM_BRIDGE=y @@ -6549,6 +6593,7 @@ CONFIG_DRM_ANALOGIX_DP=m # end of Display Interface Bridges # CONFIG_DRM_ETNAVIV is not set +CONFIG_DRM_BOCHS=m CONFIG_DRM_CIRRUS_QEMU=m CONFIG_DRM_GM12U320=m CONFIG_DRM_SIMPLEDRM=m @@ -6680,7 +6725,7 @@ CONFIG_FB_MB862XX=m CONFIG_FB_MB862XX_PCI_GDC=y CONFIG_FB_MB862XX_I2C=y CONFIG_FB_HYPERV=m -CONFIG_FB_SIMPLE=y +CONFIG_FB_SIMPLE=m CONFIG_FB_SSD1307=m CONFIG_FB_SM712=m # end of Frame buffer Devices @@ -6933,6 +6978,7 @@ CONFIG_SND_HDA_CODEC_SIGMATEL=m CONFIG_SND_HDA_CODEC_VIA=m CONFIG_SND_HDA_CODEC_HDMI=m CONFIG_SND_HDA_CODEC_CIRRUS=m +CONFIG_SND_HDA_CODEC_CS8409=m CONFIG_SND_HDA_CODEC_CONEXANT=m CONFIG_SND_HDA_CODEC_CA0110=m CONFIG_SND_HDA_CODEC_CA0132=m @@ -7001,6 +7047,7 @@ CONFIG_SND_SOC_AMD_ACP3x=m CONFIG_SND_SOC_AMD_RV_RT5682_MACH=m CONFIG_SND_SOC_AMD_RENOIR=m CONFIG_SND_SOC_AMD_RENOIR_MACH=m +CONFIG_SND_SOC_AMD_ACP5x=m CONFIG_SND_ATMEL_SOC=m CONFIG_SND_BCM63XX_I2S_WHISTLER=m CONFIG_SND_DESIGNWARE_I2S=m @@ -7125,7 +7172,6 @@ CONFIG_SND_SOC_SOF_ALDERLAKE=m CONFIG_SND_SOC_SOF_HDA_COMMON=m CONFIG_SND_SOC_SOF_HDA_LINK=y CONFIG_SND_SOC_SOF_HDA_AUDIO_CODEC=y -# CONFIG_SND_SOC_SOF_HDA_ALWAYS_ENABLE_DMI_L1 is not set CONFIG_SND_SOC_SOF_HDA_LINK_BASELINE=m CONFIG_SND_SOC_SOF_HDA=m CONFIG_SND_SOC_SOF_INTEL_SOUNDWIRE_LINK_BASELINE=m @@ -7210,6 +7256,7 @@ CONFIG_SND_SOC_ES8328_SPI=m CONFIG_SND_SOC_GTM601=m CONFIG_SND_SOC_HDAC_HDMI=m CONFIG_SND_SOC_HDAC_HDA=m +CONFIG_SND_SOC_ICS43432=m CONFIG_SND_SOC_INNO_RK3036=m CONFIG_SND_SOC_MAX98088=m CONFIG_SND_SOC_MAX98090=m @@ -7979,12 +8026,10 @@ CONFIG_LEDS_CLASS_MULTICOLOR=m # CONFIG_LEDS_88PM860X=m CONFIG_LEDS_APU=m -CONFIG_LEDS_AS3645A=m CONFIG_LEDS_LM3530=m CONFIG_LEDS_LM3532=m CONFIG_LEDS_LM3533=m CONFIG_LEDS_LM3642=m -CONFIG_LEDS_LM3601X=m CONFIG_LEDS_MT6323=m CONFIG_LEDS_NET48XX=m CONFIG_LEDS_WRAP=m @@ -8029,12 +8074,14 @@ CONFIG_LEDS_NIC78BX=m CONFIG_LEDS_TI_LMU_COMMON=m CONFIG_LEDS_LM36274=m CONFIG_LEDS_TPS6105X=m -CONFIG_LEDS_SGM3140=m # # Flash and Torch LED drivers # +CONFIG_LEDS_AS3645A=m +CONFIG_LEDS_LM3601X=m # CONFIG_LEDS_RT8515 is not set +CONFIG_LEDS_SGM3140=m # # LED Triggers @@ -8293,6 +8340,7 @@ CONFIG_SYNC_FILE=y # CONFIG_DMABUF_DEBUG is not set # CONFIG_DMABUF_SELFTESTS is not set # CONFIG_DMABUF_HEAPS is not set +# CONFIG_DMABUF_SYSFS_STATS is not set # end of DMABUF options CONFIG_AUXDISPLAY=y @@ -8326,14 +8374,15 @@ CONFIG_UIO_PRUSS=m CONFIG_UIO_MF624=m CONFIG_UIO_HV_GENERIC=m CONFIG_UIO_DFL=m +CONFIG_VFIO=m CONFIG_VFIO_IOMMU_TYPE1=m CONFIG_VFIO_VIRQFD=m -CONFIG_VFIO=m CONFIG_VFIO_NOIOMMU=y -CONFIG_VFIO_PCI=m -CONFIG_VFIO_PCI_VGA=y +CONFIG_VFIO_PCI_CORE=m CONFIG_VFIO_PCI_MMAP=y CONFIG_VFIO_PCI_INTX=y +CONFIG_VFIO_PCI=m +CONFIG_VFIO_PCI_VGA=y CONFIG_VFIO_PCI_IGD=y CONFIG_VFIO_MDEV=m CONFIG_IRQ_BYPASS_MANAGER=m @@ -8354,6 +8403,7 @@ CONFIG_VIRTIO_MMIO_CMDLINE_DEVICES=y CONFIG_VIRTIO_DMA_SHARED_BUFFER=m CONFIG_VDPA=m # CONFIG_VDPA_SIM is not set +CONFIG_VDPA_USER=m CONFIG_IFCVF=m CONFIG_MLX5_VDPA=y CONFIG_MLX5_VDPA_NET=m @@ -8391,7 +8441,6 @@ CONFIG_XEN_XENBUS_FRONTEND=y CONFIG_XEN_GNTDEV=m CONFIG_XEN_GRANT_DEV_ALLOC=m # CONFIG_XEN_GRANT_DMA_ALLOC is not set -CONFIG_SWIOTLB_XEN=y CONFIG_XEN_PCIDEV_BACKEND=m CONFIG_XEN_PVCALLS_FRONTEND=m # CONFIG_XEN_PVCALLS_BACKEND is not set @@ -8687,8 +8736,6 @@ CONFIG_X86_PLATFORM_DEVICES=y CONFIG_ACPI_WMI=m CONFIG_WMI_BMOF=m CONFIG_HUAWEI_WMI=m -CONFIG_INTEL_WMI_SBL_FW_UPDATE=m -CONFIG_INTEL_WMI_THUNDERBOLT=m CONFIG_MXM_WMI=m CONFIG_PEAQ_WMI=m CONFIG_XIAOMI_WMI=m @@ -8703,6 +8750,7 @@ CONFIG_ASUS_LAPTOP=m CONFIG_ASUS_WIRELESS=m CONFIG_ASUS_WMI=m CONFIG_ASUS_NB_WMI=m +CONFIG_MERAKI_MX100=m CONFIG_EEEPC_LAPTOP=m CONFIG_EEEPC_WMI=m CONFIG_X86_PLATFORM_DRIVERS_DELL=y @@ -8741,14 +8789,28 @@ CONFIG_THINKPAD_ACPI_VIDEO=y CONFIG_THINKPAD_ACPI_HOTKEY_POLL=y CONFIG_THINKPAD_LMI=m CONFIG_X86_PLATFORM_DRIVERS_INTEL=y +CONFIG_INTEL_ATOMISP2_PDX86=y +CONFIG_INTEL_ATOMISP2_LED=m +CONFIG_INTEL_SAR_INT1092=m CONFIG_INTEL_CHT_INT33FE=m CONFIG_INTEL_SKL_INT3472=m -CONFIG_INTEL_ATOMISP2_LED=m +CONFIG_INTEL_PMC_CORE=y +CONFIG_INTEL_PMT_CLASS=m +CONFIG_INTEL_PMT_TELEMETRY=m +CONFIG_INTEL_PMT_CRASHLOG=m +CONFIG_INTEL_WMI=y +CONFIG_INTEL_WMI_SBL_FW_UPDATE=m +CONFIG_INTEL_WMI_THUNDERBOLT=m CONFIG_INTEL_HID_EVENT=m +CONFIG_INTEL_VBTN=m CONFIG_INTEL_INT0002_VGPIO=m -CONFIG_INTEL_MENLOW=m CONFIG_INTEL_OAKTRAIL=m -CONFIG_INTEL_VBTN=m +CONFIG_INTEL_BXTWC_PMIC_TMU=m +CONFIG_INTEL_CHTDC_TI_PWRBTN=m +CONFIG_INTEL_MRFLD_PWRBTN=m +CONFIG_INTEL_PUNIT_IPC=m +CONFIG_INTEL_RST=m +CONFIG_INTEL_SMARTCONNECT=m CONFIG_MSI_LAPTOP=m CONFIG_MSI_WMI=m CONFIG_PCENGINES_APU2=m @@ -8772,16 +8834,6 @@ CONFIG_I2C_MULTI_INSTANTIATE=m CONFIG_FW_ATTR_CLASS=m CONFIG_INTEL_IMR=y CONFIG_INTEL_IPS=m -CONFIG_INTEL_RST=m -CONFIG_INTEL_SMARTCONNECT=m -CONFIG_INTEL_BXTWC_PMIC_TMU=m -CONFIG_INTEL_CHTDC_TI_PWRBTN=m -CONFIG_INTEL_MRFLD_PWRBTN=m -CONFIG_INTEL_PMC_CORE=y -CONFIG_INTEL_PMT_CLASS=m -CONFIG_INTEL_PMT_TELEMETRY=m -CONFIG_INTEL_PMT_CRASHLOG=m -CONFIG_INTEL_PUNIT_IPC=m CONFIG_INTEL_SCU_IPC=y CONFIG_INTEL_SCU=y CONFIG_INTEL_SCU_PCI=y @@ -8860,6 +8912,8 @@ CONFIG_IOMMU_SUPPORT=y # end of Generic IOMMU Pagetable Support # CONFIG_IOMMU_DEBUGFS is not set +# CONFIG_IOMMU_DEFAULT_DMA_STRICT is not set +CONFIG_IOMMU_DEFAULT_DMA_LAZY=y # CONFIG_IOMMU_DEFAULT_PASSTHROUGH is not set CONFIG_IOMMU_DMA=y CONFIG_DMAR_TABLE=y @@ -9146,6 +9200,7 @@ CONFIG_SCD30_CORE=m CONFIG_SCD30_I2C=m CONFIG_SCD30_SERIAL=m CONFIG_SENSIRION_SGP30=m +CONFIG_SENSIRION_SGP40=m CONFIG_SPS30=m CONFIG_SPS30_I2C=m CONFIG_SPS30_SERIAL=m @@ -9444,6 +9499,7 @@ CONFIG_HID_SENSOR_CUSTOM_INTEL_HINGE=m # # Digital potentiometers # +CONFIG_AD5110=m CONFIG_AD5272=m CONFIG_DS1803=m CONFIG_MAX5432=m @@ -9780,13 +9836,13 @@ CONFIG_F2FS_FS_SECURITY=y # CONFIG_F2FS_CHECK_FS is not set # CONFIG_F2FS_FAULT_INJECTION is not set # CONFIG_F2FS_FS_COMPRESSION is not set +# CONFIG_F2FS_IOSTAT is not set CONFIG_ZONEFS_FS=m CONFIG_FS_DAX=y CONFIG_FS_POSIX_ACL=y CONFIG_EXPORTFS=y # CONFIG_EXPORTFS_BLOCK_OPS is not set CONFIG_FILE_LOCKING=y -CONFIG_MANDATORY_FILE_LOCKING=y # CONFIG_FS_ENCRYPTION is not set CONFIG_FS_VERITY=y # CONFIG_FS_VERITY_DEBUG is not set @@ -9820,15 +9876,12 @@ CONFIG_OVERLAY_FS=m # Caches # CONFIG_NETFS_SUPPORT=m -# CONFIG_NETFS_STATS is not set +CONFIG_NETFS_STATS=y CONFIG_FSCACHE=m CONFIG_FSCACHE_STATS=y -# CONFIG_FSCACHE_HISTOGRAM is not set # CONFIG_FSCACHE_DEBUG is not set -# CONFIG_FSCACHE_OBJECT_LIST is not set CONFIG_CACHEFILES=m # CONFIG_CACHEFILES_DEBUG is not set -# CONFIG_CACHEFILES_HISTOGRAM is not set # end of Caches # @@ -9854,6 +9907,9 @@ CONFIG_EXFAT_DEFAULT_IOCHARSET="utf8" CONFIG_NTFS_FS=m # CONFIG_NTFS_DEBUG is not set # CONFIG_NTFS_RW is not set +CONFIG_NTFS3_FS=m +CONFIG_NTFS3_LZX_XPRESS=y +# CONFIG_NTFS3_FS_POSIX_ACL is not set # end of DOS/FAT/EXFAT/NT Filesystems # @@ -9963,6 +10019,7 @@ CONFIG_PSTORE_COMPRESS_DEFAULT="deflate" # CONFIG_PSTORE_PMSG is not set # CONFIG_PSTORE_FTRACE is not set CONFIG_PSTORE_RAM=m +# CONFIG_PSTORE_BLK is not set CONFIG_SYSV_FS=m CONFIG_UFS_FS=m # CONFIG_UFS_FS_WRITE is not set @@ -10026,7 +10083,6 @@ CONFIG_CEPH_FS_SECURITY_LABEL=y CONFIG_CIFS=m # CONFIG_CIFS_STATS2 is not set CONFIG_CIFS_ALLOW_INSECURE_LEGACY=y -CONFIG_CIFS_WEAK_PW_HASH=y CONFIG_CIFS_UPCALL=y CONFIG_CIFS_XATTR=y CONFIG_CIFS_POSIX=y @@ -10037,6 +10093,8 @@ CONFIG_CIFS_DFS_UPCALL=y CONFIG_CIFS_SWN_UPCALL=y # CONFIG_CIFS_SMB_DIRECT is not set CONFIG_CIFS_FSCACHE=y +# CONFIG_SMB_SERVER is not set +CONFIG_SMBFS_COMMON=m CONFIG_CODA_FS=m CONFIG_AFS_FS=m # CONFIG_AFS_DEBUG is not set @@ -10203,13 +10261,24 @@ CONFIG_LSM="yama,loadpin,safesetid,integrity,apparmor,selinux,smack,tomoyo" # # Kernel hardening options # +CONFIG_GCC_PLUGIN_STRUCTLEAK=y # # Memory initialization # -CONFIG_INIT_STACK_NONE=y +# CONFIG_INIT_STACK_NONE is not set +# CONFIG_GCC_PLUGIN_STRUCTLEAK_USER is not set +# CONFIG_GCC_PLUGIN_STRUCTLEAK_BYREF is not set +CONFIG_GCC_PLUGIN_STRUCTLEAK_BYREF_ALL=y +# CONFIG_GCC_PLUGIN_STRUCTLEAK_VERBOSE is not set +CONFIG_GCC_PLUGIN_STACKLEAK=y +CONFIG_STACKLEAK_TRACK_MIN_SIZE=100 +# CONFIG_STACKLEAK_METRICS is not set +CONFIG_STACKLEAK_RUNTIME_DISABLE=y CONFIG_INIT_ON_ALLOC_DEFAULT_ON=y # CONFIG_INIT_ON_FREE_DEFAULT_ON is not set +CONFIG_CC_HAS_ZERO_CALL_USED_REGS=y +# CONFIG_ZERO_CALL_USED_REGS is not set # end of Memory initialization # end of Kernel hardening options # end of Security options @@ -10401,6 +10470,7 @@ CONFIG_CRYPTO_LIB_POLY1305_GENERIC=m CONFIG_CRYPTO_LIB_POLY1305=m CONFIG_CRYPTO_LIB_CHACHA20POLY1305=m CONFIG_CRYPTO_LIB_SHA256=y +CONFIG_CRYPTO_LIB_SM4=m CONFIG_CRYPTO_HW=y CONFIG_CRYPTO_DEV_PADLOCK=y CONFIG_CRYPTO_DEV_PADLOCK_AES=m @@ -10655,6 +10725,7 @@ CONFIG_KDB_CONTINUE_CATASTROPHIC=0 CONFIG_ARCH_HAS_EARLY_DEBUG=y CONFIG_ARCH_HAS_UBSAN_SANITIZE_ALL=y # CONFIG_UBSAN is not set +CONFIG_HAVE_KCSAN_COMPILER=y # end of Generic Kernel Debugging Instruments CONFIG_DEBUG_KERNEL=y @@ -10695,9 +10766,9 @@ CONFIG_CC_HAS_KASAN_GENERIC=y CONFIG_CC_HAS_WORKING_NOSANITIZE_ADDRESS=y CONFIG_HAVE_ARCH_KFENCE=y CONFIG_KFENCE=y -CONFIG_KFENCE_STATIC_KEYS=y CONFIG_KFENCE_SAMPLE_INTERVAL=0 CONFIG_KFENCE_NUM_OBJECTS=255 +CONFIG_KFENCE_STATIC_KEYS=y CONFIG_KFENCE_STRESS_TEST_FAULTS=0 # end of Memory Debugging @@ -10784,7 +10855,6 @@ CONFIG_RCU_CPU_STALL_TIMEOUT=60 # end of RCU Debugging # CONFIG_DEBUG_WQ_FORCE_RR_CPU is not set -# CONFIG_DEBUG_BLOCK_EXT_DEVT is not set # CONFIG_CPU_HOTPLUG_STATE_CONTROL is not set # CONFIG_LATENCYTOP is not set CONFIG_USER_STACKTRACE_SUPPORT=y @@ -10859,7 +10929,6 @@ CONFIG_IO_STRICT_DEVMEM=y # # x86 Debugging # -CONFIG_TRACE_IRQFLAGS_SUPPORT=y CONFIG_TRACE_IRQFLAGS_NMI_SUPPORT=y CONFIG_EARLY_PRINTK_USB=y # CONFIG_X86_VERBOSE_BOOTUP is not set @@ -10898,7 +10967,6 @@ CONFIG_CC_HAS_SANCOV_TRACE_PC=y CONFIG_RUNTIME_TESTING_MENU=y # CONFIG_LKDTM is not set # CONFIG_TEST_MIN_HEAP is not set -# CONFIG_TEST_SORT is not set # CONFIG_TEST_DIV64 is not set # CONFIG_KPROBES_SANITY_TEST is not set # CONFIG_BACKTRACE_SELF_TEST is not set diff --git a/gnu/packages/aux-files/linux-libre/5.14-x86_64.conf b/gnu/packages/aux-files/linux-libre/5.15-x86_64.conf index 844420becd..ca39ecadc2 100644 --- a/gnu/packages/aux-files/linux-libre/5.14-x86_64.conf +++ b/gnu/packages/aux-files/linux-libre/5.15-x86_64.conf @@ -1,19 +1,20 @@ # # Automatically generated file; DO NOT EDIT. -# Linux/x86 5.14.0 Kernel Configuration +# Linux/x86 5.15.5 Kernel Configuration # -CONFIG_CC_VERSION_TEXT="gcc (Debian 8.3.0-6) 8.3.0" +CONFIG_CC_VERSION_TEXT="gcc (GCC) 11.2.0" CONFIG_CC_IS_GCC=y -CONFIG_GCC_VERSION=80300 +CONFIG_GCC_VERSION=110200 CONFIG_CLANG_VERSION=0 CONFIG_AS_IS_GNU=y -CONFIG_AS_VERSION=23101 +CONFIG_AS_VERSION=23400 CONFIG_LD_IS_BFD=y -CONFIG_LD_VERSION=23101 +CONFIG_LD_VERSION=23400 CONFIG_LLD_VERSION=0 CONFIG_CC_CAN_LINK=y CONFIG_CC_CAN_LINK_STATIC=y CONFIG_CC_HAS_ASM_GOTO=y +CONFIG_CC_HAS_ASM_GOTO_OUTPUT=y CONFIG_CC_HAS_ASM_INLINE=y CONFIG_CC_HAS_NO_PROFILE_FN_ATTR=y CONFIG_IRQ_WORK=y @@ -25,6 +26,7 @@ CONFIG_THREAD_INFO_IN_TASK=y # CONFIG_INIT_ENV_ARG_LIMIT=32 # CONFIG_COMPILE_TEST is not set +# CONFIG_WERROR is not set CONFIG_LOCALVERSION="" # CONFIG_LOCALVERSION_AUTO is not set CONFIG_BUILD_SALT="" @@ -157,6 +159,7 @@ CONFIG_BUILD_BIN2C=y CONFIG_LOG_BUF_SHIFT=18 CONFIG_LOG_CPU_MAX_BUF_SHIFT=12 CONFIG_PRINTK_SAFE_LOG_BUF_SHIFT=13 +# CONFIG_PRINTK_INDEX is not set CONFIG_HAVE_UNSTABLE_SCHED_CLOCK=y # @@ -231,7 +234,6 @@ CONFIG_SYSFS_SYSCALL=y CONFIG_FHANDLE=y CONFIG_POSIX_TIMERS=y CONFIG_PRINTK=y -CONFIG_PRINTK_NMI=y CONFIG_BUG=y CONFIG_ELF_CORE=y CONFIG_PCSPKR_PLATFORM=y @@ -308,6 +310,7 @@ CONFIG_HAVE_SETUP_PER_CPU_AREA=y CONFIG_NEED_PER_CPU_EMBED_FIRST_CHUNK=y CONFIG_NEED_PER_CPU_PAGE_FIRST_CHUNK=y CONFIG_ARCH_HIBERNATION_POSSIBLE=y +CONFIG_ARCH_NR_GPIO=1024 CONFIG_ARCH_SUSPEND_POSSIBLE=y CONFIG_ARCH_WANT_GENERAL_HUGETLB=y CONFIG_AUDIT_ARCH=y @@ -350,13 +353,14 @@ CONFIG_XEN=y CONFIG_XEN_PV=y CONFIG_XEN_512GB=y CONFIG_XEN_PV_SMP=y -CONFIG_XEN_DOM0=y +CONFIG_XEN_PV_DOM0=y CONFIG_XEN_PVHVM=y CONFIG_XEN_PVHVM_SMP=y CONFIG_XEN_PVHVM_GUEST=y CONFIG_XEN_SAVE_RESTORE=y # CONFIG_XEN_DEBUG_FS is not set CONFIG_XEN_PVH=y +CONFIG_XEN_DOM0=y CONFIG_KVM_GUEST=y CONFIG_ARCH_CPUIDLE_HALTPOLL=y CONFIG_PVH=y @@ -413,6 +417,7 @@ CONFIG_PERF_EVENTS_INTEL_UNCORE=y CONFIG_PERF_EVENTS_INTEL_RAPL=y CONFIG_PERF_EVENTS_INTEL_CSTATE=y CONFIG_PERF_EVENTS_AMD_POWER=m +CONFIG_PERF_EVENTS_AMD_UNCORE=m # end of Performance monitoring CONFIG_X86_16BIT=y @@ -655,7 +660,6 @@ CONFIG_MMCONF_FAM10H=y # CONFIG_ISA_BUS is not set CONFIG_ISA_DMA_API=y CONFIG_AMD_NB=y -# CONFIG_X86_SYSFB is not set # end of Bus options (PCI etc.) # @@ -669,54 +673,6 @@ CONFIG_COMPAT_FOR_U64_ALIGNMENT=y CONFIG_SYSVIPC_COMPAT=y # end of Binary Emulations -# -# Firmware Drivers -# -CONFIG_EDD=y -CONFIG_EDD_OFF=y -CONFIG_FIRMWARE_MEMMAP=y -CONFIG_DMIID=y -CONFIG_DMI_SYSFS=m -CONFIG_DMI_SCAN_MACHINE_NON_EFI_FALLBACK=y -CONFIG_ISCSI_IBFT_FIND=y -CONFIG_ISCSI_IBFT=m -CONFIG_FW_CFG_SYSFS=m -# CONFIG_FW_CFG_SYSFS_CMDLINE is not set -# CONFIG_GOOGLE_FIRMWARE is not set - -# -# EFI (Extensible Firmware Interface) Support -# -CONFIG_EFI_VARS=y -CONFIG_EFI_ESRT=y -CONFIG_EFI_VARS_PSTORE=m -# CONFIG_EFI_VARS_PSTORE_DEFAULT_DISABLE is not set -CONFIG_EFI_RUNTIME_MAP=y -# CONFIG_EFI_FAKE_MEMMAP is not set -CONFIG_EFI_SOFT_RESERVE=y -CONFIG_EFI_RUNTIME_WRAPPERS=y -CONFIG_EFI_GENERIC_STUB_INITRD_CMDLINE_LOADER=y -CONFIG_EFI_BOOTLOADER_CONTROL=m -# CONFIG_EFI_CAPSULE_LOADER is not set -# CONFIG_EFI_TEST is not set -CONFIG_APPLE_PROPERTIES=y -CONFIG_RESET_ATTACK_MITIGATION=y -# CONFIG_EFI_RCI2_TABLE is not set -# CONFIG_EFI_DISABLE_PCI_DMA is not set -# end of EFI (Extensible Firmware Interface) Support - -CONFIG_UEFI_CPER=y -CONFIG_UEFI_CPER_X86=y -CONFIG_EFI_DEV_PATH_PARSER=y -CONFIG_EFI_EARLYCON=y -CONFIG_EFI_CUSTOM_SSDT_OVERLAYS=y - -# -# Tegra firmware driver -# -# end of Tegra firmware driver -# end of Firmware Drivers - CONFIG_HAVE_KVM=y CONFIG_HAVE_KVM_IRQCHIP=y CONFIG_HAVE_KVM_IRQFD=y @@ -772,6 +728,7 @@ CONFIG_HAVE_OPTPROBES=y CONFIG_HAVE_KPROBES_ON_FTRACE=y CONFIG_HAVE_FUNCTION_ERROR_INJECTION=y CONFIG_HAVE_NMI=y +CONFIG_TRACE_IRQFLAGS_SUPPORT=y CONFIG_HAVE_ARCH_TRACEHOOK=y CONFIG_HAVE_DMA_CONTIGUOUS=y CONFIG_GENERIC_SMP_IDLE_THREAD=y @@ -861,6 +818,7 @@ CONFIG_HAVE_PREEMPT_DYNAMIC=y CONFIG_ARCH_WANT_LD_ORPHAN_WARN=y CONFIG_ARCH_SUPPORTS_DEBUG_PAGEALLOC=y CONFIG_ARCH_HAS_ELFCORE_COMPAT=y +CONFIG_ARCH_HAS_PARANOID_L1D_FLUSH=y # # GCOV-based kernel profiling @@ -870,6 +828,10 @@ CONFIG_ARCH_HAS_GCOV_PROFILE_ALL=y # end of GCOV-based kernel profiling CONFIG_HAVE_GCC_PLUGINS=y +CONFIG_GCC_PLUGINS=y +# CONFIG_GCC_PLUGIN_CYC_COMPLEXITY is not set +CONFIG_GCC_PLUGIN_LATENT_ENTROPY=y +# CONFIG_GCC_PLUGIN_RANDSTRUCT is not set # end of General architecture-dependent options CONFIG_RT_MUTEXES=y @@ -892,16 +854,14 @@ CONFIG_MODPROBE_PATH="/run/current-system/profile/bin/modprobe" CONFIG_MODULES_TREE_LOOKUP=y CONFIG_BLOCK=y CONFIG_BLK_RQ_ALLOC_TIME=y -CONFIG_BLK_SCSI_REQUEST=y CONFIG_BLK_CGROUP_RWSTAT=y -CONFIG_BLK_DEV_BSG=y +CONFIG_BLK_DEV_BSG_COMMON=y CONFIG_BLK_DEV_BSGLIB=y CONFIG_BLK_DEV_INTEGRITY=y CONFIG_BLK_DEV_INTEGRITY_T10=y CONFIG_BLK_DEV_ZONED=y CONFIG_BLK_DEV_THROTTLING=y # CONFIG_BLK_DEV_THROTTLING_LOW is not set -CONFIG_BLK_CMDLINE_PARSER=y CONFIG_BLK_WBT=y CONFIG_BLK_WBT_MQ=y # CONFIG_BLK_CGROUP_IOLATENCY is not set @@ -945,6 +905,7 @@ CONFIG_BLK_MQ_PCI=y CONFIG_BLK_MQ_VIRTIO=y CONFIG_BLK_MQ_RDMA=y CONFIG_BLK_PM=y +CONFIG_BLOCK_HOLDER_DEPRECATED=y # # IO Schedulers @@ -1059,6 +1020,7 @@ CONFIG_ZSMALLOC=y # CONFIG_ZSMALLOC_STAT is not set CONFIG_GENERIC_EARLY_IOREMAP=y # CONFIG_DEFERRED_STRUCT_PAGE_INIT is not set +CONFIG_PAGE_IDLE_FLAG=y CONFIG_IDLE_PAGE_TRACKING=y CONFIG_ARCH_HAS_CACHE_LINE_SIZE=y CONFIG_ARCH_HAS_PTE_DEVMAP=y @@ -1078,6 +1040,14 @@ CONFIG_ARCH_HAS_PKEYS=y CONFIG_ARCH_HAS_PTE_SPECIAL=y CONFIG_MAPPING_DIRTY_HELPERS=y CONFIG_SECRETMEM=y + +# +# Data Access Monitoring +# +CONFIG_DAMON=y +CONFIG_DAMON_VADDR=y +# CONFIG_DAMON_DBGFS is not set +# end of Data Access Monitoring # end of Memory Management options CONFIG_NET=y @@ -1095,6 +1065,7 @@ CONFIG_PACKET=y CONFIG_PACKET_DIAG=m CONFIG_UNIX=y CONFIG_UNIX_SCM=y +CONFIG_AF_UNIX_OOB=y CONFIG_UNIX_DIAG=m CONFIG_TLS=m # CONFIG_TLS_DEVICE is not set @@ -1205,6 +1176,7 @@ CONFIG_IPV6_PIMSM_V2=y # CONFIG_IPV6_SEG6_LWTUNNEL is not set # CONFIG_IPV6_SEG6_HMAC is not set # CONFIG_IPV6_RPL_LWTUNNEL is not set +# CONFIG_IPV6_IOAM6_LWTUNNEL is not set CONFIG_NETLABEL=y CONFIG_MPTCP=y CONFIG_INET_MPTCP_DIAG=m @@ -1628,7 +1600,6 @@ CONFIG_BRIDGE_VLAN_FILTERING=y CONFIG_BRIDGE_MRP=y CONFIG_BRIDGE_CFM=y CONFIG_NET_DSA=m -CONFIG_NET_DSA_TAG_8021Q=m CONFIG_NET_DSA_TAG_AR9331=m CONFIG_NET_DSA_TAG_BRCM_COMMON=m CONFIG_NET_DSA_TAG_BRCM=m @@ -1994,6 +1965,7 @@ CONFIG_AF_RXRPC_IPV6=y # CONFIG_RXKAD is not set CONFIG_AF_KCM=m CONFIG_STREAM_PARSER=y +CONFIG_MCTP=m CONFIG_FIB_RULES=y CONFIG_WIRELESS=y CONFIG_WIRELESS_EXT=y @@ -2289,6 +2261,63 @@ CONFIG_MHI_BUS_PCI_GENERIC=m CONFIG_CONNECTOR=y CONFIG_PROC_EVENTS=y + +# +# Firmware Drivers +# + +# +# ARM System Control and Management Interface Protocol +# +# end of ARM System Control and Management Interface Protocol + +CONFIG_EDD=y +CONFIG_EDD_OFF=y +CONFIG_FIRMWARE_MEMMAP=y +CONFIG_DMIID=y +CONFIG_DMI_SYSFS=m +CONFIG_DMI_SCAN_MACHINE_NON_EFI_FALLBACK=y +CONFIG_ISCSI_IBFT_FIND=y +CONFIG_ISCSI_IBFT=m +CONFIG_FW_CFG_SYSFS=m +# CONFIG_FW_CFG_SYSFS_CMDLINE is not set +CONFIG_SYSFB=y +# CONFIG_SYSFB_SIMPLEFB is not set +# CONFIG_GOOGLE_FIRMWARE is not set + +# +# EFI (Extensible Firmware Interface) Support +# +CONFIG_EFI_VARS=y +CONFIG_EFI_ESRT=y +CONFIG_EFI_VARS_PSTORE=m +# CONFIG_EFI_VARS_PSTORE_DEFAULT_DISABLE is not set +CONFIG_EFI_RUNTIME_MAP=y +# CONFIG_EFI_FAKE_MEMMAP is not set +CONFIG_EFI_SOFT_RESERVE=y +CONFIG_EFI_RUNTIME_WRAPPERS=y +CONFIG_EFI_GENERIC_STUB_INITRD_CMDLINE_LOADER=y +CONFIG_EFI_BOOTLOADER_CONTROL=m +# CONFIG_EFI_CAPSULE_LOADER is not set +# CONFIG_EFI_TEST is not set +CONFIG_APPLE_PROPERTIES=y +CONFIG_RESET_ATTACK_MITIGATION=y +# CONFIG_EFI_RCI2_TABLE is not set +# CONFIG_EFI_DISABLE_PCI_DMA is not set +# end of EFI (Extensible Firmware Interface) Support + +CONFIG_UEFI_CPER=y +CONFIG_UEFI_CPER_X86=y +CONFIG_EFI_DEV_PATH_PARSER=y +CONFIG_EFI_EARLYCON=y +CONFIG_EFI_CUSTOM_SSDT_OVERLAYS=y + +# +# Tegra firmware driver +# +# end of Tegra firmware driver +# end of Firmware Drivers + CONFIG_GNSS=m CONFIG_GNSS_SERIAL=m CONFIG_GNSS_MTK_SERIAL=m @@ -2314,6 +2343,10 @@ CONFIG_MTD_REDBOOT_DIRECTORY_BLOCK=-1 CONFIG_MTD_BLKDEVS=m CONFIG_MTD_BLOCK=m CONFIG_MTD_BLOCK_RO=m + +# +# Note that in some cases UBI block is preferred. See MTD_UBI_BLOCK. +# CONFIG_FTL=m CONFIG_NFTL=m CONFIG_NFTL_RW=y @@ -2649,6 +2682,7 @@ CONFIG_PVPANIC_PCI=m # CONFIG_SCSI_MOD=y CONFIG_RAID_ATTRS=m +CONFIG_SCSI_COMMON=y CONFIG_SCSI=y CONFIG_SCSI_DMA=y CONFIG_SCSI_NETLINK=y @@ -2661,6 +2695,7 @@ CONFIG_BLK_DEV_SD=y CONFIG_CHR_DEV_ST=m CONFIG_BLK_DEV_SR=y CONFIG_CHR_DEV_SG=y +CONFIG_BLK_DEV_BSG=y CONFIG_CHR_DEV_SCH=m CONFIG_SCSI_ENCLOSURE=m CONFIG_SCSI_CONSTANTS=y @@ -2735,6 +2770,7 @@ CONFIG_SCSI_UFS_CDNS_PLATFORM=m # CONFIG_SCSI_UFS_DWC_TC_PLATFORM is not set # CONFIG_SCSI_UFS_BSG is not set CONFIG_SCSI_UFS_CRYPTO=y +CONFIG_SCSI_UFS_HPB=y CONFIG_SCSI_HPTIOP=m CONFIG_SCSI_BUSLOGIC=m CONFIG_SCSI_FLASHPOINT=y @@ -3257,6 +3293,7 @@ CONFIG_IGC=m CONFIG_NET_VENDOR_MICROSOFT=y CONFIG_MICROSOFT_MANA=m CONFIG_JME=m +CONFIG_NET_VENDOR_LITEX=y CONFIG_NET_VENDOR_MARVELL=y CONFIG_MVMDIO=m CONFIG_SKGE=m @@ -3469,6 +3506,7 @@ CONFIG_LSI_ET1011C_PHY=m CONFIG_MARVELL_PHY=m CONFIG_MARVELL_10G_PHY=m CONFIG_MARVELL_88X2222_PHY=m +CONFIG_MAXLINEAR_GPHY=m CONFIG_MEDIATEK_GE_PHY=m CONFIG_MICREL_PHY=m CONFIG_MICROCHIP_PHY=m @@ -3494,6 +3532,10 @@ CONFIG_DP83869_PHY=m CONFIG_VITESSE_PHY=m CONFIG_XILINX_GMII2RGMII=m CONFIG_MICREL_KS8995MA=m + +# +# MCTP Device Drivers +# CONFIG_MDIO_DEVICE=y CONFIG_MDIO_BUS=y CONFIG_FWNODE_MDIO=y @@ -3751,7 +3793,6 @@ CONFIG_P54_PCI=m CONFIG_P54_SPI=m # CONFIG_P54_SPI_DEFAULT_EEPROM is not set CONFIG_P54_LEDS=y -# CONFIG_PRISM54 is not set CONFIG_WLAN_VENDOR_MARVELL=y CONFIG_LIBERTAS=m CONFIG_LIBERTAS_USB=m @@ -3896,8 +3937,6 @@ CONFIG_WANXL=m CONFIG_PC300TOO=m CONFIG_FARSYNC=m CONFIG_LAPBETHER=m -CONFIG_SBNI=m -# CONFIG_SBNI_MULTILINE is not set CONFIG_IEEE802154_DRIVERS=m CONFIG_IEEE802154_FAKELB=m CONFIG_IEEE802154_AT86RF230=m @@ -3917,6 +3956,7 @@ CONFIG_IEEE802154_MCR20A=m CONFIG_WWAN=y # CONFIG_WWAN_HWSIM is not set CONFIG_MHI_WWAN_CTRL=m +CONFIG_MHI_WWAN_MBIM=m CONFIG_RPMSG_WWAN_CTRL=m CONFIG_IOSM=m # end of Wireless WAN @@ -3951,9 +3991,6 @@ CONFIG_MISDN_NETJET=m CONFIG_MISDN_HDLC=m CONFIG_MISDN_IPAC=m CONFIG_MISDN_ISAR=m -CONFIG_NVM=y -CONFIG_NVM_PBLK=m -# CONFIG_NVM_PBLK_DEBUG is not set # # Input device support @@ -4450,10 +4487,9 @@ CONFIG_XILLYBUS_CLASS=m CONFIG_XILLYBUS=m CONFIG_XILLYBUS_PCIE=m CONFIG_XILLYUSB=m -# end of Character devices - # CONFIG_RANDOM_TRUST_CPU is not set # CONFIG_RANDOM_TRUST_BOOTLOADER is not set +# end of Character devices # # I2C support @@ -4549,6 +4585,7 @@ CONFIG_I2C_VIPERBOARD=m # CONFIG_I2C_MLXCPLD=m CONFIG_I2C_CROS_EC_TUNNEL=m +CONFIG_I2C_VIRTIO=m # end of I2C Hardware Bus support CONFIG_I2C_STUB=m @@ -4646,6 +4683,7 @@ CONFIG_PPS_CLIENT_GPIO=m # PTP clock support # CONFIG_PTP_1588_CLOCK=m +CONFIG_PTP_1588_CLOCK_OPTIONAL=m # # Enable PHYLIB and NETWORK_PHY_TIMESTAMPING to see the additional clocks. @@ -4805,6 +4843,7 @@ CONFIG_GPIO_VIPERBOARD=m # CONFIG_GPIO_AGGREGATOR=m # CONFIG_GPIO_MOCKUP is not set +CONFIG_GPIO_VIRTIO=m # end of Virtual GPIO drivers CONFIG_W1=m @@ -4849,6 +4888,7 @@ CONFIG_POWER_RESET=y CONFIG_POWER_RESET_ATC260X=m # CONFIG_POWER_RESET_MT6323 is not set CONFIG_POWER_RESET_RESTART=y +CONFIG_POWER_RESET_TPS65086=y CONFIG_POWER_SUPPLY=y # CONFIG_POWER_SUPPLY_DEBUG is not set CONFIG_POWER_SUPPLY_HWMON=y @@ -4903,6 +4943,7 @@ CONFIG_CHARGER_MAX77693=m CONFIG_CHARGER_MAX8997=m CONFIG_CHARGER_MAX8998=m CONFIG_CHARGER_MP2629=m +CONFIG_CHARGER_MT6360=m CONFIG_CHARGER_BQ2415X=m CONFIG_CHARGER_BQ24190=m CONFIG_CHARGER_BQ24257=m @@ -4918,6 +4959,7 @@ CONFIG_BATTERY_GOLDFISH=m CONFIG_BATTERY_RT5033=m CONFIG_CHARGER_RT9455=m CONFIG_CHARGER_CROS_USBPD=m +CONFIG_CHARGER_CROS_PCHG=m CONFIG_CHARGER_BD99954=m CONFIG_CHARGER_WILCO=m CONFIG_BATTERY_SURFACE=m @@ -4949,6 +4991,7 @@ CONFIG_SENSORS_ADT7462=m CONFIG_SENSORS_ADT7470=m CONFIG_SENSORS_ADT7475=m CONFIG_SENSORS_AHT10=m +CONFIG_SENSORS_AQUACOMPUTER_D5NEXT=m CONFIG_SENSORS_AS370=m CONFIG_SENSORS_ASC7621=m CONFIG_SENSORS_AXI_FAN_CONTROL=m @@ -5087,6 +5130,7 @@ CONFIG_SENSORS_UCD9200=m CONFIG_SENSORS_XDPE122=m CONFIG_SENSORS_ZL6100=m CONFIG_SENSORS_SBTSI=m +CONFIG_SENSORS_SBRMI=m CONFIG_SENSORS_SHT15=m CONFIG_SENSORS_SHT21=m CONFIG_SENSORS_SHT3x=m @@ -5182,6 +5226,7 @@ CONFIG_PROC_THERMAL_MMIO_RAPL=m CONFIG_INTEL_BXT_PMIC_THERMAL=m CONFIG_INTEL_PCH_THERMAL=m CONFIG_INTEL_TCC_COOLING=m +CONFIG_INTEL_MENLOW=m # end of Intel thermal drivers CONFIG_GENERIC_ADC_THERMAL=m @@ -5496,7 +5541,9 @@ CONFIG_REGULATOR_RT4831=m CONFIG_REGULATOR_RT5033=m CONFIG_REGULATOR_RT6160=m CONFIG_REGULATOR_RT6245=m +CONFIG_REGULATOR_RTQ2134=m CONFIG_REGULATOR_RTMV20=m +CONFIG_REGULATOR_RTQ6752=m CONFIG_REGULATOR_SKY81452=m CONFIG_REGULATOR_SLG51000=m CONFIG_REGULATOR_TPS51632=m @@ -6431,7 +6478,6 @@ CONFIG_DRM_AMDGPU_USERPTR=y CONFIG_DRM_AMD_DC=y CONFIG_DRM_AMD_DC_DCN=y # CONFIG_DRM_AMD_DC_HDCP is not set -CONFIG_DRM_AMD_DC_SI=y # CONFIG_DEBUG_KERNEL_DC is not set CONFIG_DRM_AMD_SECURE_DISPLAY=y # end of Display Engine Configuration @@ -6483,12 +6529,12 @@ CONFIG_DRM_VGEM=m # CONFIG_DRM_VKMS is not set CONFIG_DRM_VMWGFX=m CONFIG_DRM_VMWGFX_FBCON=y +# CONFIG_DRM_VMWGFX_MKSSTATS is not set CONFIG_DRM_GMA500=m CONFIG_DRM_UDL=m CONFIG_DRM_AST=m # CONFIG_DRM_MGAG200 is not set CONFIG_DRM_QXL=m -CONFIG_DRM_BOCHS=m CONFIG_DRM_VIRTIO_GPU=m CONFIG_DRM_PANEL=y @@ -6496,6 +6542,7 @@ CONFIG_DRM_PANEL=y # Display Panels # # CONFIG_DRM_PANEL_RASPBERRYPI_TOUCHSCREEN is not set +CONFIG_DRM_PANEL_WIDECHIPS_WS2401=m # end of Display Panels CONFIG_DRM_BRIDGE=y @@ -6509,6 +6556,7 @@ CONFIG_DRM_ANALOGIX_DP=m # end of Display Interface Bridges # CONFIG_DRM_ETNAVIV is not set +CONFIG_DRM_BOCHS=m CONFIG_DRM_CIRRUS_QEMU=m CONFIG_DRM_GM12U320=m CONFIG_DRM_SIMPLEDRM=m @@ -6634,7 +6682,7 @@ CONFIG_FB_MB862XX=m CONFIG_FB_MB862XX_PCI_GDC=y CONFIG_FB_MB862XX_I2C=y CONFIG_FB_HYPERV=m -CONFIG_FB_SIMPLE=y +CONFIG_FB_SIMPLE=m CONFIG_FB_SSD1307=m CONFIG_FB_SM712=m # end of Frame buffer Devices @@ -6844,6 +6892,7 @@ CONFIG_SND_HDA_CODEC_SIGMATEL=m CONFIG_SND_HDA_CODEC_VIA=m CONFIG_SND_HDA_CODEC_HDMI=m CONFIG_SND_HDA_CODEC_CIRRUS=m +CONFIG_SND_HDA_CODEC_CS8409=m CONFIG_SND_HDA_CODEC_CONEXANT=m CONFIG_SND_HDA_CODEC_CA0110=m CONFIG_SND_HDA_CODEC_CA0132=m @@ -6912,6 +6961,7 @@ CONFIG_SND_SOC_AMD_ACP3x=m CONFIG_SND_SOC_AMD_RV_RT5682_MACH=m CONFIG_SND_SOC_AMD_RENOIR=m CONFIG_SND_SOC_AMD_RENOIR_MACH=m +CONFIG_SND_SOC_AMD_ACP5x=m CONFIG_SND_ATMEL_SOC=m CONFIG_SND_BCM63XX_I2S_WHISTLER=m CONFIG_SND_DESIGNWARE_I2S=m @@ -7036,7 +7086,6 @@ CONFIG_SND_SOC_SOF_ALDERLAKE=m CONFIG_SND_SOC_SOF_HDA_COMMON=m CONFIG_SND_SOC_SOF_HDA_LINK=y CONFIG_SND_SOC_SOF_HDA_AUDIO_CODEC=y -# CONFIG_SND_SOC_SOF_HDA_ALWAYS_ENABLE_DMI_L1 is not set CONFIG_SND_SOC_SOF_HDA_LINK_BASELINE=m CONFIG_SND_SOC_SOF_HDA=m CONFIG_SND_SOC_SOF_INTEL_SOUNDWIRE_LINK_BASELINE=m @@ -7122,6 +7171,7 @@ CONFIG_SND_SOC_ES8328_SPI=m CONFIG_SND_SOC_GTM601=m CONFIG_SND_SOC_HDAC_HDMI=m CONFIG_SND_SOC_HDAC_HDA=m +CONFIG_SND_SOC_ICS43432=m CONFIG_SND_SOC_INNO_RK3036=m CONFIG_SND_SOC_MAX98088=m CONFIG_SND_SOC_MAX98090=m @@ -7189,6 +7239,7 @@ CONFIG_SND_SOC_RT711_SDCA_SDW=m CONFIG_SND_SOC_RT715=m CONFIG_SND_SOC_RT715_SDW=m CONFIG_SND_SOC_RT715_SDCA_SDW=m +CONFIG_SND_SOC_SDW_MOCKUP=m CONFIG_SND_SOC_SGTL5000=m CONFIG_SND_SOC_SI476X=m CONFIG_SND_SOC_SIGMADSP=m @@ -7232,6 +7283,7 @@ CONFIG_SND_SOC_TS3A227E=m CONFIG_SND_SOC_TSCS42XX=m CONFIG_SND_SOC_TSCS454=m CONFIG_SND_SOC_UDA1334=m +CONFIG_SND_SOC_WCD_MBHC=m CONFIG_SND_SOC_WCD938X=m CONFIG_SND_SOC_WCD938X_SDW=m CONFIG_SND_SOC_WM5102=m @@ -7927,12 +7979,10 @@ CONFIG_LEDS_CLASS_MULTICOLOR=m # CONFIG_LEDS_88PM860X=m CONFIG_LEDS_APU=m -CONFIG_LEDS_AS3645A=m CONFIG_LEDS_LM3530=m CONFIG_LEDS_LM3532=m CONFIG_LEDS_LM3533=m CONFIG_LEDS_LM3642=m -CONFIG_LEDS_LM3601X=m CONFIG_LEDS_MT6323=m CONFIG_LEDS_PCA9532=m CONFIG_LEDS_PCA9532_GPIO=y @@ -7974,12 +8024,14 @@ CONFIG_LEDS_NIC78BX=m CONFIG_LEDS_TI_LMU_COMMON=m CONFIG_LEDS_LM36274=m CONFIG_LEDS_TPS6105X=m -CONFIG_LEDS_SGM3140=m # # Flash and Torch LED drivers # +CONFIG_LEDS_AS3645A=m +CONFIG_LEDS_LM3601X=m # CONFIG_LEDS_RT8515 is not set +CONFIG_LEDS_SGM3140=m # # LED Triggers @@ -8221,11 +8273,14 @@ CONFIG_DMA_VIRTUAL_CHANNELS=y CONFIG_DMA_ACPI=y CONFIG_ALTERA_MSGDMA=m CONFIG_INTEL_IDMA64=m +CONFIG_INTEL_IDXD_BUS=m CONFIG_INTEL_IDXD=m +# CONFIG_INTEL_IDXD_COMPAT is not set CONFIG_INTEL_IDXD_SVM=y CONFIG_INTEL_IDXD_PERFMON=y CONFIG_INTEL_IOATDMA=m CONFIG_PLX_DMA=m +CONFIG_AMD_PTDMA=m CONFIG_QCOM_HIDMA_MGMT=m CONFIG_QCOM_HIDMA=m CONFIG_DW_DMAC_CORE=m @@ -8254,6 +8309,7 @@ CONFIG_SYNC_FILE=y # CONFIG_DMABUF_DEBUG is not set # CONFIG_DMABUF_SELFTESTS is not set # CONFIG_DMABUF_HEAPS is not set +# CONFIG_DMABUF_SYSFS_STATS is not set # end of DMABUF options CONFIG_DCA=m @@ -8288,14 +8344,15 @@ CONFIG_UIO_PRUSS=m CONFIG_UIO_MF624=m CONFIG_UIO_HV_GENERIC=m CONFIG_UIO_DFL=m +CONFIG_VFIO=m CONFIG_VFIO_IOMMU_TYPE1=m CONFIG_VFIO_VIRQFD=m -CONFIG_VFIO=m CONFIG_VFIO_NOIOMMU=y -CONFIG_VFIO_PCI=m -CONFIG_VFIO_PCI_VGA=y +CONFIG_VFIO_PCI_CORE=m CONFIG_VFIO_PCI_MMAP=y CONFIG_VFIO_PCI_INTX=y +CONFIG_VFIO_PCI=m +CONFIG_VFIO_PCI_VGA=y CONFIG_VFIO_PCI_IGD=y CONFIG_VFIO_MDEV=m CONFIG_IRQ_BYPASS_MANAGER=m @@ -8317,6 +8374,7 @@ CONFIG_VIRTIO_MMIO_CMDLINE_DEVICES=y CONFIG_VIRTIO_DMA_SHARED_BUFFER=m CONFIG_VDPA=m # CONFIG_VDPA_SIM is not set +CONFIG_VDPA_USER=m CONFIG_IFCVF=m CONFIG_MLX5_VDPA=y CONFIG_MLX5_VDPA_NET=m @@ -8661,8 +8719,6 @@ CONFIG_X86_PLATFORM_DEVICES=y CONFIG_ACPI_WMI=m CONFIG_WMI_BMOF=m CONFIG_HUAWEI_WMI=m -CONFIG_INTEL_WMI_SBL_FW_UPDATE=m -CONFIG_INTEL_WMI_THUNDERBOLT=m CONFIG_MXM_WMI=m CONFIG_PEAQ_WMI=m CONFIG_XIAOMI_WMI=m @@ -8677,6 +8733,7 @@ CONFIG_ASUS_LAPTOP=m CONFIG_ASUS_WIRELESS=m CONFIG_ASUS_WMI=m CONFIG_ASUS_NB_WMI=m +CONFIG_MERAKI_MX100=m CONFIG_EEEPC_LAPTOP=m CONFIG_EEEPC_WMI=m CONFIG_X86_PLATFORM_DRIVERS_DELL=y @@ -8714,14 +8771,38 @@ CONFIG_THINKPAD_ACPI_VIDEO=y CONFIG_THINKPAD_ACPI_HOTKEY_POLL=y CONFIG_THINKPAD_LMI=m CONFIG_X86_PLATFORM_DRIVERS_INTEL=y +CONFIG_INTEL_ATOMISP2_PDX86=y +CONFIG_INTEL_ATOMISP2_LED=m +CONFIG_INTEL_SAR_INT1092=m CONFIG_INTEL_CHT_INT33FE=m CONFIG_INTEL_SKL_INT3472=m -CONFIG_INTEL_ATOMISP2_LED=m +CONFIG_INTEL_PMC_CORE=y +CONFIG_INTEL_PMT_CLASS=m +CONFIG_INTEL_PMT_TELEMETRY=m +CONFIG_INTEL_PMT_CRASHLOG=m + +# +# Intel Speed Select Technology interface support +# +CONFIG_INTEL_SPEED_SELECT_INTERFACE=m +# end of Intel Speed Select Technology interface support + +CONFIG_INTEL_TELEMETRY=m +CONFIG_INTEL_WMI=y +CONFIG_INTEL_WMI_SBL_FW_UPDATE=m +CONFIG_INTEL_WMI_THUNDERBOLT=m CONFIG_INTEL_HID_EVENT=m +CONFIG_INTEL_VBTN=m CONFIG_INTEL_INT0002_VGPIO=m -CONFIG_INTEL_MENLOW=m CONFIG_INTEL_OAKTRAIL=m -CONFIG_INTEL_VBTN=m +CONFIG_INTEL_BXTWC_PMIC_TMU=m +CONFIG_INTEL_CHTDC_TI_PWRBTN=m +CONFIG_INTEL_MRFLD_PWRBTN=m +CONFIG_INTEL_PUNIT_IPC=m +CONFIG_INTEL_RST=m +CONFIG_INTEL_SMARTCONNECT=m +# CONFIG_INTEL_TURBO_MAX_3 is not set +CONFIG_INTEL_UNCORE_FREQ_CONTROL=m CONFIG_MSI_LAPTOP=m CONFIG_MSI_WMI=m CONFIG_PCENGINES_APU2=m @@ -8744,31 +8825,11 @@ CONFIG_I2C_MULTI_INSTANTIATE=m # CONFIG_TOUCHSCREEN_DMI is not set CONFIG_FW_ATTR_CLASS=m CONFIG_INTEL_IPS=m -CONFIG_INTEL_RST=m -CONFIG_INTEL_SMARTCONNECT=m - -# -# Intel Speed Select Technology interface support -# -CONFIG_INTEL_SPEED_SELECT_INTERFACE=m -# end of Intel Speed Select Technology interface support - -# CONFIG_INTEL_TURBO_MAX_3 is not set -CONFIG_INTEL_UNCORE_FREQ_CONTROL=m -CONFIG_INTEL_BXTWC_PMIC_TMU=m -CONFIG_INTEL_CHTDC_TI_PWRBTN=m -CONFIG_INTEL_MRFLD_PWRBTN=m -CONFIG_INTEL_PMC_CORE=y -CONFIG_INTEL_PMT_CLASS=m -CONFIG_INTEL_PMT_TELEMETRY=m -CONFIG_INTEL_PMT_CRASHLOG=m -CONFIG_INTEL_PUNIT_IPC=m CONFIG_INTEL_SCU_IPC=y CONFIG_INTEL_SCU=y CONFIG_INTEL_SCU_PCI=y CONFIG_INTEL_SCU_PLATFORM=m CONFIG_INTEL_SCU_IPC_UTIL=m -CONFIG_INTEL_TELEMETRY=m CONFIG_PMC_ATOM=y CONFIG_CHROME_PLATFORMS=y CONFIG_CHROMEOS_LAPTOP=m @@ -8857,6 +8918,8 @@ CONFIG_IOMMU_IO_PGTABLE=y # end of Generic IOMMU Pagetable Support # CONFIG_IOMMU_DEBUGFS is not set +# CONFIG_IOMMU_DEFAULT_DMA_STRICT is not set +CONFIG_IOMMU_DEFAULT_DMA_LAZY=y # CONFIG_IOMMU_DEFAULT_PASSTHROUGH is not set CONFIG_IOMMU_DMA=y CONFIG_IOMMU_SVA_LIB=y @@ -9156,6 +9219,7 @@ CONFIG_SCD30_CORE=m CONFIG_SCD30_I2C=m CONFIG_SCD30_SERIAL=m CONFIG_SENSIRION_SGP30=m +CONFIG_SENSIRION_SGP40=m CONFIG_SPS30=m CONFIG_SPS30_I2C=m CONFIG_SPS30_SERIAL=m @@ -9454,6 +9518,7 @@ CONFIG_HID_SENSOR_CUSTOM_INTEL_HINGE=m # # Digital potentiometers # +CONFIG_AD5110=m CONFIG_AD5272=m CONFIG_DS1803=m CONFIG_MAX5432=m @@ -9803,6 +9868,7 @@ CONFIG_F2FS_FS_SECURITY=y # CONFIG_F2FS_CHECK_FS is not set # CONFIG_F2FS_FAULT_INJECTION is not set # CONFIG_F2FS_FS_COMPRESSION is not set +# CONFIG_F2FS_IOSTAT is not set CONFIG_ZONEFS_FS=m CONFIG_FS_DAX=y CONFIG_FS_DAX_PMD=y @@ -9810,7 +9876,6 @@ CONFIG_FS_POSIX_ACL=y CONFIG_EXPORTFS=y # CONFIG_EXPORTFS_BLOCK_OPS is not set CONFIG_FILE_LOCKING=y -CONFIG_MANDATORY_FILE_LOCKING=y # CONFIG_FS_ENCRYPTION is not set CONFIG_FS_VERITY=y # CONFIG_FS_VERITY_DEBUG is not set @@ -9845,15 +9910,12 @@ CONFIG_OVERLAY_FS=m # Caches # CONFIG_NETFS_SUPPORT=m -# CONFIG_NETFS_STATS is not set +CONFIG_NETFS_STATS=y CONFIG_FSCACHE=m CONFIG_FSCACHE_STATS=y -# CONFIG_FSCACHE_HISTOGRAM is not set # CONFIG_FSCACHE_DEBUG is not set -# CONFIG_FSCACHE_OBJECT_LIST is not set CONFIG_CACHEFILES=m # CONFIG_CACHEFILES_DEBUG is not set -# CONFIG_CACHEFILES_HISTOGRAM is not set # end of Caches # @@ -9879,6 +9941,10 @@ CONFIG_EXFAT_DEFAULT_IOCHARSET="utf8" CONFIG_NTFS_FS=m # CONFIG_NTFS_DEBUG is not set # CONFIG_NTFS_RW is not set +CONFIG_NTFS3_FS=m +# CONFIG_NTFS3_64BIT_CLUSTER is not set +CONFIG_NTFS3_LZX_XPRESS=y +# CONFIG_NTFS3_FS_POSIX_ACL is not set # end of DOS/FAT/EXFAT/NT Filesystems # @@ -9992,6 +10058,7 @@ CONFIG_PSTORE_COMPRESS_DEFAULT="deflate" # CONFIG_PSTORE_PMSG is not set # CONFIG_PSTORE_FTRACE is not set CONFIG_PSTORE_RAM=m +# CONFIG_PSTORE_BLK is not set CONFIG_SYSV_FS=m CONFIG_UFS_FS=m # CONFIG_UFS_FS_WRITE is not set @@ -10055,7 +10122,6 @@ CONFIG_CEPH_FS_SECURITY_LABEL=y CONFIG_CIFS=m # CONFIG_CIFS_STATS2 is not set CONFIG_CIFS_ALLOW_INSECURE_LEGACY=y -CONFIG_CIFS_WEAK_PW_HASH=y CONFIG_CIFS_UPCALL=y CONFIG_CIFS_XATTR=y CONFIG_CIFS_POSIX=y @@ -10066,6 +10132,8 @@ CONFIG_CIFS_DFS_UPCALL=y CONFIG_CIFS_SWN_UPCALL=y # CONFIG_CIFS_SMB_DIRECT is not set CONFIG_CIFS_FSCACHE=y +# CONFIG_SMB_SERVER is not set +CONFIG_SMBFS_COMMON=m CONFIG_CODA_FS=m CONFIG_AFS_FS=m # CONFIG_AFS_DEBUG is not set @@ -10232,13 +10300,24 @@ CONFIG_LSM="yama,loadpin,safesetid,integrity,apparmor,selinux,smack,tomoyo" # # Kernel hardening options # +CONFIG_GCC_PLUGIN_STRUCTLEAK=y # # Memory initialization # -CONFIG_INIT_STACK_NONE=y +# CONFIG_INIT_STACK_NONE is not set +# CONFIG_GCC_PLUGIN_STRUCTLEAK_USER is not set +# CONFIG_GCC_PLUGIN_STRUCTLEAK_BYREF is not set +CONFIG_GCC_PLUGIN_STRUCTLEAK_BYREF_ALL=y +# CONFIG_GCC_PLUGIN_STRUCTLEAK_VERBOSE is not set +CONFIG_GCC_PLUGIN_STACKLEAK=y +CONFIG_STACKLEAK_TRACK_MIN_SIZE=100 +# CONFIG_STACKLEAK_METRICS is not set +CONFIG_STACKLEAK_RUNTIME_DISABLE=y CONFIG_INIT_ON_ALLOC_DEFAULT_ON=y # CONFIG_INIT_ON_FREE_DEFAULT_ON is not set +CONFIG_CC_HAS_ZERO_CALL_USED_REGS=y +# CONFIG_ZERO_CALL_USED_REGS is not set # end of Memory initialization # end of Kernel hardening options # end of Security options @@ -10399,6 +10478,8 @@ CONFIG_CRYPTO_SERPENT_SSE2_X86_64=m CONFIG_CRYPTO_SERPENT_AVX_X86_64=m CONFIG_CRYPTO_SERPENT_AVX2_X86_64=m CONFIG_CRYPTO_SM4=m +CONFIG_CRYPTO_SM4_AESNI_AVX_X86_64=m +CONFIG_CRYPTO_SM4_AESNI_AVX2_X86_64=m CONFIG_CRYPTO_TEA=m CONFIG_CRYPTO_TWOFISH=m CONFIG_CRYPTO_TWOFISH_COMMON=m @@ -10457,6 +10538,7 @@ CONFIG_CRYPTO_LIB_POLY1305_GENERIC=m CONFIG_CRYPTO_LIB_POLY1305=m CONFIG_CRYPTO_LIB_CHACHA20POLY1305=m CONFIG_CRYPTO_LIB_SHA256=y +CONFIG_CRYPTO_LIB_SM4=m CONFIG_CRYPTO_HW=y CONFIG_CRYPTO_DEV_PADLOCK=y CONFIG_CRYPTO_DEV_PADLOCK_AES=m @@ -10718,6 +10800,8 @@ CONFIG_ARCH_HAS_EARLY_DEBUG=y CONFIG_ARCH_HAS_UBSAN_SANITIZE_ALL=y # CONFIG_UBSAN is not set CONFIG_HAVE_ARCH_KCSAN=y +CONFIG_HAVE_KCSAN_COMPILER=y +# CONFIG_KCSAN is not set # end of Generic Kernel Debugging Instruments CONFIG_DEBUG_KERNEL=y @@ -10760,9 +10844,9 @@ CONFIG_CC_HAS_WORKING_NOSANITIZE_ADDRESS=y # CONFIG_KASAN is not set CONFIG_HAVE_ARCH_KFENCE=y CONFIG_KFENCE=y -CONFIG_KFENCE_STATIC_KEYS=y CONFIG_KFENCE_SAMPLE_INTERVAL=0 CONFIG_KFENCE_NUM_OBJECTS=255 +CONFIG_KFENCE_STATIC_KEYS=y CONFIG_KFENCE_STRESS_TEST_FAULTS=0 # end of Memory Debugging @@ -10851,7 +10935,6 @@ CONFIG_RCU_CPU_STALL_TIMEOUT=60 # end of RCU Debugging # CONFIG_DEBUG_WQ_FORCE_RR_CPU is not set -# CONFIG_DEBUG_BLOCK_EXT_DEVT is not set # CONFIG_CPU_HOTPLUG_STATE_CONTROL is not set # CONFIG_LATENCYTOP is not set CONFIG_USER_STACKTRACE_SUPPORT=y @@ -10929,7 +11012,6 @@ CONFIG_IO_STRICT_DEVMEM=y # # x86 Debugging # -CONFIG_TRACE_IRQFLAGS_SUPPORT=y CONFIG_TRACE_IRQFLAGS_NMI_SUPPORT=y CONFIG_EARLY_PRINTK_USB=y # CONFIG_X86_VERBOSE_BOOTUP is not set @@ -10971,7 +11053,6 @@ CONFIG_CC_HAS_SANCOV_TRACE_PC=y CONFIG_RUNTIME_TESTING_MENU=y # CONFIG_LKDTM is not set # CONFIG_TEST_MIN_HEAP is not set -# CONFIG_TEST_SORT is not set # CONFIG_TEST_DIV64 is not set # CONFIG_KPROBES_SANITY_TEST is not set # CONFIG_BACKTRACE_SELF_TEST is not set diff --git a/gnu/packages/backup.scm b/gnu/packages/backup.scm index 882042d81f..5e147113b1 100644 --- a/gnu/packages/backup.scm +++ b/gnu/packages/backup.scm @@ -1173,13 +1173,13 @@ compression parameters used by Gzip.") (define-public borgmatic (package (name "borgmatic") - (version "1.5.20") + (version "1.5.21") (source (origin (method url-fetch) (uri (pypi-uri "borgmatic" version)) (sha256 - (base32 "1rdpj1mii4fbyprg56krf5k0xsd97ghybaabr7zdhsrcsxf719ha")))) + (base32 "1kw3mvyby8zd7ql3g930w7z55k8pi9iwj43kh8lvi58b4nzrvamq")))) (build-system python-build-system) (arguments `(#:phases diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 5d29a3acf2..a25f56ad02 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -11,6 +11,7 @@ ;;; Copyright © 2020 Jakub Kądziołka <kuba@kadziolka.net> ;;; Copyright © 2021 Hong Li <hli@mdc-berlin.de> ;;; Copyright © 2021 Tim Howes <timhowes@lavabit.com> +;;; Copyright © 2021 Nicolas Vallet <nls.vallet@gmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -286,6 +287,28 @@ RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are \"active\" by default.") (license license:artistic2.0))) +(define-public r-bsgenome-drerio-ucsc-danrer11 + (package + (name "r-bsgenome-drerio-ucsc-danrer11") + (version "1.4.2") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "BSgenome.Drerio.UCSC.danRer11" + version 'annotation)) + (sha256 + (base32 "08a928mqzv2jxngjcs4yr6ni1b9z9al6jdngwi438j8hm41cwk4v")))) + (properties `((upstream-name . "BSgenome.Drerio.UCSC.danRer11"))) + (build-system r-build-system) + (propagated-inputs + `(("r-bsgenome" ,r-bsgenome))) + (home-page "https://bioconductor.org/packages/BSgenome.Drerio.UCSC.danRer11") + (synopsis "Full genome sequences for Danio rerio (UCSC version danRer11)") + (description + "This package provides full genome sequences for Danio rerio (Zebrafish) +as provided by UCSC (danRer11, May 2017) and stored in Biostrings objects.") + (license license:artistic2.0))) + (define-public r-bsgenome-hsapiens-1000genomes-hs37d5 (package (name "r-bsgenome-hsapiens-1000genomes-hs37d5") @@ -1588,6 +1611,33 @@ array-like objects like @code{DataFrame} objects (typically with Rle columns), @code{Matrix} objects, and ordinary arrays and data frames.") (license license:artistic2.0))) +(define-public r-derfinderhelper + (package + (name "r-derfinderhelper") + (version "1.28.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "derfinderHelper" version)) + (sha256 + (base32 "06x0wy2wzpngak1pnrj2p0xzlx1nbcz0hs3p9q5ic6ib2rgwrh35")))) + (properties `((upstream-name . "derfinderHelper"))) + (build-system r-build-system) + (propagated-inputs + `(("r-iranges" ,r-iranges) + ("r-matrix" ,r-matrix) + ("r-s4vectors" ,r-s4vectors))) + (native-inputs + `(("r-knitr" ,r-knitr))) + (home-page "https://github.com/leekgroup/derfinderHelper") + (synopsis "Helper for derfinder") + (description + "This package speeds up the derfinder package when using multiple cores. +It is particularly useful when using BiocParallel and it helps reduce the time +spent loading the full derfinder package when running the F-statistics +calculation in parallel.") + (license license:artistic2.0))) + (define-public r-bluster (package (name "r-bluster") @@ -2234,13 +2284,13 @@ on Bioconductor or which replace R functions.") (define-public r-biomart (package (name "r-biomart") - (version "2.50.0") + (version "2.50.1") (source (origin (method url-fetch) (uri (bioconductor-uri "biomaRt" version)) (sha256 (base32 - "069wqihm8pj3r41dizvdbj4jnw9bsc5jrz8czfrak5v69bgk5v5q")))) + "1lm8axjmi2k1d2x0gdlvs0fzsd68xvxx7sn1wn6v4wr0pv85qhkz")))) (properties `((upstream-name . "biomaRt"))) (build-system r-build-system) @@ -2272,13 +2322,13 @@ powerful online queries from gene annotation to database mining.") (define-public r-biocparallel (package (name "r-biocparallel") - (version "1.28.0") + (version "1.28.1") (source (origin (method url-fetch) (uri (bioconductor-uri "BiocParallel" version)) (sha256 (base32 - "0jqgbpjppwinzw100qhc42kc95znq6xanl26bi8m9cq7yggbpra6")))) + "04s6y7q9dvg26fazs6lzkm668zpl3136j9gd5hkyihyrf4a1w3g3")))) (properties `((upstream-name . "BiocParallel"))) (build-system r-build-system) @@ -3164,13 +3214,13 @@ provide added flexibility for data combination and manipulation.") (define-public r-genomicranges (package (name "r-genomicranges") - (version "1.46.0") + (version "1.46.1") (source (origin (method url-fetch) (uri (bioconductor-uri "GenomicRanges" version)) (sha256 (base32 - "03fdmzcf8h17ksa3byc3k5mxc65pqrbcnw00myz1q53l01p3cnf2")))) + "133r27wsdyppjv9kq0d2xamx007lkf416nnlaygs4hs3a76p9xwx")))) (properties `((upstream-name . "GenomicRanges"))) (build-system r-build-system) @@ -4143,6 +4193,46 @@ differential expression analysis, RNAseq data and related problems.") ;; Any version of the LGPL (license license:lgpl3+))) +(define-public r-scdblfinder + (package + (name "r-scdblfinder") + (version "1.8.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "scDblFinder" version)) + (sha256 + (base32 "0wzmmcsnjybgzbc5rn4i72n26j9n59dfy1zg8ij0q8p4276jplsd")))) + (properties `((upstream-name . "scDblFinder"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocgenerics" ,r-biocgenerics) + ("r-biocneighbors" ,r-biocneighbors) + ("r-biocparallel" ,r-biocparallel) + ("r-biocsingular" ,r-biocsingular) + ("r-bluster" ,r-bluster) + ("r-delayedarray" ,r-delayedarray) + ("r-igraph" ,r-igraph) + ("r-mass" ,r-mass) + ("r-matrix" ,r-matrix) + ("r-s4vectors" ,r-s4vectors) + ("r-scater" ,r-scater) + ("r-scran" ,r-scran) + ("r-scuttle" ,r-scuttle) + ("r-singlecellexperiment" ,r-singlecellexperiment) + ("r-summarizedexperiment" ,r-summarizedexperiment) + ("r-xgboost" ,r-xgboost))) + (native-inputs `(("r-knitr" ,r-knitr))) + (home-page "https://github.com/plger/scDblFinder") + (synopsis "Detect multiplets in single-cell RNA sequencing data") + (description + "The scDblFinder package gathers various methods for the detection and +handling of doublets/multiplets in single-cell RNA sequencing data (i.e. +multiple cells captured within the same droplet or reaction volume). It +includes methods formerly found in the scran package, and the new fast and +comprehensive scDblFinder method.") + (license license:gpl3))) + (define-public r-seqlogo (package (name "r-seqlogo") @@ -4337,6 +4427,39 @@ events and allows for the incorporation of prior knowledge through supervised graph construction.") (license license:artistic2.0))) +(define-public r-stringdb + (package + (name "r-stringdb") + (version "2.6.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "STRINGdb" version)) + (sha256 + (base32 "1hvb73anhbf1g82nn5m11s783z6ihvlavf7p30w29qggxggnl6lm")))) + (properties `((upstream-name . "STRINGdb"))) + (build-system r-build-system) + (propagated-inputs + `(("r-gplots" ,r-gplots) + ("r-hash" ,r-hash) + ("r-igraph" ,r-igraph) + ("r-plotrix" ,r-plotrix) + ("r-plyr" ,r-plyr) + ("r-png" ,r-png) + ("r-rcolorbrewer" ,r-rcolorbrewer) + ("r-rcurl" ,r-rcurl) + ("r-sqldf" ,r-sqldf))) + (home-page "https://git.bioconductor.org/packages/STRINGdb") + (synopsis "Search tool for the retrieval of interacting proteins database") + (description + "The @code{STRINGdb} package provides an R interface to the STRING +protein-protein interactions database. @url{https://www.string-db.org, +STRING} is a database of known and predicted protein-protein interactions. +The interactions include direct (physical) and indirect (functional) +associations. Each interaction is associated with a combined confidence score +that integrates the various evidences.") + (license license:gpl2))) + (define-public r-structuralvariantannotation (package (name "r-structuralvariantannotation") @@ -4613,6 +4736,69 @@ their variance is independent of the mean, and they are usually more sensitive and specific in detecting differential transcription.") (license license:artistic2.0))) +(define-public r-xina + (package + (name "r-xina") + (version "1.12.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "XINA" version)) + (sha256 + (base32 "14j1rn3p7i0rlqkbbg0a6pyhb97ifzvsbw6vfxw9pna7zv7rbhsp")))) + (properties `((upstream-name . "XINA"))) + (build-system r-build-system) + (propagated-inputs + `(("r-alluvial" ,r-alluvial) + ("r-ggplot2" ,r-ggplot2) + ("r-gridextra" ,r-gridextra) + ("r-igraph" ,r-igraph) + ("r-mclust" ,r-mclust) + ("r-plyr" ,r-plyr) + ("r-stringdb" ,r-stringdb))) + (native-inputs `(("r-knitr" ,r-knitr))) + (home-page "https://git.bioconductor.org/packages/XINA") + (synopsis "Identifying proteins that exhibit similar patterns") + (description + "The aim of @code{XINA} is to determine which proteins exhibit similar +patterns within and across experimental conditions, since proteins with +co-abundance patterns may have common molecular functions. @code{XINA} imports +multiple datasets, tags dataset in silico, and combines the data for subsequent +subgrouping into multiple clusters. The result is a single output depicting +the variation across all conditions. @code{XINA} not only extracts +coabundance profiles within and across experiments, but also incorporates +protein-protein interaction databases and integrative resources such as +@dfn{Kyoto encyclopedia of genes and genomes} (KEGG) to infer interactors and +molecular functions, respectively, and produces intuitive graphical outputs.") + (license license:gpl3))) + +(define-public r-xmapbridge + (package + (name "r-xmapbridge") + (version "1.52.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "xmapbridge" version)) + (sha256 + (base32 "1zsqhisbq6f9qgw9f0a6ixxh635h3qm17117yfns5nnfw73ndlgi")))) + (properties `((upstream-name . "xmapbridge"))) + (build-system r-build-system) + (home-page "https://git.bioconductor.org/packages/xmapbridge") + (synopsis "Display numeric data in the web based genome browser X:MAP") + (description + "The package @code{xmapbridge} can plot graphs in the X:Map genome +browser. X:Map uses the Google Maps API to provide a scrollable view of the +genome. It supports a number of species, and can be accessed at +@url{http://xmap.picr.man.ac.uk}. This package exports plotting files in a +suitable format. Graph plotting in R is done using calls to the functions +@code{xmap.plot} and @code{xmap.points}, which have parameters that aim to be +similar to those used by the standard plot methods in R. These result in data +being written to a set of files (in a specific directory structure) that +contain the data to be displayed, as well as some additional meta-data +describing each of the graphs.") + (license license:lgpl3))) + (define-public r-xvector (package (name "r-xvector") @@ -7420,14 +7606,14 @@ to multiple hypothesis correction.") (define-public r-dose (package (name "r-dose") - (version "3.20.0") + (version "3.20.1") (source (origin (method url-fetch) (uri (bioconductor-uri "DOSE" version)) (sha256 (base32 - "0hj5hn54g8a3gj4q9200bffcy9m1mvkiwbg60ysv1hxxbpi57kmv")))) + "10kknaqz40pb6v0fcjzp12hfpi6k5kvlqnyxx1k3y0h0wdg8hs3n")))) (properties `((upstream-name . "DOSE"))) (build-system r-build-system) (propagated-inputs @@ -8791,14 +8977,14 @@ based on @dfn{Continuous Wavelet Transform} (CWT).") (define-public r-xcms (package (name "r-xcms") - (version "3.16.0") + (version "3.16.1") (source (origin (method url-fetch) (uri (bioconductor-uri "xcms" version)) (sha256 (base32 - "0m6w68ndf2a4k148pbb0bbbgq57akzqgi9nf7k6ngkk22j3m7m95")))) + "19kjyi6br9qp2pnp24shgbww3iqaaqxk9791w8w8qbd6sxijd143")))) (build-system r-build-system) (propagated-inputs `(("r-biobase" ,r-biobase) @@ -9837,7 +10023,6 @@ statistics to the plot.") ("r-flowviz" ,r-flowviz) ("r-graph" ,r-graph) ("r-mnormt" ,r-mnormt))) - #; (inputs `(("gsl" ,gsl))) (native-inputs @@ -10114,14 +10299,14 @@ self-organizing map clustering and minimal spanning trees.") (define-public r-mixomics (package (name "r-mixomics") - (version "6.18.0") + (version "6.18.1") (source (origin (method url-fetch) (uri (bioconductor-uri "mixOmics" version)) (sha256 (base32 - "0jwkb5scc33nfn2mibga8vp00pmc24ham71gpkbizvy43cy85icf")))) + "1wpskrnl2bry9m4k2djhjddcd8gpwf51gp5c3si1y7qxja78ql9f")))) (properties `((upstream-name . "mixOmics"))) (build-system r-build-system) (propagated-inputs @@ -11523,6 +11708,37 @@ visualization functions for compound clustering results and chemical structures.") (license license:artistic2.0))) +(define-public r-fmcsr + (package + (name "r-fmcsr") + (version "1.36.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "fmcsR" version)) + (sha256 + (base32 "0mshslfj7jsix1yc03s54spbbi56zspic49kfsjfv8npikj1i5w0")))) + (properties `((upstream-name . "fmcsR"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocgenerics" ,r-biocgenerics) + ("r-chemminer" ,r-chemminer) + ("r-runit" ,r-runit))) + (native-inputs `(("r-knitr" ,r-knitr))) + (home-page "https://github.com/girke-lab/fmcsR") + (synopsis "Mismatch tolerant maximum common substructure searching") + (description + "The fmcsR package introduces an efficient @dfn{maximum common +substructure} (MCS) algorithms combined with a novel matching strategy that +allows for atom and/or bond mismatches in the substructures shared among two +small molecules. The resulting flexible MCSs (FMCSs) are often larger than +strict MCSs, resulting in the identification of more common features in their +source structures, as well as a higher sensitivity in finding compounds with +weak structural similarities. The fmcsR package provides several utilities to +use the FMCS algorithm for pairwise compound comparisons, structure similarity +searching and clustering.") + (license license:artistic2.0))) + (define-public r-bioassayr (package (name "r-bioassayr") @@ -12379,13 +12595,13 @@ routines.") (define-public r-s4vectors (package (name "r-s4vectors") - (version "0.32.2") + (version "0.32.3") (source (origin (method url-fetch) (uri (bioconductor-uri "S4Vectors" version)) (sha256 (base32 - "0xrmii2dnwyknpjdiwwjlklgzpbk9q09br27rq5ffz08if9yyk20")))) + "0wp29v41f9cf6khq2ww0f63nsq6219l1ycajzdqp3a2xda734ncw")))) (properties `((upstream-name . "S4Vectors"))) (build-system r-build-system) @@ -14882,3 +15098,41 @@ and other associated metadata. De novo transcriptomes can be linked to the appropriate sources with linkedTxomes and shared for computational reproducibility.") (license license:gpl2))) + +(define-public r-phyloseq + (package + (name "r-phyloseq") + (version "1.38.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "phyloseq" version)) + (sha256 + (base32 "0k0aj8f7g1vr7l0qcc507b3w67zc1k9x7sdblm7mjb20zqr3916s")))) + (properties `((upstream-name . "phyloseq"))) + (build-system r-build-system) + (propagated-inputs + `(("r-ade4" ,r-ade4) + ("r-ape" ,r-ape) + ("r-biobase" ,r-biobase) + ("r-biocgenerics" ,r-biocgenerics) + ("r-biomformat" ,r-biomformat) + ("r-biostrings" ,r-biostrings) + ("r-cluster" ,r-cluster) + ("r-data-table" ,r-data-table) + ("r-foreach" ,r-foreach) + ("r-ggplot2" ,r-ggplot2) + ("r-igraph" ,r-igraph) + ("r-multtest" ,r-multtest) + ("r-plyr" ,r-plyr) + ("r-reshape2" ,r-reshape2) + ("r-scales" ,r-scales) + ("r-vegan" ,r-vegan))) + (native-inputs + `(("r-knitr" ,r-knitr))) + (home-page "https://github.com/joey711/phyloseq") + (synopsis "Handling and analysis of high-throughput microbiome census data") + (description + "Phyloseq provides a set of classes and tools to facilitate the import, +storage, analysis, and graphical display of microbiome census data.") + (license license:agpl3))) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index f8551b7723..48623d2cce 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -830,14 +830,18 @@ provides the Ribotaper pipeline.") `(#:python ,python-2 #:phases (modify-phases %standard-phases + ;; This test fails because of the matplotlib plotting backend. + (add-after 'unpack 'disable-plot-test + (lambda _ + (substitute* "src/ribodiff/functional_test_te.py" + (("pl\\.make_plots\\(data, opts\\)") "#")))) ;; Generate an installable executable script wrapper. (add-after 'unpack 'patch-setup.py (lambda _ (substitute* "setup.py" (("^(.*)packages=.*" line prefix) (string-append line "\n" - prefix "scripts=['scripts/TE.py'],\n"))) - #t))))) + prefix "scripts=['scripts/TE.py'],\n")))))))) (inputs `(("python-numpy" ,python2-numpy) ("python-matplotlib" ,python2-matplotlib) @@ -1013,7 +1017,7 @@ Python.") (define-public python-biom-format (package (name "python-biom-format") - (version "2.1.7") + (version "2.1.10") (source (origin (method git-fetch) @@ -1025,18 +1029,21 @@ Python.") (file-name (git-file-name name version)) (sha256 (base32 - "1rna16lyk5aqhnv0dp77wwaplias93f1vw28ad3jmyw6hwkai05v")) + "0i62j6ksmp78ap2dnl969gq6vprc3q87zc8ksj9if8g2603iq6i8")) (modules '((guix build utils))) - (snippet '(begin - ;; Delete generated C files. - (for-each delete-file (find-files "." "\\.c")) - #t)))) + ;; Delete generated C files. + (snippet + '(for-each delete-file (find-files "." "\\.c"))))) (build-system python-build-system) (arguments `(#:phases (modify-phases %standard-phases (add-after 'unpack 'use-cython - (lambda _ (setenv "USE_CYTHON" "1") #t)) + (lambda _ (setenv "USE_CYTHON" "1"))) + (add-after 'unpack 'relax + (lambda _ + (substitute* "setup.py" + (("pytest < 5.3.4") "pytest")))) (add-after 'unpack 'disable-broken-tests (lambda _ (substitute* "biom/tests/test_cli/test_validate_table.py" @@ -1048,24 +1055,22 @@ Python.") (("^(.+)def test_from_hdf5_issue_731" m indent) (string-append indent "@npt.dec.skipif(True, msg='Guix')\n" - m))) - #t)) + m))))) + (add-before 'reset-gzip-timestamps 'make-files-writable (lambda* (#:key outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out"))) (for-each (lambda (file) (chmod file #o644)) - (find-files out "\\.gz")) - #t)))))) + (find-files out "\\.gz")))))))) (propagated-inputs - `(("python-numpy" ,python-numpy) + `(("python-anndata" ,python-anndata) + ("python-numpy" ,python-numpy) ("python-scipy" ,python-scipy) ("python-flake8" ,python-flake8) ("python-future" ,python-future) ("python-click" ,python-click) ("python-h5py" ,python-h5py) - ;; FIXME: Upgrade to pandas 1.0 when - ;; https://github.com/biocore/biom-format/issues/837 is resolved. - ("python-pandas" ,python-pandas-0.25))) + ("python-pandas" ,python-pandas))) (native-inputs `(("python-cython" ,python-cython) ("python-pytest" ,python-pytest) @@ -1078,23 +1083,7 @@ Python.") representing counts of observations e.g. operational taxonomic units, KEGG orthology groups or lipid types, in one or more biological samples e.g. microbiome samples, genomes, metagenomes.") - (license license:bsd-3) - (properties `((python2-variant . ,(delay python2-biom-format)))))) - -(define-public python2-biom-format - (let ((base (package-with-python2 (strip-python2-variant python-biom-format)))) - (package - (inherit base) - (arguments - (substitute-keyword-arguments (package-arguments base) - ((#:phases phases) - `(modify-phases ,phases - ;; Do not require the unmaintained pyqi library. - (add-after 'unpack 'remove-pyqi - (lambda _ - (substitute* "setup.py" - (("install_requires.append\\(\"pyqi\"\\)") "pass")) - #t))))))))) + (license license:bsd-3))) (define-public python-pairtools (package @@ -2690,77 +2679,6 @@ gene predictor designed to work with assembled, aligned RNA-seq transcripts.") (home-page "https://sourceforge.net/projects/codingquarry/") (license license:gpl3+))) -(define-public couger - (package - (name "couger") - (version "1.8.2") - (source (origin - (method url-fetch) - (uri (string-append - "http://couger.oit.duke.edu/static/assets/COUGER" - version ".zip")) - (sha256 - (base32 - "04p2b14nmhzxw5h72mpzdhalv21bx4w9b87z0wpw0xzxpysyncmq")))) - (build-system gnu-build-system) - (arguments - `(#:tests? #f - #:phases - (modify-phases %standard-phases - (delete 'configure) - (delete 'build) - (replace - 'install - (lambda* (#:key outputs #:allow-other-keys) - (let* ((out (assoc-ref outputs "out")) - (bin (string-append out "/bin"))) - (copy-recursively "src" (string-append out "/src")) - (mkdir bin) - ;; Add "src" directory to module lookup path. - (substitute* "couger" - (("from argparse") - (string-append "import sys\nsys.path.append(\"" - out "\")\nfrom argparse"))) - (install-file "couger" bin)) - #t)) - (add-after - 'install 'wrap-program - (lambda* (#:key inputs outputs #:allow-other-keys) - ;; Make sure 'couger' runs with the correct PYTHONPATH. - (let* ((out (assoc-ref outputs "out")) - (path (getenv "GUIX_PYTHONPATH"))) - (wrap-program (string-append out "/bin/couger") - `("GUIX_PYTHONPATH" ":" prefix (,path)))) - #t))))) - (inputs - `(("python" ,python-2) - ("python2-pillow" ,python2-pillow) - ("python2-numpy" ,python2-numpy) - ("python2-scipy" ,python2-scipy) - ("python2-matplotlib" ,python2-matplotlib))) - (propagated-inputs - `(("r-minimal" ,r-minimal) - ("libsvm" ,libsvm) - ("randomjungle" ,randomjungle))) - (native-inputs - `(("unzip" ,unzip))) - (home-page "http://couger.oit.duke.edu") - (synopsis "Identify co-factors in sets of genomic regions") - (description - "COUGER can be applied to any two sets of genomic regions bound by -paralogous TFs (e.g., regions derived from ChIP-seq experiments) to identify -putative co-factors that provide specificity to each TF. The framework -determines the genomic targets uniquely-bound by each TF, and identifies a -small set of co-factors that best explain the in vivo binding differences -between the two TFs. - -COUGER uses classification algorithms (support vector machines and random -forests) with features that reflect the DNA binding specificities of putative -co-factors. The features are generated either from high-throughput TF-DNA -binding data (from protein binding microarray experiments), or from large -collections of DNA motifs.") - (license license:gpl3+))) - (define-public clustal-omega (package (name "clustal-omega") @@ -5070,23 +4988,26 @@ command, or queried for specific k-mers with @code{jellyfish query}.") (("# libraries = z,bz2") "libraries = z,bz2") (("include:third-party/zlib:third-party/bzip2") - "include:")) - #t)))) + "include:")))))) (build-system python-build-system) (arguments `(#:phases (modify-phases %standard-phases (add-after 'unpack 'set-cc - (lambda _ (setenv "CC" "gcc") #t)) - + (lambda _ (setenv "CC" "gcc"))) + (add-after 'unpack 'python-3.8-compatibility + (lambda _ + ;; Python 3.8 removed time.clock(). + (substitute* "sandbox/sweep-reads.py" + (("time\\.clock") + "time.process_time")))) (add-before 'reset-gzip-timestamps 'make-files-writable (lambda* (#:key outputs #:allow-other-keys) ;; Make sure .gz files are writable so that the ;; 'reset-gzip-timestamps' phase can do its work. (let ((out (assoc-ref outputs "out"))) (for-each make-file-writable - (find-files out "\\.gz$")) - #t)))))) + (find-files out "\\.gz$")))))))) (native-inputs `(("python-cython" ,python-cython) ("python-pytest" ,python-pytest) @@ -7764,12 +7685,27 @@ single cell ATAC-seq sequencing data.") (base32 "0bjzamdw2lcfhlbzc0vdva87c3wwnij8jsvnrpx4wyyxvpcz13m5")))) (properties `((upstream-name . "umi4cPackage"))) (build-system r-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'fix-references + (lambda _ + (substitute* "inst/conf/paths.conf" + (("TG3C\\.bowtie2_bin=.*") + (string-append "TG3C.bowtie2_bin=" + (which "bowtie2") "\n"))) + (substitute* "inst/perl/map3c/TG3C/import3C.pl" + (("\"perl") + (string-append "\"" (which "perl"))))))))) + (inputs + `(("perl" ,perl) + ("bowtie" ,bowtie))) (propagated-inputs `(("r-misha" ,r-misha) ("r-zoo" ,r-zoo))) (native-inputs `(("r-knitr" ,r-knitr))) (home-page "https://github.com/tanaylab/umi4cpackage") - (synopsis "Processing and analysis of UMI-4C contact profiles.") + (synopsis "Processing and analysis of UMI-4C contact profiles") (description "This is a package that lets you process UMI-4C data from scratch to produce nice plots.") (license license:expat)))) @@ -8134,29 +8070,27 @@ Needleman-Wunsch).") (define-public pardre (package (name "pardre") - ;; The source of 1.1.5 changed in place, so we append "-1" to the version. - (version "1.1.5-1") + (version "2.2.5") (source (origin (method url-fetch) (uri (string-append "mirror://sourceforge/pardre/ParDRe-rel" - "1.1.5" ".tar.gz")) + version ".tar.gz")) (sha256 (base32 - "17j73nc0viq4f6qj50nrndsrif5d6b71q8fl87m54psiv0ilns2b")))) + "105s4f8zs8hh0sc32r9p725n7idza9cj5jvp5z1m5pljjhgk3if5")))) (build-system gnu-build-system) (arguments - `(#:tests? #f ; no tests included + `(#:tests? #f ; tests require "prove" #:phases (modify-phases %standard-phases (delete 'configure) (replace 'install (lambda* (#:key outputs #:allow-other-keys) (let ((bin (string-append (assoc-ref outputs "out") "/bin"))) - (install-file "ParDRe" bin) - #t)))))) + (install-file "ParDRe" bin))))))) (inputs - `(("openmpi" ,openmpi) + `(("openmpi-c++" ,openmpi-c++) ("zlib" ,zlib))) (synopsis "Parallel tool to remove duplicate DNA reads") (description @@ -9388,7 +9322,7 @@ programs for inferring phylogenies (evolutionary trees).") (define-public imp (package (name "imp") - (version "2.13.0") + (version "2.15.0") (source (origin (method url-fetch) @@ -9396,7 +9330,7 @@ programs for inferring phylogenies (evolutionary trees).") version "/download/imp-" version ".tar.gz")) (sha256 (base32 - "1z1vcpwbylixk0zywngg5iw0jv083jj1bqphi817jpg3fb9fx2jj")))) + "05hsrnkpkajppa3f45x4qsarnkj616hlby749zxg4is3bv4i6b5y")))) (build-system cmake-build-system) (arguments `( ;; CMake 3.17 or newer is required for the CMAKE_TEST_ARGUMENTS used @@ -9409,7 +9343,9 @@ programs for inferring phylogenies (evolutionary trees).") "IMP.parallel-test_sge.py" ;fail in build container ;; The following test fails non-reproducibly on ;; an inexact numbers assertion. - "IMP.em-medium_test_local_fitting.py"))) + "IMP.em-medium_test_local_fitting.py" + ;; The following test fails for unknown reasons + "IMP.foxs-add-missing-residues.py"))) (list (string-append "-DCMAKE_CTEST_ARGUMENTS=" @@ -10321,6 +10257,46 @@ graphs. This library makes it easy to work with @file{.loom} files for single-cell RNA-seq data.") (license license:bsd-3))) +(define-public python-biothings-client + (package + (name "python-biothings-client") + (version "0.2.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "biothings_client" version)) + (sha256 + (base32 "0bccs37d5saxn5xsd2rfpkrnc5a120xs3ibizai66fgvp1vxbnc4")))) + (build-system python-build-system) + (arguments `(#:tests? #false)) ; require internet access + (propagated-inputs `(("python-requests" ,python-requests))) + (home-page "https://github.com/biothings/biothings_client.py") + (synopsis "Python client for BioThings API services") + (description "This package provides a Python client for BioThings +API services.") + (license license:bsd-3))) + +(define-public python-mygene + (package + (name "python-mygene") + (version "3.2.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "mygene" version)) + (sha256 + (base32 "1snszwdgfygchxshcbry3b5pbcw3g1isp8dw46razxccqaxwlag7")))) + (build-system python-build-system) + (propagated-inputs + `(("python-biothings-client" ,python-biothings-client))) + (home-page "https://github.com/biothings/mygene.py") + (synopsis "Python Client for MyGene.Info services.") + (description "MyGene.Info provides simple-to-use REST web services +to query/retrieve gene annotation data. It's designed with simplicity +and performance emphasized. Mygene is a Python wrapper to access +MyGene.Info services.") + (license license:bsd-3))) + ;; We cannot use the latest commit because it requires Java 9. (define-public java-forester (let ((commit "86b07efe302d5094b42deed9260f719a4c4ac2e6") @@ -11181,7 +11157,7 @@ based methods.") (define-public pigx-sars-cov2-ww (package (name "pigx-sars-cov2-ww") - (version "0.0.3") + (version "0.0.4") (source (origin (method url-fetch) (uri (string-append "https://github.com/BIMSBbioinfo/pigx_sarscov2_ww/" @@ -11189,7 +11165,7 @@ based methods.") "/pigx_sars-cov2-ww-" version ".tar.gz")) (sha256 (base32 - "1hhdbwsnl0d37lrmisw5hr630xr8s41qvxflm05anh11rj8n22yw")) + "0axnmz4d8zgir888mc0cilcq4m3v41xmjmpp3w3444lciwnxydvs")) (patches (search-patches "pigx-sars-cov2-ww-no-citeproc.patch")))) (build-system gnu-build-system) (arguments @@ -11203,9 +11179,13 @@ based methods.") ("autoconf" ,autoconf))) (inputs `(("bash-minimal" ,bash-minimal) + ("bbmap" ,bbmap) + ("bedtools" ,bedtools) ("bwa" ,bwa) ("ensembl-vep" ,ensembl-vep) + ("fastp" ,fastp) ("fastqc" ,fastqc) + ("ivar" ,ivar) ("kraken2" ,kraken2) ("krona-tools" ,krona-tools) ("lofreq" ,lofreq) @@ -11221,6 +11201,7 @@ based methods.") ("r-minimal" ,r-minimal) ("r-plotly" ,r-plotly) ("r-qpcr" ,r-qpcr) + ("r-r-utils" ,r-r-utils) ("r-reshape2" ,r-reshape2) ("r-rmarkdown" ,r-rmarkdown) ("r-stringr" ,r-stringr) @@ -11393,7 +11374,7 @@ version does count multisplits.") (define-public minimap2 (package (name "minimap2") - (version "2.18") + (version "2.23") (source (origin (method url-fetch) @@ -11402,7 +11383,7 @@ version does count multisplits.") "minimap2-" version ".tar.bz2")) (sha256 (base32 - "1d7fvdqcqd6wns875rkyd7f34ii15gc9l1sivd2wbbpcb0fi0mbs")))) + "00ngbz1swcgxk5apx9dz5xkh1z8abdpysx5lc7w8fbrfxp41w0j0")))) (build-system gnu-build-system) (arguments `(#:tests? #f ; there are none @@ -13824,10 +13805,47 @@ vast-tools, an RNA-Seq pipeline for alternative splicing analysis. The plots are generated using @code{ggplot2}.") (license license:expat))) +(define-public vbz-compression + (package + (name "vbz-compression") + (version "1.0.1") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/nanoporetech/vbz_compression/") + (commit (string-append "v" version)) + ;; We include the streamvbyte sources + (recursive? #true))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1c6wsrnw03vsc5cfp2rdakly5xy55m9chjmy6v685yapdwirdky0")))) + (build-system cmake-build-system) + (arguments + `(#:configure-flags + '("-DENABLE_CONAN=OFF" + ;; Python things aren't even installed, so we might as well + ;; disable building them. + "-DENABLE_PYTHON=OFF"))) + (inputs + `(;("hdf5" ,hdf5-1.10) + ("zstd" ,zstd "lib"))) + (native-inputs + `(("googlebenchmark" ,googlebenchmark))) + (home-page "https://github.com/nanoporetech/vbz_compression/") + (synopsis "VBZ compression plugin for nanopore signal data") + (description + "VBZ Compression uses variable byte integer encoding to compress +nanopore signal data. The performance of VBZ is achieved by taking +advantage of the properties of the raw signal and therefore is most +effective when applied to the signal dataset.") + (license license:mpl2.0))) + (define-public python-ont-fast5-api (package (name "python-ont-fast5-api") - (version "1.4.4") + (version "4.0.0") (source (origin (method git-fetch) @@ -13837,12 +13855,27 @@ are generated using @code{ggplot2}.") (file-name (git-file-name name version)) (sha256 (base32 - "03cbq4zbbwhll8ml2m9k8sa31mirsvcbjkrq1yna0kkzz9fad5fm")))) + "01hj4751j424lzic2sc4bz1f8w7i7fpkjpy3rgghdyl5lyfyb4s4")) + (modules '((guix build utils))) + (snippet + '(delete-file-recursively "ont_fast5_api/vbz_plugin")))) (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'copy-plugin + (lambda* (#:key inputs #:allow-other-keys) + (mkdir-p "ont_fast5_api/vbz_plugin/") + (install-file (string-append + (assoc-ref inputs "vbz-compression") + "/hdf5/lib/plugin/libvbz_hdf_plugin.so") + "ont_fast5_api/vbz_plugin/")))))) + (inputs + `(("vbz-compression" ,vbz-compression))) (propagated-inputs `(("python-numpy" ,python-numpy) - ("python-six" ,python-six) ("python-h5py" ,python-h5py) + ("python-packaging" ,python-packaging) ("python-progressbar33" ,python-progressbar33))) (home-page "https://github.com/nanoporetech/ont_fast5_api") (synopsis "Interface to HDF5 files of the Oxford Nanopore fast5 file format") @@ -14814,6 +14847,7 @@ usually ignored by other methods or only used for filtering.") (base32 "044xa0hm3b8fga64csrdx05ih8w7kwmvcdrdrhkg8j11ml4bi4xv")))) (build-system gnu-build-system) + (arguments `(#:parallel-tests? #false)) ; not supported (inputs `(("htslib" ,htslib) ("zlib" ,zlib))) diff --git a/gnu/packages/bootloaders.scm b/gnu/packages/bootloaders.scm index 6d1fec3fcb..c3c3ec14b9 100644 --- a/gnu/packages/bootloaders.scm +++ b/gnu/packages/bootloaders.scm @@ -509,6 +509,12 @@ tree binary files. These are board description files used by Linux and BSD.") ;; https://lists.denx.de/pipermail/u-boot/2021-October/462728.html (search-patch "u-boot-allow-disabling-openssl.patch")) +(define %u-boot-rk3399-enable-emmc-phy-patch + ;; Fix emmc boot on rockpro64 and pinebook-pro, this was a regression + ;; therefore should hopefully be fixed when updating u-boot. + ;; https://lists.denx.de/pipermail/u-boot/2021-November/466329.html + (search-patch "u-boot-rk3399-enable-emmc-phy.patch")) + (define u-boot (package (name "u-boot") @@ -517,7 +523,8 @@ tree binary files. These are board description files used by Linux and BSD.") (patches (list %u-boot-rockchip-inno-usb-patch %u-boot-allow-disabling-openssl-patch - %u-boot-sifive-prevent-relocating-initrd-fdt)) + %u-boot-sifive-prevent-relocating-initrd-fdt + %u-boot-rk3399-enable-emmc-phy-patch)) (method url-fetch) (uri (string-append "https://ftp.denx.de/pub/u-boot/" diff --git a/gnu/packages/busybox.scm b/gnu/packages/busybox.scm index 5b038870de..f3652813ed 100644 --- a/gnu/packages/busybox.scm +++ b/gnu/packages/busybox.scm @@ -122,7 +122,7 @@ any small or embedded system.") (define-public toybox (package (name "toybox") - (version "0.8.3") + (version "0.8.5") (source (origin (method url-fetch) (uri (string-append @@ -130,7 +130,7 @@ any small or embedded system.") version ".tar.gz")) (sha256 (base32 - "00aw9d809wj1bqlb2fsssdgz7rj0363ya14py0gfdm0rkp98zcpa")))) + "0j896rblxd8jyll6dg1w9zz1v1q52y2ca7qswgvlfqvjhz0k1lmz")))) (build-system gnu-build-system) (arguments `(#:phases @@ -138,10 +138,19 @@ any small or embedded system.") (add-before 'configure 'set-environment-variables (lambda _ (setenv "CC" ,(cc-for-target)) - (setenv "HOSTCC" (which "gcc")) - #t)) + (setenv "HOSTCC" (which "gcc")))) (replace 'configure (lambda _ (invoke "make" "defconfig"))) + (add-before 'check 'fix-or-skip-broken-tests + (lambda _ + ;; Some tests expects $USER to magically be the current user name. + (setenv "USER" (passwd:name (getpwnam (geteuid)))) + ;; All these expect directories to be exactly 4K. They aren't! + (delete-file "tests/du.test") + ;; Delete tests that expect a root or 0 user to exist. + (substitute* "tests/id.test" + (("^testing .*[ \\(]root.*") "")) + )) (replace 'install (lambda* (#:key outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out"))) @@ -151,8 +160,7 @@ any small or embedded system.") (add-after 'install 'remove-usr-directory (lambda* (#:key outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out"))) - (delete-file-recursively (string-append out "/usr")) - #t)))) + (delete-file-recursively (string-append out "/usr")))))) #:test-target "tests")) (native-inputs `(("bc" ,bc))) (synopsis "Many common UNIX utilities in a single executable") diff --git a/gnu/packages/ci.scm b/gnu/packages/ci.scm index 95daa67450..652722c74a 100644 --- a/gnu/packages/ci.scm +++ b/gnu/packages/ci.scm @@ -73,8 +73,8 @@ (file-name (string-append name "-" version "-checkout"))))))) (define-public cuirass - (let ((commit "ea09658f13b3f440c2c755882fdfc7459a5d90fa") - (revision "5")) + (let ((commit "df8837ce3eedc5d47ec6f3a0088e2c7044087b1c") + (revision "6")) (package (name "cuirass") (version (git-version "1.1.0" revision commit)) @@ -87,7 +87,7 @@ (file-name (git-file-name name version)) (sha256 (base32 - "18w46v46rbibrkhp4ias1ns636f1dds0vv143x7fcchrw01hk71y")))) + "1r2gqigp3vlr5i1nqq9bhgmdzs54awr4iqyrr2nq7s5ml4yivn8y")))) (build-system gnu-build-system) (arguments `(#:modules ((guix build utils) diff --git a/gnu/packages/cluster.scm b/gnu/packages/cluster.scm index eef6527f6f..3043760830 100644 --- a/gnu/packages/cluster.scm +++ b/gnu/packages/cluster.scm @@ -42,14 +42,14 @@ (define-public drbd-utils (package (name "drbd-utils") - (version "9.19.0") + (version "9.19.1") (source (origin (method url-fetch) (uri (list (string-append "https://pkg.linbit.com/downloads/drbd" "/utils/drbd-utils-" version ".tar.gz"))) (sha256 (base32 - "1bbw91hil55d2047r2bdhx2daxc1wqysra2qqm77iy1hcvnvy9rq")) + "1l99kcrb0j85wxxmrdihpx9bk1a4sdi7wlp5m1x5l24k8ck1m5cf")) (modules '((guix build utils))) (snippet '(begin diff --git a/gnu/packages/code.scm b/gnu/packages/code.scm index cdd9e3306b..3720383664 100644 --- a/gnu/packages/code.scm +++ b/gnu/packages/code.scm @@ -68,6 +68,7 @@ #:use-module (gnu packages serialization) #:use-module (gnu packages sqlite) #:use-module (gnu packages texinfo) + #:use-module (gnu packages tls) #:use-module (gnu packages web) #:use-module (gnu packages xml)) @@ -575,31 +576,32 @@ results and determine build stability.") (define-public kcov (package (name "kcov") - (version "38") + (version "39") (source (origin (method git-fetch) (uri (git-reference (url "https://github.com/SimonKagstrom/kcov") - (commit version))) + (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 (base32 - "0zqg21xwivi16csl6a5wby6679ny01bjaw4am3y4qcgjdyihifp8")))) + "09wf1k4dlpdhqjjgq2bibmgy8i3z32wf0zxhd2px2dvg92m4zwqr")))) (build-system cmake-build-system) (arguments - `(#:tests? #f ;no test target + `(#:tests? #f ; no test target #:phases (modify-phases %standard-phases (add-after 'unpack 'fix-/bin/bash-references - (lambda _ + (lambda* (#:key inputs #:allow-other-keys) + (let ((bash (assoc-ref inputs "bash"))) (substitute* (find-files "src" ".*\\.cc?$") - (("/bin/bash") (which "bash")) - (("/bin/sh") (which "sh"))) - #t))))) + (("/bin/(bash|sh)" shell) + (string-append (assoc-ref inputs "bash") shell))))))))) (inputs `(("curl" ,curl) ("elfutils" ,elfutils) ("libelf" ,libelf) + ("openssl" ,openssl) ("zlib" ,zlib))) (native-inputs `(("python" ,python))) @@ -748,7 +750,7 @@ independent targets.") (define-public uncrustify (package (name "uncrustify") - (version "0.69.0") + (version "0.74.0") (source (origin (method git-fetch) (uri (git-reference @@ -757,11 +759,10 @@ independent targets.") (file-name (git-file-name name version)) (sha256 (base32 - "0sqrg13kp8fwymq40976bq380bzw40g4ss7ihlbq45d0f90ifa1k")))) + "0v48vhmzxjzysbf0vhxzayl2pkassvbabvwg84xd6b8n5i74ijxd")))) (build-system cmake-build-system) (native-inputs - `(("unzip" ,unzip) - ("python" ,python-wrapper))) + `(("python" ,python-wrapper))) (arguments `(#:phases (modify-phases %standard-phases diff --git a/gnu/packages/compression.scm b/gnu/packages/compression.scm index fb352431f7..5fe559e294 100644 --- a/gnu/packages/compression.scm +++ b/gnu/packages/compression.scm @@ -34,6 +34,7 @@ ;;; Copyright © 2021 Vincent Legoll <vincent.legoll@gmail.com> ;;; Copyright © 2021 Simon Tournier <zimon.toutoune@gmail.com> ;;; Copyright © 2021 Maxim Cournoyer <maxim.cournoyer@gmail.com> +;;; Copyright © 2021 Ahmad Jarara <git@ajarara.io> ;;; ;;; This file is part of GNU Guix. ;;; @@ -859,7 +860,7 @@ time for compression ratio.") (define-public squashfs-tools (package (name "squashfs-tools") - (version "4.4-git.1") ; ‘A point release of […] 4.4’ + (version "4.5") (source (origin (method git-fetch) @@ -868,7 +869,7 @@ time for compression ratio.") (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "1hb95iy445hs2p3f7hg51jkrpkfi3bphddk60p2la0qmcdjkgbbm")))) + (base32 "18d4nwa22vgb8j2badngjngw63f0lj501cvlh3920wqy2mqxwav6")))) (build-system gnu-build-system) (arguments `(#:tests? #f ; no check target @@ -2283,7 +2284,7 @@ reading from and writing to ZIP archives. ") (package (inherit quazip-0) (name "quazip") - (version "1.1") + (version "1.2") (source (origin (method git-fetch) @@ -2292,7 +2293,7 @@ reading from and writing to ZIP archives. ") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "06srglrj6jvy5ngmidlgx03i0d5w91yhi7sf846wql00v8rvhc5h")))))) + (base32 "1dwld7jxhjz9l33lrqwvklazdy7ygi6n1m4ry1n1sk5dnschrhby")))))) (define-public zchunk (package @@ -2673,3 +2674,36 @@ resulting multimember tar.lz archive is fully backward compatible with standard tar tools like GNU tar, which treat it like any other tar.lz archive. Tarlz can append files to the end of such compressed archives.") (license license:gpl2+))) + +(define-public libcbor + (package + (name "libcbor") + (version "0.8.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/PJK/libcbor") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 (base32 "01dv4vxcmbvpphqy16vqiwh25wx11x630js5wfnx7cryarsh9ld7")))) + (build-system cmake-build-system) + (arguments + '(#:configure-flags + (let* ((out (assoc-ref %outputs "out")) + (lib (string-append out "/lib"))) + (list + "-DCMAKE_BUILD_TYPE=Release" + "-DBUILD_SHARED_LIBS=ON" + "-DCBOR_CUSTOM_ALLOC=ON" + (string-append "-DCMAKE_INSTALL_LIBDIR=" lib) + (string-append "-DCMAKE_INSTALL_RPATH=" lib))))) + (synopsis "The C library for parsing and generating CBOR") + (description + "The Concise Binary Object Representation (CBOR) is a data format whose +design goals include the possibility of extremely small code size, fairly +small message size, and extensibility without the need for version +negotiation. These design goals make it different from earlier binary +serializations such as ASN.1 and MessagePack.") + (license license:expat) + (home-page "https://github.com/PJK/libcbor"))) diff --git a/gnu/packages/coq.scm b/gnu/packages/coq.scm index a27ec53ecb..cf0c67f214 100644 --- a/gnu/packages/coq.scm +++ b/gnu/packages/coq.scm @@ -49,10 +49,10 @@ #:use-module (guix utils) #:use-module ((srfi srfi-1) #:hide (zip))) -(define-public coq +(define-public coq-core (package - (name "coq") - (version "8.13.2") + (name "coq-core") + (version "8.14.0") (source (origin (method git-fetch) @@ -62,25 +62,31 @@ (file-name (git-file-name name version)) (sha256 (base32 - "15r0cm3p9dlsxbg0lf05njjp1xi1y74vxvq6drxjykax67x95l8a")))) + "0iachapmdwvwwlvkrb2yxhqqrgzs70zyr1c9v1jdb1awx3bp68hf")) + (patches (search-patches "coq-fix-envvars.patch")))) (native-search-paths (list (search-path-specification (variable "COQPATH") - (files (list "lib/coq/user-contrib"))) + (files (list "lib/ocaml/site-lib/coq/user-contrib" + "lib/coq/user-contrib"))) + (search-path-specification + (variable "COQLIBPATH") + (files (list "lib/ocaml/site-lib/coq"))) (search-path-specification - (variable "COQLIB") - (files (list "lib/ocaml/site-lib/coq")) + (variable "COQCORELIB") + (files (list "lib/ocaml/site-lib/coq-core")) (separator #f)))) (build-system dune-build-system) (inputs `(("gmp" ,gmp) ("ocaml-zarith" ,ocaml-zarith))) (native-inputs - `(("which" ,which))) + `(("ocaml-ounit2" ,ocaml-ounit2) + ("which" ,which))) (arguments - `(#:package "coq" - #:test-target "test-suite")) - (properties '((upstream-name . "coq"))) ; for inherited packages + `(#:package "coq-core" + #:test-target ".")) + (properties '((upstream-name . "coq"))) ; also for inherited packages (home-page "https://coq.inria.fr") (synopsis "Proof assistant for higher-order logic") (description @@ -91,6 +97,31 @@ It is developed using Objective Caml and Camlp5.") ;; Some of the documentation is distributed under opl1.0+. (license (list license:lgpl2.1 license:opl1.0+)))) +(define-public coq-stdlib + (package + (inherit coq-core) + (name "coq-stdlib") + (arguments + `(#:package "coq-stdlib" + #:test-target ".")) + (inputs + `(("coq-core" ,coq-core) + ("gmp" ,gmp) + ("ocaml-zarith" ,ocaml-zarith))) + (native-inputs '()))) + +(define-public coq + (package + (inherit coq-core) + (name "coq") + (arguments + `(#:package "coq" + #:test-target ".")) + (propagated-inputs + `(("coq-core" ,coq-core) + ("coq-stdlib" ,coq-stdlib))) + (native-inputs '()))) + (define-public coq-ide-server (package (inherit coq) @@ -119,9 +150,9 @@ It is developed using Objective Caml and Camlp5.") (define-public proof-general ;; The latest release is from 2016 and there has been more than 450 commits ;; since then. - ;; Commit from 2021-06-07. - (let ((commit "bc86736abb728ec0d28abc90ef0adae21d29a66a") - (revision "0")) + ;; Commit from 2021-11-25. + (let ((commit "1b1083e86e0cddc20ff2f1a6b25c7a7eee2edf02") + (revision "1")) (package (name "proof-general") (version (git-version "4.4" revision commit)) @@ -133,7 +164,7 @@ It is developed using Objective Caml and Camlp5.") (file-name (git-file-name name version)) (sha256 (base32 - "00cga3n9nj2xa3ivb0fdkkdx3k11fp4879y188738631yd1x2lsa")))) + "1pnysczhscapgwmvf6ix7f31lf3hnh8h977bfll1m7jlxl9b9c0j")))) (build-system gnu-build-system) (native-inputs `(("emacs" ,emacs-minimal) @@ -201,7 +232,7 @@ It is developed using Objective Caml and Camlp5.") "Proof General is a major mode to turn Emacs into an interactive proof assistant to write formal mathematical proofs using a variety of theorem provers.") - (license license:gpl2+)))) + (license license:gpl3+)))) (define-public coq-flocq (package @@ -410,7 +441,7 @@ theorems between the two libraries.") (define-public coq-bignums (package (name "coq-bignums") - (version "8.13.0") + (version "8.14.0") (source (origin (method git-fetch) (uri (git-reference @@ -419,7 +450,7 @@ theorems between the two libraries.") (file-name (git-file-name name version)) (sha256 (base32 - "1n66i7hd9222b2ks606mak7m4f0dgy02xgygjskmmav6h7g2sx7y")))) + "0jsgdvj0ddhkls32krprp34r64y1rb5mwxl34fgaxk2k4664yq06")))) (build-system gnu-build-system) (native-inputs `(("ocaml" ,ocaml) @@ -537,16 +568,16 @@ uses Ltac to synthesize the substitution operation.") (define-public coq-equations (package (name "coq-equations") - (version "1.2.4") + (version "1.3") (source (origin (method git-fetch) (uri (git-reference (url "https://github.com/mattam82/Coq-Equations") - (commit (string-append "v" version "-8.13")))) + (commit (string-append "v" version "-8.14")))) (file-name (git-file-name name version)) (sha256 (base32 - "0i014lshsdflzw6h0qxra9d2f0q82vffxv2f29awbb9ad0p4rq4q")))) + "19bj9nncd1r9g4273h5qx35gs3i4bw5z9bhjni24b413hyj55hkv")))) (build-system gnu-build-system) (native-inputs `(("ocaml" ,ocaml) @@ -576,7 +607,7 @@ kernel.") (define-public coq-semantics (package (name "coq-semantics") - (version "8.13.0") + (version "8.14.0") (source (origin (method git-fetch) @@ -591,7 +622,7 @@ kernel.") (file-name (git-file-name name version)) (sha256 (base32 - "0m5si9dsv96z92gy4xaqz8mzyz8zp7j1sp542l0wzsp5xgyfpc7i")))) + "0ldrp86bfcjpzsb08p45sgs3aczjzr1gksy5dsf7pxapg05pc7ac")))) (build-system gnu-build-system) (native-inputs `(("coq" ,coq) diff --git a/gnu/packages/cpp.scm b/gnu/packages/cpp.scm index bb445d33c1..87bf66d1d1 100644 --- a/gnu/packages/cpp.scm +++ b/gnu/packages/cpp.scm @@ -490,7 +490,7 @@ tools (containers, algorithms) used by other QuantStack packages.") (define-public ccls (package (name "ccls") - (version "0.20201219") + (version "0.20210330") (source (origin (method git-fetch) @@ -498,7 +498,7 @@ tools (containers, algorithms) used by other QuantStack packages.") (url "https://github.com/MaskRay/ccls") (commit version))) (sha256 - (base32 "0nkg92rgb1x6scpiwdamfrd1ag87j7ajxyn5qi861r916m5mh9m8")) + (base32 "0zzdn7c7a244djqwcsd7rvgclcdacyf9d0vkxpfspl83k2554alf")) (file-name (git-file-name name version)))) (build-system cmake-build-system) (arguments @@ -1166,6 +1166,36 @@ output randomness while retaining speed, simplicity, and conciseness.") (home-page "https://www.pcg-random.org") (license (list license:expat license:asl2.0))))) ; dual licensed +(define-public libconfini + (package + (name "libconfini") + (version "1.16.3") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/madmurphy/libconfini") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "01g8ai2z4fwshk06k824j6ib8nfb3cwxs5kqpqjvv4k5ayzm892h")))) + (build-system gnu-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'bootstrap + (lambda _ (invoke "sh" "bootstrap" "--noconfigure")))))) + (native-inputs + `(("autoconf" ,autoconf) + ("automake" ,automake) + ("libtool" ,libtool))) + (home-page "https://madmurphy.github.io/libconfini/html/index.html") + (synopsis "INI file parser") + (description "@code{libconfini} is an INI file parser library written in +C. It focuses on standardization and parsing exactness and is at ease with +almost every type of file containing key/value pairs.") + (license license:gpl3+))) + (define-public libcutl (package (name "libcutl") @@ -1398,7 +1428,7 @@ syntax with variables, conditions, functions and more.") (define-public simdjson (package (name "simdjson") - (version "1.0.0") + (version "1.0.2") (source (origin (method git-fetch) (uri (git-reference @@ -1407,7 +1437,7 @@ syntax with variables, conditions, functions and more.") (file-name (git-file-name name version)) (sha256 (base32 - "08qpsw0i8481xlyyghzyszb1vh4c8i7krzzghvr9m4yg394vf6zn")))) + "05i5jnqd7ngps79cws16ls48gnx08ykkkib3n2hbrdhr1wwrnv7a")))) (build-system cmake-build-system) (arguments '(#:tests? #f ; tests require downloading dependencies diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 4c4530deb9..5efc49f079 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -473,14 +473,14 @@ degree elevation and curve fitting.") (define-public r-v8 (package (name "r-v8") - (version "3.4.2") + (version "3.6.0") (source (origin (method url-fetch) (uri (cran-uri "V8" version)) (sha256 (base32 - "1vfj89shfzx7b6papi2y671l8gksng775kilmqzl5gx87i3l61i1")))) + "0xqk4rcv255r2wll2jpzf9ix8j6hbhw0vbhg2g9i6z2apyc9i5m3")))) (properties `((upstream-name . "V8"))) (build-system r-build-system) (arguments @@ -582,6 +582,31 @@ ordered indexed observations. It is particularly aimed at irregular time series of numeric vectors/matrices and factors.") (license license:gpl2+))) +(define-public r-fontawesome + (package + (name "r-fontawesome") + (version "0.2.2") + (source + (origin + (method url-fetch) + (uri (cran-uri "fontawesome" version)) + (sha256 + (base32 "0r6zb5175cr4ybqj6bl0mbhadwv9xjxaf32yjc0y76rw3d6vcbap")))) + (properties `((upstream-name . "fontawesome"))) + (build-system r-build-system) + (propagated-inputs + `(("r-htmltools" ,r-htmltools) + ("r-rlang" ,r-rlang))) + (home-page "https://github.com/rstudio/fontawesome") + (synopsis "Easily work with Font Awesome icons") + (description + "Easily and flexibly insert Font Awesome icons into R Markdown documents +and Shiny apps. These icons can be inserted into HTML content through inline +SVG tags or @code{i} tags. There is also a utility function for exporting +Font Awesome icons as PNG images for those situations where raster graphics +are needed.") + (license license:expat))) + (define-public r-fingerprint (package (name "r-fingerprint") @@ -608,6 +633,28 @@ Currently handlers are provided for CDK, MOE and BCI fingerprint data.") ;; Any version of the GPL (license (list license:gpl2+ license:gpl3+)))) +(define-public r-fpeek + (package + (name "r-fpeek") + (version "0.1.2") + (source + (origin + (method url-fetch) + (uri (cran-uri "fpeek" version)) + (sha256 + (base32 "0kv46g21ndxchg3q8ynq7hjjkh6i2zlc21axn5y1jjzigrw047ii")))) + (properties `((upstream-name . "fpeek"))) + (build-system r-build-system) + (propagated-inputs `(("r-rcpp" ,r-rcpp))) + (home-page "https://github.com/davidgohel/fpeek") + (synopsis "Check text files content at a glance") + (description + "This package provides tools to help working with text files. It can +return the number of lines; print the first and last lines; convert encoding. +Operations are made without reading the entire file before starting, resulting +in good performances with large files.") + (license license:expat))) + (define-public r-ggalluvial (package (name "r-ggalluvial") @@ -707,13 +754,13 @@ axis} (SMA), and @dfn{ranged major axis} (RMA).") (define-public r-ggpmisc (package (name "r-ggpmisc") - (version "0.4.3") + (version "0.4.4") (source (origin (method url-fetch) (uri (cran-uri "ggpmisc" version)) (sha256 (base32 - "0ff84ybj4648c1v05ng3l62g9n52igjwvm320qkfbdzdxzncpzik")))) + "01dnr2a33zmgi0gjsxlcz4hp68b18xsi8z1lkhgcla5im59qf9xi")))) (build-system r-build-system) (propagated-inputs `(("r-dplyr" ,r-dplyr) @@ -1147,6 +1194,29 @@ for credentials or a passphrase, for example to authenticate with a server or read a protected key.") (license license:expat))) +(define-public r-astsa + (package + (name "r-astsa") + (version "1.14") + (source + (origin + (method url-fetch) + (uri (cran-uri "astsa" version)) + (sha256 + (base32 "09zx2q419p0b1c336ybh4i62v5dvn3sp39dxn5kwlrqchjj7f5z6")))) + (properties `((upstream-name . "astsa"))) + (build-system r-build-system) + (home-page "https://github.com/nickpoison/astsa/") + (synopsis "Applied statistical time series analysis") + (description + "This package provides data sets and scripts to accompany Time Series +Analysis and Its Applications: With R Examples (4th ed), by R.H. Shumway and +D.S. Stoffer. Springer Texts in Statistics, 2017, +@url{https://doi.org/10.1007/978-3-319-52452-8}, and Time Series: A Data +Analysis Approach Using R. Chapman-Hall, 2019, +@url{https://doi.org/10.1201/9780429273285}.") + (license license:gpl3))) + (define-public r-vegan (package (name "r-vegan") @@ -1592,13 +1662,13 @@ in systems and applications.") (define-public r-servr (package (name "r-servr") - (version "0.23") + (version "0.24") (source (origin (method url-fetch) (uri (cran-uri "servr" version)) (sha256 (base32 - "1f1fgfgjgjsbn2krkbyw2qwkm0k4lq9p9jakg9zwyqlgpkdd34j4")))) + "11x0857m3xzdbzr4z0vx4fcdk36arfagyf2qgamvprich0qisknr")))) (build-system r-build-system) (propagated-inputs `(("r-httpuv" ,r-httpuv) @@ -2055,7 +2125,7 @@ previewing themes in real time.") (define-public r-shiny (package (name "r-shiny") - (version "1.6.0") + (version "1.7.1") (source (origin (method git-fetch) @@ -2065,7 +2135,7 @@ previewing themes in real time.") (file-name (git-file-name name version)) (sha256 (base32 - "0f6cwx5xyqzs40msq271sqhwl8736rwbm7kd1ldkcvxngzr4vlx9")) + "0wvc6jlgs41p05wbk8gahnl7sfnc4hpliyh9dbi5w52ngsg6wcr7")) (snippet '(for-each delete-file '("inst/www/shared/bootstrap/js/bootstrap.min.js" @@ -2141,9 +2211,9 @@ previewing themes in real time.") ("r-cachem" ,r-cachem) ("r-commonmark" ,r-commonmark) ("r-crayon" ,r-crayon) - ("r-digest" ,r-digest) ("r-ellipsis" ,r-ellipsis) ("r-fastmap" ,r-fastmap) + ("r-fontawesome" ,r-fontawesome) ("r-glue" ,r-glue) ("r-htmltools" ,r-htmltools) ("r-httpuv" ,r-httpuv) @@ -2304,13 +2374,13 @@ application framework for R, making it easy to create attractive dashboards.") (define-public r-shinyfiles (package (name "r-shinyfiles") - (version "0.9.0") + (version "0.9.1") (source (origin (method url-fetch) (uri (cran-uri "shinyFiles" version)) (sha256 - (base32 "0rsijlx16vd74r7bd8s9zipy71kgpw19v9s85kxj5bmwc6njmbai")))) + (base32 "0f8dfdiar376lx0979ccyghgx5rhr08v5z3z60asrrjsxlq4cs85")))) (properties `((upstream-name . "shinyFiles"))) (build-system r-build-system) (propagated-inputs @@ -2635,14 +2705,14 @@ punctuation.") (define-public r-crosstalk (package (name "r-crosstalk") - (version "1.1.1") + (version "1.2.0") (source (origin (method url-fetch) (uri (cran-uri "crosstalk" version)) (sha256 (base32 - "1n6c6s7a6yxiwvva71x6bzcrim8xprl5s01fqiy61yq0y3vk8cpd")))) + "180y7mhpj17axpadwhh7s0qvrpdnag7g977vk256l96d6nmvlds2")))) (build-system r-build-system) (propagated-inputs `(("r-htmltools" ,r-htmltools) @@ -3016,14 +3086,14 @@ colors are provided.") (define-public r-glue (package (name "r-glue") - (version "1.4.2") + (version "1.5.0") (source (origin (method url-fetch) (uri (cran-uri "glue" version)) (sha256 (base32 - "1bgpirdvjrf0da734clrixawvpdap4lpda4g89vais96589m8wwz")))) + "1wjar579m46j1jnch34h7976sc1qbj6hzdyz5jm16nz1iw6z47jv")))) (build-system r-build-system) ;; knitr depends on glue, so we can't add knitr here to build the ;; vignettes. @@ -3531,14 +3601,14 @@ rows, dropping names) to see if the modified versions are identical.") (define-public r-dendextend (package (name "r-dendextend") - (version "1.15.1") + (version "1.15.2") (source (origin (method url-fetch) (uri (cran-uri "dendextend" version)) (sha256 (base32 - "0zf4w4rc2jj30i3x0m0gnkwidfmn3cvz1wirp20amq4v3n9420md")))) + "06wjs8451hmnimzgngpzbai3yrgy33133vzzapa8jib9crdqi8sb")))) (build-system r-build-system) (propagated-inputs `(("r-ggplot2" ,r-ggplot2) @@ -3610,14 +3680,14 @@ any subsequent lookup as it keeps the hash table in memory.") (define-public r-ff (package (name "r-ff") - (version "4.0.4") + (version "4.0.5") (source (origin (method url-fetch) (uri (cran-uri "ff" version)) (sha256 (base32 - "1rfj2ff5cxzdp9nvfnbgmswc1jvxz5vkxqgpv6gprwk32a0z3v12")))) + "0dsh6llfdz04w94xr3yl2b4vkk9g3rwhvfnxcd025v2424krxfls")))) (build-system r-build-system) (propagated-inputs `(("r-bit" ,r-bit))) (home-page "http://ff.r-forge.r-project.org/") @@ -3831,16 +3901,18 @@ most popular ones.") (define-public r-sp (package (name "r-sp") - (version "1.4-5") + (version "1.4-6") (source (origin (method url-fetch) (uri (cran-uri "sp" version)) (sha256 - (base32 "1nh9izsnszzm5kbq461w8bi0yh7fqzb74b2zmpg5qis0slbb5vkb")))) + (base32 "09m2ddbrbs2aqnq5si42ipa0g1vbd0pxg4zbcx59is2047pv7sws")))) (build-system r-build-system) (propagated-inputs `(("r-lattice" ,r-lattice))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://cran.r-project.org/web/packages/sp") (synopsis "Classes and methods for spatial data") (description @@ -3894,13 +3966,13 @@ matrices.") (define-public r-rmpi (package (name "r-rmpi") - (version "0.6-9.1") + (version "0.6-9.2") (source (origin (method url-fetch) (uri (cran-uri "Rmpi" version)) (sha256 (base32 - "1j8akqjan59yzwx2s1zxc214qyd323fd2i2dhgq0n11mb6ajmq4r")))) + "06mxqgrimhfsag5giv810c7ycdbaycqs4qcj41pnfbj0jypw32im")))) (properties `((upstream-name . "Rmpi"))) (build-system r-build-system) (arguments @@ -4011,14 +4083,14 @@ or excesses over a high threshold.") (define-public r-lmtest (package (name "r-lmtest") - (version "0.9-38") + (version "0.9-39") (source (origin (method url-fetch) (uri (cran-uri "lmtest" version)) (sha256 (base32 - "0sr19bmw2cpagfvwg772m79wvl1i2hww1xfr69bzr3rr8pm2r8ij")))) + "126l0y7j2iy6g1w4zii1qkfcjq6wrnc3w2li0bz376smpryddy3i")))) (build-system r-build-system) (propagated-inputs `(("r-zoo" ,r-zoo))) @@ -4831,14 +4903,14 @@ created using basic graphics.") (define-public r-generics (package (name "r-generics") - (version "0.1.0") + (version "0.1.1") (source (origin (method url-fetch) (uri (cran-uri "generics" version)) (sha256 (base32 - "0qw7r0d2qvlj1pvrlpv30d6akml624ydxkk19hv85iv6pfyx2wdb")))) + "04hrn6g5m5vi3znrcha3jw2q16lnmm3ygx2jl5aqiahg3azqwix2")))) (build-system r-build-system) (home-page "https://github.com/r-lib/generics") (synopsis "Common S3 generics not provided by base R methods") @@ -4851,20 +4923,21 @@ by base R methods related to model fitting.") (define-public r-broom (package (name "r-broom") - (version "0.7.9") + (version "0.7.10") (source (origin (method url-fetch) (uri (cran-uri "broom" version)) (sha256 (base32 - "1z65qyhkhkyalxhrvpsa7n8pickj9fjs8r4gzdvjp2rpggwramhx")))) + "0ks64xwkaqh5cinq8j56d89rn9kipm7cdipsgqmz9xxy7ajxb7qj")))) (build-system r-build-system) (propagated-inputs `(("r-backports" ,r-backports) ("r-dplyr" ,r-dplyr) ("r-ellipsis" ,r-ellipsis) ("r-generics" ,r-generics) + ("r-ggplot2" ,r-ggplot2) ("r-glue" ,r-glue) ("r-purrr" ,r-purrr) ("r-rlang" ,r-rlang) @@ -4984,14 +5057,14 @@ from the data points.") (define-public r-corrplot (package (name "r-corrplot") - (version "0.90") + (version "0.92") (source (origin (method url-fetch) (uri (cran-uri "corrplot" version)) (sha256 (base32 - "1pfmjqgakf7706l9257lqqnb6kin79gc94xfg7w47x2ijchiz1yr")))) + "1g98jk6xsl08z4n6sy5vriif99m31zhbz7j3dh1kfj4w7yb9zh78")))) (build-system r-build-system) (native-inputs `(("r-knitr" ,r-knitr))) @@ -5268,14 +5341,14 @@ programming} (SQP) based solver).") (define-public r-hardyweinberg (package (name "r-hardyweinberg") - (version "1.7.2") + (version "1.7.3") (source (origin (method url-fetch) (uri (cran-uri "HardyWeinberg" version)) (sha256 (base32 - "0g10jh71yp0pcag44z409xqb6d941l7y887a632962bk5rgn6q5p")))) + "0ppkzbhrb83dj796pm6gn5ypsf1ql8d9b3fv47w63i0snkhxfiv4")))) (properties `((upstream-name . "HardyWeinberg"))) (build-system r-build-system) (propagated-inputs @@ -5322,13 +5395,13 @@ and density estimation") (define-public r-venndiagram (package (name "r-venndiagram") - (version "1.6.20") + (version "1.7.0") (source (origin (method url-fetch) (uri (cran-uri "VennDiagram" version)) (sha256 (base32 - "1ic1jaxzw98si2p4n1fl4n3myhd7fpw0njb634cwhviwybzv6775")))) + "1l9mmc8wwn885l2b13kshhrkz53pqigcw6d8gklvv92fx5m5cdvm")))) (properties `((upstream-name . "VennDiagram"))) (build-system r-build-system) (propagated-inputs @@ -5666,14 +5739,14 @@ plots in @code{ggplot2}.") (define-public r-cli (package (name "r-cli") - (version "3.0.1") + (version "3.1.0") (source (origin (method url-fetch) (uri (cran-uri "cli" version)) (sha256 (base32 - "1zdld2cr83k4v7yrwa2csvcafwslwr610vk70mv1a3knrnv2b6nq")))) + "04ff3bgsahi736s8l6a26zlwwil8jw4shx7bb56ah1pp1f1n22n7")))) (build-system r-build-system) (propagated-inputs `(("r-glue" ,r-glue))) @@ -5873,13 +5946,13 @@ iVAT).") (define-public r-xfun (package (name "r-xfun") - (version "0.27") + (version "0.28") (source (origin (method url-fetch) (uri (cran-uri "xfun" version)) (sha256 - (base32 "11alh3kasiizfar0f667m5sj3s5443fggjv0541ghmxwlqrvyxf7")))) + (base32 "0civd050r94w2vwfx3xgz1w36wkwrkm5dscdv5kb3klbvqwy8nqb")))) (build-system r-build-system) ;; knitr itself depends on xfun #; @@ -6027,14 +6100,14 @@ packages that work with genomic data.") (define-public r-uuid (package (name "r-uuid") - (version "0.1-4") + (version "1.0-3") (source (origin (method url-fetch) (uri (cran-uri "uuid" version)) (sha256 (base32 - "0gm9ii7ncvllxbvyk6srsiinjmqyj7lmh84w43x4nhqpvafj9q4q")))) + "0il35jnci537r8zkinyiy5jp5q530p85ln6dswpj884zclrlcvj5")))) (build-system r-build-system) (home-page "https://www.rforge.net/uuid") (synopsis "Tools for generating and handling of UUIDs") @@ -6046,14 +6119,14 @@ packages that work with genomic data.") (define-public r-tinytex (package (name "r-tinytex") - (version "0.34") + (version "0.35") (source (origin (method url-fetch) (uri (cran-uri "tinytex" version)) (sha256 (base32 - "16z6v06pmvg02rbxkqyiidasg1dryy759zabnqjw6y85nybr618x")))) + "04ng34kfds2isz4j9ch1xlii0dfclqay9fsc6wvr6sfifzv9fqyk")))) (build-system r-build-system) (propagated-inputs `(("r-xfun" ,r-xfun))) @@ -6427,14 +6500,14 @@ financial trading strategies.") (define-public r-tseries (package (name "r-tseries") - (version "0.10-48") + (version "0.10-49") (source (origin (method url-fetch) (uri (cran-uri "tseries" version)) (sha256 (base32 - "0wa4rcf0igayi1yrwc6wak6d491560p0z89rz32haqlkiiq25gak")))) + "1fhldj95d16cwygw8xg0kvr4xk569mpzprdvahlsf4hzykc2dgs5")))) (build-system r-build-system) (propagated-inputs `(("r-quadprog" ,r-quadprog) @@ -6991,14 +7064,14 @@ systems.") (define-public r-radiant-data (package (name "r-radiant-data") - (version "1.3.12") + (version "1.4.1") (source (origin (method url-fetch) (uri (cran-uri "radiant.data" version)) (sha256 (base32 - "08bqqrfvpgyf613ikihwfnzb23l23f5nfs7zynnxbjxc1zfhbpny")) + "12x4nz5n6yz1a67ji79pwvznp9flmn50hpp9y9sfhixir7dvwy27")) (modules '((guix build utils))) (snippet '(begin @@ -7071,6 +7144,26 @@ a candidate list, using several criteria. The blocking can be done when whole and within plot factors interact.") (license license:gpl2+))) +(define-public r-alluvial + (package + (name "r-alluvial") + (version "0.1-2") + (source + (origin + (method url-fetch) + (uri (cran-uri "alluvial" version)) + (sha256 + (base32 "039frwrsxq1lb97s7vf2vbyyadimkigs628ymym06fxka53drdkp")))) + (properties `((upstream-name . "alluvial"))) + (build-system r-build-system) + (native-inputs `(("r-knitr" ,r-knitr))) + (home-page "https://github.com/mbojan/alluvial") + (synopsis "Create parallel sets plots (Alluvial Diagrams)") + (description + "This package creates alluvial diagrams (also known as parallel sets +plots) for multivariate and time series-like data.") + (license license:expat))) + (define-public r-signal (package (name "r-signal") @@ -7364,17 +7457,18 @@ evaluated by the @dfn{Akaike Information Criterion} (AIC).") (define-public r-arules (package (name "r-arules") - (version "1.6-8") + (version "1.7-1") (source (origin (method url-fetch) (uri (cran-uri "arules" version)) (sha256 (base32 - "1gy6wrys1qqik65dyr325hdbfmd3fx9a2lzdnrr29g751hprjx2l")))) + "0zzwr1mg92ha5l6razdb04da8ik3z3k74rm0rah44l1j2a6d30sk")))) (build-system r-build-system) (propagated-inputs - `(("r-matrix" ,r-matrix))) + `(("r-generics" ,r-generics) + ("r-matrix" ,r-matrix))) (home-page "https://github.com/mhahsler/arules") (synopsis "Mining association rules and frequent itemsets") (description @@ -7509,14 +7603,14 @@ dependency on Java.") (define-public r-rio (package (name "r-rio") - (version "0.5.27") + (version "0.5.29") (source (origin (method url-fetch) (uri (cran-uri "rio" version)) (sha256 (base32 - "02nxwg1d2m1h09a6ismhcp71gmq1c8rhbbl98if2v7xsvdn63sz0")))) + "04jlrhyl0791yxwcpp1s8p1hhkljnijlc5iaxpk56h41w63k39lz")))) (build-system r-build-system) (propagated-inputs `(("r-curl" ,r-curl) @@ -7920,14 +8014,14 @@ Python's @url{https://github.com/ActiveState/appdirs,Appdirs} to R.") (define-public r-rastervis (package (name "r-rastervis") - (version "0.51.0") + (version "0.51.1") (source (origin (method url-fetch) (uri (cran-uri "rasterVis" version)) (sha256 (base32 - "1gkn5na7cspnh3qpmi4k5n65crmp8c2s106g8hh51lsdvm5369aj")))) + "1mg11njzajx9az6xjghjl2sna6wzs85ga8fhy9w43l2n8icsfbr2")))) (properties `((upstream-name . "rasterVis"))) (build-system r-build-system) (propagated-inputs @@ -8457,14 +8551,14 @@ results to the user.") (define-public r-hdf5r (package (name "r-hdf5r") - (version "1.3.4") + (version "1.3.5") (source (origin (method url-fetch) (uri (cran-uri "hdf5r" version)) (sha256 (base32 - "0lxbdw1xf5yp82fkdj4wzp5mslay3qxd65459vh09dj131h5gl34")))) + "0bv2q4ir73sbk5ra2q4mc8wbcmiwkws8k0mjlnx9ysi2mdrm3dw7")))) (build-system r-build-system) (inputs `(("hdf5" ,hdf5) @@ -8623,14 +8717,14 @@ references and Rd files.") (define-public r-officer (package (name "r-officer") - (version "0.4.0") + (version "0.4.1") (source (origin (method url-fetch) (uri (cran-uri "officer" version)) (sha256 (base32 - "1za3vb1wmsianh9ygm6h5lyf796rni6w2adplz4z6z93r3mz4cmv")))) + "1gfx299zr4q2264q37994pirv5bd5isn1cszccz603ij3q40wajr")))) (build-system r-build-system) (propagated-inputs `(("r-r6" ,r-r6) @@ -8985,14 +9079,14 @@ functions.") (define-public r-flextable (package (name "r-flextable") - (version "0.6.9") + (version "0.6.10") (source (origin (method url-fetch) (uri (cran-uri "flextable" version)) (sha256 (base32 - "15lba98wnci2nsndj86gx3k94q9lfxhp5nr5xlhgcnycyj1c9zjx")))) + "01nm0357b0z4dgrplbq9ms63j51n0rgvvxyy068zdsc5p7j3lql2")))) (build-system r-build-system) (propagated-inputs `(("r-base64enc" ,r-base64enc) @@ -9428,13 +9522,13 @@ the analyzed items.") (define-public r-slam (package (name "r-slam") - (version "0.1-48") + (version "0.1-49") (source (origin (method url-fetch) (uri (cran-uri "slam" version)) (sha256 - (base32 "1ppsvkph4v1dffxgp12a4wnr9arj7pkmh4qv0and3f6nbz9k42qa")))) + (base32 "044hnfqbx57v5zr64gl09b5arj45swn9ywqzrl9rsc8267ys0028")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/slam/") (synopsis "Sparse lightweight arrays and matrices") @@ -10037,14 +10131,14 @@ subsequence} (LCS) using a dynamic programming algorithm.") (define-public r-labelled (package (name "r-labelled") - (version "2.8.0") + (version "2.9.0") (source (origin (method url-fetch) (uri (cran-uri "labelled" version)) (sha256 (base32 - "0fs8fhmk9j2nv2j87mpkmm0clz34f8kybnzn6pzqpcbwk0i2pcwg")))) + "0ffnhlr239nqcwb35m4hll21abnnhpmyy5wlxnyahrg0kqb0xb1n")))) (properties `((upstream-name . "labelled"))) (build-system r-build-system) (propagated-inputs @@ -10145,13 +10239,13 @@ Processing of very large files is supported.") (define-public r-mosaic (package (name "r-mosaic") - (version "1.4.0") + (version "1.8.3") (source (origin (method url-fetch) (uri (cran-uri "mosaic" version)) (sha256 - (base32 "10jbrg8kli00kfgbh2f67bymm5cnlancc9dplb1j7fl552yjddn2")))) + (base32 "1y0isqbva0vi5zlx1xvixbq87n4xp66ljh43qnd0cpzaz0mn21cg")))) (build-system r-build-system) (propagated-inputs `(("r-broom" ,r-broom) @@ -11400,14 +11494,14 @@ differentiation.") (define-public r-bayestestr (package (name "r-bayestestr") - (version "0.11.0") + (version "0.11.5") (source (origin (method url-fetch) (uri (cran-uri "bayestestR" version)) (sha256 (base32 - "0bwfw1lh4yp8y77sfmxzqqqy5aw59q1lqhfcssa46ph6d4hyxwic")))) + "0lz8mzacxgmll576p88654mrvlk4pzvhwwghvn5pm7zxisgx0kq0")))) (properties `((upstream-name . "bayestestR"))) (build-system r-build-system) (propagated-inputs @@ -11717,14 +11811,14 @@ user credentials.") (define-public r-gert (package (name "r-gert") - (version "1.4.1") + (version "1.4.3") (source (origin (method url-fetch) (uri (cran-uri "gert" version)) (sha256 (base32 - "1y3318whcifdng87wyngfjq18601zrlj4d8sx40v2c2m5kqmhfv2")))) + "06g3gy4260y4f43zgahamckisjs8dvl06rb0kyinrwlm675dqppm")))) (properties `((upstream-name . "gert"))) (build-system r-build-system) (inputs @@ -11753,14 +11847,14 @@ User credentials are shared with command line git through the (define-public r-usethis (package (name "r-usethis") - (version "2.1.0") + (version "2.1.3") (source (origin (method url-fetch) (uri (cran-uri "usethis" version)) (sha256 (base32 - "1s40rbr2z9bilsldp8pv5abrr7n0ixyxi2qqbf4hfhs14rhigncy")))) + "1gwvirp53pa0zychd7d47d56a2vfdzz7l3p61l8m9n270ac7bc1d")))) (build-system r-build-system) (propagated-inputs `(("r-cli" ,r-cli) @@ -11768,7 +11862,6 @@ User credentials are shared with command line git through the ("r-crayon" ,r-crayon) ("r-curl" ,r-curl) ("r-desc" ,r-desc) - ("r-ellipsis" ,r-ellipsis) ("r-fs" ,r-fs) ("r-gert" ,r-gert) ("r-gh" ,r-gh) @@ -11795,18 +11888,17 @@ Rcpp, RStudio projects, and more.") (define-public r-sessioninfo (package (name "r-sessioninfo") - (version "1.1.1") + (version "1.2.1") (source (origin (method url-fetch) (uri (cran-uri "sessioninfo" version)) (sha256 (base32 - "0j5f3l58fynxx3v0w62vqpii7miabszgljpja36xx9s8hikh8sqn")))) + "0w3vhp652524348a4cfyvvs8z9xpxkcznw8x406nvkwfh0gdyka2")))) (build-system r-build-system) (propagated-inputs - `(("r-cli" ,r-cli) - ("r-withr" ,r-withr))) + `(("r-cli" ,r-cli))) (home-page "https://github.com/r-lib/sessioninfo#readme") (synopsis "R session information") (description @@ -12246,14 +12338,14 @@ inside R when they might usually leave to execute non-R software.") (define-public r-rslurm (package (name "r-rslurm") - (version "0.6.0") + (version "0.6.1") (source (origin (method url-fetch) (uri (cran-uri "rslurm" version)) (sha256 (base32 - "0fn2na8prsaxa03x5wi3105gpsxc35qvgmik7wy3nylvx4wdfv9g")))) + "19451icfh7snjbbmpzpr1hrdf52q8ijv0ag1di3y55r2la3jxxcf")))) (properties `((upstream-name . "rslurm"))) (build-system r-build-system) (propagated-inputs `(("r-whisker" ,r-whisker))) @@ -12392,14 +12484,14 @@ other values.") (define-public r-ncdf4 (package (name "r-ncdf4") - (version "1.17") + (version "1.17.1") (source (origin (method url-fetch) (uri (cran-uri "ncdf4" version)) (sha256 (base32 - "1xls44ln2zjrrlimxl8v4bk2ni3g45c9j0gxdnjx31rikmrc95fv")))) + "1fyjhp2zkvp7ls1sxn623far7473lpkfsqqvj3a1fczpmqs6iw4m")))) (build-system r-build-system) (inputs `(("netcdf" ,netcdf) @@ -12440,14 +12532,14 @@ Bioconductor packages.") (define-public r-rgl (package (name "r-rgl") - (version "0.107.14") + (version "0.108.3") (source (origin (method url-fetch) (uri (cran-uri "rgl" version)) (sha256 (base32 - "1z5h4wbjj18prcykc96rqcn699pnqw6vybwj2mpbbbdw2lr3q8b7")))) + "0fqkx079z9y5b1gdg6qfz2wpw2j8q3ddflfkd9wwrkyacas6xyc9")))) (build-system r-build-system) (native-inputs `(("pkg-config" ,pkg-config) @@ -12460,12 +12552,12 @@ Bioconductor packages.") ("pandoc" ,pandoc) ("zlib" ,zlib))) (propagated-inputs - `(("r-crosstalk" ,r-crosstalk) - ("r-htmltools" ,r-htmltools) + `(("r-htmltools" ,r-htmltools) ("r-htmlwidgets" ,r-htmlwidgets) ("r-jsonlite" ,r-jsonlite) ("r-knitr" ,r-knitr) - ("r-magrittr" ,r-magrittr))) + ("r-magrittr" ,r-magrittr) + ("r-r6" ,r-r6))) (home-page "https://r-forge.r-project.org/projects/rgl/") (synopsis "3D visualization using OpenGL") (description @@ -12720,14 +12812,14 @@ parametrizations of Nolan.") (define-public r-gsl (package (name "r-gsl") - (version "2.1-7") + (version "2.1-7.1") (source (origin (method url-fetch) (uri (cran-uri "gsl" version)) (sha256 (base32 - "05rvky8sh3jrlz0xbd6nss8h8ykfg1v10dymhlmcykl6v5csz1hs")))) + "118rj9kjx9rzlynvhrly19qz3yxg8jzws35971ssgzrp5lwd367f")))) (build-system r-build-system) (inputs `(("gsl" ,gsl))) @@ -12845,14 +12937,14 @@ redundant complex conjugate when the input is real data.") (define-public r-tiff (package (name "r-tiff") - (version "0.1-8") + (version "0.1-10") (source (origin (method url-fetch) (uri (cran-uri "tiff" version)) (sha256 (base32 - "18m17g5q3nz4v4wrqxnb129b1j02873g2vknddczkklf1pvq4x2b")))) + "1zha6bzb1rmfl6n2xjkygs9wfi3ah9cjr7a6jzk4zqc5kvl58lak")))) (build-system r-build-system) (inputs `(("libtiff" ,libtiff) @@ -12988,13 +13080,13 @@ maps.") (define-public r-tidytree (package (name "r-tidytree") - (version "0.3.5") + (version "0.3.6") (source (origin (method url-fetch) (uri (cran-uri "tidytree" version)) (sha256 - (base32 "0zk46n3nh577k2jy34isdw845hk0blkvqk7rg5nmix5b65qsp762")))) + (base32 "1gnpm4zz0kvqng5s179301q0h5993ajynm8y0zbdz38qcmzfpsdk")))) (build-system r-build-system) (propagated-inputs `(("r-ape" ,r-ape) @@ -13004,7 +13096,8 @@ maps.") ("r-rlang" ,r-rlang) ("r-tibble" ,r-tibble) ("r-tidyr" ,r-tidyr) - ("r-tidyselect" ,r-tidyselect))) + ("r-tidyselect" ,r-tidyselect) + ("r-yulab-utils" ,r-yulab-utils))) (native-inputs `(("r-knitr" ,r-knitr))) (home-page "https://github.com/GuangchuangYu/tidytree") @@ -13506,13 +13599,13 @@ creating color scales and calculating color distances.") (define-public r-ore (package (name "r-ore") - (version "1.7.0") + (version "1.7.1.1") (source (origin (method url-fetch) (uri (cran-uri "ore" version)) (sha256 - (base32 "0qhbv7bynisr0prv7h0yxsxff7qdxfqza7i06xi4vn360kxx6w9g")))) + (base32 "0rs5r5h11x4l4nsbl4xqzbl4ahajd5374fq05abcmfjnjr9j64w5")))) (build-system r-build-system) (home-page "https://github.com/jonclayden/ore") (synopsis "R interface to the Onigmo regular expression library") @@ -13577,14 +13670,14 @@ handling.") (define-public r-grimport (package (name "r-grimport") - (version "0.9-4") + (version "0.9-5") (source (origin (method url-fetch) (uri (cran-uri "grImport" version)) (sha256 (base32 - "0y9lsvfp1350das5v5d5pkv10z0n1crc7k4zn9inr94f9s4kjjr5")))) + "0pbzc45wgp0cpycnw0bzn65ckdszzay0zrp7c7ssxdkifp8bai3a")))) (properties `((upstream-name . "grImport"))) (build-system r-build-system) (inputs @@ -13912,14 +14005,14 @@ preparing, executing, and processing HTTP requests.") (define-public r-gmp (package (name "r-gmp") - (version "0.6-2") + (version "0.6-2.1") (source (origin (method url-fetch) (uri (cran-uri "gmp" version)) (sha256 (base32 - "03kzbflgpy5sgnzxmhshs5qv7jjmfc113ybkhxys4z8y7xdv9z3b")))) + "1mj7hy6riaxl9n4q2cnyyjazwad90xbjszk25si968618rih4n64")))) (build-system r-build-system) (arguments '(#:phases @@ -13939,14 +14032,14 @@ limitations\" using the GNU Multiple Precision library.") (define-public r-rmpfr (package (name "r-rmpfr") - (version "0.8-5") + (version "0.8-7") (source (origin (method url-fetch) (uri (cran-uri "Rmpfr" version)) (sha256 (base32 - "1a37zaahcyccb5kgad98z4dh9n75vffmiziv4al8axvihxqs5hjn")))) + "1ljpbxvm4agbxnab5dfffbpw5k964hy3gw57dzydq1gpbxwdphlk")))) (properties `((upstream-name . "Rmpfr"))) (build-system r-build-system) (inputs @@ -14439,13 +14532,13 @@ Differences with other sparse matrix packages are: (define-public r-fields (package (name "r-fields") - (version "12.5") + (version "13.3") (source (origin (method url-fetch) (uri (cran-uri "fields" version)) (sha256 - (base32 "08jfqlz42vq23h2yq279cs2rva9fadi4q6cmk4dvixrmyprx5xyk")))) + (base32 "1hs4k5a9hh0r5fsrnpnvs6wvf78xpjzj8a2j6643dsz73a5q6ln6")))) (build-system r-build-system) (propagated-inputs `(("r-maps" ,r-maps) @@ -14601,14 +14694,14 @@ discovery rates.") (define-public r-longitudinal (package (name "r-longitudinal") - (version "1.1.12") + (version "1.1.13") (source (origin (method url-fetch) (uri (cran-uri "longitudinal" version)) (sha256 (base32 - "1d83ws28nxi3kw5lgd5n5y7865djq7ky72fw3ddi1fkkhg1r9y6l")))) + "046w3xbr535c5jyd68adv42a7limxp1mv57b5w6w673w707lmw2p")))) (build-system r-build-system) (propagated-inputs `(("r-corpcor" ,r-corpcor))) (home-page "http://strimmerlab.org/software/longitudinal/") @@ -14623,14 +14716,14 @@ dynamical correlation and dynamical covariance.") (define-public r-genenet (package (name "r-genenet") - (version "1.2.15") + (version "1.2.16") (source (origin (method url-fetch) (uri (cran-uri "GeneNet" version)) (sha256 (base32 - "11ba6ahsk3x9alvcw8bai2bpg84ki1m8nadrjjdhjg65svhw8njm")))) + "1r1khga3nxxjghs4vnbymzp0cwb1q17zw2v3a94qz8fsrirq1sf1")))) (properties `((upstream-name . "GeneNet"))) (build-system r-build-system) (propagated-inputs @@ -14937,14 +15030,14 @@ them in distributed compute environments.") (define-public r-parallelly (package (name "r-parallelly") - (version "1.28.1") + (version "1.29.0") (source (origin (method url-fetch) (uri (cran-uri "parallelly" version)) (sha256 (base32 - "0qy6gj1xybiziks5gvw5px81n3klgr16kvb1qn1xp6j030xqibpl")))) + "0a84lr2jqqnvmdayb9v9kv7m8rffp65s4s1wcalr96sl3cxypyc7")))) (properties `((upstream-name . "parallelly"))) (build-system r-build-system) (home-page "https://github.com/HenrikBengtsson/parallelly") @@ -14965,14 +15058,14 @@ port-forwarding to your local computer.") (define-public r-future (package (name "r-future") - (version "1.22.1") + (version "1.23.0") (source (origin (method url-fetch) (uri (cran-uri "future" version)) (sha256 (base32 - "1kgdpfipnwi15wz2xvlfg3bmq424hhjzja5bks01v3phra2lmcl7")))) + "1y5qzpsg0r2dccynyybbb2ngxbl1y3phs1dq2jj3f2bwhc7chsfq")))) (build-system r-build-system) (arguments `(#:phases @@ -15438,13 +15531,13 @@ such software by imputing dropout events.") (define-public r-gamlss-dist (package (name "r-gamlss-dist") - (version "5.3-2") + (version "6.0-1") (source (origin (method url-fetch) (uri (cran-uri "gamlss.dist" version)) (sha256 - (base32 "1lyf2rvkplywgyhcni93k52z3b89vv86yrgl38dx3ln3436r5ahc")))) + (base32 "0m41n7zf7m0mh1w9ql70wqnzsf2f013ql699im7zmp6fdggb8qxm")))) (properties `((upstream-name . "gamlss.dist"))) (build-system r-build-system) (propagated-inputs `(("r-mass" ,r-mass))) @@ -15836,14 +15929,14 @@ graphs.") (define-public r-pbdzmq (package (name "r-pbdzmq") - (version "0.3-5") + (version "0.3-6") (source (origin (method url-fetch) (uri (cran-uri "pbdZMQ" version)) (sha256 (base32 - "1v8iv1pzs4j3ics9k9h4xjkv6z1ma2xbqy003xk2lqax6srqi02d")))) + "0yy3x3l04vx13jbjbvkvsc8jdbf0abndjfknszdx3bi18b2chi4r")))) (properties `((upstream-name . "pbdZMQ"))) (build-system r-build-system) (inputs @@ -16415,14 +16508,14 @@ classes.") (define-public r-udunits2 (package (name "r-udunits2") - (version "0.13") + (version "0.13.1") (source (origin (method url-fetch) (uri (cran-uri "udunits2" version)) (sha256 (base32 - "0yav7rm2afcx67xqrknybxgz7x63w78zyxa0xifvc0k2gz0d6mfi")))) + "1l889f8iy8qaacxfs6ll62d6hs8g8qsr5ynn24grpvp8dk8l888w")))) (properties `((upstream-name . "udunits2"))) (build-system r-build-system) (inputs @@ -16597,14 +16690,14 @@ information about geometries.") (define-public r-sf (package (name "r-sf") - (version "1.0-3") + (version "1.0-4") (source (origin (method url-fetch) (uri (cran-uri "sf" version)) (sha256 (base32 - "1y1im0wxqx0vqas6ggmi6p1dyp98l895jy3asxky4vq5wpjfrqrf")))) + "0dxln3ikqmwczz0ri63xwj05v09hkpljw2qvma6n03nzczyg2713")))) (build-system r-build-system) (inputs `(("gdal" ,gdal) @@ -16635,13 +16728,13 @@ datum transformations.") (define-public r-spdep (package (name "r-spdep") - (version "1.1-11") + (version "1.1-12") (source (origin (method url-fetch) (uri (cran-uri "spdep" version)) (sha256 (base32 - "1ym523dzpiji6c8ypa3gvw8va36gl1gnzcsvdg9drly3mlq42rpr")) + "1dykhsk5djh62b3zcvpmvm3s87rn8ywzbwblhzivhln0y6pzk9hv")) (snippet '(for-each delete-file '("inst/doc/nb_igraph.html" "inst/doc/nb_igraph.R" @@ -17180,14 +17273,14 @@ and a QP solver.") (define-public r-hierfstat (package (name "r-hierfstat") - (version "0.5-7") + (version "0.5-10") (source (origin (method url-fetch) (uri (cran-uri "hierfstat" version)) (sha256 (base32 - "0dp8k1z5a8gqnax99y1hwfvxilzf4n2i751zr0z6ihrzirsvb3m3")))) + "1p4vlna185sa3b5xjbysiqxcj9aa5s7dmxy41hg79vlqdivf874r")))) (build-system r-build-system) (propagated-inputs `(("r-ade4" ,r-ade4) @@ -18530,14 +18623,14 @@ colored by the number of neighboring points. This is useful to visualize the (define-public r-arrow (package (name "r-arrow") - (version "5.0.0.2") + (version "6.0.1") (source (origin (method url-fetch) (uri (cran-uri "arrow" version)) (sha256 (base32 - "1ajkcmasj22j5k15ms7iyd1rg9qpdj5jya6nmhzh8z4iiv7gy13j")))) + "14fghz9xijcrck0c65crvfidgyhgzy9b2apwmg7qrgn2sy09xm0p")))) (properties `((upstream-name . "arrow"))) (build-system r-build-system) (inputs @@ -19147,14 +19240,14 @@ classification and regression models.") (define-public r-dae (package (name "r-dae") - (version "3.2-11") + (version "3.2-13") (source (origin (method url-fetch) (uri (cran-uri "dae" version)) (sha256 (base32 - "0jrdfaw6aqv7k323yscsfpdkb3c4vi5ibncl6m96b9820pvycsz8")))) + "0mq94ah21p1glvsbvdmi2p7nlgz1bvq7w3rz2z3mdqq18kz6nkjw")))) (build-system r-build-system) (propagated-inputs `(("r-ggplot2" ,r-ggplot2) @@ -19264,14 +19357,14 @@ includes data sets from oceanography.") (define-public r-ggfortify (package (name "r-ggfortify") - (version "0.4.12") + (version "0.4.13") (source (origin (method url-fetch) (uri (cran-uri "ggfortify" version)) (sha256 (base32 - "13f3ggn94czw7xw5qxwrdncr2h7z7bvwgw8zxni8wkc8x3kbz5rd")))) + "0qls8pyndrlwx75wzlc0xmk04qq263d7065r3d6kvay7haa4nm40")))) (build-system r-build-system) (propagated-inputs `(("r-dplyr" ,r-dplyr) @@ -19361,19 +19454,18 @@ the current document.") (define-public r-xgboost (package (name "r-xgboost") - (version "1.4.1.1") + (version "1.5.0.2") (source (origin (method url-fetch) (uri (cran-uri "xgboost" version)) (sha256 (base32 - "1i706h6yhayzbqlqa1z6fgjc56kxm3isz0jw6d26fpyfjlw6z64z")))) + "04xbgrrb3aq067hrivslq5f2rd1v95yfv7lkj596ijyqi6ibjl27")))) (build-system r-build-system) (propagated-inputs `(("r-data-table" ,r-data-table) ("r-jsonlite" ,r-jsonlite) - ("r-magrittr" ,r-magrittr) ("r-matrix" ,r-matrix))) (native-inputs `(("r-knitr" ,r-knitr))) @@ -19512,14 +19604,14 @@ path of values for the regularization parameter.") (define-public r-rhpcblasctl (package (name "r-rhpcblasctl") - (version "0.21-247") + (version "0.21-247.1") (source (origin (method url-fetch) (uri (cran-uri "RhpcBLASctl" version)) (sha256 (base32 - "09276fpkj6xa0zpzzdckclj923b0xr0rhfjiiwfli3kyqi2m37v2")))) + "0scpr6jq25xx7wmqyc380ann4h536ll0g7wblikk25yqvpamzrav")))) (properties `((upstream-name . "RhpcBLASctl"))) (build-system r-build-system) (home-page "https://prs.ism.ac.jp/~nakama/Rhpc/") @@ -19816,14 +19908,14 @@ be used further by e.g. graphic devices.") (define-public r-graphlayouts (package (name "r-graphlayouts") - (version "0.7.1") + (version "0.7.2") (source (origin (method url-fetch) (uri (cran-uri "graphlayouts" version)) (sha256 (base32 - "05v7ss18bflhqa4ipsca8iw2ln8ddbaiyrizx2a5cwq81g5qq3rq")))) + "0vncg1pfnwrfkjfwz5k86b0ir8vnjkbyd0kzpbgb0cpkdz7987pc")))) (properties `((upstream-name . "graphlayouts"))) (build-system r-build-system) (propagated-inputs @@ -19843,14 +19935,14 @@ emphasize hidden group structures in networks or focus on specific nodes.") (define-public r-terra (package (name "r-terra") - (version "1.4-11") + (version "1.4-20") (source (origin (method url-fetch) (uri (cran-uri "terra" version)) (sha256 (base32 - "08gx28ad00adz4fqch3fx27s6yd0rpjhmdy6b83d1wnlzzgc13qa")))) + "0c4nx113sfympixy5rkvgzc7pprcfflnadkbwhcpzjlky8gmmsk4")))) (properties `((upstream-name . "terra"))) (build-system r-build-system) (inputs @@ -21118,14 +21210,14 @@ facilitates insertion into pipelines, and content inspection.") (define-public r-rngwell (package (name "r-rngwell") - (version "0.10-6") + (version "0.10-7") (source (origin (method url-fetch) (uri (cran-uri "rngWELL" version)) (sha256 (base32 - "0pjjcs9pqj7mf0mhb2cwd0aanqpwnm65bm86hk6mi2vw8rgnj2vv")))) + "0f1dxxaimfb0fww8ym9ciqf6q760ai46wxldl37m5mfpd57ca00c")))) (properties `((upstream-name . "rngWELL"))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/rngWELL/") @@ -21164,14 +21256,14 @@ and prints vectorized images.") (define-public r-randtoolbox (package (name "r-randtoolbox") - (version "1.30.1") + (version "1.31.1") (source (origin (method url-fetch) (uri (cran-uri "randtoolbox" version)) (sha256 (base32 - "0qg20ar6qns858jdzqhmfq7yji81czhr6cim257958gqpj66sn95")))) + "1b9vjzqg014hxp1vfb62m01d7xim5vmpbyxzlbll49bqas0jx69h")))) (properties `((upstream-name . "randtoolbox"))) (build-system r-build-system) (propagated-inputs @@ -21310,14 +21402,14 @@ discussed in Reisen et al. (2017) @url{doi:10.1016/j.jspi.2017.02.008}.") (define-public r-gamlss-data (package (name "r-gamlss-data") - (version "6.0-1") + (version "6.0-2") (source (origin (method url-fetch) (uri (cran-uri "gamlss.data" version)) (sha256 (base32 - "1cjb2n5i5mnhmb5qbqycdbfg65j7nxb9s74yihqs9kpa39byrzcq")))) + "07mpdl4h9rwmnpl9jmsn6ig8ji11an6pyjfsvg62h2alapwbdcyv")))) (properties `((upstream-name . "gamlss.data"))) (build-system r-build-system) (home-page "http://www.gamlss.org/") @@ -22322,14 +22414,14 @@ variable observed over time.") (define-public r-fda (package (name "r-fda") - (version "5.4.0") + (version "5.5.1") (source (origin (method url-fetch) (uri (cran-uri "fda" version)) (sha256 (base32 - "000flssclb2c1sfm2czyp1qxrfrl9rp6bd8sw87ign8165maplqf")))) + "0fm2vswc8fdi2p1axby0hjwh8m6lc1zrdikrpiamilr6w9m2zanw")))) (properties `((upstream-name . "fda"))) (build-system r-build-system) (propagated-inputs @@ -22641,14 +22733,14 @@ number embedded in the file rather than the file extension.") (define-public r-imager (package (name "r-imager") - (version "0.42.10") + (version "0.42.11") (source (origin (method url-fetch) (uri (cran-uri "imager" version)) (sha256 (base32 - "1vmfmmawbk8sgyba87igaxpwb926nb1ji8a08ad3dqfj7aq9x4q1")))) + "1a1jhmgrpv1d0fk14axj88qvxgb25bqnj65d60g1k985ipzvgy27")))) (properties `((upstream-name . "imager"))) (build-system r-build-system) (inputs @@ -23721,14 +23813,14 @@ programming} (OOP) using R Reference Class.") (define-public r-proxyc (package (name "r-proxyc") - (version "0.2.1") + (version "0.2.3") (source (origin (method url-fetch) (uri (cran-uri "proxyC" version)) (sha256 (base32 - "1j8zsxdnpi8bywd7hhm47icgl1jhfyd8myj78bqgk7warai6m3iq")))) + "1g90d82rp82dkidlfykankprzpp94d7394s2b2qjlyiia3k0hlb3")))) (properties `((upstream-name . "proxyC"))) (build-system r-build-system) (propagated-inputs @@ -23771,14 +23863,14 @@ character codes as well as the UN M.49 area codes.") (define-public r-stopwords (package (name "r-stopwords") - (version "2.2") + (version "2.3") (source (origin (method url-fetch) (uri (cran-uri "stopwords" version)) (sha256 (base32 - "1f862y30c4r0phamlp7shzkpxg0vh3i410xy0336w310hv3wqsxn")))) + "1ci1cgxrcvlhhplximsfv0plvjdbcd5kv0nphxnpildsn5m1rv65")))) (properties `((upstream-name . "stopwords"))) (build-system r-build-system) (propagated-inputs @@ -24645,14 +24737,14 @@ and reproducible way.") (define-public r-rsconnect (package (name "r-rsconnect") - (version "0.8.24") + (version "0.8.25") (source (origin (method url-fetch) (uri (cran-uri "rsconnect" version)) (sha256 (base32 - "19p4w9dmhsl1vdvwv3hfmd5qzf4296g0x878idfajvrx0wgfysyg")))) + "1kyr4v7vds2yw3xmkk2yr56ylz1h95944brylwvwmwj5yxvm419w")))) (properties `((upstream-name . "rsconnect"))) (build-system r-build-system) (propagated-inputs @@ -25348,14 +25440,14 @@ service. Functions are provided to work with the OAI-PMH verbs: (define-public r-argon2 (package (name "r-argon2") - (version "0.2-0") + (version "0.4-0") (source (origin (method url-fetch) (uri (cran-uri "argon2" version)) (sha256 (base32 - "0kqn06rpb39jlzizjlnc5c44mfic8llrshxn7ljgmyj35lbqwxqh")))) + "09hzl0wz0lw2v7g64rdv0lij2hq36zl37a6rmxwvinmjdzijcsyw")))) (properties `((upstream-name . "argon2"))) (build-system r-build-system) (home-page "https://github.com/wrathematics/argon2") @@ -25686,14 +25778,14 @@ Mean Test, Durbin-Watson statistic etc.") (define-public r-rcdd (package (name "r-rcdd") - (version "1.4") + (version "1.5") (source (origin (method url-fetch) (uri (cran-uri "rcdd" version)) (sha256 (base32 - "02jj1lpk4kvjh5484lbdrdlx2ffk9qdxys7afyakd5kl6swqalz2")))) + "0zxx0qvv26ba30jkm8mvca4h59rqklay4jwazpcw7h9dzp4189jr")))) (properties `((upstream-name . "rcdd"))) (build-system r-build-system) @@ -26018,24 +26110,23 @@ with posterior predictive checks and leave-one-out cross-validation.") (define-public r-mstate (package (name "r-mstate") - (version "0.3.1") + (version "0.3.2") (source (origin (method url-fetch) (uri (cran-uri "mstate" version)) (sha256 (base32 - "11i3p7fph8nbnfis1m7rdrq32qryaajv2wrkxk1x6k17zkh4rq6i")))) + "054dzrd5b0xjjjl7862q3aq1jwgrxbkqz7zpvbdirqsld3zksirw")))) (properties `((upstream-name . "mstate"))) (build-system r-build-system) (propagated-inputs `(("r-data-table" ,r-data-table) ("r-lattice" ,r-lattice) - ("r-magrittr" ,r-magrittr) ("r-rcolorbrewer" ,r-rcolorbrewer) ("r-rlang" ,r-rlang) ("r-survival" ,r-survival) - ("r-viridis" ,r-viridis))) + ("r-viridislite" ,r-viridislite))) (native-inputs `(("r-knitr" ,r-knitr))) (home-page @@ -26255,14 +26346,14 @@ input.") (define-public r-lightgbm (package (name "r-lightgbm") - (version "3.3.0") + (version "3.3.1") (source (origin (method url-fetch) (uri (cran-uri "lightgbm" version)) (sha256 (base32 - "1sgimzax84rag02gqv2qag2cg8mmhkv71xydawg7bkxk95dycbc2")))) + "0hvpwirskzcd7ww47f9gllgl3wjvpghnwj8a41glpppwwaaxa0z4")))) (properties `((upstream-name . "lightgbm"))) (build-system r-build-system) (propagated-inputs @@ -26477,18 +26568,19 @@ you can automate browsers locally or remotely.") (define-public r-conquer (package (name "r-conquer") - (version "1.0.2") + (version "1.2.1") (source (origin (method url-fetch) (uri (cran-uri "conquer" version)) (sha256 (base32 - "1zvlsrbmrij011mcdi3qngs1al2lhrdiyknxnk0w1zhzrra62bsl")))) + "0i9g27f52zl2kb2392g0y614drf6s87dqz12aphj889ajq7zjm0k")))) (properties `((upstream-name . "conquer"))) (build-system r-build-system) (propagated-inputs - `(("r-matrix" ,r-matrix) + `(("r-caret" ,r-caret) + ("r-matrix" ,r-matrix) ("r-matrixstats" ,r-matrixstats) ("r-rcpp" ,r-rcpp) ("r-rcpparmadillo" ,r-rcpparmadillo))) @@ -26764,14 +26856,14 @@ for the geometry of linear networks.") (define-public r-spatstat-core (package (name "r-spatstat-core") - (version "2.3-0") + (version "2.3-1") (source (origin (method url-fetch) (uri (cran-uri "spatstat.core" version)) (sha256 (base32 - "1j962lzllqzxkd57j6immyj94pc53ff9mlvw1iscw7cnn9nyr5ap")))) + "1fq6ynds66d836drf758syqhfz0341fxif0r5hbf5lfkwp3a2wfk")))) (properties `((upstream-name . "spatstat.core"))) (build-system r-build-system) (propagated-inputs @@ -26885,14 +26977,14 @@ for linear mixed models (AIREML).") (define-public r-cpp11 (package (name "r-cpp11") - (version "0.4.0") + (version "0.4.1") (source (origin (method url-fetch) (uri (cran-uri "cpp11" version)) (sha256 (base32 - "11qyliiw2qrac56mq5h9v7gy3dvwjj1i26pvygwbpprhvh3zss0p")))) + "1nk47xkab7i17h7917l4cfyfvnxf782dfq67wwxa6n0r4jqqxzz9")))) (properties `((upstream-name . "cpp11"))) (build-system r-build-system) (native-inputs `(("r-knitr" ,r-knitr))) @@ -27514,14 +27606,14 @@ model.") (define-public r-igraph (package (name "r-igraph") - (version "1.2.7") + (version "1.2.8") (source (origin (method url-fetch) (uri (cran-uri "igraph" version)) (sha256 (base32 - "1r8vmqm2rq1jnkh8axr4gw1hbj34ca1dil154qp037imfcra1h95")))) + "01hvphaf5mx9xvwiazcw39kp6gc1lafqrbjwczy6f7hr145dn1pl")))) (build-system r-build-system) (native-inputs `(("gfortran" ,gfortran))) @@ -27726,14 +27818,14 @@ sliding windows are to be created.") (define-public r-rsample (package (name "r-rsample") - (version "0.1.0") + (version "0.1.1") (source (origin (method url-fetch) (uri (cran-uri "rsample" version)) (sha256 (base32 - "00w8r0p499fm8cyw297gznr83mbgy9a3znzpbgj0zq9dry1a266b")))) + "01xwhj4zfvxbv9cjb6mbz3aphxqc3cnjjx1xy2yx2wd94fbka42z")))) (properties `((upstream-name . "rsample"))) (build-system r-build-system) (propagated-inputs @@ -28462,14 +28554,14 @@ designs. Broman et al. (2018) <doi:10.1534/genetics.118.301595>.") (define-public r-seqminer (package (name "r-seqminer") - (version "8.0") + (version "8.2") (source (origin (method url-fetch) (uri (cran-uri "seqminer" version)) (sha256 (base32 - "00jzj8mwb0zaiwlifd41b26mrq9mzigj18nc29dydi0r42hxg16i")))) + "097313x72jr2q6dp8ma33w8kyp3gfw71snf1qx2maxbwwnysk085")))) (build-system r-build-system) (inputs `(("zlib" ,zlib))) @@ -28535,14 +28627,14 @@ data to rasters. It speeds up plotting of data with millions of points.") (define-public r-seuratobject (package (name "r-seuratobject") - (version "4.0.2") + (version "4.0.3") (source (origin (method url-fetch) (uri (cran-uri "SeuratObject" version)) (sha256 (base32 - "076bd6xmpnspnz7raw03mfgknnygx79sj3c9q6yhpanc46i9gvk4")))) + "06gch6416hmwpfxa7bidw5izfp4yvkdka7mvxp6grmldnj5iqm6g")))) (properties `((upstream-name . "SeuratObject"))) (build-system r-build-system) (propagated-inputs @@ -28670,23 +28762,60 @@ rapid and on-disk conversion between h5Seurat and AnnData objects, with the goal of enhancing interoperability between Seurat and Scanpy.") (license license:gpl3)))) +(define-public r-seuratdata + (let ((commit "b59556b24d7d6728a5744c9c715dd5f7f32ed7a5") + (revision "1")) + (package + (name "r-seuratdata") + (version (git-version "0.2.1" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/satijalab/seurat-data") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1xfdmdmgn4r0z6w4cxa98ic6xk8i6qz054r215dvqbjs1vydsbf9")))) + (properties `((upstream-name . "SeuratData"))) + (build-system r-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; When there is no HOME directory, this package will fail to load + ;; the included list of packages. + (add-after 'unpack 'set-HOME + (lambda _ (setenv "HOME" "/tmp")))))) + (propagated-inputs + `(("r-cli" ,r-cli) + ("r-crayon" ,r-crayon) + ("r-rappdirs" ,r-rappdirs))) + (home-page "https://github.com/satijalab/seurat-data") + (synopsis "Install and manage Seurat datasets") + (description + "Single cell RNA sequencing datasets can be large, consisting of +matrices that contain expression data for several thousand features across +several thousand cells. This package is designed to easily install, manage, +and learn about various single-cell datasets, provided Seurat objects and +distributed as independent packages.") + (license license:gpl3)))) + (define-public r-phangorn (package (name "r-phangorn") - (version "2.7.1") + (version "2.8.0") (source (origin (method url-fetch) (uri (cran-uri "phangorn" version)) (sha256 (base32 - "160kks4bg4iwy8g234g6aiiqbvz7ki5k9csyax3kjv7ia5wddafq")))) + "1pg5lfc5m4ccphswbfbihj91ppmqhf4084kbjlmfsrqxylsyy8ch")))) (build-system r-build-system) (propagated-inputs `(("r-ape" ,r-ape) ("r-fastmatch" ,r-fastmatch) ("r-igraph" ,r-igraph) - ("r-magrittr" ,r-magrittr) ("r-matrix" ,r-matrix) ("r-quadprog" ,r-quadprog) ("r-rcpp" ,r-rcpp))) @@ -28971,13 +29100,13 @@ are.") (define-public r-mlr3misc (package (name "r-mlr3misc") - (version "0.9.4") + (version "0.9.5") (source (origin (method url-fetch) (uri (cran-uri "mlr3misc" version)) (sha256 (base32 - "14lcpvxrrl68l3khmy5r266b7yjjlg97pz4xvha0ypx8hlpbqik2")))) + "1ax1mvnm8xjcskq12x63jkal766v1zwilpgrkdv6yawd7yrww4q9")))) (build-system r-build-system) (propagated-inputs `(("r-backports" ,r-backports) @@ -29022,13 +29151,13 @@ implemented as @code{R6} classes.") (define-public r-mlr3 (package (name "r-mlr3") - (version "0.12.0") + (version "0.13.0") (source (origin (method url-fetch) (uri (cran-uri "mlr3" version)) (sha256 (base32 - "0nimwczsgrj29r9qrlz32qc3fkj02369zql7jhkrn3lk3mfy5zmz")))) + "1729wbdp62cjjk775qxrahyskp191s9qqnmqbxncfjrpdxphxk34")))) (build-system r-build-system) (propagated-inputs `(("r-r6" ,r-r6) @@ -29058,13 +29187,13 @@ computational operations, add-on packages provide additional functionality.") (define-public r-mlr3learners (package (name "r-mlr3learners") - (version "0.5.0") + (version "0.5.1") (source (origin (method url-fetch) (uri (cran-uri "mlr3learners" version)) (sha256 (base32 - "1gkbbn5ah2iv4pv5q2jf4lrqkga744d4y9jlyhyjqf0x75y9wkg2")))) + "1yc3mrk1b9h1k342wnw7sm4zmcw7w31l5ybh558g88f5hmibdl98")))) (build-system r-build-system) (propagated-inputs `(("r-checkmate" ,r-checkmate) @@ -29347,14 +29476,14 @@ chunks.") (define-public r-clustree (package (name "r-clustree") - (version "0.4.3") + (version "0.4.4") (source (origin (method url-fetch) (uri (cran-uri "clustree" version)) (sha256 (base32 - "0lxydy2f83qqd5dhlp2l546jax759l43b29j6g82079yzg1szwsz")))) + "0vwmicajl7c0rmjdmf4f857fii0xrxz25vjkn888svlsikw00qbs")))) (properties `((upstream-name . "clustree"))) (build-system r-build-system) (propagated-inputs @@ -29415,14 +29544,14 @@ the font tool-set provided by the @code{systemfonts} package.") (define-public r-ragg (package (name "r-ragg") - (version "1.1.3") + (version "1.2.0") (source (origin (method url-fetch) (uri (cran-uri "ragg" version)) (sha256 (base32 - "0ppypfq1vipwjngmiwdx1sj6x7m41v3dlnbsixdlnrf2nx82kxb2")))) + "1wbk7vny8435ii3aak586imd0dgh4ri55kqypx5b10x6ygp32avb")))) (properties `((upstream-name . "ragg"))) (build-system r-build-system) (inputs @@ -29448,21 +29577,23 @@ AGG to use as alternative to the raster devices provided through the (define-public r-downlit (package (name "r-downlit") - (version "0.2.1") + (version "0.4.0") (source (origin (method url-fetch) (uri (cran-uri "downlit" version)) (sha256 (base32 - "0z4fz7c9kyd9v72wl3iqs2wxspi975d6b0rgjr9lvg8a18maa9z6")))) + "10zvrqdpwavdy97h3q26bqh3k63z61fmc04w9vwsnvmnv8hnh3vl")))) (properties `((upstream-name . "downlit"))) (build-system r-build-system) (propagated-inputs `(("r-brio" ,r-brio) + ("r-desc" ,r-desc) ("r-digest" ,r-digest) ("r-evaluate" ,r-evaluate) ("r-fansi" ,r-fansi) + ("r-memoise" ,r-memoise) ("r-rlang" ,r-rlang) ("r-vctrs" ,r-vctrs) ("r-yaml" ,r-yaml))) @@ -30114,14 +30245,14 @@ light-weight geometry library used by @url{http://postgis.net/,PostGIS}.") (define-public r-stars (package (name "r-stars") - (version "0.5-3") + (version "0.5-4") (source (origin (method url-fetch) (uri (cran-uri "stars" version)) (sha256 (base32 - "00cljaz98iy3wymabp7b47qgxdybg9jgjkw7q6da1ginmy14m524")))) + "1h5fway2fk637mkglw0h3ajiyyx8saqcapg42xzsiwbk8lnaf9f4")))) (properties `((upstream-name . "stars"))) (build-system r-build-system) (propagated-inputs @@ -30607,14 +30738,14 @@ in order to customise how it should change with time.") (define-public r-tzdb (package (name "r-tzdb") - (version "0.1.2") + (version "0.2.0") (source (origin (method url-fetch) (uri (cran-uri "tzdb" version)) (sha256 (base32 - "1sl8nacx2i1h9vcvggiyzwd2zwvgrvfvsv3xa9072br62gkpay2c")))) + "1afmav7s29fb5cd920h6vrzg9cvc4jsidfalxpvhlh1b8mfr0df3")))) (properties `((upstream-name . "tzdb"))) (build-system r-build-system) (propagated-inputs `(("r-cpp11" ,r-cpp11))) @@ -30635,14 +30766,14 @@ time zone manipulations.") (define-public r-vroom (package (name "r-vroom") - (version "1.5.5") + (version "1.5.6") (source (origin (method url-fetch) (uri (cran-uri "vroom" version)) (sha256 (base32 - "1zk5nk9y64lspwhsasb7d2yg8i6ihyg2slys1qqa6qpi1266hi8x")))) + "0b1lbi20gadwjwinw1v0az4g0y79vlcqfqyblphls601h3nnmn3p")))) (properties `((upstream-name . "vroom"))) (build-system r-build-system) (propagated-inputs @@ -30874,14 +31005,14 @@ package.") (define-public r-qs (package (name "r-qs") - (version "0.25.1") + (version "0.25.1.1") (source (origin (method url-fetch) (uri (cran-uri "qs" version)) (sha256 (base32 - "0qzrhc5jsygj813k956b00h4b6haynz44rk6a4v34fv4ywq9ba7w")))) + "077i181vh0izvsdy2d4366yir0ajg531g6d1s7ab044ssbphg38x")))) (properties `((upstream-name . "qs"))) (build-system r-build-system) (inputs `(("zlib" ,zlib))) @@ -30984,14 +31115,14 @@ Tensorflow graphs.") (define-public r-tensorflow (package (name "r-tensorflow") - (version "2.6.0") + (version "2.7.0") (source (origin (method url-fetch) (uri (cran-uri "tensorflow" version)) (sha256 (base32 - "1lkzxc3b5gkcg4hwqr57cysplcba6ff44qz8lbvk19kxnrhjaf9g")))) + "0xgm8jb1hl8564vviqys3aqwzvfbh0d43m154cj07j9spdz306ng")))) (properties `((upstream-name . "tensorflow"))) (build-system r-build-system) (inputs `(("tensorflow" ,tensorflow))) @@ -31015,14 +31146,14 @@ between them.") (define-public r-keras (package (name "r-keras") - (version "2.6.1") + (version "2.7.0") (source (origin (method url-fetch) (uri (cran-uri "keras" version)) (sha256 (base32 - "0xg4n9sp1pf2yfbba3lb3fzr5gbdwlhv4j1h5njfqmjy5984b8ij")))) + "004z9aajc0b7lw7g68ri7ndabdwbylmnlyvmziljmm29z6fzk8y5")))) (properties `((upstream-name . "keras"))) (build-system r-build-system) (propagated-inputs @@ -31077,14 +31208,14 @@ files, images, movie formats, etc., etc.) through an R session.") (define-public r-ztree (package (name "r-ztree") - (version "1.0.6") + (version "1.0.7") (source (origin (method url-fetch) (uri (cran-uri "zTree" version)) (sha256 (base32 - "1mywxrx6bw7dzhrdwyxbjzc8ikgvw423zycyji0jjr69cfhpmywv")))) + "005zk6wpchpss6865ki35yawgf668pn70163ah97rnfkhfaswm6y")))) (properties `((upstream-name . "zTree"))) (build-system r-build-system) (propagated-inputs @@ -31295,14 +31426,14 @@ fully reproducible.") (define-public r-paws-common (package (name "r-paws-common") - (version "0.3.13") + (version "0.3.14") (source (origin (method url-fetch) (uri (cran-uri "paws.common" version)) (sha256 (base32 - "15sj7yw4hj76minr00xhgzkg1rwb7gsr2ib9q4d053i5f3jcy54a")))) + "013yiki3bjx0np577wy17ikfxdr2hiv6sd10anv281r108kldm1x")))) (properties `((upstream-name . "paws.common"))) (build-system r-build-system) (propagated-inputs @@ -31943,14 +32074,14 @@ convert dates to MMWR day, week, and year and the reverse.") (define-public r-crul (package (name "r-crul") - (version "1.1.0") + (version "1.2.0") (source (origin (method url-fetch) (uri (cran-uri "crul" version)) (sha256 (base32 - "1kjsc5gkx5k5cfwlfjp2cjm9cdzq2l1m68bnrjmahw3lkz8wzdph")))) + "133g0skz4lifl8hm8pqdryd2m2drbrm6mdfzbbsrw8fg46di86my")))) (properties `((upstream-name . "crul"))) (build-system r-build-system) (propagated-inputs @@ -31969,6 +32100,110 @@ requests, and mocking HTTP requests. The package is built on R6, and takes inspiration from Ruby's @code{faraday} gem.") (license license:expat))) +(define-public r-gistr + (package + (name "r-gistr") + (version "0.9.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "gistr" version)) + (sha256 + (base32 + "0ac9ikrdg6i8xvlma0gizvsdva46408lk7hvsgkqirhy2ljy02hp")))) + (properties `((upstream-name . "gistr"))) + (build-system r-build-system) + (propagated-inputs + `(("r-assertthat" ,r-assertthat) + ("r-crul" ,r-crul) + ("r-dplyr" ,r-dplyr) + ("r-httr" ,r-httr) + ("r-jsonlite" ,r-jsonlite) + ("r-knitr" ,r-knitr) + ("r-magrittr" ,r-magrittr) + ("r-rmarkdown" ,r-rmarkdown))) + (native-inputs `(("r-knitr" ,r-knitr))) + (home-page "https://github.com/ropensci/gistr") + (synopsis "Work with Gists in browser") + (description + "This package allows the user to create new Github gists, update gists +with new files, rename files, delete files, get and delete gists, star and +un-star them, fork them, open a gist in your default browser, get an embed +code for a gist, list gist commits, and get rate limit information when +authenticated.") + (license license:expat))) + +(define-public r-rbokeh + (package + (name "r-rbokeh") + (version "0.5.2") + (source + (origin + (method url-fetch) + (uri (cran-uri "rbokeh" version)) + (sha256 + (base32 + "1h2fpzqf17pw9d09r1g1iyxsj5qma4fsk8vnar7f1z4fjyypvi6q")) + (snippet + '(for-each delete-file '("inst/htmlwidgets/lib/bokehjs/bokeh-widgets.min.js" + "inst/htmlwidgets/lib/bokehjs/bokeh.min.js"))))) + (properties `((upstream-name . "rbokeh"))) + (build-system r-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'process-javascript + (lambda* (#:key inputs #:allow-other-keys) + (with-directory-excursion "inst/htmlwidgets/lib/bokehjs" + (let ((mapping + `((,(assoc-ref inputs "js-bokeh-widgets") + . "bokeh-widgets.min.js") + (,(assoc-ref inputs "js-bokeh") + . "bokeh.min.js")))) + (for-each (lambda (source target) + (format #true "Processing ~a --> ~a~%" + source target) + (invoke "esbuild" source "--minify" + (string-append "--outfile=" target))) + (map car mapping) + (map cdr mapping))))))))) + (propagated-inputs + `(("r-digest" ,r-digest) + ("r-gistr" ,r-gistr) + ("r-hexbin" ,r-hexbin) + ("r-htmlwidgets" ,r-htmlwidgets) + ("r-jsonlite" ,r-jsonlite) + ("r-lazyeval" ,r-lazyeval) + ("r-magrittr" ,r-magrittr) + ("r-maps" ,r-maps) + ("r-pryr" ,r-pryr) + ("r-scales" ,r-scales))) + ;; Version 0.12.15 is mentioned in lib/htmlwidgets/rbokeh.yaml. + (native-inputs + `(("esbuild" ,esbuild) + ("js-bokeh-widgets" + ,(origin + (method url-fetch) + (uri "https://unpkg.com/bokehjs@0.12.15/build/js/bokeh-widgets.js") + (sha256 + (base32 + "07v9lrkfcbdznpb10qqwi4m660zp65g85vlnfw7kn83zmkxkhhxy")))) + ("js-bokeh" + ,(origin + (method url-fetch) + (uri "https://unpkg.com/bokehjs@0.12.15/build/js/bokeh.js") + (sha256 + (base32 + "1pq0059aad7d2jv50nv9449p3w0gbkxkl0mhblc76m5d9qjqav2q")))) + ("r-knitr" ,r-knitr))) + (home-page "https://cran.r-project.org/web/packages/rbokeh/") + (synopsis "R interface for the Bokeh visualization library") + (description + "This package provides a native R plotting library that provides a +flexible declarative interface for creating interactive web-based graphics, +backed by the @url{https://bokeh.pydata.org/, Bokeh visualization library}.") + (license license:expat))) + (define-public r-fauxpas (package (name "r-fauxpas") diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm index a817e1f9e2..6b552f688f 100644 --- a/gnu/packages/databases.scm +++ b/gnu/packages/databases.scm @@ -3807,7 +3807,7 @@ the SQL language using a syntax that reflects the resulting query.") (define-public apache-arrow (package (name "apache-arrow") - (version "5.0.0") + (version "6.0.1") (source (origin (method git-fetch) @@ -3817,7 +3817,7 @@ the SQL language using a syntax that reflects the resulting query.") (file-name (git-file-name name version)) (sha256 (base32 - "0275aayzy78nbxzbj93w5152sv5q2c7020ijxnf8b58v9qwfxzz0")))) + "0mcw361akqw4sxnnpnr9c9v1zk4hphk6gcq763pcb19yzljh88ig")))) (build-system cmake-build-system) (arguments `(#:tests? #f @@ -3856,6 +3856,10 @@ the SQL language using a syntax that reflects the resulting query.") "-DARROW_DEPENDENCY_SOURCE=SYSTEM" "-Dxsimd_SOURCE=SYSTEM" + "-DARROW_RUNTIME_SIMD_LEVEL=NONE" + "-DARROW_SIMD_LEVEL=NONE" + "-DARROW_PACKAGE_KIND=Guix" + ;; Split output into its component packages. (string-append "-DCMAKE_INSTALL_PREFIX=" (assoc-ref %outputs "lib")) @@ -3897,23 +3901,25 @@ the SQL language using a syntax that reflects the resulting query.") ;;"-DBENCHMARK_ENABLE_TESTING=OFF" "-DARROW_BUILD_STATIC=OFF"))) (inputs - `(("apache-thrift" ,apache-thrift "lib") - ("boost" ,boost) + `(("boost" ,boost) ("brotli" ,brotli) ("bzip2" ,bzip2) ("double-conversion" ,double-conversion) ("gflags" ,gflags) ("glog" ,glog) ("grpc" ,grpc) - ("lz4" ,lz4) ("protobuf" ,protobuf) ("python-3" ,python) ("python-numpy" ,python-numpy) ("rapidjson" ,rapidjson) ("re2" ,re2) ("snappy" ,snappy) + ("xsimd" ,xsimd))) + ;; These are all listed under Requires.private in arrow.pc + (propagated-inputs + `(("apache-thrift" ,apache-thrift "lib") + ("lz4" ,lz4) ("utf8proc" ,utf8proc) - ("xsimd" ,xsimd) ("zlib" ,zlib) ("zstd" ,zstd "lib"))) (native-inputs diff --git a/gnu/packages/dav.scm b/gnu/packages/dav.scm index 9d18d94996..712149f173 100644 --- a/gnu/packages/dav.scm +++ b/gnu/packages/dav.scm @@ -3,6 +3,7 @@ ;;; Copyright © 2018, 2019 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2020 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2020 Vinicius Monego <monego@posteo.net> +;;; Copyright © 2021 Tanguy Le Carrour <tanguy@bioneland.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -117,13 +118,13 @@ efficient syncing (package (name "vdirsyncer") ;; When updating, check whether python-click-5 can be removed entirely. - (version "0.16.8") + (version "0.18.0") (source (origin (method url-fetch) (uri (pypi-uri name version)) (sha256 (base32 - "1i8kp9j99rs8xdhrc1vx749zd9wznlzj0pb3s05xdm71a8pl5nxz")))) + "00f2bw1a2jbbd1sbci0swnd67kylr341aa9rpbxkajbp3zakxg17")))) (build-system python-build-system) (arguments `(#:tests? #f ; The test suite is very flakey. diff --git a/gnu/packages/dictionaries.scm b/gnu/packages/dictionaries.scm index b8bde241f7..75f1b1bed4 100644 --- a/gnu/packages/dictionaries.scm +++ b/gnu/packages/dictionaries.scm @@ -308,18 +308,20 @@ translation engines from your terminal.") (define-public lttoolbox (package (name "lttoolbox") - (version "3.5.3") + (version "3.5.4") (source (origin (method url-fetch) (uri (string-append "https://github.com/apertium/lttoolbox/releases/download/v" - version "/lttoolbox-" version ".tar.bz2")) + version "/lttoolbox-" version ".tar.xz")) (sha256 - (base32 "109l91ailish1a3vya5zmfg3kb67cwyzl36ndnh8f59chsbm6n2f")))) + (base32 "0kn9xg9sc64amd6ah5gi4qij0bhfbmc2jjvxbjjrsdd8iq054cgm")))) (build-system gnu-build-system) (arguments - `(#:phases + `(#:configure-flags + (list "--disable-static") + #:phases (modify-phases %standard-phases (replace 'bootstrap ;; The included ./autogen.sh unconditionally runs ./configure before diff --git a/gnu/packages/diffoscope.scm b/gnu/packages/diffoscope.scm index 07b3d1444b..f0197817a6 100644 --- a/gnu/packages/diffoscope.scm +++ b/gnu/packages/diffoscope.scm @@ -73,7 +73,7 @@ (define-public diffoscope (package (name "diffoscope") - (version "192") + (version "194") (source (origin (method git-fetch) @@ -82,7 +82,7 @@ (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "1anj90r7nvdd7vscx27xnh7vivhq16gxg9cffpwb4w7i02ij5w6b")) + (base32 "106ynj34cp5kcqdxrsb4cyskf0lv0sdghyayq1xiardy4p4jafcr")) (patches (search-patches "diffoscope-fix-llvm-test.patch")))) (build-system python-build-system) diff --git a/gnu/packages/django.scm b/gnu/packages/django.scm index a179f43934..73c5244655 100644 --- a/gnu/packages/django.scm +++ b/gnu/packages/django.scm @@ -49,13 +49,13 @@ (define-public python-django (package (name "python-django") - (version "3.2.6") + (version "3.2.9") (source (origin (method url-fetch) (uri (pypi-uri "Django" version)) (sha256 (base32 - "08p0gf1n548fjba76wspcj1jb3li6lr7xi87w2xq7hylr528azzj")))) + "023ag89799z53034ya71b636gih7ldvgdgfc0zdzqbsjy4046a2i")))) (build-system python-build-system) (arguments '(#:phases @@ -1270,13 +1270,13 @@ to ElasticSearch.") (define-public python-django-netfields (package (name "python-django-netfields") - (version "1.2.2") + (version "1.2.4") (source (origin (method url-fetch) (uri (pypi-uri "django-netfields" version)) (sha256 (base32 - "1c47azr5am0q8g45x0fbn0cay7vyrack6n7k6siliw1j2p0gzi7s")))) + "0jwlbyaxk91fq69g2y0zpfjgmjgh6l0lqm5mhys7m5968lkihvgp")))) (build-system python-build-system) (arguments '(#:tests? #f)) ;XXX: Requires a running PostgreSQL server (propagated-inputs diff --git a/gnu/packages/dns.scm b/gnu/packages/dns.scm index 7de16a94a5..1b785f2c83 100644 --- a/gnu/packages/dns.scm +++ b/gnu/packages/dns.scm @@ -875,16 +875,16 @@ served by AS112. Stub and forward zones are supported.") (define-public yadifa (package (name "yadifa") - (version "2.5.1") + (version "2.5.3") (source - (let ((build "10306")) + (let ((build "10333")) (origin (method url-fetch) (uri (string-append "https://www.yadifa.eu/sites/default/files/releases/" "yadifa-" version "-" build ".tar.gz")) (sha256 - (base32 "051h4pmh9llwj0w6h0v8fl2f146fb26cv3w5an9dmfh845sv6hzr"))))) + (base32 "1mwy6sfnlaslx26f3kpj9alh8i8y8bf1nbnsdd5j04hjsbavd07p"))))) (build-system gnu-build-system) (native-inputs `(("which" ,which))) @@ -896,15 +896,13 @@ served by AS112. Stub and forward zones are supported.") (add-before 'configure 'omit-example-configurations (lambda _ (substitute* "Makefile.in" - ((" (etc|var)") "")) - #t)) + ((" (etc|var)") "")))) (add-after 'configure 'omit-spurious-references (lambda _ ;; The many Makefile.in grep this(!) to #define BUILD_OPTIONS. (substitute* "config.log" (("(=/gnu/store/)[^-]*" _ match) - (string-append match "..."))) - #t))) + (string-append match "...")))))) #:configure-flags (list "--sysconfdir=/etc" "--localstatedir=/var" diff --git a/gnu/packages/ebook.scm b/gnu/packages/ebook.scm index 61017ec733..deb001862c 100644 --- a/gnu/packages/ebook.scm +++ b/gnu/packages/ebook.scm @@ -9,6 +9,7 @@ ;;; Copyright © 2020, 2021 Vinicius Monego <monego@posteo.net> ;;; Copyright © 2020 Zheng Junjie <873216071@qq.com> ;;; Copyright © 2021 la snesne <lasnesne@lagunposprasihopre.org> +;;; Copyright © 2021 Petr Hodina <phodina@protonmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -35,6 +36,7 @@ #:use-module (guix build-system gnu) #:use-module (guix build-system meson) #:use-module (guix build-system python) + #:use-module (guix build-system qt) #:use-module (gnu packages) #:use-module (gnu packages autotools) #:use-module (gnu packages compression) @@ -376,6 +378,42 @@ e-books for convenient reading.") accessing and converting various ebook file formats.") (license license:expat))) +(define-public inkbox + (package + (name "inkbox") + (version "1.7") + (source + (origin + (method git-fetch) + (uri + (git-reference + (url "https://alpinekobox.ddns.net/InkBox/inkbox/") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "126cqn0ixcn608lv2hd9f7zmzj4g448bnpxc7wv9cvg83qqajh5n")))) + (build-system qt-build-system) + (arguments + '(#:tests? #f ; no test suite + #:make-flags + (list (string-append "PREFIX=" + (assoc-ref %outputs "out"))) + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'prefix-opt + (lambda* (#:key outputs #:allow-other-keys) + (substitute* "inkbox.pro" + (("/opt/\\$\\$\\{TARGET\\}") (string-append (assoc-ref outputs "out")))))) + (replace 'configure + (lambda* (#:key make-flags #:allow-other-keys) + (apply invoke (cons "qmake" make-flags))))))) + (native-inputs + `(("qtbase" ,qtbase-5))) + (home-page "https://alpinekobox.ddns.net/InkBox/inkbox/") + (synopsis "EBook reader") + (description "This package provides InkBox eBook reader.") + (license license:gpl3))) + (define-public liblinebreak (package (name "liblinebreak") diff --git a/gnu/packages/emacs-xyz.scm b/gnu/packages/emacs-xyz.scm index b6381957f8..be46389319 100644 --- a/gnu/packages/emacs-xyz.scm +++ b/gnu/packages/emacs-xyz.scm @@ -104,6 +104,7 @@ ;;; Copyright © 2021 Noisytoot <noisytoot@disroot.org> ;;; Copyright © 2021 Simon South <simon@simonsouth.net> ;;; Copyright © 2021 la snesne <lasnesne@lagunposprasihopre.org> +;;; Copyright © 2021 Brian Kubisiak <brian@kubisiak.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -2937,7 +2938,7 @@ of bibliographic references.") (define-public emacs-corfu (package (name "emacs-corfu") - (version "0.15") + (version "0.16") (source (origin (method git-fetch) @@ -2946,7 +2947,7 @@ of bibliographic references.") (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "0crk5dryaqqj36fjcsxi0gd924125p0yghvg5anwj38zjqg1rqm9")))) + (base32 "0al8jsdih6b6y26lwg8lwld35flh7q3539f4k1nz6is3xfqxbahz")))) (build-system emacs-build-system) (home-page "https://github.com/minad/corfu") (synopsis "Completion overlay region function") @@ -4118,7 +4119,7 @@ files and directories.") (define-public emacs-fountain-mode (package (name "emacs-fountain-mode") - (version "3.5.3") + (version "3.6.0") (source (origin (method git-fetch) @@ -4127,7 +4128,7 @@ files and directories.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "13k84dzjar67fa1ixicl6h8gxzblszd0ik8vi11bvipysgp3j3ws")))) + (base32 "14cb4r23pn98sxzh0qwjwpvm7k7q9hhpks8avydccwssm69x1s1w")))) (build-system emacs-build-system) (home-page "https://github.com/rnkn/fountain-mode") (synopsis "Major mode for screenwriting in Fountain markup") @@ -5293,29 +5294,26 @@ method and constant name completion.") (license license:gpl3+))) (define-public emacs-robot-mode - (let ((commit "32846e7e80ae3471b7c07f9709dcaa4f9b9ed4a0") - (revision "1")) - (package - (name "emacs-robot-mode") - (version (git-version "0.0.0" revision commit)) - (source (origin - (method git-fetch) - (uri (git-reference - ;; A better maintained fork of robot-mode. - (url "https://github.com/jvalkeejarvi/robot-mode") - (commit commit))) - (file-name (git-file-name name version)) - (sha256 - (base32 - "1i8wf7m0gml8zvvmlgppjzv78b432686p1qdbzgclc7qfcvzag0d")))) - (build-system emacs-build-system) - (propagated-inputs `(("emacs-s" ,emacs-s))) - (home-page "https://github.com/jvalkeejarvi/robot-mode") - (synopsis "Emacs mode for Robot Framework") - (description "This major mode facilitates editing Robot Framework source -files with features such as syntax highlighting, comments, finding keywords, -completing keywords and smart indentation.") - (license license:gpl3+)))) + (package + (name "emacs-robot-mode") + (version "0.6.1") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/kopoli/robot-mode") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "127lydk66n90ih39q8gxzb44rss2xllb7bn3ygxrf5m5vvl9w5rj")))) + (build-system emacs-build-system) + (home-page "https://github.com/kopoli/robot-mode") + (synopsis "Emacs mode for Robot Framework") + (description + "This major mode facilitates editing Robot Framework source files with +features such as syntax highlighting, comments, finding keywords, completing +keywords and smart indentation.") + (license license:gpl3+))) (define-public emacs-roguel-ike (package @@ -8386,7 +8384,7 @@ list of candidates.") (define-public emacs-consult-notmuch (package (name "emacs-consult-notmuch") - (version "0.5") + (version "0.6") (source (origin (method git-fetch) @@ -8395,7 +8393,7 @@ list of candidates.") (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "04ha4mysxvfz6yzbkgrl1mcwic1lwr1xx6gdy5rl6hn1wwnwam4p")))) + (base32 "07qbm5p4cfrrwyp8a5sw0wkdhnqbappz4xjlnjil2krhj9g39q78")))) (build-system emacs-build-system) (propagated-inputs `(("emacs-consult" ,emacs-consult) @@ -10308,7 +10306,7 @@ with Elfeed.") (define-public emacs-elfeed-score (package (name "emacs-elfeed-score") - (version "1.2.0") + (version "1.2.1") (source (origin (method git-fetch) @@ -10317,7 +10315,7 @@ with Elfeed.") (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "0b49sd0h1idx3p5p9zqb3p5ni4i43fyikfkg70fs5iqjcl0vmz7c")))) + (base32 "10wsjq2zd6kz9182gnkjzlzywx16j29dgm1gzwynr79xmvgs4r2b")))) (build-system emacs-build-system) (propagated-inputs `(("emacs-elfeed" ,emacs-elfeed))) @@ -11069,7 +11067,7 @@ ack, ag, helm and pt.") (define-public emacs-helm (package (name "emacs-helm") - (version "3.8.1") + (version "3.8.2") (source (origin (method git-fetch) @@ -11078,7 +11076,7 @@ ack, ag, helm and pt.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "1yfr2vz1kd21rvnxi8xzv67gs5r599fhjmw8qphsmpv5afscfl7k")))) + (base32 "1xkxlbjpqhfhakmfi664cq7i5968941vpngq94napmhbgqydp4qn")))) (build-system emacs-build-system) (propagated-inputs `(("emacs-async" ,emacs-async) @@ -12297,27 +12295,54 @@ passive voice.") (define-public emacs-org (package (name "emacs-org") - (version "9.5") + (version "9.5.1") (source (origin - (method url-fetch) - (uri (string-append "https://elpa.gnu.org/packages/org-" version ".tar")) + (method git-fetch) + (uri (git-reference + (url "https://git.savannah.gnu.org/git/emacs/org-mode.git") + (commit (string-append "release_" version)))) + (file-name (git-file-name name version)) (sha256 - (base32 "16cflg5nms5nb8w86nvwkg49zkl0rvdhigkf4xpvbs0v7zb5y3ky")))) + (base32 "0ajig1sb4zxffx3lv7l7xvsf77qgs3s7pm2ylxa3wanwmpk3gvcg")))) (build-system emacs-build-system) (arguments - `(#:phases + `(#:tests? #t + #:test-command '("make" "test-dirty") + #:phases (modify-phases %standard-phases - (add-after 'install 'install-documentation + (delete 'build) + (add-before 'check 'make + (lambda _ + (invoke "make" (string-append "ORGVERSION=" ,version)))) + (replace 'install (lambda* (#:key outputs #:allow-other-keys) - (let* ((share (string-append (assoc-ref outputs "out") "/share")) - (info-dir (string-append share "/info")) - (doc-dir (string-append share "/doc/" ,name "-" ,version))) - (install-file "org.info" info-dir) - (install-file "orgguide.info" info-dir) - ;; XXX: "orgcard.pdf" is not built in Org 9.5. - ;; (install-file "orgcard.pdf" doc-dir) - )))))) + (substitute* "local.mk" + (("^prefix.*") + (string-append "prefix = " (assoc-ref outputs "out"))) + (("^lispdir.*") + (string-append "lispdir = " + (elpa-directory (assoc-ref outputs "out"))))) + ;; The dependent targets for install perform cleanup that + ;; partially undoes our make phase + (substitute* "lisp/Makefile" + (("^install:.*") "install:\n")) + (invoke "make" "install"))) + (add-after 'unpack 'fix-tests + (lambda* (#:key inputs #:allow-other-keys) + ;; These files are modified during testing + (with-directory-excursion "testing/examples" + (for-each make-file-writable + '("babel.org" + "ob-awk-test.org" + "ob-sed-test.org" + "ob-shell-test.org")) + ;; Specify where sh is + (substitute* "babel.org" + (("/bin/sh" sh) + (string-append (assoc-ref inputs "bash") sh))))))))) + (native-inputs + `(("texinfo" ,texinfo))) (home-page "https://orgmode.org/") (synopsis "Outline-based notes management and organizer") (description "Org is an Emacs mode for keeping notes, maintaining TODO @@ -12846,6 +12871,30 @@ files in Emacs. Files of this type (e.g., @file{BUILD.gn} or @file{*.gni}) are common in Chromium-derived projects.") (license license:bsd-3))) +(define-public emacs-bazel + ;; From 2021-11-21. + ;; No releases available. + (let ((commit "cdb2643dba39fe2bd64ba3b190b94d1ef1d83b18") + (revision "0")) + (package + (name "emacs-bazel") + (version (git-version "0" revision commit)) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/bazelbuild/emacs-bazel-mode") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0ln06dprnivx9zxm6n23ppyx7x4kbn0f85pxwvkq32aq7wnqz82m")))) + (build-system emacs-build-system) + (home-page "https://github.com/bazelbuild/emacs-bazel-mode") + (synopsis "Bazel support for Emacs") + (description + "This package provides support for the Bazel build system. See +@uref{https://bazel.build/} for background on Bazel.") + (license license:asl2.0)))) + (define-public emacs-gntp (package (name "emacs-gntp") @@ -13817,7 +13866,7 @@ reached with the right hand.") (define-public emacs-csharp-mode (package (name "emacs-csharp-mode") - (version "1.1.0") + (version "1.1.1") (source (origin (method git-fetch) @@ -13826,7 +13875,7 @@ reached with the right hand.") (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "0xadchhbfikw2vac6kqkmdjjixhybxqqf99cpl089cga9sjc7i5p")))) + (base32 "0wfd4jdjsq8qp6pavf25y87dxvlnsqapfi4c4m3xj24baalr2dpq")))) (build-system emacs-build-system) (home-page "https://github.com/josteink/csharp-mode") (synopsis "Major mode for C# code") @@ -13965,13 +14014,13 @@ containing words from the Rime project.") (define-public emacs-pyim (package (name "emacs-pyim") - (version "3.9.4") + (version "3.9.5") (source (origin (method url-fetch) (uri (string-append "https://elpa.gnu.org/packages/pyim-" version ".tar")) (sha256 - (base32 "0ggnl2jidcklyhqd5av5kk1f855gsq29wq2nhvp1yjzn35hz6xij")))) + (base32 "1dj46yprbl3l6n83aj0hsnd0rwjcp4ypyg2nhwig39wxirwlf9an")))) (build-system emacs-build-system) (propagated-inputs `(("emacs-async" ,emacs-async) @@ -14032,14 +14081,14 @@ methods from a given list.") (define-public emacs-posframe (package (name "emacs-posframe") - (version "1.1.1") + (version "1.1.2") (source (origin (method url-fetch) (uri (string-append "https://elpa.gnu.org/packages/" "posframe-" version ".tar")) (sha256 - (base32 "13bx8vd3dw4jvwrys1vyq3a65rjjsbsvi6jxiffp647aclwwfcjs")))) + (base32 "0vrv46v7qwmax5m1i6b7lwdh789dfr18ggxjl4bk05qn7waway6j")))) (build-system emacs-build-system) ;; emacs-minimal does not include the function font-info. (arguments @@ -17428,28 +17477,33 @@ a heuristic based on frequency and recency.") (license license:gpl3+)))) (define-public emacs-org-recent-headings - (package - (name "emacs-org-recent-headings") - (version "0.1") - (source (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/alphapapa/org-recent-headings") - (commit version))) - (file-name (git-file-name name version)) - (sha256 - (base32 - "0gsrzmg3mssh9s28yjm9m866fnhm1pcligssz1q6brga6dm6f2yy")))) - (build-system emacs-build-system) - (propagated-inputs - `(("emacs-org" ,emacs-org) - ("emacs-dash" ,emacs-dash) - ("emacs-frecency" ,emacs-frecency))) - (home-page "https://github.com/alphapapa/org-recent-headings") - (synopsis "Navigate to recently used Org headings and lists") - (description "This package maintains a list of recently used Org headings, + (let ((commit "97418d581ea030f0718794e50b005e9bae44582e") + (revision "0")) + (package + (name "emacs-org-recent-headings") + (version (git-version "0.1" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/alphapapa/org-recent-headings") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1y11rlnhi36lzhc1cagninv6hlcwbvj88xfr0g0xzpbzy7hys021")))) + (build-system emacs-build-system) + (propagated-inputs + `(("emacs-dash" ,emacs-dash) + ("emacs-frecency" ,emacs-frecency) + ("emacs-helm" ,emacs-helm) + ("emacs-org" ,emacs-org) + ("emacs-s" ,emacs-s))) + (home-page "https://github.com/alphapapa/org-recent-headings") + (synopsis "Navigate to recently used Org headings and lists") + (description + "This package maintains a list of recently used Org headings, as well as functions for navigating between these headings.") - (license license:gpl3+))) + (license license:gpl3+)))) (define-public emacs-org-super-agenda (package @@ -17629,7 +17683,7 @@ according to a parsing expression grammar.") (define-public emacs-eldev (package (name "emacs-eldev") - (version "0.10.1") + (version "0.10.3") (source (origin (method git-fetch) @@ -17638,7 +17692,7 @@ according to a parsing expression grammar.") (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "0ff74scwmixyawsdypvix0cchsbp1d9ac95ym96b4f8hj5gijjms")))) + (base32 "1y8vz5grmlhln37lf93a3gxwh46ar0v3jj2dcvzkb36lqf1snq73")))) (build-system emacs-build-system) (arguments `(#:tests? #t @@ -17908,7 +17962,6 @@ automatically fetched from well-curated sources, and formatted as BibTeX.") (build-system emacs-build-system) (propagated-inputs `(("emacs-auctex" ,emacs-auctex) - ("emacs-helm-bibtex" ,emacs-helm-bibtex) ("emacs-org" ,emacs-org) ("emacs-parsebib" ,emacs-parsebib) ("emacs-s" ,emacs-s))) @@ -21927,7 +21980,7 @@ source code.") (define-public emacs-rustic (package (name "emacs-rustic") - (version "2.1") + (version "2.2") (source (origin (method git-fetch) @@ -21936,7 +21989,7 @@ source code.") (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "0nklqpd24s83ng34xrm4rp80sbylajikj6svz1c6j721pz9crxg9")))) + (base32 "0i72r0kb6f96py3vbprcingik9sy5bndnd19hb9x3yzv1f7r0zfp")))) (build-system emacs-build-system) (propagated-inputs `(("emacs-dash" ,emacs-dash) @@ -25545,14 +25598,14 @@ well as an option for visually flashing evaluated s-expressions.") (define-public emacs-tramp (package (name "emacs-tramp") - (version "2.5.1.4") + (version "2.5.1.5") (source (origin (method url-fetch) (uri (string-append "https://elpa.gnu.org/packages/" "tramp-" version ".tar")) (sha256 - (base32 "0mk9r9hj43klah7mwldg4bw7fxcqvrbwv1gj6g90zdfsflqy7nh9")))) + (base32 "1g3xf97q5h6sr67w9bphcbbqx9jz2lbl8lij5rz1r0zbsnlcv7n8")))) (build-system emacs-build-system) (arguments `(#:emacs ,emacs ;need D-Bus @@ -27566,27 +27619,25 @@ posframe to show its candidate menu.") (license license:gpl3+))) (define-public emacs-shackle - (let ((commit "7ccbe513852a1d1700b698547efca14b8940319d") - (revision "1")) - (package - (name "emacs-shackle") - (version (git-version "1.0.3" revision commit)) - (source - (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/wasamasa/shackle") - (commit commit))) - (file-name (git-file-name name version)) - (sha256 - (base32 - "0agsp8ia4irr540r898ifhjqp28n1zsq1pilv1kc272spn3qhvp9")))) - (build-system emacs-build-system) - (synopsis "Enforce rules for popups") - (description "This package provides a global minor mode in which users + (package + (name "emacs-shackle") + (version "1.0.4") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://depp.brause.cc/shackle.git") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0s4br59zpd5qq7z9074ddq9lmwnddq2ixijwi666wp5gxw45fpgg")))) + (build-system emacs-build-system) + (synopsis "Enforce rules for popups") + (description + "This package provides a global minor mode in which users can specify how popup-displaying functions occupy the screen.") - (home-page "https://github.com/wasamasa/shackle") - (license license:gpl3+)))) + (home-page "https://depp.brause.cc/shackle") + (license license:gpl3+))) (define-public emacs-showtip (let ((commit "930da302809a4257e8d69425455b29e1cc91949b") @@ -28787,7 +28838,7 @@ personal wiki.") (define-public emacs-org-roam-bibtex (package (name "emacs-org-roam-bibtex") - (version "0.6.0") + (version "0.6.1") (source (origin (method git-fetch) @@ -28796,7 +28847,7 @@ personal wiki.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "04vc2w7x2lyamp0qa1y274smsf9x2qxr1igrpz9f4y5ha5332px5")))) + (base32 "1d09y923d9n5v7m201myba85m4064s2hdy3pgzssy70mjncg3m1g")))) (build-system emacs-build-system) (propagated-inputs `(("emacs-helm-bibtex" ,emacs-helm-bibtex) @@ -29796,7 +29847,7 @@ and preferred services can easily be configured.") (define-public emacs-vertico (package (name "emacs-vertico") - (version "0.16") + (version "0.17") (source (origin (method git-fetch) @@ -29805,7 +29856,7 @@ and preferred services can easily be configured.") (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "1w5i8qmh3sivqqaq3zygx1fw16s56p4nwm22d33j6inn7l9n5zsm")))) + (base32 "0fc1w8lwmnx8qfrdanxa6ma9qyps92gvqqklydh4cdcsdinss7kb")))) (build-system emacs-build-system) (arguments `(#:phases diff --git a/gnu/packages/emacs.scm b/gnu/packages/emacs.scm index fbd9ff96f0..e524949660 100644 --- a/gnu/packages/emacs.scm +++ b/gnu/packages/emacs.scm @@ -18,7 +18,7 @@ ;;; Copyright © 2018, 2019, 2021 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2019 Jesse John Gildersleve <jessejohngildersleve@zohomail.eu> ;;; Copyright © 2019 Valentin Ignatev <valentignatev@gmail.com> -;;; Copyright © 2019 Liliana Marie Prikler <liliana.prikler@gmail.com> +;;; Copyright © 2019, 2021 Liliana Marie Prikler <liliana.prikler@gmail.com> ;;; Copyright © 2019 Amin Bandali <bandali@gnu.org> ;;; Copyright © 2020 Jack Hill <jackhill@jackhill.us> ;;; Copyright © 2020 Morgan Smith <Morgan.J.Smith@outlook.com> @@ -54,6 +54,7 @@ #:use-module (gnu packages fribidi) #:use-module (gnu packages gd) #:use-module (gnu packages gettext) + #:use-module (gnu packages ghostscript) #:use-module (gnu packages glib) #:use-module (gnu packages gnome) ; for librsvg #:use-module (gnu packages gtk) @@ -63,6 +64,7 @@ #:use-module (gnu packages mail) ; for mailutils #:use-module (gnu packages multiprecision) #:use-module (gnu packages ncurses) + #:use-module (gnu packages pdf) #:use-module (gnu packages pkg-config) #:use-module (gnu packages texinfo) #:use-module (gnu packages tls) @@ -129,7 +131,7 @@ #:phases (modify-phases %standard-phases (add-after 'unpack 'patch-program-file-names - (lambda _ + (lambda* (#:key inputs #:allow-other-keys) (substitute* '("src/callproc.c" "lisp/term.el" "lisp/htmlfontify.el" @@ -137,6 +139,23 @@ "lisp/progmodes/sh-script.el") (("\"/bin/sh\"") (format #f "~s" (which "sh")))) + (substitute* "lisp/doc-view.el" + (("\"(gs|dvipdf|ps2pdf)\"" all what) + (let ((ghostscript (assoc-ref inputs "ghostscript"))) + (if ghostscript + (string-append "\"" ghostscript "/bin/" what "\"") + all))) + (("\"(pdftotext)\"" all what) + (let ((poppler (assoc-ref inputs "poppler"))) + (if poppler + (string-append "\"" poppler "/bin/" what "\"") + all)))) + ;; match ".gvfs-fuse-daemon-real" and ".gvfsd-fuse-real" + ;; respectively when looking for GVFS processes. + (substitute* "lisp/net/tramp-gvfs.el" + (("\\(tramp-compat-process-running-p \"(.*)\"\\)" all process) + (format #f "(or ~a (tramp-compat-process-running-p ~s))" + all (string-append "." process "-real")))) #t)) (add-before 'configure 'fix-/bin/pwd (lambda _ @@ -167,8 +186,11 @@ (with-output-to-file (string-append lisp-dir "/site-start.el") (lambda () (display - (string-append "(when (require 'guix-emacs nil t)\n" - " (guix-emacs-autoload-packages))\n")))) + (string-append + "(when (require 'guix-emacs nil t)\n" + " (guix-emacs-autoload-packages)\n" + " (advice-add 'package-load-all-descriptors" + " :after #'guix-emacs-load-package-descriptors))")))) ;; Remove the extraneous subdirs.el file, as it causes Emacs to ;; add recursively all the the sub-directories of a profile's ;; share/emacs/site-lisp union when added to EMACSLOADPATH, @@ -259,6 +281,8 @@ ("acl" ,acl) ("jansson" ,jansson) ("gmp" ,gmp) + ("ghostscript" ,ghostscript) + ("poppler" ,poppler) ;; When looking for libpng `configure' links with `-lpng -lz', so we ;; must also provide zlib as an input. diff --git a/gnu/packages/emulators.scm b/gnu/packages/emulators.scm index cbf662f514..0ed8596a7e 100644 --- a/gnu/packages/emulators.scm +++ b/gnu/packages/emulators.scm @@ -1753,7 +1753,7 @@ This is a part of the TiLP project.") (define-public mame (package (name "mame") - (version "0.237") + (version "0.238") (source (origin (method git-fetch) @@ -1762,7 +1762,7 @@ This is a part of the TiLP project.") (commit (apply string-append "mame" (string-split version #\.))))) (file-name (git-file-name name version)) (sha256 - (base32 "0syj7l262s2ac70dfg47pakd6fk8x3p3sasixmcwdmvnzkiqvmj4")) + (base32 "188h9a4lla0gimbss1bfvlidsm0l8smhqrhplv973k8j2jgf74fb")) (modules '((guix build utils))) (snippet ;; Remove bundled libraries. @@ -1902,7 +1902,7 @@ This is a part of the TiLP project.") ("texinfo" ,texinfo))) (inputs `(("alsa-lib" ,alsa-lib) - ("asio" ,asio-1.12) ;the bundled copy is at 1.11 + ("asio" ,asio) ("expat" ,expat) ("flac" ,flac) ("fontconfig" ,fontconfig) diff --git a/gnu/packages/engineering.scm b/gnu/packages/engineering.scm index aed8146001..ee7c73893d 100644 --- a/gnu/packages/engineering.scm +++ b/gnu/packages/engineering.scm @@ -25,6 +25,7 @@ ;;; Copyright © 2021 Gerd Heber <gerd.heber@gmail.com> ;;; Copyright © 2021 Guillaume Le Vaillant <glv@posteo.net> ;;; Copyright © 2021 Ivan Gankevich <i.gankevich@spbu.ru> +;;; Copyright © 2021 Petr Hodina <phodina@protonmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -129,6 +130,7 @@ #:use-module (gnu packages xml) #:use-module (gnu packages xiph) #:use-module (gnu packages openkinect) + #:use-module (gnu packages xdisorg) #:use-module (gnu packages xorg)) (define-public librecad @@ -1170,6 +1172,44 @@ educational use. As such, there is an emphasis on capabilities that improve the 'showing the effect of'-style of operation.") (license license:gpl2+))) +(define-public valeronoi +(package + (name "valeronoi") + (version "0.1.4") + (source + (origin + (method git-fetch) + (uri + (git-reference + (url "https://github.com/ccoors/Valeronoi") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1zp653bjqsyixa5j1pp9k12iqsl8dz72yyi38asxmcym1wngsjcd")))) + (build-system cmake-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "./valeronoi-tests"))))))) + (inputs + `(("boost" ,boost) + ("cgal" ,cgal) + ("gmp" ,gmp) + ("libxkbcommon" ,libxkbcommon) + ("mpfr" ,mpfr) + ("openssl" ,openssl) + ("qtbase" ,qtbase-5) + ("qtsvg" ,qtsvg))) + (home-page "https://github.com/ccoors/Valeronoi") + (synopsis "WiFi mapping companion application for Valetudo") + (description + "Valeronoi (Valetudo + Voronoi) is a companion for Valetudo for generating +WiFi signal strength maps. It visualizes them using a Voronoi diagram.") + (license license:gpl3+))) + (define-public volk (package (name "volk") diff --git a/gnu/packages/file-systems.scm b/gnu/packages/file-systems.scm index e6716e55bc..306144c37a 100644 --- a/gnu/packages/file-systems.scm +++ b/gnu/packages/file-systems.scm @@ -251,14 +251,14 @@ unmaintained---to use the @code{inotify} API instead of the deprecated (define-public davfs2 (package (name "davfs2") - (version "1.6.0") + (version "1.6.1") (source (origin (method url-fetch) (uri (string-append "https://download.savannah.nongnu.org/releases/" "davfs2/davfs2-" version ".tar.gz")) (sha256 - (base32 "0l1vnv5lfigciwg17p10zxwhzj4qw2d9kw30prr7g4dxhmb6fsrf")))) + (base32 "1h65j2py59b97wbzzjhp4wbkk6351v3hrjscjcfab0p5xi4bjgnf")))) (build-system gnu-build-system) (arguments `(#:configure-flags @@ -277,16 +277,14 @@ unmaintained---to use the @code{inotify} API instead of the deprecated (substitute* "etc/Makefile.in" (("(dist_pkgdata_DATA =.*) davfs2.conf secrets(.*)" _ prefix suffix) - (string-append prefix suffix))) - #t)) + (string-append prefix suffix))))) (add-after 'unpack 'patch-file-names (lambda _ ;; Don't auto-load the FUSE kernel module. That's up to root. ;; XXX If/when we restore the previous behaviour, make sure not ;; to introduce a security hole when mount.davfs is setuid. (substitute* "src/kernel_interface.c" - (("/sbin/modprobe") "/modprobe/disabled")) - #t)) + (("/sbin/modprobe") "/modprobe/disabled")))) (replace 'install (lambda* (#:key make-flags outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out"))) @@ -561,7 +559,7 @@ from the bcachefs-tools package. It is meant to be used in initrds.") (define-public exfatprogs (package (name "exfatprogs") - (version "1.1.2") + (version "1.1.3") (source (origin (method git-fetch) @@ -570,7 +568,7 @@ from the bcachefs-tools package. It is meant to be used in initrds.") (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "19pbybgbfnvjb3n944ihrn1r8ch4dm8dr0d44d6w7p63dcp372xy")))) + (base32 "14lgwvbg6jibsdpzpcj484p9q4ixawyjxi9hw23w89c6870gglw9")))) (build-system gnu-build-system) (arguments `(#:configure-flags diff --git a/gnu/packages/finance.scm b/gnu/packages/finance.scm index 0bb9c79520..7177f20834 100644 --- a/gnu/packages/finance.scm +++ b/gnu/packages/finance.scm @@ -859,9 +859,11 @@ the Monero GUI client.") (license license:bsd-3))) (define-public python-trezor-agent + ;; It is called 'libagent' in pypi; i.e. this is the library as opposed to + ;; the toplevel app called trezor-agent. (package (name "python-trezor-agent") - (version "0.13.1") + (version "0.14.4") (source (origin (method git-fetch) @@ -870,7 +872,7 @@ the Monero GUI client.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "0q99vbfd3h85s8rnjipnmldixabqmmlk5w9karv6f0rhyi54f4zv")))) + (base32 "1ksv494xpga27ifrjyn1bkqaya5h769lqb9rx1ng0n4kvmnrqr3l")))) (build-system python-build-system) (arguments `(#:phases @@ -893,9 +895,10 @@ the Monero GUI client.") ("python-daemon" ,python-daemon) ("python-docutils" ,python-docutils) ("python-ecdsa" ,python-ecdsa) - ("python-ed25519" ,python-ed25519) + ("python-hidapi" ,python-hidapi) ("python-mnemonic" ,python-mnemonic) ("python-pymsgbox" ,python-pymsgbox) + ("python-pynacl" ,python-pynacl) ("python-semver" ,python-semver) ("python-unidecode" ,python-unidecode) ("python-wheel" ,python-wheel))) @@ -940,13 +943,13 @@ settings.") (define-public python-mnemonic (package (name "python-mnemonic") - (version "0.19") + (version "0.20") (source (origin (method url-fetch) (uri (pypi-uri "mnemonic" version)) (sha256 - (base32 "0cd9prmdj8wzdmc7lxbf9lz0xrlkvak5ignag406mmfbn81fndsf")))) + (base32 "1xi5qvj2rvi5almf9c89rl7hz1z4ms04d53pg818i4vpkmivavvw")))) (build-system python-build-system) (propagated-inputs `(("python-pbkdf2" ,python-pbkdf2))) @@ -1014,16 +1017,38 @@ Nano dongle.") (define-public python-trezor (package (name "python-trezor") - (version "0.12.1") + (version "0.12.4") (source - (origin - (method url-fetch) - (uri (pypi-uri "trezor" version)) - (sha256 - (base32 "1w19m9lws55k9sjhras47hpfpqwq1jm5vy135nj65yhkblygqg19")))) + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/trezor/trezor-firmware/") + (commit (string-append "python/v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1k0zk94jnkhr4iyngjfhfvff5mibx265q81v8jhvhd3m4clzgc45")) + (modules + '((guix build utils) + (srfi srfi-26) + (srfi srfi-1) + (ice-9 ftw))) + (snippet + '(begin + ;; Delete everything except ./python/ + (for-each delete-file-recursively + (scandir "./" (negate (cut member <> '("python" "." "..") + string=)))) + ;; Move ./python/* to the toplevel. + (for-each (lambda (file-name) + (rename-file (string-append "./python/" file-name) + (string-append "./" file-name))) + (scandir "./python/" + (negate (cut member <> '("." "..") string=)))) + (delete-file-recursively "./python"))))) (build-system python-build-system) (propagated-inputs - `(("python-click" ,python-click) + `(("python-attrs" ,python-attrs) + ("python-click" ,python-click) ("python-construct" ,python-construct) ("python-ecdsa" ,python-ecdsa) ("python-libusb1" ,python-libusb1) @@ -1102,31 +1127,63 @@ the KeepKey Hardware Wallet.") (define-public trezor-agent (package (name "trezor-agent") - (version "0.10.0") + (version "0.11.0-1") (source (origin - (method url-fetch) - (uri (pypi-uri "trezor_agent" version)) + (method git-fetch) + (uri (git-reference + (url "https://github.com/romanz/trezor-agent") + ;; The version mismatch is not a mistake. Multiple Python + ;; apps/packages are in the same git repo, and they have + ;; different versions. The git tag seems to track libagent, + ;; i.e. python-trezor-agent in the Guix namespace. See + ;; e.g. ./agents/trezor/setup.py. + (commit "v0.14.4"))) + (file-name (git-file-name name version)) (sha256 - (base32 - "144657c7bn0a667dq5fv5r6j7iilxf3h9agj29v1m2qpq40g0az8")))) + (base32 "0nl44ldfw9s2v3p7g5bldfw3ds2hz9r28j42bpnp8bj0v5na3ivk")) + (modules + '((guix build utils) + (ice-9 ftw) + (srfi srfi-1) + (srfi srfi-26))) + (snippet + '(begin + ;; Delete everything except ./agents/trezor/ + (for-each delete-file-recursively + (filter (lambda (full-name) + (not (string-prefix? "./agents/trezor/" full-name))) + (find-files "."))) + ;; Move ./agents/trezor/* to the toplevel + (for-each (lambda (file-name) + (rename-file (string-append "./agents/trezor/" file-name) + (string-append "./" file-name))) + (scandir "./agents/trezor/" + (negate (cut member <> '("." "..") string=)))) + (delete-file-recursively "./agents"))))) (arguments - ;; Tests fail with "AttributeError: module 'attr' has no attribute 's'". `(#:phases (modify-phases %standard-phases (add-after 'wrap 'fixup-agent-py (lambda* (#:key inputs outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out"))) - ;; overwrite the wrapper with the real thing. + ;; The wrap phase also wraps trezor_agent.py (besides the + ;; public facing executable called trezor-agent). We need to + ;; undo that wrapping. The reason this is needed is that the + ;; python easy install generates a toplevel script (?) that + ;; messes with argv[0] and then re-opens the python + ;; module. This fails when the wrapped file is actually a shell + ;; script, not a python file. + (delete-file (string-append out "/bin/.trezor_agent.py-real")) + ;; Overwrite the wrapped one with the real thing. (install-file "./trezor_agent.py" - (string-append out "/bin")) - #t)))))) + (string-append out "/bin")))))))) (build-system python-build-system) (inputs `(("python-trezor" ,python-trezor) ("python-trezor-agent" ,python-trezor-agent))) (native-inputs - `(("python-hidapi" ,python-hidapi))) + `(("python-attrs" ,python-attrs))) (home-page "https://github.com/romanz/trezor-agent") (synopsis "Using Trezor as hardware SSH/GPG agent") (description "This package allows using Trezor as a hardware SSH/GPG @@ -1329,7 +1386,7 @@ trezord as a regular user instead of needing to it run as root.") (define-public trezord (package (name "trezord") - (version "2.0.30") + (version "2.0.31") (source (origin (method git-fetch) @@ -1337,8 +1394,7 @@ trezord as a regular user instead of needing to it run as root.") (url "https://github.com/trezor/trezord-go") (commit (string-append "v" version)))) (sha256 - (base32 - "1hzvk0wfgg7b4wpqjk3738yqxlv3pj5i7zxwm0jady2h97hmrqrr")) + (base32 "130nhk1pnr3xx9qkcij81mm3jxrl5zvvdqhvrgvrikqg3zlb6v5b")) (file-name (git-file-name name version)))) (build-system go-build-system) (arguments diff --git a/gnu/packages/game-development.scm b/gnu/packages/game-development.scm index d148a6a8ff..30a1b3d6a1 100644 --- a/gnu/packages/game-development.scm +++ b/gnu/packages/game-development.scm @@ -24,6 +24,7 @@ ;;; Copyright © 2021 Dmitry Polyakov <polyakov@liltechdude.xyz> ;;; Copyright © 2020-2021 James Smith <jsubuntuxp@disroot.org> ;;; Copyright © 2021 Ekaitz Zarraga <ekaitz@elenq.tech> +;;; Copyright © 2021 Andy Tai <atai@atai.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -112,7 +113,7 @@ (define-public bullet (package (name "bullet") - (version "2.89") + (version "3.17") (source (origin (method git-fetch) (uri (git-reference @@ -121,7 +122,7 @@ (file-name (git-file-name name version)) (sha256 (base32 - "10ncf2z474jnv7p5lv01ak2mk2hib3rj5rz1zr8v2v5pnciqbijl")) + "0x1ghxbkvqr910sp01sjf4hlfy4sdgn2jx2qf0dsi697bzq1f3mr")) (modules '((guix build utils))) (snippet '(begin @@ -131,9 +132,7 @@ '("Gwen" "clsocket" "enet" "glad" "imgui" "lua-5.2.3" "midi" "minizip" "openvr" "optionalX11" "serial" "zlib"))) - ;; These need files from ThirdPartyLibs. - (substitute* "Extras/CMakeLists.txt" - (("BulletRobotics") "")) + ;; Tests fail on linking, cannot find -lBussIK. (substitute* "test/CMakeLists.txt" ((" InverseDynamics") @@ -146,6 +145,12 @@ "-DBUILD_CPU_DEMOS=OFF" "-DBUILD_OPENGL3_DEMOS=OFF" "-DBUILD_BULLET2_DEMOS=OFF" + ;; Extras/BulletRoboticsGUI needs files from + ;; ThirdPartyLibs + "-DBUILD_BULLET_ROBOTICS_GUI_EXTRA=OFF" + ;; Extras/BulletRobotics needs files from + ;; ThirdPartyLibs + "-DBUILD_BULLET_ROBOTICS_EXTRA=OFF" (string-append "-DCMAKE_CXX_FLAGS=-fPIC " (or (getenv "CXXFLAGS") ""))) #:phases diff --git a/gnu/packages/games.scm b/gnu/packages/games.scm index cdd3452fd8..9410eaf111 100644 --- a/gnu/packages/games.scm +++ b/gnu/packages/games.scm @@ -885,7 +885,7 @@ high a score as possible.") (define-public cataclysm-dda (package (name "cataclysm-dda") - (version "0.F-2") + (version "0.F-3") (source (origin (method git-fetch) @@ -893,7 +893,7 @@ high a score as possible.") (url "https://github.com/CleverRaven/Cataclysm-DDA") (commit version))) (sha256 - (base32 "1wzsri6rh2fm7078hw0y4x7lqjs6ak4a66d05szfiinnxyn4w1ph")) + (base32 "1qnsz6az9qp4sbr3y4rcqhlmadrrdzafvd2xwf3db5wn0swvbjys")) (file-name (git-file-name name version)))) (build-system gnu-build-system) (arguments @@ -4145,7 +4145,7 @@ falling, themeable graphics and sounds, and replays.") (define-public wesnoth (package (name "wesnoth") - (version "1.16.0") + (version "1.16.1") (source (origin (method url-fetch) (uri (string-append "mirror://sourceforge/wesnoth/wesnoth-" @@ -4154,7 +4154,7 @@ falling, themeable graphics and sounds, and replays.") "wesnoth-" version ".tar.bz2")) (sha256 (base32 - "0qs102ws46z0cqyk3maxd1c4bywswlacbqkpmb51x9jd8c746vhz")))) + "0cyrwmdg93pqpdm7030540jznaky9rda355i9ym8am4k9civlcwf")))) (build-system cmake-build-system) (arguments `(#:tests? #f)) ;no check target @@ -6405,14 +6405,14 @@ with the mouse isn’t always trivial.") (define-public chroma (package (name "chroma") - (version "1.19") + (version "1.20") (source (origin (method url-fetch) (uri (string-append "http://level7.org.uk/chroma/download/chroma-" version ".tar.bz2")) (sha256 (base32 - "19ybvv0dkql913xpgjgxyyy50s72vajc7hm83zsvy2lsq8lhg76q")))) + "02hn448ckfxbx2fqr9wgf66rwl0vr4gl87yvsr5fc99zz9zw2f5v")))) (build-system gnu-build-system) (arguments `(#:tests? #f)) ; no tests included diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm index f2b663a477..2238cfa4de 100644 --- a/gnu/packages/gnome.scm +++ b/gnu/packages/gnome.scm @@ -11976,8 +11976,7 @@ these services on the Guix System.") (add-before 'check 'setup-xvfb (lambda _ (system "Xvfb :1 &") - (setenv "DISPLAY" ":1") - #t))))) + (setenv "DISPLAY" ":1")))))) (inputs `(("enchant" ,enchant) ("folks" ,folks) @@ -12011,6 +12010,7 @@ these services on the Guix System.") ("glib:bin" ,glib "bin") ("gmime" ,gmime) ("gobject-introspection" ,gobject-introspection) + ("gsettings-desktop-schemas" ,gsettings-desktop-schemas) ("itstool" ,itstool) ("libarchive" ,libarchive) ("libxml2" ,libxml2) diff --git a/gnu/packages/gnuzilla.scm b/gnu/packages/gnuzilla.scm index 579103bd5e..32411d0d1b 100644 --- a/gnu/packages/gnuzilla.scm +++ b/gnu/packages/gnuzilla.scm @@ -13,7 +13,7 @@ ;;; Copyright © 2020 Oleg Pykhalov <go.wigust@gmail.com> ;;; Copyright © 2020 Jakub Kądziołka <kuba@kadziolka.net> ;;; Copyright © 2019, 2020 Adrian Malacoda <malacoda@monarch-pass.net> -;;; Copyright © 2020 Jonathan Brielmaier <jonathan.brielmaier@web.de> +;;; Copyright © 2020, 2021 Jonathan Brielmaier <jonathan.brielmaier@web.de> ;;; Copyright © 2020 Marius Bakke <marius@gnu.org> ;;; Copyright © 2021 Brice Waegeneire <brice@waegenei.re> ;;; Copyright © 2021 Maxime Devos <maximedevos@telenet.be> @@ -765,6 +765,7 @@ in C/C++.") (origin (method computed-origin-method) (file-name (string-append "icecat-" %icecat-version ".tar.xz")) + (patches (search-patches "icecat-CVE-2021-43527.patch")) (sha256 #f) (uri (delay @@ -1334,290 +1335,13 @@ standards of the IceCat project.") (cpe-name . "firefox_esr") (cpe-version . ,(first (string-split version #\-))))))) -(define mozilla-78-compare-locales - (origin - (method hg-fetch) - (uri (hg-reference - (url "https://hg.mozilla.org/l10n/compare-locales/") - (changeset "RELEASE_8_0_0"))) - (file-name "mozilla-compare-locales") - (sha256 (base32 "0052wq92sg4i776x407b5838jx9h3phl9xy69m2q34f31n3gdyk2")))) - -(define all-mozilla-78-locales - (mozilla-locales - ;; sha256 changeset locale - ;;--------------------------------------------------------------------------- - ("1q1p7nl97478hkf1msbbcdh98k6fn87xwqihbw8np00ll5gk9k4v" "97cf3c155484" "ach") - ("0sajpblp639l448xywx7xlybjr5dm0rfrzx511a8pa9wn7dma4mf" "46929b4dda4e" "af") - ("04s756aaf1yyli1dn1vfdjymgyjs1pz2n7jvz76j27x4nzdgss7l" "96ffd2b04ba3" "an") - ("16nw7slm7irsnjf81r6zl273kbzri8sdbimzgzxwm0vh6xr61rgs" "1c4231166ddf" "ar") - ("0i0qrj4j8zjv55cisbmr21dp8mz933hc9wkpn3abz5k5pn84gpry" "bc4384b8be78" "ast") - ("1r77mmwg9x1jfa7g5lqa31rgyfrnix1zj80ibn5rq9gyhhsdrwbd" "dd56aead51fa" "az") - ("1kzjpy5bnvps8di72ksynhbhc9bpw1ml6hvphm74z8dz55ai4c18" "9d2bff64ddfb" "be") - ("1fygvjgph3siknfm7l0fh9y4ava72z1rxkip1zgmcdgq7jz8wzpf" "3808f4fe4db6" "bg") - ("1x9nlqia441xh04rhkmkw6qrgpwnyqw0grrf5n2qw96939wnmgl7" "5ca8752ed8df" "bn") - ("18yyxqzab44bgqx7h052d5nxyhv0l5bidgr16z1b3ak2crsfyx9q" "4c5d30ca9bf2" "br") - ("11bschjz7pgsm4r1qan5l4s3nkzm5jb0kivpp186wd1xsjci5bjb" "cf2478a7eae1" "bs") - ("12bak64nl6qi092l55xv330vh38mfsicrrf4wi693nn7zqb3mbpw" "4aa2cc349211" "ca") - ("0p97d7pnxqs971rr5c57i6cw3mx1mp3iasa0xdmdk0zpz9pjd3s4" "806914072144" "ca-valencia") - ("1rligf98h9r16mw3r3n5jalzi74xn2dnh6hkiixp7s2bvhjicwa4" "db2163383129" "cak") - ("18y5j8ljh72mj2nbx0m64mi3fyjbwyx992i004sv3zvs4d4z18w4" "d1d09eedddde" "cs") - ("12i4m9q6f8sl8arm8ja4gs4sl9m59p3kddlqi68srpz9mk66rqxz" "1caf58c64227" "cy") - ("16wacsd23zd4j0yi6vbj033wylia8hlpswx949x5hy1h9817j4vn" "9ef3b56aa243" "da") - ("1ddxnqpfi1wnciwmzkvvjinb51h22bg70r0dn7db17q64p4271rk" "a050b0eaec0a" "de") - ("0gw5h52rw3bc2lwffnv845sjwwj22gmabchmpa1rw2y6087dc7zk" "613135cb0759" "dsb") - ("0v17da37w1kbs73i6xql4c9xng6rfachyylpy3w8hpibpvi7i30n" "903db7c76b31" "el") - ("0ky1nj4kp070nriw0igsa64l39plcv2365zl8lqpbydyp6clwc3m" "6bb74673e9aa" "en-CA") - ("15jck6si2l4h5lrs8zjx56y97p70njpi26nnq6xfmvj1dk5qb4g2" "c06bd83a9295" "en-GB") - ("1gc400n8j8qk70vdw7fkf4m9yviia35cmj6361pxnyvsjrgm4qvm" "ae0fda5114c4" "eo") - ("0y01lahdrd3krsh6nrr3iw36r2x4advh5qw54vf92w11l3aiyvfz" "0c294dc9ce40" "es-AR") - ("16jjbsfa62dxk36ccziv7nmh26c1s0b05960in6zs5nnfrv4yh35" "7c30b2981fb4" "es-CL") - ("0qh8c8f8dsv1v56n1mcpn84l39bpnqfl8v8iacq12zh322srr549" "ad1444f4f833" "es-ES") - ("1vh3hm5r4ch6mk3ymbk12b9rppwc75fmbi0i7cml82kxsi77bzw5" "0a26cdb23536" "es-MX") - ("159l92jxx48lgba1g8ig3mdzhwsf3jpg3nx1g9blq4majk5hqr6q" "65a38a830795" "et") - ("1ha8y1wbgb66dqm26x1q2xwygy7bblkjz40y9vh5d2qlpr3fn0av" "21e0930b221d" "eu") - ("0rq4pcw6klm0bbljm1wdfvna8bpa35cm47hh2s63i2xdax4scahf" "5a4bb020cf09" "fa") - ("1py2594gsvpgrxnplz278ffb7grsf384kzjskrl1zyps0jw8fb1x" "4a4f712cd4aa" "ff") - ("1dyd55ngsglp1w2gh0yaacwb0vsq23gdvnj76f2x6g39h1li9s0z" "9c51cd915e2b" "fi") - ("0kimwivpq6pr63jh1k9fszsv8bi8vns3scg76mmnvbhh2ca8q7wj" "4f9e24a696ee" "fr") - ("1sbbnnp12lgy5qan2kix02942830b1969bd7jxrv7piwqfch9i06" "9e21a0eeb5b1" "fy-NL") - ("0dsvvyfrzkx5h44gqgdci7arb8h4lq48w20cnr8fc7j17grvnkzz" "999a995bc09d" "ga-IE") - ("1487msbsgrfzmyijhf6a4wbqdjpd7b7ki9nwrjjjjlnbw0h0ljpb" "6a9ddcab3240" "gd") - ("1kzc4fwr18kgisdzba2acj1ag8mxbifqpk5p30jv68nmvqfsvl8d" "51eb5e352db9" "gl") - ("13gy3wn44kcxr7j3sbl69fp415875f4vb0gm91hx0fysqlvryhcs" "b9de1ffe3224" "gn") - ("0w5nvzpjn5vr35c1852rlff581vpy71nc096cz125852kyqkzkc3" "5b3307475ada" "gu-IN") - ("1ycakc4qpy9vcy50j3ricryjfnjr9v3a5ijj6bbfl4y6aks157fy" "c742df968ffd" "he") - ("1b2jf83c500wm5wcdnijq0b7y4m8n6271smq8pygahn5nq17f0gq" "1a3039a52b8a" "hi-IN") - ("19bbw8ix5m83cf4yarcmjl7jqa8xfabwqnh3nj6vi52rwvn7whk5" "8dc50e269ef3" "hr") - ("12rrsvgg6bb2h8fhni7jbx8pv983q8ym5fhfjim957n9q2yp5db6" "67e40f48dec7" "hsb") - ("0apyh713p3hrlj8041xwblcssahbmsqp9v9hbmb50ayf4z850kr1" "40073a597b1b" "hu") - ("0q0r076lq250d3vmnz9d92wj137c2v8i362c2avmkgp5zr3mcl0z" "2ea33335afdb" "hy-AM") - ("0qza33gdc1i9259dwd2f7vd78s0a6rg34aqdkhcn7f2l6ybw6xd6" "930041db15eb" "ia") - ("1211h0gp7gianh3qf76w04gfzk4n2bnyc9i8dviyz0vh4cjbx11m" "08811a49b41c" "id") - ("12lcr841g1j7453s7gb51vrvxmshx4ha3h1jx4vh8wr891xv8l6a" "2f7a8d31e0ba" "is") - ("1x585g0r2kcv0d3phnxx85bk5g0pi1yl0hwp4idv19yc9hslr04s" "188357cc04b4" "it") - ("09v35g9v7j6x0p1hggydm3a1rmq2fh4z7g1l88z3w5k6wq2nhj1b" "45cee0ba4771" "ja") - ("0prs3vycfvvaffjigdgyxiq41ak2rc34lnan5a6cwdqjgy7z450s" "d60a19d9bf17" "ja-JP-mac") - ("1nskzm8rgczrbgcxlzzq5zqdfd456ad0cylq27nf0wjiyq6kjzcm" "00cb00e78672" "ka") - ("0g6zznmhiam172nm7g2qzfpk415mna8kiihm73z2sdns64xb3ymg" "77a293a4bced" "kab") - ("17dld9lrym7rpvpvnkssivp4wx1f11zpk86wczbq1h52qgd70p55" "2c9b33a56d5d" "kk") - ("1nlzl8930c8ql3yq425wyqlxvq8arrjv20xpm5g7yfxd54av89ac" "9cddd42af05c" "km") - ("07hkrcdksvrqk816yimd036dlw15nc4sjk4gmw16ywbp093v0mqq" "e0c2969a8398" "kn") - ("08aqggvk3qbv5bzks9i1iba9akhkpm01d2c9k0zf41mpr2r5yfg2" "827567d0dafc" "ko") - ("0vagaiwy80bs1k3gkacshlzb5zchkcshx0ypwirvayc63sw4yl8l" "694b2a24e868" "lij") - ("1r43kp1kzahrbza0hiyavqplk9h08pzsb6rpjy79jr6l1iqb89sy" "d6728db7e060" "lt") - ("0sq2wbsj79xl7fi454k6q5xdhxyck1whjz315rv37vphqpx86b9b" "61e9b33f4d94" "lv") - ("0q8jxg1af22hs9wjdf0jd3bqk4rafxyzvsjl35k75am7l2y1fl3c" "9e482f6dd72c" "mk") - ("1zsfzjrzbc58d30a9yz12h5vphywgpw8xg6y6zn3677a785dvr20" "1fd2763336a4" "mr") - ("1rzygkkpn1a59daygd3hdaqph2np6sqvpgh68j0xr4il958ymnsm" "67ddab62dab4" "ms") - ("16jp6w5gizfxs7jvncg3ly13m59vqvh4rlmjd0q23m5g5ff9sklc" "3ed015b51bf3" "my") - ("1wfv023j67lb4iyf49fsknwm4z3xy0xqcf25b2nzanggxj26n01x" "d01801233a8f" "nb-NO") - ("1946vfia58vbjfippb5pfsskbjj95w7hb340smn6ry2vmza99mxp" "582defb08fb2" "ne-NP") - ("12w5ywh4c3s55y3zqc48cp1gcpwwjg444yfh1bghhhb9ni1xkh5i" "05f6359a29a6" "nl") - ("17jb076320cgkw1ypwmws2vjxsqlv2ww8aaisa3j334vbrw1m4zx" "50b41a1ddded" "nn-NO") - ("1y840j0v5zdgj94cbacy6j1snf44rynmzxq3yk8i26arcar62akl" "a6a138531a44" "oc") - ("0jq1hq4xhqxpa26r8pb1bgbaljgfkhn9l6p5pbnslkllpbh70q6l" "e70a3afaef25" "pa-IN") - ("1hih138skwy2gb8q10ngg6zalrk3aa3d549mg79gqzxbi5zy19fw" "e035f33389eb" "pl") - ("1hhif4hx4k351wm1bzykzycfzb5q8msxmiwh5r1cy32rh8wkxwhh" "54098495f37f" "pt-BR") - ("0gkjs12rxjml1m3mljskpz1gr6aph0c31nwpwdqybfg54w9qslib" "3fdf021f624e" "pt-PT") - ("0anyvwd9v6mr8y3ww33s6qnxkawqn5lz65vrxx3m3kzky63ai1xk" "794f9374eb87" "rm") - ("1p4drj25gsfv7lwgm5saazh38iqrh53952n8i4bmxpn0nadbm2n5" "71ce18bcf6cc" "ro") - ("17yssf4axd3zvncl4ka4wkfnwcn0z0arp3390vb9cps67na29p36" "3a9587227699" "ru") - ("0xk6rksspcw1222v4rgk5a6gzrpx64k29hm7p9qkqwd70s34yj46" "c020582a72ce" "si") - ("1ax5ibydyn7sj208r66zcxlcr8dxdqrw28vqyjif4jx583rp4lfp" "745a699b7f51" "sk") - ("13rin7hm1dv8g0hbcv8mp2hiwpk1k5bhzvkqpqajkkik4lx523mc" "8e437e2351ef" "sl") - ("0yh5jkl5zw3f7x1w2w6zfj3dyvcl4wj1zv4di7qsq2nl2yyizf7x" "2d99e2eff94f" "son") - ("0vzq7s27jsdbw5k59wfykysg1kd8w229ab5d4zjdf30l59igkahh" "69bbdf07bd80" "sq") - ("1mwivvs8vrk6vjq6i33kwlrlisra7dy35521ayps9p2rz2dll4rr" "215df5c5125c" "sr") - ("0g97yz1rg5cfflj8vvq3sqliyvm06x818z9yldfh5rjg1y6n9fjd" "8be00a1a50d4" "sv-SE") - ("0ii02jn3lh2i6d0s95whx9aj6w3x8axc7w1rlzj0lc2s9n52krz3" "170a84339dbe" "ta") - ("1ss7symad2crapxjqc0xhc0n17l79r5vf7flvkgk7npjky4vb7nv" "72a79a304f7f" "te") - ("11iqmg8zamgscnvs4n2xpw3g9azn6w38qs313wiwm86pyx6694ss" "8e91ce3064c5" "th") - ("1zgkvn9flb8by62ip9r3gmpgxwgkww1zhml5mwa0djq3ppfdgi1c" "0f914d0cda56" "tl") - ("1filkhdak6dbrd83q602x1qw1703nlm53nm9gcyab8s16gsx6ylz" "62ca6a8eaeba" "tr") - ("0cgagdy0ixprk3knczdmkqxkmx4ybmshhh0956kxbd0iab0dfcf6" "f110ccac4cde" "trs") - ("1f1ghk67zwnwc5x3nk82vcv94nf8glngkfya1hg074q3088sj9pa" "56c0102d5f1c" "uk") - ("0iyw1b2jjylkdwxv9sxvj4ikxl64sx612b2dvvmf1di8bw86w74r" "7d53bce5ae98" "ur") - ("1q83cp5pfgs8l03zirwi8r5qp8qyh4zvxdx1ilgaqqlyg42yql7c" "9b500e1a054d" "uz") - ("1d4nkybz2hk64ay04k965b9lc5nhhpmzcs5ww3b6q4n93rf9c2z7" "2a000025928a" "vi") - ("1cnrsfnyl3sw3sxsggmjwydvphb2diy0vzknvxdhpnvq3ln18hga" "74724087c25b" "xh") - ("1j6l66v1xw27z8w78mpsnmqgv8m277mf4r0hgqcrb4zx7xc2vqyy" "527e5e090608" "zh-CN") - ("1frwx35klpyz3sdwrkz7945ivb2dwaawhhyfnz4092h9hn7rc4ky" "6cd366ad2947" "zh-TW"))) - -(define %icecat-78-version "78.15.0-guix0-preview1") - -(define icecat-78-source - (let* ((base-version (first (string-split %icecat-78-version #\-))) - - (major-version (first (string-split base-version #\.))) - (minor-version (second (string-split base-version #\.))) - (sub-version (third (string-split base-version #\.))) - - (upstream-firefox-version (string-append base-version "esr")) - (upstream-firefox-source - (origin - (method url-fetch) - (uri (string-append - "https://ftp.mozilla.org/pub/firefox/releases/" - upstream-firefox-version "/source/" - "firefox-" upstream-firefox-version ".source.tar.xz")) - (sha256 - (base32 - "0l91cxdc5v9fps79ckb1kid4gw6v5qng1jd9zvaacwaiv628shx4")))) - - (upstream-icecat-base-version "78.7.0") ; maybe older than base-version - ;;(gnuzilla-commit (string-append "v" upstream-icecat-base-version)) - (gnuzilla-commit "abfe5eebaca3c2787f1a9505669393674493c177") - (gnuzilla-source - (origin - (method git-fetch) - (uri (git-reference - (url "git://git.savannah.gnu.org/gnuzilla.git") - (commit gnuzilla-commit))) - (file-name (git-file-name "gnuzilla" - ;;upstream-icecat-base-version - (string-take gnuzilla-commit 8))) - (sha256 - (base32 - "00ws3540x5whpicc5fx4k949ff73cqvajz6jp13ahn49wqdads47")))) - - ;; 'search-patch' returns either a valid file name or #f, so wrap it - ;; in 'assume-valid-file-name' to avoid 'local-file' warnings. - (gnuzilla-fixes-patch - (local-file (assume-valid-file-name - (search-patch "icecat-use-older-reveal-hidden-html.patch")))) - (makeicecat-patch - (local-file (assume-valid-file-name - (search-patch "icecat-78-makeicecat.patch"))))) - - (origin - (method computed-origin-method) - (file-name (string-append "icecat-" %icecat-78-version ".tar.xz")) - (sha256 #f) - (uri - (delay - (with-imported-modules '((guix build utils)) - #~(begin - (use-modules (guix build utils)) - (let ((firefox-dir - (string-append "firefox-" #$base-version)) - (icecat-dir - (string-append "icecat-" #$%icecat-78-version))) - - (mkdir "/tmp/bin") - (set-path-environment-variable - "PATH" '("bin") - (list "/tmp" - #+(canonical-package bash) - #+(canonical-package coreutils) - #+(canonical-package findutils) - #+(canonical-package patch) - #+(canonical-package xz) - #+(canonical-package sed) - #+(canonical-package grep) - #+(canonical-package bzip2) - #+(canonical-package gzip) - #+(canonical-package tar) - #+rename)) - - (symlink #+(file-append rename "/bin/rename") - "/tmp/bin/prename") - - ;; We copy the gnuzilla source directory because it is - ;; read-only in 'gnuzilla-source', and the makeicecat script - ;; uses "cp -a" to copy parts of it and assumes that the - ;; copies will be writable. - (copy-recursively #+gnuzilla-source "/tmp/gnuzilla" - #:log (%make-void-port "w")) - - (with-directory-excursion "/tmp/gnuzilla" - (make-file-writable "makeicecat") - (invoke "patch" "--force" "--no-backup-if-mismatch" - "-p1" "--input" #+gnuzilla-fixes-patch) - (invoke "patch" "--force" "--no-backup-if-mismatch" - "-p1" "--input" #+makeicecat-patch) - (patch-shebang "makeicecat") - (substitute* "makeicecat" - (("^FFMAJOR=(.*)" all ffmajor) - (unless (string=? #$major-version - (string-trim-both ffmajor)) - ;; The makeicecat script cannot be expected to work - ;; properly on a different version of Firefox, even if - ;; no errors occur during execution. - (error "makeicecat major version mismatch")) - (string-append "FFMAJOR=" #$major-version "\n")) - (("^FFMINOR=.*") - (string-append "FFMINOR=" #$minor-version "\n")) - (("^FFSUB=.*") - (string-append "FFSUB=" #$sub-version "\n")) - (("^DATA=.*") - "DATA=/tmp/gnuzilla/data\n") - (("/bin/sed") - #+(file-append (canonical-package sed) "/bin/sed")))) - - (format #t "Unpacking upstream firefox tarball...~%") - (force-output) - (invoke "tar" "xf" #+upstream-firefox-source) - (rename-file firefox-dir icecat-dir) - - (with-directory-excursion icecat-dir - (format #t "Populating l10n directory...~%") - (force-output) - (mkdir "l10n") - (with-directory-excursion "l10n" - (for-each - (lambda (locale-dir) - (let ((locale - (string-drop (basename locale-dir) - (+ 32 ; length of hash - (string-length "-mozilla-locale-"))))) - (format #t " ~a~%" locale) - (force-output) - (copy-recursively locale-dir locale - #:log (%make-void-port "w")) - (for-each make-file-writable (find-files locale)) - (with-directory-excursion locale - (when (file-exists? ".hgtags") - (delete-file ".hgtags")) - (mkdir-p "browser/chrome/browser/preferences") - (call-with-output-file - "browser/chrome/browser/preferences/advanced-scripts.dtd" - (lambda (port) #f))))) - '#+all-mozilla-78-locales) - (copy-recursively #+mozilla-78-compare-locales - "compare-locales" - #:log (%make-void-port "w")) - (delete-file "compare-locales/.gitignore") - (delete-file "compare-locales/.hgignore") - (delete-file "compare-locales/.hgtags")) - - (format #t "Running makeicecat script...~%") - (force-output) - (invoke "bash" "/tmp/gnuzilla/makeicecat")) - - (format #t "Packing IceCat source tarball...~%") - (force-output) - (invoke "tar" "cfa" #$output - ;; Avoid non-determinism in the archive. We set the - ;; mtime of files in the archive to early 1980 because - ;; the build process fails if the mtime of source - ;; files is pre-1980, due to the creation of zip - ;; archives. - "--mtime=@315619200" ; 1980-01-02 UTC - "--owner=root:0" - "--group=root:0" - "--sort=name" - icecat-dir) - - #t)))))))) - ;; Update this together with icecat! -(define %icedove-build-id "20211008000000") ;must be of the form YYYYMMDDhhmmss +(define %icedove-build-id "20211119000000") ;must be of the form YYYYMMDDhhmmss (define-public icedove (package (name "icedove") - (version "78.15.0") - (source icecat-78-source) + (version "91.3.2") + (source icecat-source) (properties `((cpe-name . "thunderbird_esr"))) (build-system gnu-build-system) @@ -1635,7 +1359,6 @@ standards of the IceCat project.") (mkdir "comm") (copy-recursively (assoc-ref inputs "thunderbird-sources") "comm") - (delete-file-recursively "obj-x86_64-pc-linux-gnu") (delete-file "sourcestamp.txt") #t)) (add-after 'patch-source-shebangs 'patch-cargo-checksums @@ -1657,14 +1380,12 @@ standards of the IceCat project.") (add-after 'patch-source-shebangs 'fix-profile-setting (lambda _ (substitute* "comm/mail/moz.configure" - (("'MOZ_DEDICATED_PROFILES', True") - "'MOZ_DEDICATED_PROFILES', False")) + (("MOZ_DEDICATED_PROFILES, True") + "MOZ_DEDICATED_PROFILES, False")) #t)) (add-after 'prepare-thunderbird-sources 'rename-to-icedove (lambda _ (substitute* "comm/mail/confvars.sh" - (("MOZ_APP_BASENAME=Thunderbird") - "MOZ_APP_BASENAME=Icedove\nMOZ_APP_DISPLAYNAME=Icedove") (("MOZ_APP_NAME=thunderbird") "MOZ_APP_NAME=icedove") (("MOZ_UPDATER=1") @@ -1708,7 +1429,8 @@ standards of the IceCat project.") "enterprisepolicies/schemas/moz.build") (("Thunderbird") "Icedove"))) (substitute* '("comm/mailnews/base/prefs/content/accountUtils.js" - "comm/common/src/customizeToolbar.js") + "comm/mail/base/content/customizeToolbar.js" + "comm/suite/components/customizeToolbar.js") (("AppConstants.MOZ_APP_NAME (.)= \"thunderbird" _ e) (format #f "AppConstants.MOZ_APP_NAME ~a= \"icedove" e))) @@ -1742,6 +1464,7 @@ standards of the IceCat project.") "<!-- Guix: not a runtime dependency -->" (string-drop hash 8)))) #t)) + (delete 'bootstrap) (replace 'configure (lambda* (#:key inputs outputs configure-flags #:allow-other-keys) (let* ((out (assoc-ref outputs "out")) @@ -1752,8 +1475,6 @@ standards of the IceCat project.") ,@configure-flags)) (mozconfig (string-append (getcwd) "/.mozconfig"))) (setenv "SHELL" bash) - (setenv "AUTOCONF" - (search-input-file %build-inputs "/bin/autoconf")) (setenv "CONFIG_SHELL" bash) (setenv "QA_CONFIGURE_OPTIONS" ".*") (setenv "MOZBUILD_STATE_PATH" @@ -1762,9 +1483,11 @@ standards of the IceCat project.") (string-append (getcwd) "/.mozconfig")) (setenv "CC" "gcc") (setenv "MOZ_NOSPAM" "1") + (setenv "MACH_USE_SYSTEM_PYTHON" "1") (setenv "PYTHON" (search-input-file inputs "/bin/python")) (setenv "MOZ_BUILD_DATE" ,%icedove-build-id) ; avoid timestamp + (setenv "MOZ_APP_NAME" "icedove") (setenv "LDFLAGS" (string-append "-Wl,-rpath=" (assoc-ref outputs "out") "/lib/icedove")) @@ -1784,7 +1507,6 @@ standards of the IceCat project.") "ac_add_options --disable-updater\n" "ac_add_options --disable-webrtc\n" "ac_add_options --enable-application=comm/mail\n" - "ac_add_options --enable-calendar\n" "ac_add_options --enable-default-toolkit=\"cairo-gtk3\"\n" "ac_add_options --enable-optimize\n" "ac_add_options --enable-pulseaudio\n" @@ -1801,7 +1523,7 @@ standards of the IceCat project.") "ac_add_options --with-system-jpeg\n" "ac_add_options --with-system-libevent\n" "ac_add_options --with-system-nspr\n" - "ac_add_options --with-system-nss\n" + ;"ac_add_options --with-system-nss\n" "ac_add_options --with-system-zlib\n" "ac_add_options --with-user-appdir=\\.icedove\n" "mk_add_options MOZ_MAKE_FLAGS=-j" @@ -1866,7 +1588,7 @@ standards of the IceCat project.") ("gtk+" ,gtk+) ("gtk+-2" ,gtk+-2) ("hunspell" ,hunspell) - ("icu4c" ,icu4c-67) + ("icu4c" ,icu4c) ("libcanberra" ,libcanberra) ("libevent" ,libevent) ("libffi" ,libffi) @@ -1881,8 +1603,9 @@ standards of the IceCat project.") ("libxt" ,libxt) ("mesa" ,mesa) ("mit-krb5" ,mit-krb5) - ("nspr" ,nspr) - ("nss" ,nss) + ("nspr" ,nspr-4.32) + ; FIXME: create nss >= 3.68 after core-updates merge + ;("nss" ,nss) ("pango" ,pango) ("pixman" ,pixman) ("pulseaudio" ,pulseaudio) @@ -1898,20 +1621,20 @@ standards of the IceCat project.") ;; in the Thunderbird release tarball. We don't use the release ;; tarball because it duplicates the Icecat sources and only adds the ;; "comm" directory, which is provided by this repository. - ,(let ((changeset "2aa18076f0c3bc49d0e216798b3640891e68fada")) + ,(let ((changeset "c35def313c0c2bd0341e3e058f862f02390269c4")) (origin (method hg-fetch) (uri (hg-reference - (url "https://hg.mozilla.org/releases/comm-esr78") + (url "https://hg.mozilla.org/releases/comm-esr91") (changeset changeset))) (file-name (string-append "thunderbird-" version "-checkout")) (sha256 (base32 - "0ww1rgm8hpmji9fjhinqrwf07j2jikdq8j2x87h5s3naw5898fr3"))))) - ("autoconf" ,autoconf-2.13) + "0rp4i353dskx065a6hskvfpf0l2qywqnivks9qc6a85h4yah4rvq"))))) ("cargo" ,rust "cargo") ("clang" ,clang) ("llvm" ,llvm) + ("m4" ,m4) ("nasm" ,nasm) ("node" ,node) ("perl" ,perl) @@ -1919,7 +1642,7 @@ standards of the IceCat project.") ("python" ,python) ("python2" ,python-2.7) ("rust" ,rust) - ("rust-cbindgen" ,rust-cbindgen-0.14) + ("rust-cbindgen" ,rust-cbindgen-0.19) ("which" ,which) ("yasm" ,yasm))) (home-page "https://www.thunderbird.net") diff --git a/gnu/packages/golang.scm b/gnu/packages/golang.scm index fac3186777..d97267b939 100644 --- a/gnu/packages/golang.scm +++ b/gnu/packages/golang.scm @@ -7956,36 +7956,42 @@ error messages.") inspired by the causal messaging system in the Pony programming language.") (license license:expat)))) -(define-public go-github-com-cheggaaa-pb +(define-public go-github-com-cheggaaa-pb-v3 (package - (name "go-github-com-cheggaaa-pb") - (version "3.0.4") + (name "go-github-com-cheggaaa-pb-v3") + (version "3.0.8") (source - (origin + (origin (method git-fetch) (uri (git-reference (url "https://github.com/cheggaaa/pb/") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 - "0xhsv9yf3fz918ay6w0d87jnb3hk9vxvi16jk172kqq26x7jixd0")))) + (base32 "0d701s2niy39r650d1phjw19h4l27b1yfc2ih6s31f56b3zzqspx")))) (build-system go-build-system) (arguments - '(#:import-path "github.com/cheggaaa/pb/")) + '(#:import-path "github.com/cheggaaa/pb/v3" + ;; XXX: it does have tests but I'm not sure how to run them. + ;; go-build-system is looking in the wrong directory. + #:tests? #f)) (propagated-inputs - `(("go-github-com-fatih-color" ,go-github-com-fatih-color) + `(("go-golang-org-x-sys" ,go-golang-org-x-sys) + ("go-github-com-rivo-uniseg" ,go-github-com-rivo-uniseg) + ("go-github-com-mattn-go-runewidth" ,go-github-com-mattn-go-runewidth) + ("go-github-com-mattn-go-isatty" ,go-github-com-mattn-go-isatty) ("go-github-com-mattn-go-colorable" ,go-github-com-mattn-go-colorable) - ("go-github.com-mattn-go-runewidth" ,go-github.com-mattn-go-runewidth) - ("go-golang-org-x-sys" ,go-golang-org-x-sys))) - (native-inputs - `(("go-github-com-mattn-go-isatty" ,go-github-com-mattn-go-isatty))) + ("go-github-com-fatih-color" ,go-github-com-fatih-color) + ("go-github-com-vividcortex-ewma" ,go-github-com-vividcortex-ewma))) (home-page "https://github.com/cheggaaa/pb/") (synopsis "Console progress bar for Go") (description "This package is a Go library that draws progress bars on the terminal.") (license license:bsd-3))) +(define-public go-github-com-cheggaaa-pb + (deprecated-package "go-github-com-cheggaaa-pb" go-github-com-cheggaaa-pb-v3)) + (define-public go-github-com-gologme-log ;; this is the same as v1.2.0, only the LICENSE file changed (let ((commit "720ba0b3ccf0a91bc6018c9967a2479f93f56a55")) @@ -8157,7 +8163,7 @@ JSON data to the machine.") ;; source: golang.zx2c4.com/wireguard (uri (git-reference (url "https://git.zx2c4.com/wireguard-go/") - (commit (string-append "v" version)))) + (commit version))) (file-name (git-file-name name version)) (sha256 (base32 @@ -8850,3 +8856,108 @@ JSON for post-processing (description "Provides a platform-independent way to get atime, mtime, ctime and btime for files.") (license license:expat))) + +(define-public go-github-com-vividcortex-ewma + (package + (name "go-github-com-vividcortex-ewma") + (version "1.2.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/VividCortex/ewma") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0whx516l9nm4n41spagb605ry7kfnz1qha96mcshnfjlahhnnylq")))) + (build-system go-build-system) + (arguments '(#:import-path "github.com/vividcortex/ewma")) + (home-page "https://github.com/VividCortex/ewma") + (synopsis "Exponentially Weighted Moving Average algorithms for Go") + (description + "This package implements algorithms for exponentially weighted moving +averages.") + (license license:expat))) + +(define-public go-github-com-rivo-uniseg + (package + (name "go-github-com-rivo-uniseg") + (version "0.2.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/rivo/uniseg") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0j7h22vfmjj562vr8gpsyrkrwp1pq9ayh5fylv24skxb467g9f0q")))) + (build-system go-build-system) + (arguments '(#:import-path "github.com/rivo/uniseg")) + (home-page "https://github.com/rivo/uniseg") + (synopsis "Unicode Text Segmentation for Go") + (description + "This package implements Unicode Text Segmentation according to +@url{https://unicode.org/reports/tr29/, Unicode Standard Annex #29}.") + (license license:expat))) + +(define-public go-github-com-mattn-go-runewidth + (package + (name "go-github-com-mattn-go-runewidth") + (version "0.0.13") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/mattn/go-runewidth") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1yir0f3wc5z5hnkwhvx5qb6nmpfb05zp2gvfjvna63s8kmla1rrn")))) + (build-system go-build-system) + (arguments '(#:import-path "github.com/mattn/go-runewidth")) + (propagated-inputs + `(("go-github-com-rivo-uniseg" ,go-github-com-rivo-uniseg))) + (home-page "https://github.com/mattn/go-runewidth") + (synopsis "Rune width implementation for Go") + (description + "This package provides functions to get the fixed width of a character or +string.") + (license license:expat))) + +(define-public go-github-com-arceliar-ironwood + (package + (name "go-github-com-arceliar-ironwood") + (version "0.0.0-20210912013146-c2bc55bb349c") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/Arceliar/ironwood") + (commit (go-version->git-ref version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1dfkqnkfxwlwcsk8g9r1pv84lfzgn8r1vam13zlmk81cgan2r6fx")))) + (build-system go-build-system) + (arguments + '(#:import-path "github.com/Arceliar/ironwood" + #:tests? #f + #:phases + (modify-phases %standard-phases + ;; Source-only package + (delete 'build)))) + (propagated-inputs + `(("go-golang-org-x-crypto" ,go-golang-org-x-crypto) + ("go-github-com-arceliar-phony" ,go-github-com-arceliar-phony))) + (home-page "https://github.com/Arceliar/ironwood") + (synopsis "Experimental network routing library") + (description + "Ironwood is a routing library with a @code{net.PacketConn}-compatible +interface using @code{ed25519.PublicKey}s as addresses. Basically, you use it +when you want to communicate with some other nodes in a network, but you can't +guarantee that you can directly connect to every node in that network. It was +written to test improvements to / replace the routing logic in +@url{https://github.com/yggdrasil-network/yggdrasil-go,Yggdrasil}, but it may +be useful for other network applications.") + (license license:mpl2.0))) diff --git a/gnu/packages/guile-xyz.scm b/gnu/packages/guile-xyz.scm index a3b1182101..a1562e555f 100644 --- a/gnu/packages/guile-xyz.scm +++ b/gnu/packages/guile-xyz.scm @@ -6,7 +6,7 @@ ;;; Copyright © 2016, 2017, 2018, 2019, 2020, 2021 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2016 Erik Edrosa <erik.edrosa@gmail.com> ;;; Copyright © 2016, 2019, 2020, 2021 Eraim Flashner <efraim@flashner.co.il> -;;; Copyright © 2016, 2017 Alex Kost <alezost@gmail.com> +;;; Copyright © 2016, 2017, 2021 Alex Kost <alezost@gmail.com> ;;; Copyright © 2016, 2017 Adonay "adfeno" Felipe Nogueira <https://libreplanet.org/wiki/User:Adfeno> <adfeno@openmailbox.org> ;;; Copyright © 2016, 2021 Amirouche <amirouche@hypermove.net> ;;; Copyright © 2016, 2019, 2021 Jan (janneke) Nieuwenhuizen <janneke@gnu.org> @@ -38,6 +38,7 @@ ;;; Copyright © 2021 Leo Le Bouter <lle-bout@zaclys.net> ;;; Copyright © 2021 Zelphir Kaltstahl <zelphirkaltstahl@posteo.de> ;;; Copyright © 2021 Oleg Pykhalov <go.wigust@gmail.com> +;;; Copyright © 2021 Artyom V. Poptsov <poptsov.artyom@gmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -57,6 +58,7 @@ (define-module (gnu packages guile-xyz) #:use-module ((guix licenses) #:prefix license:) #:use-module (gnu packages) + #:use-module (gnu packages admin) #:use-module (gnu packages algebra) #:use-module (gnu packages aspell) #:use-module (gnu packages autotools) @@ -542,7 +544,7 @@ Note that 8sync is only available for Guile 2.2.") (native-inputs `(("pkg-config" ,pkg-config))) (inputs - `(("guile" ,guile-2.2))) + `(("guile" ,guile-3.0))) (home-page "https://github.com/alezost/guile-daemon") (synopsis "Evaluate code in a running Guile process") (description @@ -1462,7 +1464,7 @@ written in pure Scheme by using Guile's foreign function interface.") (define-public guile-xosd (package (name "guile-xosd") - (version "0.2.1") + (version "0.2.2") (source (origin (method url-fetch) (uri (string-append "https://github.com/alezost/" name @@ -1470,12 +1472,22 @@ written in pure Scheme by using Guile's foreign function interface.") "/" name "-" version ".tar.gz")) (sha256 (base32 - "1ri5065c16kmgrf2pysn2ymxjqi5302lhpb07wkl1jr75ym8fn8p")))) + "10r29bpyrsvjalnzkam2falj9k34lvxmch05zs606zp1nk93whp3")))) (build-system gnu-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'build 'set-cpath + (lambda* (#:key inputs #:allow-other-keys) + (setenv "CPATH" + (string-append + (assoc-ref inputs "guile") "/include/guile/3.0:" + (or (getenv "CPATH") ""))) + #t))))) (native-inputs `(("pkg-config" ,pkg-config))) (inputs - `(("guile" ,guile-2.2) + `(("guile" ,guile-3.0) ("libx11" ,libx11) ("libxext" ,libxext) ("libxinerama" ,libxinerama) @@ -1851,7 +1863,7 @@ user which package sets would they like to install from it.") (define-public guile-wisp (package (name "guile-wisp") - (version "1.0.5") + (version "1.0.6") (source (origin (method hg-fetch) (uri (hg-reference @@ -1860,7 +1872,7 @@ user which package sets would they like to install from it.") (file-name (git-file-name name version)) (sha256 (base32 - "00iknn03gf421gg3061g35fbraqrkcqypkrfn10rhlgg6j0lgk67")))) + "0df0vch2p6qymz3f96clrkl2gphjk6x7fbya236yzxc07hkz2j3g")))) (build-system gnu-build-system) (arguments `(#:modules ((guix build gnu-build-system) @@ -1876,13 +1888,11 @@ user which package sets would they like to install from it.") (modify-phases %standard-phases (replace 'bootstrap (lambda _ - (invoke "autoreconf" "-vif") - #t)) + (invoke "autoreconf" "-vif"))) (add-before 'configure 'patch-/usr/bin/env (lambda _ (substitute* "Makefile.in" - (("/usr/bin/env bash") (which "bash"))) - #t)) + (("/usr/bin/env bash") (which "bash"))))) ;; auto compilation breaks, but if we set HOME to /tmp, ;; that works ok (add-before 'check 'auto-compile-hacky-workaround @@ -1906,8 +1916,7 @@ user which package sets would they like to install from it.") (go (string-append object-dir base ".go"))) (invoke "guild" "compile" "-L" module-dir file "-o" go))) - (find-files module-dir "\\.scm$")) - #t))) + (find-files module-dir "\\.scm$"))))) (add-after 'install 'install-emacs-files (assoc-ref emacs:%standard-phases 'install)) (add-after 'install-emacs-files 'compile-emacs-files @@ -1939,7 +1948,7 @@ users and in some situations.") (define-public guile-udev (package (name "guile-udev") - (version "0.1.0") + (version "0.2.0") (source (origin (method git-fetch) (uri (git-reference @@ -1948,7 +1957,7 @@ users and in some situations.") (file-name (git-file-name name version)) (sha256 (base32 - "1l6csncjqnx58c6c3wdl7rshnhk4pzhjq2q8lnkg483564s9w5py")))) + "037md1sg7bgsa4478hz1dbsivsxzdnl5acadlrsh4ds2yxbsb5jp")))) (build-system gnu-build-system) (native-inputs `(("autoconf" ,autoconf) @@ -4599,8 +4608,8 @@ schedulers.") (license license:gpl3+))) (define-public guile-libyaml - (let ((commit "f5d33a6880e96571d3cb079ed7755ffc156cac46") - (revision "1")) + (let ((commit "2bdacb72a65ab63264b2edc9dac9692df7ec9b3e") + (revision "2")) (package (name "guile-libyaml") (version (git-version "0" revision commit)) @@ -4613,7 +4622,7 @@ schedulers.") (file-name (git-file-name name version)) (sha256 (base32 - "12x91983fh1j39zy7kbk19acc1rqdh8515ddx1mh7l26j04k9wgq")))) + "1bssby1ri1vjll2rvi8b33xr2ghwjyxsd4yc15najj3h8n2ss87i")))) (build-system gnu-build-system) (arguments `(#:modules (((guix build guile-build-system) @@ -4627,28 +4636,16 @@ schedulers.") (delete 'configure) (add-after 'unpack 'remove-unused-files (lambda* (#:key inputs #:allow-other-keys) - (for-each delete-file - '("guix.scm" "demo1.yml" "demo1.scm" - "yaml/libyaml.scm" - ;; This file is mismatched with the generated FFI code. - "yaml/ffi-help-rt.scm")) - (copy-file (search-input-file - inputs "/share/guile/site/3.0/system/ffi-help-rt.scm") - "yaml/ffi-help-rt.scm") - (substitute* "yaml/ffi-help-rt.scm" - (("system ffi-help-rt") "yaml ffi-help-rt")) - #true)) + (for-each delete-file '("guix.scm" "demo1.yml" "demo1.scm")))) (add-before 'build 'build-ffi (lambda* (#:key inputs #:allow-other-keys) (invoke "guild" "compile-ffi" "--no-exec" ; allow us to patch the generated file "yaml/libyaml.ffi") (substitute* "yaml/libyaml.scm" - (("system ffi-help-rt") "yaml ffi-help-rt") (("dynamic-link \"libyaml\"") (format #false "dynamic-link \"~a/lib/libyaml\"" - (assoc-ref inputs "libyaml")))) - #true)) + (assoc-ref inputs "libyaml")))))) (replace 'build (assoc-ref guile:%standard-phases 'build)) (delete 'install)))) @@ -4656,9 +4653,8 @@ schedulers.") `(("guile" ,guile-3.0) ("libyaml" ,libyaml))) (propagated-inputs - `(("guile-bytestructures" ,guile-bytestructures))) - (native-inputs - `(("nyacc" ,nyacc))) + `(("guile-bytestructures" ,guile-bytestructures) + ("nyacc" ,nyacc))) (home-page "https://github.com/mwette/guile-libyaml") (synopsis "Guile wrapper for libyaml") (description @@ -4805,3 +4801,192 @@ It provides a generic library for writing implementations of a netlink protocol, a low-level rtnetlink implementation that uses that library and a high-level API for network management that uses rtnetlink.") (license license:gpl3+))) + +(define-public guile-gitlab + (package + (name "guile-gitlab") + (version "0.2.1") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/artyom-poptsov/guile-gitlab") + (commit (string-append "v" version)))) + (file-name (string-append name "-" version)) + (sha256 + (base32 + "0srkmchd4kmfa7q65r6fdzwklhgdlck1ll0s7smzs8ddjdgz2lwm")))) + (build-system gnu-build-system) + (arguments + `(#:make-flags '("GUILE_AUTO_COMPILE=0") ;to prevent guild warnings + #:modules (((guix build guile-build-system) + #:select (target-guile-effective-version)) + ,@%gnu-build-system-modules) + #:imported-modules ((guix build guile-build-system) + ,@%gnu-build-system-modules) + #:phases + (modify-phases %standard-phases + (add-after 'install 'wrap-program + (lambda* (#:key inputs outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (bin (string-append out "/bin")) + (guile-lib (assoc-ref inputs "guile-lib")) + (json (assoc-ref inputs "guile-json")) + (tls (assoc-ref inputs "guile-gnutls")) + (version (target-guile-effective-version)) + (scm (string-append "/share/guile/site/" + version)) + (go (string-append "/lib/guile/" + version "/site-ccache"))) + (wrap-program (string-append bin "/gitlab-cli") + `("GUILE_LOAD_PATH" prefix + (,(string-append out scm) + ,(string-append guile-lib scm) + ,(string-append json scm) + ,(string-append tls scm))) + `("GUILE_LOAD_COMPILED_PATH" prefix + (,(string-append out go) + ,(string-append guile-lib go) + ,(string-append json go) + ,(string-append tls go)))))))))) + (native-inputs + `(("autoconf" ,autoconf) + ("automake" ,automake) + ("pkg-config" ,pkg-config) + ("texinfo" ,texinfo))) + (inputs + `(("bash" ,bash-minimal) + ("guile" ,guile-2.2) + ("guile-json" ,guile2.2-json) + ("guile-lib" ,guile2.2-lib) + ("guile-gnutls" ,guile2.2-gnutls))) + (home-page "https://github.com/artyom-poptsov/guile-gitlab") + (synopsis "Guile interface to GitLab") + (description + "This package provides bindings to the GitLab Community Edition REST API +as well as the @samp{gitlab-cli} command line tool for interacting with a +GitLab instance.") + (license license:gpl3))) + +(define-public guile-smc + (package + (name "guile-smc") + (version "0.3.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/artyom-poptsov/guile-smc") + (commit (string-append "v" version)))) + (file-name (string-append name "-" version)) + (sha256 + (base32 + "0szkjmasi70m1vppck7nhdxg4lnxzjq6mihi6r1552s8sxm5z008")))) + (build-system gnu-build-system) + (arguments + `(#:make-flags '("GUILE_AUTO_COMPILE=0") ;to prevent guild warnings + #:modules (((guix build guile-build-system) + #:select (target-guile-effective-version)) + ,@%gnu-build-system-modules) + #:imported-modules ((guix build guile-build-system) + ,@%gnu-build-system-modules) + #:phases + (modify-phases %standard-phases + (delete 'strip) + (add-after 'configure 'patch + (lambda* (#:key inputs outputs #:allow-other-keys) + (substitute* "modules/smc/core/log.scm" + ((" #:use-module \\(logging logger\\)") + (string-append + " #:use-module (logging logger)\n" + " #:use-module (logging rotating-log)")) + (("#:init-value \"logger\"") + (format #f + "#:init-value \"~a/bin/logger\"" + (assoc-ref inputs "inetutils"))) + (("\\(add-handler! %logger %syslog\\)") + (string-append + "(add-handler! %logger\n" + " (make <rotating-log>\n" + " #:file-name \"smc.log\"))\n"))) + #t)) + (add-after 'install 'wrap-program + (lambda* (#:key inputs outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (bin (string-append out "/bin")) + (guile-lib (assoc-ref inputs "guile-lib")) + (version (target-guile-effective-version)) + (scm (string-append "/share/guile/site/" + version)) + (go (string-append "/lib/guile/" + version "/site-ccache"))) + (wrap-program (string-append bin "/smc") + `("GUILE_LOAD_PATH" prefix + (,(string-append out scm) + ,(string-append guile-lib scm))) + `("GUILE_LOAD_COMPILED_PATH" prefix + (,(string-append out go) + ,(string-append guile-lib go))))) + #t))))) + (native-inputs + `(("autoconf" ,autoconf) + ("automake" ,automake) + ("pkg-config" ,pkg-config) + ("texinfo" ,texinfo))) + (inputs + `(("bash" ,bash-minimal) + ("guile" ,guile-3.0) + ("guile-lib" ,guile-lib) + ("inetutils" ,inetutils))) + (home-page "https://github.com/artyom-poptsov/guile-smc") + (synopsis "GNU Guile state machine compiler") + (description + "Guile-SMC is a state machine compiler that allows users to describe +finite state machines (FSMs) in Scheme in terms of transition tables. It is +capable to generate such transition tables from a @url{https://plantuml.com/, +PlantUML} state diagrams. + +A transition table can be verified and checked for dead-ends and infinite +loops. Also Guile-SMC FSMs gather statistics when they run. + +Guile-SMC comes with a Scheme program called @command{smc} -- a state machine +compiler itself. It produces a Scheme code for an FSM from the PlantUML +format. This tool is meant to be called on a PlantUML file when a program +with a FSM is being built (for example, from a Makefile.)") + (license license:gpl3))) + +(define-public guile-ini + (package + (name "guile-ini") + (version "0.3.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/artyom-poptsov/guile-ini") + (commit (string-append "v" version)))) + (file-name (string-append name "-" version)) + (sha256 + (base32 + "0injn60530valhx3gsmdp72g6z886yf0n08hscky21h3dafm14kc")))) + (build-system gnu-build-system) + (arguments + `(#:make-flags '("GUILE_AUTO_COMPILE=0"))) ;to prevent guild warnings + (native-inputs + `(("autoconf" ,autoconf) + ("automake" ,automake) + ("pkg-config" ,pkg-config) + ("texinfo" ,texinfo))) + (inputs + `(("bash" ,bash-minimal) + ("guile" ,guile-3.0) + ("guile-lib" ,guile-lib))) + (propagated-inputs + `(("guile-smc" ,guile-smc))) + (home-page "https://github.com/artyom-poptsov/guile-ini") + (synopsis "Guile library for INI format support") + (description + "@code{guile-ini} is a GNU Guile library for working with the +@url{https://en.wikipedia.org/wiki/INI_file, INI format}. This library +provides API for reading and writing INI data.") + (license license:gpl3))) diff --git a/gnu/packages/hardware.scm b/gnu/packages/hardware.scm index 2bf3576d5a..46ac96d679 100644 --- a/gnu/packages/hardware.scm +++ b/gnu/packages/hardware.scm @@ -75,7 +75,7 @@ (define-public hwinfo (package (name "hwinfo") - (version "21.77") + (version "21.78") (home-page "https://github.com/openSUSE/hwinfo") (source (origin @@ -86,7 +86,7 @@ (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "04xfgixfl9m4hy87xm6drn46x3ybr9hsksar0d6f77hb4l6hprvv")) + (base32 "0v3smzdplh0cdvl19dw3in8gfmkhb2fgkfl60aqhn9qlbjf3p0mr")) (modules '((guix build utils))) (snippet @@ -599,7 +599,7 @@ technology, such as head mounted displays with built in head tracking.") (define-public wavemon (package (name "wavemon") - (version "0.9.3") + (version "0.9.4") (source (origin (method git-fetch) @@ -608,7 +608,7 @@ technology, such as head mounted displays with built in head tracking.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "0m9n5asjxs1ir5rqprigqcrm976mgjvh4yql1jhfnbszwbf95193")))) + (base32 "0s3yz15vzx90fxyb8bgryksn0cr2gpz9inbcx4qjrgs7zfbm4pgh")))) (build-system gnu-build-system) (arguments `(#:make-flags diff --git a/gnu/packages/haskell-apps.scm b/gnu/packages/haskell-apps.scm index 5dcf6c1cb2..8ef5bb5788 100644 --- a/gnu/packages/haskell-apps.scm +++ b/gnu/packages/haskell-apps.scm @@ -316,14 +316,14 @@ to @code{cabal repl}).") (define-public git-annex (package (name "git-annex") - (version "8.20211028") + (version "8.20211123") (source (origin (method url-fetch) (uri (string-append "https://hackage.haskell.org/package/" "git-annex/git-annex-" version ".tar.gz")) (sha256 - (base32 "0bff1bchp60hbslb9yaagvd7hym26w0c3gkkssm7sildwqazwpng")))) + (base32 "0i9dhh601axv0b1i56yzn6jnfp160z530fp9pd557kpq4nbvg5kl")))) (build-system haskell-build-system) (arguments `(#:configure-flags @@ -372,15 +372,15 @@ to @code{cabal repl}).") (format out "main = buildMansOrWarn~%"))) (invoke "runhaskell" "Build/MakeMans.hs"))) (replace 'check - (lambda _ + (lambda* (#:key tests? #:allow-other-keys) ;; We need to set the path so that Git recognizes ;; `git annex' as a custom command. (setenv "PATH" (string-append (getenv "PATH") ":" (getcwd) "/dist/build/git-annex")) - (with-directory-excursion "dist/build/git-annex" - (symlink "git-annex" "git-annex-shell")) - (invoke "git-annex" "test") - #t)) + (when tests? + (with-directory-excursion "dist/build/git-annex" + (symlink "git-annex" "git-annex-shell")) + (invoke "git-annex" "test")))) (add-after 'check 'unpatch-shell-and-rebuild (lambda args ;; Undo `patch-shell-for-tests'. diff --git a/gnu/packages/image-viewers.scm b/gnu/packages/image-viewers.scm index d750458240..d2307a33e8 100644 --- a/gnu/packages/image-viewers.scm +++ b/gnu/packages/image-viewers.scm @@ -22,6 +22,7 @@ ;;; Copyright © 2021 jgart <jgart@dismail.de> ;;; Copyright © 2021 Guillaume Le Vaillant <glv@posteo.net> ;;; Copyright © 2021 Zheng Junjie <873216071@qq.com> +;;; Copyright © 2021 dissent <disseminatedissent@protonmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -50,6 +51,7 @@ #:use-module (guix build-system python) #:use-module (gnu packages autotools) #:use-module (gnu packages algebra) + #:use-module (gnu packages backup) #:use-module (gnu packages base) #:use-module (gnu packages bash) #:use-module (gnu packages boost) @@ -73,6 +75,7 @@ #:use-module (gnu packages linux) #:use-module (gnu packages maths) #:use-module (gnu packages ncurses) + #:use-module (gnu packages pdf) #:use-module (gnu packages perl) #:use-module (gnu packages perl-check) #:use-module (gnu packages photo) @@ -494,7 +497,7 @@ needs.") (define-public viewnior (package (name "viewnior") - (version "1.7") + (version "1.8") (source (origin (method git-fetch) @@ -503,8 +506,7 @@ needs.") (commit (string-append name "-" version)))) (file-name (git-file-name name version)) (sha256 - (base32 - "0y4hk3vq8psba5k615w18qj0kbdfp5w0lm98nv5apy6hmcpwfyig")))) + (base32 "14qvx1wajncd5ab0207274cwk32f4ipfnlaci6phmah0cwra2did")))) (build-system meson-build-system) (arguments '(#:phases @@ -525,7 +527,7 @@ needs.") `(("exiv2" ,exiv2) ("gdk-pixbuf" ,gdk-pixbuf) ("gtk+-2" ,gtk+-2))) - (home-page "http://siyanpanayotov.com/project/viewnior") + (home-page "https://siyanpanayotov.com/project/viewnior") (synopsis "Simple, fast and elegant image viewer") (description "Viewnior is an image viewer program. Created to be simple, fast and elegant. Its minimalistic interface provides more screenspace for @@ -941,6 +943,49 @@ rotate left/right, jump/forward/backward images, filename filter and use it to set X desktop background.") (license license:gpl2))) +(define-public pqiv + (package + (name "pqiv") + (version "2.12") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/phillipberndt/pqiv") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "18nvrqmlifh4m8nfs0d19sb9d1l3a95xc89qxqdr881jcxdsgflw")))) + (build-system gnu-build-system) + (native-inputs + `(("pkg-config" ,pkg-config))) + (inputs + `(("ffmpeg" ,ffmpeg) + ("gtk+" ,gtk+) + ("imagemagick" ,imagemagick) + ("libarchive" ,libarchive) + ("libspectre" ,libspectre) + ("libwebp" ,libwebp) + ("poppler" ,poppler))) + (arguments + `(#:tests? #f ;no tests + #:phases + (modify-phases %standard-phases + (delete 'configure)) ;no configure script + #:make-flags + (list + (string-append "PREFIX=" (assoc-ref %outputs "out")) + (string-append "CC=" ,(cc-for-target)) + (string-append "PKG_CONFIG=" ,(pkg-config-for-target))))) + (home-page "https://www.pberndt.com/Programme/Linux/pqiv") + (synopsis "Powerful image viewer with minimal UI") + (description + "pqiv is a GTK-3 based command-line image viewer with a minimal UI. +It is highly customizable, can be fully controlled from scripts, and has +support for various file formats including PDF, Postscript, video files and +archives.") + (license license:gpl3+))) + (define-public nomacs (package (name "nomacs") diff --git a/gnu/packages/java.scm b/gnu/packages/java.scm index 94975e565a..b929cb9381 100644 --- a/gnu/packages/java.scm +++ b/gnu/packages/java.scm @@ -2631,14 +2631,44 @@ new Date();")) ;; The build system copies a few .template files from the ;; source directory into the build directory and then modifies ;; them in-place. So these files have to be writable. - (for-each - (lambda (file) - (invoke "chmod" "u+w" file)) + (for-each make-file-writable (find-files "src/java.base/share/classes/jdk/internal/misc/" - "\\.template$")) - #t)))))) + "\\.template$")))))))) (home-page "https://openjdk.java.net/projects/jdk/16"))) +(define-public openjdk17 + (package + (inherit openjdk16) + (name "openjdk") + (version "17.0.1") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/openjdk/jdk17u") + (commit (string-append "jdk-" version "-ga")))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1l1jgbz8q7zq66npfg88r0l5xga427vrz35iys09j44b6qllrldd")))) + (native-inputs + `(("autoconf" ,autoconf) + ("openjdk16:jdk" ,openjdk16 "jdk") + ("pkg-config" ,pkg-config) + ("unzip" ,unzip) + ("which" ,which) + ("zip" ,zip))) + (arguments + (substitute-keyword-arguments (package-arguments openjdk16) + ((#:phases phases) + `(modify-phases ,phases + (replace 'fix-java-shebangs + (lambda _ + ;; This file was "fixed" by patch-source-shebangs, but it requires + ;; this exact first line. + (substitute* "make/data/blockedcertsconverter/blocked.certs.pem" + (("^#!.*") "#! java BlockedCertsConverter SHA-256\n")))))))) + (home-page "https://openjdk.java.net/projects/jdk/17"))) + (define-public icedtea icedtea-8) diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm index 6e15d5599f..28c36d3037 100644 --- a/gnu/packages/julia-xyz.scm +++ b/gnu/packages/julia-xyz.scm @@ -3,6 +3,7 @@ ;;; Copyright © 2021 Simon Tournier <zimon.toutoune@gmail.com> ;;; Copyright © 2021 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2021 Vinicius Monego <monego@posteo.net> +;;; Copyright © 2021 jgart <jgart@dismail.de> ;;; ;;; This file is part of GNU Guix. ;;; @@ -2767,6 +2768,25 @@ extensions to the iterator interface.") "Common functional iterator patterns (formerly @code{Iterators.jl}).") (license license:expat))) +(define-public julia-jive + (package + (name "julia-jive") + (version "0.2.20") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/wookay/Jive.jl") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0khwsdh8472jxcfi9lqw14l49sqlbsixql1jb4irnyajxkdjrcsf")))) + (build-system julia-build-system) + (home-page "https://github.com/wookay/Jive.jl") + (synopsis "Julia package to help with writing tests") + (description "@code{Jive.jl} is a Julia package to help with writing tests.") + (license license:expat))) + (define-public julia-json (package (name "julia-json") @@ -3106,6 +3126,29 @@ user handle multiple input/output devices and decide what media types get displayed where.") (license license:expat))) +(define-public julia-millboard + (package + (name "julia-millboard") + (version "0.2.5") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/wookay/Millboard.jl") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0k9jqgp285qhckldvvsmfk6s69dcr8s74m2fijgm2vxjj2gqjs1n")))) + (build-system julia-build-system) + (native-inputs + `(("julia-jive" ,julia-jive))) + (home-page "https://github.com/wookay/Millboard.jl") + (synopsis "Displaying data in tables for Julia") + (description + "@code{Millboard.jl} provides a library for getting data in a tablized +format to arrange into rows and columns of cells.") + (license license:expat))) + (define-public julia-missings (package (name "julia-missings") @@ -4328,6 +4371,29 @@ types can be added to a trait after the creation of the trait, whereas Union types are fixed after creation.") (license license:expat))) +(define-public julia-softglobalscope + (package + (name "julia-softglobalscope") + (version "1.1.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/stevengj/SoftGlobalScope.jl") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1n3l0al1vw5jpb4k9a29a71666cdb617nmiqg34wcmyfzrxpvv39")))) + (build-system julia-build-system) + (home-page "https://github.com/stevengj/SoftGlobalScope.jl") + (synopsis "Utilities for soft global scope in interactive Julia environments") + (description + "SoftGlobalScope is a package for the Julia language that simplifies the +variable scoping rules for code in global scope. It is intended for interactive +shells to make it easier to work interactively with Julia, especially for +beginners.") + (license license:expat))) + (define-public julia-sortingalgorithms (package (name "julia-sortingalgorithms") diff --git a/gnu/packages/kde.scm b/gnu/packages/kde.scm index 20916cf164..858b70a9c1 100644 --- a/gnu/packages/kde.scm +++ b/gnu/packages/kde.scm @@ -222,7 +222,7 @@ browser for easy news reading.") (license license:gpl2+))) (define-public kdenlive - (let ((version "21.08.2")) + (let ((version "21.08.3")) (package (name "kdenlive") (version version) @@ -234,7 +234,7 @@ browser for easy news reading.") (commit (string-append "v" version)))) (file-name (string-append name "-" version "-checkout")) (sha256 - (base32 "1l78xjdf1bmj3s8kysaqqgh67mb3vrc96rsdnp0i4awlyfsh89d7")))) + (base32 "0lpspak5djkbn2xbmmbxls258310g45n3a08sghkjl08bx6ilvc9")))) (build-system qt-build-system) (native-inputs `(("extra-cmake-modules" ,extra-cmake-modules) @@ -275,7 +275,8 @@ browser for easy news reading.") ;; XXX: there is a single test that spawns other tests and ;; 1/3 tests failed and 1/327 assertions failed. It seems ;; that individual tests can't be skipped. - `(#:tests? #f + `(#:configure-flags (list "-DBUILD_TESTING=off") + #:tests? #f #:phases (modify-phases %standard-phases (add-after 'install 'wrap-executable diff --git a/gnu/packages/language.scm b/gnu/packages/language.scm index 83838b5689..1eb3f5087b 100644 --- a/gnu/packages/language.scm +++ b/gnu/packages/language.scm @@ -476,7 +476,7 @@ languages.") (propagated-inputs `(("perl-lingua-en-words2nums" ,perl-lingua-en-words2nums))) (home-page "https://metacpan.org/release/Lingua-EN-FindNumber") - (synopsis "Locate (written) numbers in English text ") + (synopsis "Locate (written) numbers in English text") (description "This module provides a regular expression for finding numbers in English text. It also provides functions for extracting and manipulating such numbers.") diff --git a/gnu/packages/less.scm b/gnu/packages/less.scm index 413cd05be6..7ebc1e7dc9 100644 --- a/gnu/packages/less.scm +++ b/gnu/packages/less.scm @@ -59,7 +59,7 @@ text editors.") (define-public lesspipe (package (name "lesspipe") - (version "1.90") + (version "1.91") (source (origin (method git-fetch) (uri (git-reference @@ -68,7 +68,7 @@ text editors.") (file-name (git-file-name name version)) (sha256 (base32 - "17gv4nr9fxrk3png477pgiimdz8minp9scmqg2nxa96jfz4sk4li")))) + "04dqvq6j4h451xqbvxzv6pv679hzzfm39pdm5vg7h3r45gzg0kps")))) (build-system gnu-build-system) (arguments '(#:tests? #f ; no tests diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index a151785db6..a8c48f1bb7 100644 --- a/gnu/packages/linux.scm +++ b/gnu/packages/linux.scm @@ -355,25 +355,25 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS." ;; The current "stable" kernels. That is, the most recently released major ;; versions that are still supported upstream. -(define-public linux-libre-5.14-version "5.14.21") -(define-public linux-libre-5.14-gnu-revision "gnu") -(define deblob-scripts-5.14 +(define-public linux-libre-5.15-version "5.15.6") +(define-public linux-libre-5.15-gnu-revision "gnu") +(define deblob-scripts-5.15 (linux-libre-deblob-scripts - linux-libre-5.14-version - linux-libre-5.14-gnu-revision - (base32 "11zax57brk8bl75q68c71xsdlvslj48wpmrv8rh34sb8wym9n4mc") - (base32 "1xmmr26lpffc4dfmrkvh3gdkkr8666fcyvgam560vbyd2b2qkd78"))) -(define-public linux-libre-5.14-pristine-source - (let ((version linux-libre-5.14-version) - (hash (base32 "1cr381c179nfdrq95l4j56c4ygw09sxv493553ix4b80naf2a6pl"))) + linux-libre-5.15-version + linux-libre-5.15-gnu-revision + (base32 "1rfhwfzifmbpnrhmrn3srm736nkm1v6affw915d0fgqzqgi8qfai") + (base32 "04fj1x3zmi310cr3m9hxpi26gdcmwfsqciv5yb6q6rrnqjqs1pc0"))) +(define-public linux-libre-5.15-pristine-source + (let ((version linux-libre-5.15-version) + (hash (base32 "1w0plw9rzk2c0g8yxzwj7c6wkq538sy56mx1skmf58wrl83bmsdk"))) (make-linux-libre-source version (%upstream-linux-source version hash) - deblob-scripts-5.14))) + deblob-scripts-5.15))) ;; The "longterm" kernels — the older releases with long-term upstream support. ;; Here are the support timelines: ;; <https://www.kernel.org/category/releases.html> -(define-public linux-libre-5.10-version "5.10.81") +(define-public linux-libre-5.10-version "5.10.83") (define-public linux-libre-5.10-gnu-revision "gnu1") (define deblob-scripts-5.10 (linux-libre-deblob-scripts @@ -383,12 +383,12 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS." (base32 "024rz0bp3n3r5nkwbib7byx10d72c2fh5cw9iv00diyzgnp819g7"))) (define-public linux-libre-5.10-pristine-source (let ((version linux-libre-5.10-version) - (hash (base32 "1nssv94zivx08vrxxflq4dxk5fxl3azsqlnzvw58qnf469hniqd2"))) + (hash (base32 "0w4vq8wby3m9f5ryssh6z948m6zj1bjz9x432805dnrxyd1rl9gg"))) (make-linux-libre-source version (%upstream-linux-source version hash) deblob-scripts-5.10))) -(define-public linux-libre-5.4-version "5.4.161") +(define-public linux-libre-5.4-version "5.4.163") (define-public linux-libre-5.4-gnu-revision "gnu1") (define deblob-scripts-5.4 (linux-libre-deblob-scripts @@ -398,12 +398,12 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS." (base32 "1a0k9i8gnzkyvfr80f8xw2fnxfwddhz1pzicz9fh0y3jzzkzk45p"))) (define-public linux-libre-5.4-pristine-source (let ((version linux-libre-5.4-version) - (hash (base32 "19rrz7fzka506bpgy229v1sbaxc2s609ldmxc2522y9h5aswcj9i"))) + (hash (base32 "1glh0azkrqdwydvbz9rp3czc5ppb72gq7svl3zbkjc6qfqbzwik2"))) (make-linux-libre-source version (%upstream-linux-source version hash) deblob-scripts-5.4))) -(define-public linux-libre-4.19-version "4.19.217") +(define-public linux-libre-4.19-version "4.19.219") (define-public linux-libre-4.19-gnu-revision "gnu1") (define deblob-scripts-4.19 (linux-libre-deblob-scripts @@ -413,12 +413,12 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS." (base32 "1a0k9i8gnzkyvfr80f8xw2fnxfwddhz1pzicz9fh0y3jzzkzk45p"))) (define-public linux-libre-4.19-pristine-source (let ((version linux-libre-4.19-version) - (hash (base32 "01500jcjvhbkn7xcan564jw0nnwc12cf8hhvl8118jqqqw612lc5"))) + (hash (base32 "1nq9228zm24d8azvv6d6r5iw8lfkb7z5lblyhk137mydzdqwsklg"))) (make-linux-libre-source version (%upstream-linux-source version hash) deblob-scripts-4.19))) -(define-public linux-libre-4.14-version "4.14.255") +(define-public linux-libre-4.14-version "4.14.256") (define-public linux-libre-4.14-gnu-revision "gnu1") (define deblob-scripts-4.14 (linux-libre-deblob-scripts @@ -428,12 +428,12 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS." (base32 "1a0k9i8gnzkyvfr80f8xw2fnxfwddhz1pzicz9fh0y3jzzkzk45p"))) (define-public linux-libre-4.14-pristine-source (let ((version linux-libre-4.14-version) - (hash (base32 "1mxjwqijnlvrdbpd973kdycz1dwklfkj9vpnj1cihgsf880q02zh"))) + (hash (base32 "180s2zmkfxk7af9nnkmfi2cs56af6vwyd21hjcfdxiygjm7j114p"))) (make-linux-libre-source version (%upstream-linux-source version hash) deblob-scripts-4.14))) -(define-public linux-libre-4.9-version "4.9.290") +(define-public linux-libre-4.9-version "4.9.291") (define-public linux-libre-4.9-gnu-revision "gnu1") (define deblob-scripts-4.9 (linux-libre-deblob-scripts @@ -443,12 +443,12 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS." (base32 "1a0k9i8gnzkyvfr80f8xw2fnxfwddhz1pzicz9fh0y3jzzkzk45p"))) (define-public linux-libre-4.9-pristine-source (let ((version linux-libre-4.9-version) - (hash (base32 "1ns0xbcgv0ix4b3xkcws8g3ks1a31kzc5whmkf9arz1k8si5mpnd"))) + (hash (base32 "0lwb9mb4s6qnwklygvfsr5ap85k83w1apkbbfdzzacfn9rvpfpdm"))) (make-linux-libre-source version (%upstream-linux-source version hash) deblob-scripts-4.9))) -(define-public linux-libre-4.4-version "4.4.292") +(define-public linux-libre-4.4-version "4.4.293") (define-public linux-libre-4.4-gnu-revision "gnu1") (define deblob-scripts-4.4 (linux-libre-deblob-scripts @@ -458,7 +458,7 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS." (base32 "1a0k9i8gnzkyvfr80f8xw2fnxfwddhz1pzicz9fh0y3jzzkzk45p"))) (define-public linux-libre-4.4-pristine-source (let ((version linux-libre-4.4-version) - (hash (base32 "0v5rz8na1d458grc49x3j1951mhvxvqzjq5g9rv1hi0p9rjala97"))) + (hash (base32 "1z9hc68v8fvph29l2w3md4734hhgp36sy8mzdlkmdrlkjihq6bvd"))) (make-linux-libre-source version (%upstream-linux-source version hash) deblob-scripts-4.4))) @@ -491,21 +491,15 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS." (patches (append (origin-patches source) patches)))) -(define-public linux-libre-5.14-source - (source-with-patches linux-libre-5.14-pristine-source +(define-public linux-libre-5.15-source + (source-with-patches linux-libre-5.15-pristine-source (list %boot-logo-patch - %linux-libre-arm-export-__sync_icache_dcache-patch - ;; Pinebook Pro patch to fix LCD display - (search-patch - "linux-libre-arm64-generic-pinebook-lcd.patch")))) + %linux-libre-arm-export-__sync_icache_dcache-patch))) (define-public linux-libre-5.10-source (source-with-patches linux-libre-5.10-pristine-source (list %boot-logo-patch - %linux-libre-arm-export-__sync_icache_dcache-patch - ;; Pinebook Pro patch to fix LCD display - (search-patch - "linux-libre-arm64-generic-pinebook-lcd.patch")))) + %linux-libre-arm-export-__sync_icache_dcache-patch))) (define-public linux-libre-5.4-source (source-with-patches linux-libre-5.4-pristine-source @@ -609,10 +603,10 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS." (description "Headers of the Linux-Libre kernel.") (license license:gpl2))) -(define-public linux-libre-headers-5.14 - (make-linux-libre-headers* linux-libre-5.14-version - linux-libre-5.14-gnu-revision - linux-libre-5.14-source)) +(define-public linux-libre-headers-5.15 + (make-linux-libre-headers* linux-libre-5.15-version + linux-libre-5.15-gnu-revision + linux-libre-5.15-source)) (define-public linux-libre-headers-5.10 (make-linux-libre-headers* linux-libre-5.10-version @@ -917,18 +911,18 @@ It has been modified to remove all non-free binary blobs.") ;;; Generic kernel packages. ;;; -(define-public linux-libre-5.14 - (make-linux-libre* linux-libre-5.14-version - linux-libre-5.14-gnu-revision - linux-libre-5.14-source +(define-public linux-libre-5.15 + (make-linux-libre* linux-libre-5.15-version + linux-libre-5.15-gnu-revision + linux-libre-5.15-source '("x86_64-linux" "i686-linux" "armhf-linux" "aarch64-linux" "riscv64-linux") #:configuration-file kernel-config)) -(define-public linux-libre-version linux-libre-5.14-version) -(define-public linux-libre-gnu-revision linux-libre-5.14-gnu-revision) -(define-public linux-libre-pristine-source linux-libre-5.14-pristine-source) -(define-public linux-libre-source linux-libre-5.14-source) -(define-public linux-libre linux-libre-5.14) +(define-public linux-libre-version linux-libre-5.15-version) +(define-public linux-libre-gnu-revision linux-libre-5.15-gnu-revision) +(define-public linux-libre-pristine-source linux-libre-5.15-pristine-source) +(define-public linux-libre-source linux-libre-5.15-source) +(define-public linux-libre linux-libre-5.15) (define-public linux-libre-5.10 (make-linux-libre* linux-libre-5.10-version @@ -1159,9 +1153,9 @@ It has been modified to remove all non-free binary blobs.") (define-public linux-libre-with-bpf (let ((base-linux-libre (make-linux-libre* - linux-libre-5.14-version - linux-libre-5.14-gnu-revision - linux-libre-5.14-source + linux-libre-5.15-version + linux-libre-5.15-gnu-revision + linux-libre-5.15-source '("x86_64-linux" "i686-linux" "armhf-linux" "aarch64-linux" "riscv64-linux") #:extra-version "bpf" @@ -1381,8 +1375,8 @@ network adapters.") (license license:gpl2)))) (define-public rtl8812au-aircrack-ng-linux-module - (let ((commit "b8167e66b4ac046b3b76c2c40008d84528e91594") - (revision "5")) + (let ((commit "307d694076b056588c652c2bdaa543a89eb255d9") + (revision "6")) (package (inherit rtl8821ce-linux-module) (name "rtl8812au-aircrack-ng-linux-module") @@ -1395,7 +1389,7 @@ network adapters.") (commit commit))) (file-name (git-file-name name version)) (sha256 - (base32 "1940f2yz5c4q2fhcd91zfzl32fhdsgr297vzamm7nd8kdk0gymi2")) + (base32 "1g2zga7jqzp4azwqpgxxx3lg07ijaaqw3zqnaa3i2brycwlnf8l9")) (modules '((guix build utils))) (snippet '(begin @@ -1417,7 +1411,7 @@ RTL8812AU, RTL8821AU, and RTL8814AU chips.") (define-public vhba-module (package (name "vhba-module") - (version "20210418") + (version "20211023") (source (origin (method url-fetch) @@ -1425,7 +1419,7 @@ RTL8812AU, RTL8821AU, and RTL8814AU chips.") "http://downloads.sourceforge.net/cdemu/vhba-module/vhba-module-" version ".tar.xz")) (sha256 - (base32 "119zgav6caialmf3hr096wkf72l9h76sqc9w5dhx26kj4yp85g8q")))) + (base32 "045zvsdb2yjhzhmb6b7rzsn151ylygz0civ8sl3gmki8m6m7n230")))) (build-system linux-module-build-system) (arguments `(#:tests? #f)) ; no test suite @@ -1468,18 +1462,19 @@ graphics card on Optimus laptops.") (define-public ddcci-driver-linux (package (name "ddcci-driver-linux") - (version "0.3.4") + ;; Use an as-yet unmerged commit to fix the build with Linux-Libre 5.15: + ;; https://gitlab.com/ddcci-driver-linux/ddcci-driver-linux/-/merge_requests/8 + (version "0.4.1-0.bf9d798") (source (origin (method git-fetch) (uri (git-reference (url "https://gitlab.com/ddcci-driver-linux/ddcci-driver-linux.git") - (commit (string-append "v" version)))) + (commit "bf9d79852cbd0aa5c2e288ce51b8280f74a1f5d2"))) (file-name (git-file-name name version)) (sha256 - (base32 - "0b50hhkna6ika2vwahzb9za9b41g39ialgv5y1y0kakqi50qi0ld")))) + (base32 "1lww3mnqhxqzj0qbxzbwbq93v9zw49myp7p9ib873a5izbq8nadi")))) (build-system linux-module-build-system) (arguments `(#:tests? #f ; no tests @@ -1491,16 +1486,14 @@ graphics card on Optimus laptops.") (lambda (module) (with-directory-excursion module (apply (assoc-ref %standard-phases 'build) args))) - '("ddcci" "ddcci-backlight")) - #t)) + '("ddcci" "ddcci-backlight")))) (replace 'install (lambda args (for-each (lambda (module) (with-directory-excursion module (apply (assoc-ref %standard-phases 'install) args))) - '("ddcci" "ddcci-backlight")) - #t))))) + '("ddcci" "ddcci-backlight"))))))) (home-page "https://gitlab.com/ddcci-driver-linux/ddcci-driver-linux") (synopsis "Pair of Linux kernel drivers for DDC/CI monitors") (description "This package provides two Linux kernel drivers, ddcci and @@ -1756,14 +1749,16 @@ It provides the commands @code{powercap-info} and @code{powercap-set}.") (define-public powerstat (package (name "powerstat") - (version "0.02.26") + (version "0.02.27") (source (origin - (method url-fetch) - (uri (string-append "https://kernel.ubuntu.com/~cking/tarballs/" - "powerstat/powerstat-" version ".tar.gz")) + (method git-fetch) + (uri (git-reference + (url "https://github.com/ColinIanKing/powerstat") + (commit (string-append "V" version)))) + (file-name (git-file-name name version)) (sha256 - (base32 "18m85k83hryj05vix63fay1hh0sb9h87hy5r7g1dqg2y9i8lzgxk")))) + (base32 "1ik5yv2bhz2hvyga4h1m28rf0xpi20zpqm4swhvskyf1g6qf381z")))) (build-system gnu-build-system) (arguments `(#:make-flags @@ -2099,14 +2094,14 @@ slabtop, tload, top, vmstat, w, watch and sysctl.") (define-public usbutils (package (name "usbutils") - (version "013") + (version "014") (source (origin (method url-fetch) (uri (string-append "mirror://kernel.org/linux/utils/usb/usbutils/" "usbutils-" version ".tar.xz")) (sha256 - (base32 "0f0klk6d3hmbpf6p4dcwa1qjzblmkhbxs1wsw87aidvqri7lj8wy")))) + (base32 "0sgwfvr1b5w3ai1c0rmvzhk67y9vh7bq490rcxxj4q05svx9q1rs")))) (build-system gnu-build-system) (outputs (list "out" "python")) (arguments @@ -2115,12 +2110,7 @@ slabtop, tload, top, vmstat, w, watch and sysctl.") (add-before 'bootstrap 'patch-bootstrap-scripts (lambda _ (substitute* "usbhid-dump/bootstrap" - (("/bin/sh") (which "sh"))) - - ;; Don't let autogen.sh run configure with bogus options & CFLAGS. - (substitute* "autogen.sh" - (("^\\./configure.*") "")) - #t)) + (("/bin/sh") (which "sh"))))) (add-after 'install 'separate-python-output ;; Separating one Python script shaves more than 106 MiB from :out. (lambda* (#:key outputs #:allow-other-keys) @@ -2131,8 +2121,7 @@ slabtop, tload, top, vmstat, w, watch and sysctl.") (new (string-append out:python "/" file))) (mkdir-p (dirname new)) (rename-file old new))) - (list "bin/lsusb.py")) - #t)))))) + (list "bin/lsusb.py")))))))) (inputs `(("eudev" ,eudev) ("libusb" ,libusb) @@ -2688,7 +2677,7 @@ Both commands are targeted at system administrators.") (define-public jitterentropy-rngd (package (name "jitterentropy-rngd") - (version "1.2.5") + (version "1.2.6") (source (origin (method git-fetch) @@ -2697,7 +2686,7 @@ Both commands are targeted at system administrators.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "05h9a60s9x3jav33lh50ac1jw8wvbljw2ndrk3k7gs2nlz0kkl14")))) + (base32 "03cbcxkscjcmn6ybkmssq7i39sn5cfsap9fv058pi0k2mr90djwq")))) (build-system gnu-build-system) (arguments `(#:tests? #f ; no test suite @@ -5467,7 +5456,7 @@ and copy/paste text in the console and in xterm.") (define-public btrfs-progs (package (name "btrfs-progs") - (version "5.14.2") + (version "5.15.1") (source (origin (method url-fetch) (uri (string-append "mirror://kernel.org/linux/kernel/" @@ -5475,7 +5464,7 @@ and copy/paste text in the console and in xterm.") "btrfs-progs-v" version ".tar.xz")) (sha256 (base32 - "1afpa8izagkr9sn5fqrm6687idiqdkcz08ks2j07972kd0rm5il5")))) + "085rg9p7kifhh8kjyyhs38y86srwk820s6v07min5gb177rzhc32")))) (build-system gnu-build-system) (outputs '("out" "static")) ; static versions of the binaries in "out" @@ -6629,7 +6618,7 @@ developers.") (define-public radeontop (package (name "radeontop") - (version "1.3") + (version "1.4") (source (origin (method git-fetch) @@ -6638,7 +6627,7 @@ developers.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "0ay6vl9zsz9b2scy0fnsy482pzizj52i27syxwny4z4i9wrk2wmn")))) + (base32 "0kwqddidr45s1blp0h8r8h1dd1p50l516yb6mb4s6zsc827xzgg3")))) (build-system gnu-build-system) (arguments `(#:phases (modify-phases %standard-phases @@ -6648,10 +6637,9 @@ developers.") (lambda _ (substitute* "getver.sh" (("ver=unknown") - (string-append "ver=" ,version))) - #t)) + (string-append "ver=" ,version))))) (delete 'configure)) ; no configure script - #:make-flags (list "CC=gcc" + #:make-flags (list (string-append "CC=" ,(cc-for-target)) (string-append "PREFIX=" %output)) #:tests? #f)) ; no tests (native-inputs @@ -7065,14 +7053,14 @@ re-use code and to avoid re-inventing the wheel.") (define-public libnftnl (package (name "libnftnl") - (version "1.2.0") + (version "1.2.1") (source (origin (method url-fetch) (uri (string-append "mirror://netfilter.org/libnftnl/" "libnftnl-" version ".tar.bz2")) (sha256 - (base32 "1xblq1cbcxhr6qmjpy98i1qdza148idgz99vbhjc7s4vzvfizc4h")))) + (base32 "0z4khm2mnys9mcl8ckwf19cw20jgrv8650nfncy3xcgs2k2aa23m")))) (build-system gnu-build-system) (native-inputs `(("pkg-config" ,pkg-config))) @@ -7089,7 +7077,7 @@ used by nftables.") (define-public nftables (package (name "nftables") - (version "1.0.0") + (version "1.0.1") (source (origin (method url-fetch) @@ -7098,11 +7086,12 @@ used by nftables.") (string-append "https://www.nftables.org/projects/nftables" "/files/nftables-" version ".tar.bz2"))) (sha256 - (base32 "1x25zs2czmn14mmq1nqi4zibsvh04vqjbx5lxj42nylnmxym9gsq")))) + (base32 "08x4xw0s5sap3q7jfr91v7mrkxrydi4dvsckw85ims0qb1ibmviw")))) (build-system gnu-build-system) (arguments `(#:configure-flags '("--disable-man-doc" ; FIXME: needs docbook2x - "--disable-static"))) + "--disable-static" + "--with-cli=readline"))) (inputs `(("gmp" ,gmp) ("libmnl" ,libmnl) ("libnftnl" ,libnftnl) @@ -7291,14 +7280,14 @@ available in the kernel Linux.") (define-public cpuid (package (name "cpuid") - (version "20211031") + (version "20211121") (source (origin (method url-fetch) (uri (string-append "http://www.etallen.com/cpuid/cpuid-" version ".src.tar.gz")) (sha256 (base32 - "13sxb2ar4gypiv0l87lr7hf3qjccwgsg1r92adv9jvrfxcv36pbn")))) + "06n0wrsc1h0r4gbpil0lxvjsfybiyra62bmifzhmvc9ivwm5cbqp")))) (build-system gnu-build-system) (arguments `(#:make-flags @@ -7828,7 +7817,7 @@ compatible with Python's ConfigParser style of .INI files, including RFC (define-public xfsprogs (package (name "xfsprogs") - (version "5.13.0") + (version "5.14.0") (source (origin (method url-fetch) (uri (string-append @@ -7836,11 +7825,13 @@ compatible with Python's ConfigParser style of .INI files, including RFC "xfsprogs-" version ".tar.gz")) (sha256 (base32 - "09s3alwrhs1gaaywkpx2knc5bxb44b77009jw8zgsy9c2wxximns")))) + "1kfglkilc8msgbb1168zj7mxs71pypz9rvl4jhiam5qy786difh8")))) (build-system gnu-build-system) (outputs (list "out" "python")) (arguments `(#:tests? #f ; kernel/user integration tests are in package "xfstests" + #:configure-flags + (list "--disable-static") #:make-flags (list "V=1") #:phases @@ -7862,6 +7853,7 @@ compatible with Python's ConfigParser style of .INI files, including RFC `(("gettext" ,gettext-minimal))) (inputs `(("libinih" ,libinih) + ("liburcu" ,liburcu) ("libuuid" ,util-linux "lib") ("python" ,python-wrapper))) (home-page "https://xfs.wiki.kernel.org/") @@ -7879,6 +7871,9 @@ file systems.") (outputs (list "out")) (arguments (substitute-keyword-arguments (package-arguments xfsprogs) + ((#:configure-flags configure-flags '()) + `(append ,configure-flags + (list "--enable-static"))) ((#:make-flags make-flags ''()) `(cons* "LLDFLAGS=-all-static" ,make-flags)) ((#:phases _ ''()) @@ -8410,14 +8405,14 @@ bindings, and the command-line tool @command{babeltrace2}.") (define-public kexec-tools (package (name "kexec-tools") - (version "2.0.22") + (version "2.0.23") (source (origin (method url-fetch) (uri (string-append "mirror://kernel.org/linux/utils/kernel" "/kexec/kexec-tools-" version ".tar.xz")) (sha256 (base32 - "1hj9mj6x3qs9c8x8mrri9xd3wsg3gwzbab3jfa5ry146xm4pzjcn")))) + "06r44i91g1s9f7k5b9kmvb58j9vrqvysfh32pb70cnyrgmncsqxa")))) (build-system gnu-build-system) (arguments ;; There are no automated tests. @@ -8742,7 +8737,7 @@ kernel side implementation.") (define-public erofs-utils (package (name "erofs-utils") - (version "1.3") + (version "1.4") (source (origin (method git-fetch) @@ -8751,7 +8746,7 @@ kernel side implementation.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "0sqiw05zbxr6l0g9gn3whkc4qc5km2qvfg4lnm08nppwskm8yaw8")))) + (base32 "1ygaw69pfz2hfzw9cqzg9rfnjzrdbfkwsiinz6qs2h56dssjz0y9")))) (build-system gnu-build-system) (inputs `(("lz4" ,lz4) diff --git a/gnu/packages/lisp-xyz.scm b/gnu/packages/lisp-xyz.scm index d44bf80c44..01aa7b0d7a 100644 --- a/gnu/packages/lisp-xyz.scm +++ b/gnu/packages/lisp-xyz.scm @@ -69,6 +69,7 @@ #:use-module (gnu packages file) #:use-module (gnu packages fonts) #:use-module (gnu packages fontutils) + #:use-module (gnu packages game-development) #:use-module (gnu packages gl) #:use-module (gnu packages glib) #:use-module (gnu packages gnome) @@ -3054,31 +3055,32 @@ settings ensure a very simple mode of operation, similar to that provided by (sbcl-package->ecl-package sbcl-cl-json)) (define-public sbcl-unix-opts - (package - (name "sbcl-unix-opts") - (version "0.1.7") - (source - (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/libre-man/unix-opts") - (commit version))) - (file-name (git-file-name "unix-opts" version)) - (sha256 - (base32 - "08djdi1ard09fijb7w9bdmhmwd98b1hzmcnjw9fqjiqa0g3b44rr")))) - (build-system asdf-build-system/sbcl) - (home-page "https://github.com/hankhero/cl-json") - (synopsis "Unix-style command line options parser") - (description - "This is a minimalistic parser of command line options. The main + (let ((commit "0e61f34b2ecf62288437810d4abb31e572048b04") + (revision "1")) + (package + (name "sbcl-unix-opts") + (version (git-version "0.1.7" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/libre-man/unix-opts") + (commit commit))) + (file-name (git-file-name "unix-opts" version)) + (sha256 + (base32 "16mcqpzwrz808p9n3wwl99ckg3hg7yihw08y1i4l7c92aldbkasq")))) + (build-system asdf-build-system/sbcl) + (home-page "https://github.com/hankhero/cl-json") + (synopsis "Unix-style command line options parser") + (description + "This is a minimalistic parser of command line options. The main advantage of the library is the ability to concisely define command line options once and then use this definition for parsing and extraction of command line arguments, as well as printing description of command line options (you get --help for free). This way you don't need to repeat yourself. Also, @command{unix-opts} doesn't depend on anything and precisely controls the behavior of the parser via Common Lisp restarts.") - (license license:expat))) + (license license:expat)))) (define-public cl-unix-opts (sbcl-package->cl-source-package sbcl-unix-opts)) @@ -9081,7 +9083,7 @@ ones.") (define-public sbcl-salza2 (package (name "sbcl-salza2") - (version "2.0.9") + (version "2.1") (source (origin (method git-fetch) @@ -9090,8 +9092,14 @@ ones.") (commit (string-append "release-" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "0p38rj4gq7j5k807php7hrz7l2zyyfshv8i9yms7i8lkgg3433ki")))) + (base32 "1p48lxdibnps5rpyh5cmnk0vc77bmmxb32qdzfz93zadr8wwas10")))) (build-system asdf-build-system/sbcl) + (native-inputs + `(("chipz" ,sbcl-chipz) + ("flexi-streams" ,sbcl-flexi-streams) + ("parachute" ,sbcl-parachute))) + (inputs + `(("trivial-gray-streams" ,sbcl-trivial-gray-streams))) (synopsis "Common Lisp library for zlib, deflate and gzip compression") (description "Salza2 is a Common Lisp library for creating compressed data in the zlib, @@ -9362,30 +9370,31 @@ generation functions from the GSL library.") (sbcl-package->ecl-package sbcl-cl-randist)) (define-public sbcl-float-features - (package - (name "sbcl-float-features") - (version "1.0.0") - (source - (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/Shinmera/float-features") - (commit "d3ef60181635b0849aa28cfc238053b7ca4644b0"))) - (file-name (git-file-name name version)) - (sha256 - (base32 - "0yj419k7n59x6rh3grwr6frgwwyria2il6f7wxpfazm8cskv4lzr")))) - (build-system asdf-build-system/sbcl) - (synopsis "Common Lisp IEEE float portability library") - (description - "Portability library for IEEE float features that are not + (let ((commit "c1f86aea91cfaa3aa59799162be23ef8a12b199d") + (revision "2")) + (package + (name "sbcl-float-features") + (version (git-version "1.0.0" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/Shinmera/float-features") + (commit commit))) + (file-name (git-file-name "float-features" version)) + (sha256 + (base32 "0vqm9xhn2i4vbjrxnp4hr1l3lydjflhjykdz6cmqg2j48c5kh3g3")))) + (build-system asdf-build-system/sbcl) + (synopsis "Common Lisp IEEE float portability library") + (description + "Portability library for IEEE float features that are not covered by the Common Lisp standard.") - (home-page "https://github.com/Shinmera/float-features") - (license license:zlib) - (inputs - `(("documentation-utils" ,sbcl-documentation-utils))) - (arguments - `(#:tests? #f)))) + (home-page "https://github.com/Shinmera/float-features") + (license license:zlib) + (inputs + `(("documentation-utils" ,sbcl-documentation-utils))) + (arguments + `(#:tests? #f))))) (define-public cl-float-features (sbcl-package->cl-source-package sbcl-float-features)) @@ -10612,10 +10621,10 @@ MOP easier to use.") (sbcl-package->cl-source-package sbcl-moptilities)) (define-public sbcl-osicat - (let ((commit "de0c18a367eedc857e1902a7319828af072a0d97")) + (let ((commit "eab6b8cabd71b59e894b51dc555e171683ec3387")) (package (name "sbcl-osicat") - (version (git-version "0.7.0" "1" commit)) + (version (git-version "0.7.0" "2" commit)) (home-page "http://www.common-lisp.net/project/osicat/") (source (origin @@ -10625,7 +10634,7 @@ MOP easier to use.") (commit commit))) (file-name (git-file-name name version)) (sha256 - (base32 "15viw5pi5sa7qq9b4n2rr3dj2jkqr180rh9z1lh8w3rgl42i2adc")))) + (base32 "18g137iqf86i247c9cg7d86b8k9cfq3yv272l73fsv734qpnv0g9")))) (build-system asdf-build-system/sbcl) (inputs `(("alexandria" ,sbcl-alexandria) @@ -14822,8 +14831,8 @@ HTML documents.") (sbcl-package->cl-source-package sbcl-cl-html-diff)) (define-public sbcl-tooter - (let ((commit "b1639d8a58dfe8020c82ed36697b7a668ef41a09") - (revision "2")) + (let ((commit "ec97bee3431c55913078e532daae81eb0fd90372") + (revision "3")) (package (name "sbcl-tooter") (version (git-version "1.0.0" revision commit)) @@ -14835,7 +14844,7 @@ HTML documents.") (commit commit))) (file-name (git-file-name "tooter" version)) (sha256 - (base32 "0842lbj9ml6qxdm5xvhdbm87wyrvrq7bxawa6i8wk80n8lnvmhdw")))) + (base32 "02vpjaq38d6laaqmsana9f13c38xzr0xwy05fcfkmzdhh0kllpkv")))) (build-system asdf-build-system/sbcl) (inputs `(("sbcl-cl-ppcre" ,sbcl-cl-ppcre) @@ -14856,8 +14865,8 @@ protocol for Mastodon.") (sbcl-package->cl-source-package sbcl-tooter)) (define-public sbcl-croatoan - (let ((commit "a577951d8dd607f828d6efb3290b4e8ac9f1e654") - (revision "3")) + (let ((commit "cf875137a23ed4efbfde63e52691f1b544d55d17") + (revision "4")) (package (name "sbcl-croatoan") (version (git-version "0.0.1" revision commit)) @@ -14869,7 +14878,7 @@ protocol for Mastodon.") (commit commit))) (file-name (git-file-name "croatoan" version)) (sha256 - (base32 "1y7a13mzy0cz19pw0xvqwca1s7frfaqryaqwl1mrq7iz84sw0fcw")))) + (base32 "0dvp8irimlnnvz2m4lnmxp19xbam1yfri3d1i9qqml968i08xcwb")))) (build-system asdf-build-system/sbcl) (arguments '(#:phases @@ -14998,11 +15007,11 @@ dynamically.") (sbcl-package->cl-source-package sbcl-sxql-composer)) (define-public sbcl-cl-i18n - (let ((commit "fa0aa5bef8dfbdf2d72f7cc9f49e848ccbb567aa") + (let ((commit "4216fe9fc7b54033c0d881dbb835b7af786365ed") (revision "1")) (package (name "sbcl-cl-i18n") - (version (git-version "0.5.0" revision commit)) + (version (git-version "0.5.1" revision commit)) (source (origin (method git-fetch) @@ -15011,7 +15020,7 @@ dynamically.") (commit commit))) (file-name (git-file-name "cl-i18n" version)) (sha256 - (base32 "1hpsdbb3hd79bzbrnbqgk2j3f0ispxvk91snp08fm2z3f1sds5as")))) + (base32 "1mdhfkk61djj39vgnns5y1cssd12h0m1cfwd21m8xpa2l3rqvmgf")))) (build-system asdf-build-system/sbcl) (inputs `(("alexandria" ,sbcl-alexandria) @@ -15660,30 +15669,32 @@ abstract, final and singleton classes.") (sbcl-package->cl-source-package sbcl-abstract-classes)) (define-public sbcl-coalton - (let ((commit "4a42ffb4222fde3abfd1b50d96e455ff2eef9fe8") - (revision "1")) + (let ((commit "012f6c8db6d73df16f7729090a12a929fb82db17") + (revision "2")) (package (name "sbcl-coalton") - (version (git-version "0.0.0" revision commit)) + (version (git-version "0.0.1" revision commit)) (source (origin (method git-fetch) (uri (git-reference - (url "https://github.com/stylewarning/coalton") + (url "https://github.com/coalton-lang/coalton") (commit commit))) (file-name (git-file-name "coalton" version)) (sha256 - (base32 "0aidwwam7cnhb3p9212zbv5w2dl6kr5iklzanypzr1a9lqaxwdlk")))) + (base32 "1j3d12vyyn7y9nz2an4xmaa5si0jbxbwq7y61hq2b7vk376zvw18")))) (build-system asdf-build-system/sbcl) (native-inputs `(("fiasco" ,sbcl-fiasco))) (inputs - `(("abstract-classes" ,sbcl-abstract-classes) - ("alexandria" ,sbcl-alexandria) + `(("alexandria" ,sbcl-alexandria) + ("float-features" ,sbcl-float-features) + ("fset" ,sbcl-fset) ("global-vars" ,sbcl-global-vars) - ("optima" ,sbcl-optima) - ("trivial-garbage" ,sbcl-trivial-garbage))) - (home-page "https://github.com/stylewarning/coalton") + ("json-streams" ,sbcl-json-streams) + ("serapeum" ,sbcl-serapeum) + ("trivia" ,sbcl-trivia))) + (home-page "https://coalton-lang.github.io") (synopsis "Dialect of ML in Common Lisp") (description "Coalton is a dialect of ML embedded in Common Lisp. It emphasizes @@ -17721,6 +17732,51 @@ fit together as required by any particular game.") (define-public cl-trial (sbcl-package->cl-source-package sbcl-trial)) +(define-public sbcl-cl-liballegro + (let ((commit "49f632ce97fc4f835bf5d450588793234b980a64") + (revision "1")) + (package + (name "sbcl-cl-liballegro") + (version (git-version "0.2.15" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/resttime/cl-liballegro") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0brbr7i342s0gadlnzd3a61w2b9ihhx60l19ararnc2asvyhmz7x")))) + (build-system asdf-build-system/sbcl) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-allegro-lib-path + (lambda* (#:key inputs #:allow-other-keys) + (let ((allegro-lib-path (string-append + (assoc-ref inputs "allegro") "/lib/"))) + (substitute* "src/library.lisp" + (("lib \".so\"" all) + (string-append "\"" allegro-lib-path "\"" " lib \".so\""))))))))) + (inputs + `(("allegro" ,allegro) + ("cffi" ,sbcl-cffi) + ("float-features" ,sbcl-float-features) + ("trivial-garbage" ,sbcl-trivial-garbage) + ("trivial-main-thread" ,sbcl-trivial-main-thread))) + (home-page "https://github.com/resttime/cl-liballegro") + (synopsis "Allegro 5 game programming library bindings for Common Lisp") + (description + "This package provides CFFI bindings and interface to Allegro 5 game +developing library for Common Lisp.") + (license license:zlib)))) + +(define-public ecl-cl-liballegro + (sbcl-package->ecl-package sbcl-cl-liballegro)) + +(define-public cl-liballegro + (sbcl-package->cl-source-package sbcl-cl-liballegro)) + (define-public sbcl-alloy (let ((commit "e86e22c2887836ec31cd97e039f0bca5248d8f1c") (revision "1")) @@ -17882,11 +17938,11 @@ functions allow Lisp programs to explore the web.") (sbcl-package->cl-source-package sbcl-aserve)) (define-public sbcl-yxorp - (let ((commit "041d0a535d6406df703f5f037d3d2cad4159c74d") - (revision "2")) + (let ((commit "c306898a467995e123a22316c9b79fcac442415b") + (revision "4")) (package (name "sbcl-yxorp") - (version (git-version "0.2" revision commit)) + (version (git-version "0.4" revision commit)) (source (origin (method git-fetch) @@ -17895,14 +17951,18 @@ functions allow Lisp programs to explore the web.") (commit commit))) (file-name (git-file-name "cl-yxorp" version)) (sha256 - (base32 "14fvncisig6h2qamczbx9cifp3rbjfw0cmc2ffifvr82x2bwab1f")))) + (base32 "0ll1s9w29yhhgqssgiw58fcapw4n040gkvpz4sxwv3q2v60rbidj")))) (build-system asdf-build-system/sbcl) (inputs - `(("cl+ssl" ,sbcl-cl+ssl) + `(("chipz" ,sbcl-chipz) + ("chunga" ,sbcl-chunga) + ("cl+ssl" ,sbcl-cl+ssl) ("cl-binding-arrows" ,sbcl-binding-arrows) ("cl-str" ,sbcl-cl-str) ("cl-usocket" ,sbcl-usocket) ("flexi-streams" ,sbcl-flexi-streams) + ("rutils" ,sbcl-rutils) + ("salza2" ,sbcl-salza2) ("trivial-garbage" ,sbcl-trivial-garbage))) (home-page "https://github.com/charje/cl-yxorp") (synopsis @@ -18618,7 +18678,7 @@ tasks in Common Lisp. It is fork of SWANK-BACKEND.") (home-page "https://github.com/eudoxia0/terminal-size") (synopsis "Get the size of the terminal from Common Lisp") (description - "This package provides the @{(terminal-size:size)} function to get the + "This package provides the @code{terminal-size:size} function to get the size of the terminal from Common Lisp.") (license license:expat)))) @@ -19707,6 +19767,92 @@ score. When evaluated, the musical score is rendered to an image.") (define-public ecl-cmn (sbcl-package->ecl-package sbcl-cmn)) +(define-public sbcl-data-sift + (let ((commit "fd617d8200cdcc1b87ecf45ab59bb38e8b16ef7e") + (revision "1")) + (package + (name "sbcl-data-sift") + (version (git-version "0.0.0" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/archimag/data-sift") + (commit commit))) + (file-name (git-file-name "cl-data-sift" version)) + (sha256 + (base32 "1v7gf0x4ibjzp0c56n9m77hxdgwcm9356zlk5n4l3fx4i0hj6146")))) + (build-system asdf-build-system/sbcl) + (arguments + ;; All test cases test a function that has been removed. + `(#:tests? #f)) + (inputs + `(("alexandria" ,sbcl-alexandria) + ("cl-ppcre" ,sbcl-cl-ppcre) + ("parse-number" ,sbcl-parse-number) + ("puri" ,sbcl-puri))) + (native-inputs + `(("lift" ,sbcl-lift))) + (home-page "https://github.com/archimag/data-sift") + (synopsis + "Common Lisp library for validation and transformation of string data") + (description + "@code{DATA-SIFT} is a Common Lisp data validation and transformation +library inspired by @code{cl-data-format-validation} and WTForms validators.") + (license license:llgpl)))) + +(define-public cl-data-sift + (sbcl-package->cl-source-package sbcl-data-sift)) + +(define-public ecl-data-sift + (sbcl-package->ecl-package sbcl-data-sift)) + +(define-public sbcl-restas + (let ((commit "81bbbab6b36f81f846f78e71232e9d3d15f6d952") + (revision "1")) + (package + (name "sbcl-restas") + (version (git-version "0.1.4" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/archimag/restas") + (commit commit))) + (file-name (git-file-name "cl-restas" version)) + (sha256 + (base32 "00ng6jik1lwjw3bbxhijy8s0ml24lgm73liwrr01gcsb0r6wrjjn")))) + (build-system asdf-build-system/sbcl) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'fix-paths + (lambda* (#:key inputs #:allow-other-keys) + (substitute* "contrib/restas-daemon.lisp" + (("/lib64/") "") + (("/lib/") "") + (("libcap.so") + (string-append (assoc-ref inputs "libcap") + "/lib/libcap.so")))))))) + (inputs + `(("alexandria" ,sbcl-alexandria) + ("bordeaux-threads" ,sbcl-bordeaux-threads) + ("cffi" ,sbcl-cffi) + ("data-sift" ,sbcl-data-sift) + ("hunchentoot" ,sbcl-hunchentoot) + ("libcap" ,libcap) + ("routes" ,sbcl-routes))) + (home-page "https://github.com/archimag/restas") + (synopsis "Common Lisp web framework") + (description "@code{RESTAS} is a Common Lisp web application framework.") + (license license:llgpl)))) + +(define-public cl-restas + (sbcl-package->cl-source-package sbcl-restas)) + +(define-public ecl-restas + (sbcl-package->ecl-package sbcl-restas)) + (define-public sbcl-cl-https-everywhere ;; No release. ;; Don't forget to update the https-everywhere input. diff --git a/gnu/packages/lisp.scm b/gnu/packages/lisp.scm index 6a235736f9..983255e0c5 100644 --- a/gnu/packages/lisp.scm +++ b/gnu/packages/lisp.scm @@ -1175,7 +1175,7 @@ including a built-in database engine and a GUI system.") (define-public janet (package (name "janet") - (version "1.18.1") + (version "1.19.0") (source (origin (method git-fetch) @@ -1184,7 +1184,7 @@ including a built-in database engine and a GUI system.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "07k92ip4vmqpzbz32spkpy2rz7pxfsdyl77sy9fylqmc6vg32hr8")))) + (base32 "1gpwhgnkwxjp95gs3i5dcdpsmv1pa7a299m8hccyy92jxd15pym6")))) (build-system gnu-build-system) (arguments `(#:make-flags diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index 2dcfa0516f..ba54e72d12 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -376,11 +376,16 @@ algorithm.") (assoc-ref %build-inputs "boost"))) #:phases (modify-phases %standard-phases - (add-before - 'configure 'set-CXXFLAGS - (lambda _ - (setenv "CXXFLAGS" "-fpermissive ") - #t))))) + (add-after 'unpack 'fix-compatibility-errors + (lambda _ + (substitute* "src/library/IAM2WayImportance.h" + (("= std::make_pair.*") + "= std::minmax(varID1, varID2);")) + (substitute* "src/library/DataFrame.h" + (("isFirst\\?.*") + "if (isFirst) { isFirst = false; } else { os << par.delimiter; }\n")))) + (add-before 'configure 'set-CXXFLAGS + (lambda _ (setenv "CXXFLAGS" "-fpermissive ")))))) (inputs `(("boost" ,boost) ("gsl" ,gsl) diff --git a/gnu/packages/mail.scm b/gnu/packages/mail.scm index 0ee57f956d..8fc9446300 100644 --- a/gnu/packages/mail.scm +++ b/gnu/packages/mail.scm @@ -28,7 +28,7 @@ ;;; Copyright © 2018 Alex Vong <alexvong1995@gmail.com> ;;; Copyright © 2018 Gábor Boskovits <boskovits@gmail.com> ;;; Copyright © 2018, 2019, 2020, 2021 Ricardo Wurmus <rekado@elephly.net> -;;; Copyright © 2019, 2020 Tanguy Le Carrour <tanguy@bioneland.org> +;;; Copyright © 2019, 2020, 2021 Tanguy Le Carrour <tanguy@bioneland.org> ;;; Copyright © 2020 Vincent Legoll <vincent.legoll@gmail.com> ;;; Copyright © 2020 Justus Winter <justus@sequoia-pgp.org> ;;; Copyright © 2020 Eric Brown <ecbrown@ericcbrown.com> @@ -108,6 +108,7 @@ #:use-module (gnu packages language) #:use-module (gnu packages libcanberra) #:use-module (gnu packages libevent) + #:use-module (gnu packages libffi) #:use-module (gnu packages libidn) #:use-module (gnu packages libunistring) #:use-module (gnu packages libunwind) @@ -1240,7 +1241,7 @@ attachments, create new maildirs, and so on.") (define-public alot (package (name "alot") - (version "0.9.1") + (version "0.10") (source (origin (method git-fetch) ;; package author intends on distributing via github rather @@ -1252,7 +1253,7 @@ attachments, create new maildirs, and so on.") (file-name (git-file-name name version)) (sha256 (base32 - "0s94m17yph1gq9f2svipb3bbwbw1s4j3zf2xkg5h91006v8286r6")))) + "0awf1phdy1wqm01cy9zmvqlw6c8pvkxm2f9ncjd0cmzxqnmq1dyn")))) (build-system python-build-system) (arguments `(#:phases @@ -1288,7 +1289,7 @@ attachments, create new maildirs, and so on.") ("python-urwid" ,python-urwid) ("python-urwidtrees" ,python-urwidtrees) ("python-gpg" ,python-gpg) - ("python-notmuch" ,python-notmuch))) + ("python-notmuch2" ,python-notmuch2))) (home-page "https://github.com/pazz/alot") (synopsis "Command-line MUA using Notmuch") (description @@ -1350,14 +1351,14 @@ invoking @command{notifymuch} from the post-new hook.") (define-public notmuch (package (name "notmuch") - (version "0.33.2") + (version "0.34.1") (source (origin (method url-fetch) (uri (string-append "https://notmuchmail.org/releases/notmuch-" version ".tar.xz")) (sha256 (base32 - "1bic1f2va136aygfy53bsgziwiidcpb7qf1v05mlza2jmgv94j14")))) + "05nq64gp8vnrwrl22d60v7ixgdhm9339ajhcdfkq0ll1qiycyyj5")))) (build-system gnu-build-system) (arguments `(#:make-flags @@ -1512,6 +1513,21 @@ and search library.") (define-public python2-notmuch (package-with-python2 python-notmuch)) +(define-public python-notmuch2 + (package + (inherit python-notmuch) + (name "python-notmuch2") + (propagated-inputs `(("python-cffi" ,python-cffi))) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; This python package lives in a subdirectory of the notmuch source + ;; tree, so chdir into it before building. + (add-after 'unpack 'enter-python-dir + (lambda _ (chdir "bindings/python-cffi")))))) + (synopsis "Pythonic bindings for the notmuch mail database using CFFI") + (license license:gpl3+))) + (define-public muchsync (package (name "muchsync") @@ -3940,13 +3956,13 @@ servers. The 4rev1 and 4 versions of IMAP are supported.") (define-public urlscan (package (name "urlscan") - (version "0.9.6") + (version "0.9.7") (source (origin (method url-fetch) (uri (pypi-uri "urlscan" version)) (sha256 - (base32 "09lxi7dhn49fpb3ij4cgrhj3qqqqs9rcxbjb7p9smw5wblrqpzga")))) + (base32 "0sqaplcrz0lj40x20s2mv3gkzsmawpi9h2kx0rmk342k5240il81")))) (build-system python-build-system) (propagated-inputs `(("python-urwid" ,python-urwid))) diff --git a/gnu/packages/mastodon.scm b/gnu/packages/mastodon.scm index 31589909bf..0c759b1c01 100644 --- a/gnu/packages/mastodon.scm +++ b/gnu/packages/mastodon.scm @@ -40,21 +40,22 @@ (define-public toot (package (name "toot") - (version "0.27.0") + (version "0.28.0") (source (origin (method url-fetch) (uri (pypi-uri "toot" version)) (sha256 - (base32 "1mfbqmgna7046d134pc5qx1vyfd60vwcn0xr9lxzlmc5rjdbmz8x")))) + (base32 "1wsj4160z3m1nvswgkl08n9ymihxhxdvxvrsycn9d3y5fplm00k9")))) (build-system python-build-system) (arguments '(#:phases (modify-phases %standard-phases (replace 'check - (lambda* (#:key inputs outputs #:allow-other-keys) - (add-installed-pythonpath inputs outputs) - (invoke "py.test")))))) + (lambda* (#:key tests? inputs outputs #:allow-other-keys) + (when tests? + (add-installed-pythonpath inputs outputs) + (invoke "py.test"))))))) (native-inputs `(("python-pytest" ,python-pytest))) (inputs diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index b04001b594..ea374a4f4c 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -2410,10 +2410,9 @@ satisfiability checking (SAT).") (add-before 'configure 'set-library-directory (lambda _ ;; Install libraries to lib/, not lib64/. - (substitute* "internal/ceres/CMakeLists.txt" + (substitute* "CMakeLists.txt" (("set\\(LIB_SUFFIX \"64\"\\)") - "set(LIB_SUFFIX \"\")")) - #t))))) + "set(LIB_SUFFIX \"\")"))))))) (native-inputs `(("pkg-config" ,pkg-config))) (propagated-inputs diff --git a/gnu/packages/mes.scm b/gnu/packages/mes.scm index 0251dbf02f..07e63384ff 100644 --- a/gnu/packages/mes.scm +++ b/gnu/packages/mes.scm @@ -4,6 +4,7 @@ ;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2020, 2021 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2021 Xinglu Chen <public@yoctocell.xyz> +;;; Copyright © 2021 Arun Isaac <arunisaac@systemreboot.net> ;;; ;;; This file is part of GNU Guix. ;;; @@ -97,14 +98,14 @@ extensive examples, including parsers for the Javascript and C99 languages.") (define-public nyacc (package (inherit nyacc-0.99) - (version "1.04.0") + (version "1.05.1") (source (origin (method url-fetch) (uri (string-append "mirror://savannah/nyacc/nyacc-" version ".tar.gz")) (sha256 (base32 - "0m3mcdaslvvr2iav8ga146hzsja2hdj4656pszljb4q2q7h25ip5")) + "1ck3gyzln5dhamp317nv3waych12mczj05dm4wdblij6ab0l4863")) (modules '((guix build utils))) (snippet '(begin diff --git a/gnu/packages/messaging.scm b/gnu/packages/messaging.scm index 825d2b0828..48cd994511 100644 --- a/gnu/packages/messaging.scm +++ b/gnu/packages/messaging.scm @@ -2515,13 +2515,13 @@ QMatrixClient project.") (define-public hangups (package (name "hangups") - (version "0.4.14") + (version "0.4.15") (source (origin (method url-fetch) (uri (pypi-uri "hangups" version)) (sha256 - (base32 "15qbbafcrdkx73xz9y30qa3d8nj6mgrp2m41749i5nn1qywmikk8")))) + (base32 "1fa58m6zgvsawp2h1maj82wn6lpdllhbficmcjm78n5bg1hv7f4m")))) (build-system python-build-system) (arguments `(#:phases @@ -2531,13 +2531,11 @@ QMatrixClient project.") (lambda _ (substitute* "setup.py" (("==") ">=") - ((",<.*'") "'")) - #t)) + ((",<.*'") "'")))) (replace 'check (lambda* (#:key tests? #:allow-other-keys) (when tests? - (invoke "pytest" "hangups")) - #t))))) + (invoke "pytest" "hangups"))))))) (propagated-inputs `(("python-aiohttp" ,python-aiohttp) ("python-appdirs" ,python-appdirs) @@ -2780,6 +2778,41 @@ asynchronicity.") (home-page "https://github.com/gkdr/lurch") (license license:gpl3+))) +(define-public libphonenumber + (package + (name "libphonenumber") + (version "8.11.3") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/google/libphonenumber") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "06y3mh1d1mks6d0ynxp3980g712nkf8l5nyljpybsk326b246hg9")))) + (arguments + `(#:test-target "tests" + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'change-directory + (lambda _ (chdir "cpp")))))) + (build-system cmake-build-system) + (native-inputs + `(("googletest" ,googletest) + ("pkg-config" ,pkg-config))) + (inputs + `(("boost" ,boost) + ("protobuf" ,protobuf) + ("icu4c" ,icu4c))) + (synopsis "Library for parsing and using phone numbers") + (description + "This package provides a C++ library for parsing, formatting, and +validating international phone numbers.") + (home-page "https://github.com/google/libphonenumber") + (license license:asl2.0))) + + (define-public chatty (package (name "chatty") diff --git a/gnu/packages/mpd.scm b/gnu/packages/mpd.scm index de5a7d34e7..ea41f9e97e 100644 --- a/gnu/packages/mpd.scm +++ b/gnu/packages/mpd.scm @@ -76,7 +76,7 @@ (define-public libmpdclient (package (name "libmpdclient") - (version "2.19") + (version "2.20") (source (origin (method url-fetch) (uri @@ -85,7 +85,7 @@ "/libmpdclient-" version ".tar.xz")) (sha256 (base32 - "12d1fzlkcnjw4ayk2wp11vhglfcvr5k02arzdbkhiavq496av2hm")))) + "0z979qcjc0dqmpn3q9j174a29akx3zmavz6q6hg31hrrx5l3yy8q")))) (build-system meson-build-system) (native-inputs `(("pkg-config" ,pkg-config) diff --git a/gnu/packages/mpi.scm b/gnu/packages/mpi.scm index b91afc2067..0398e28eff 100644 --- a/gnu/packages/mpi.scm +++ b/gnu/packages/mpi.scm @@ -7,7 +7,7 @@ ;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2018–2021 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2018 Paul Garlick <pgarlick@tourbillion-technology.com> -;;; Copyright © 2019 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2019, 2021 Ricardo Wurmus <rekado@elephly.net> ;;; ;;; This file is part of GNU Guix. ;;; @@ -309,6 +309,16 @@ software vendors, application developers and computer science researchers.") ;; See file://LICENSE (license license:bsd-2))) +(define-public openmpi-c++ + (package/inherit openmpi + (name "openmpi-c++") + (outputs '("out")) + (arguments + (substitute-keyword-arguments (package-arguments openmpi) + ((#:configure-flags flags) + `(cons "--enable-mpi-cxx" ,flags)))) + (synopsis "C++ bindings for MPI"))) + ;; TODO: javadoc files contain timestamps. (define-public java-openmpi (package/inherit openmpi diff --git a/gnu/packages/networking.scm b/gnu/packages/networking.scm index 1806fd867b..f351dfe095 100644 --- a/gnu/packages/networking.scm +++ b/gnu/packages/networking.scm @@ -14,7 +14,7 @@ ;;; Copyright © 2016, 2017 Pjotr Prins <pjotr.guix@thebird.nl> ;;; Copyright © 2017 Mathieu Othacehe <m.othacehe@gmail.com> ;;; Copyright © 2017, 2020, 2021 Leo Famulari <leo@famulari.name> -;;; Copyright © 2017, 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2017, 2018, 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2017, 2018, 2019 Rutger Helling <rhelling@mykolab.com> ;;; Copyright © 2017, 2019 Gábor Boskovits <boskovits@gmail.com> ;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be> @@ -1248,14 +1248,14 @@ receiving NDP messages.") (define-public ethtool (package (name "ethtool") - (version "5.14") + (version "5.15") (source (origin (method url-fetch) (uri (string-append "mirror://kernel.org/software/network/" "ethtool/ethtool-" version ".tar.xz")) (sha256 (base32 - "11kns8imm55i0miggsnv9nblnzm60zgnanxnjajdgb2wj68xn4xv")))) + "0v8i592vwjypf111w0lfvaxdwhzybp6w600g28m9rm490c8xcvv8")))) (build-system gnu-build-system) (native-inputs `(("pkg-config" ,pkg-config))) @@ -1775,14 +1775,14 @@ TCP connection, TLS handshake and so on) in the terminal.") (define-public squid (package (name "squid") - (version "4.16") + (version "4.17") (source (origin (method url-fetch) (uri (string-append "http://www.squid-cache.org/Versions/v4/squid-" version ".tar.xz")) (sha256 - (base32 "0qxswdv90lmbxpb47hnqhjv32q0c8j7qkja6wpd0473wfn8yh03y")))) + (base32 "060lwghn6q982bay11ia38c86kd8w6mjgy68n58v31kwik08m4nb")))) (build-system gnu-build-system) (arguments '(#:configure-flags @@ -3059,18 +3059,17 @@ eight bytes) tools ;; Either BSD-3 or GPL-2 can be used. (license (list license:bsd-3 license:gpl2)))) -;;; This is an old version required by rested. -(define-public asio-1.12 +(define-public asio (package (name "asio") - (version "1.12.2") + (version "1.20.0") (source (origin (method url-fetch) (uri (string-append "mirror://sourceforge/asio/asio/" version " (Stable)/asio-" version ".tar.bz2")) (sha256 - (base32 "1akray4l3hgahmb92sbvsqg128c7g7s92jrkf1sp1fjnfjrxq9sf")))) + (base32 "0335kyxdnwnp96sh9p3jq1s87qnfmp5l7hzlcdxbbwfzrb9p8hr0")))) (build-system gnu-build-system) (inputs `(("boost" ,boost) @@ -3087,53 +3086,37 @@ low-level I/O programming that provides developers with a consistent asynchronous model using a modern C++ approach.") (license license:boost1.0))) -(define-public asio +(define-public shadowsocks (package - (inherit asio-1.12) - (version "1.18.2") + (name "shadowsocks") + (version "2.9.1") (source (origin - (method url-fetch) - (uri (string-append "mirror://sourceforge/asio/asio/" - version " (Stable)/asio-" version ".tar.bz2")) + (method git-fetch) + (uri (git-reference + (url "https://github.com/shadowsocks/shadowsocks") + (commit version))) (sha256 - (base32 "1wpr4ymv63a192fmymwyxd7v0bv575v022gz53y0mcflhr2mvh1s")))))) - -(define-public shadowsocks - ;; There are some security fixes after the last release. - (let* ((commit "e332ec93e9c90f1cbee676b022bf2c5d5b7b1239") - (revision "0") - (version (git-version "2.8.2" revision commit))) - (package - (name "shadowsocks") - (version version) - (home-page "https://github.com/shadowsocks/shadowsocks") - (source (origin - (method git-fetch) - (uri (git-reference - (url home-page) - (commit commit))) - (sha256 - (base32 - "1idd9b4f2pnhcpk1bh030hqg5zq25gkwxd53xi3c0cj242w7sp2j")) - (file-name (git-file-name name version)))) - (inputs - `(("openssl" ,openssl))) - (arguments - '(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'patch-crypto-paths - (lambda* (#:key inputs #:allow-other-keys) - (substitute* "shadowsocks/shell.py" - (("config\\.get\\('libopenssl', None\\)") - (format #f "config.get('libopenssl', ~s)" - (string-append - (assoc-ref inputs "openssl") - "/lib/libssl.so"))))))))) - (build-system python-build-system) - (synopsis "Fast tunnel proxy that helps you bypass firewalls") - (description - "This package is a fast tunnel proxy that helps you bypass firewalls. + (base32 "02mp5905nz02d7amb4zc77rcrkxmvy8mf5rci7mvy58g24lvbw25")) + (file-name (git-file-name name version)))) + (inputs + `(("openssl" ,openssl))) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-crypto-paths + (lambda* (#:key inputs #:allow-other-keys) + (substitute* "shadowsocks/shell.py" + (("config\\.get\\('libopenssl', None\\)") + (format #f "config.get('libopenssl', ~s)" + (string-append + (assoc-ref inputs "openssl") + "/lib/libssl.so"))))))))) + (build-system python-build-system) + (home-page "https://github.com/shadowsocks/shadowsocks") + (synopsis "Fast tunnel proxy that helps you bypass firewalls") + (description + "This package is a fast tunnel proxy that helps you bypass firewalls. Features: @itemize @@ -3143,7 +3126,7 @@ Features: @item Workers and graceful restart @item Destination IP blacklist @end itemize") - (license license:asl2.0)))) + (license license:asl2.0))) (define-public net-snmp (package @@ -3366,7 +3349,7 @@ never see any machines other than the one Dante is running on.") (define-public restbed (package (name "restbed") - (version "4.7") + (version "4.8") (source (origin (method git-fetch) @@ -3375,19 +3358,15 @@ never see any machines other than the one Dante is running on.") (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "055qicb773a599dsqbcz5xf0xj1wpk33mdrkyi0fsmyjmn8d2p9d")))) + (base32 "15j09x36i6zj6innl0w1mfzlc56qmjwrs82my8dsagqa2ikd08ya")))) (build-system cmake-build-system) (inputs - `(("asio" ,asio-1.12) + `(("asio" ,asio) ("catch" ,catch-framework) ("openssl" ,openssl))) (arguments - `(#:tests? #f - #:configure-flags - '("-DBUILD_TESTS=NO" - "-DBUILD_EXAMPLES=NO" - "-DBUILD_SSL=NO" - "-DBUILD_SHARED=NO") + `(#:configure-flags + '("-DBUILD_SSL=NO") #:phases (modify-phases %standard-phases (add-after 'unpack 'apply-patches-and-fix-paths @@ -3709,14 +3688,14 @@ written (and providing API) in C. Current implementation covers YANG 1.0 (RFC (define-public batctl (package (name "batctl") - (version "2021.3") + (version "2021.4") (source (origin (method url-fetch) (uri (string-append "https://downloads.open-mesh.org/batman/releases/batman-adv-" version "/batctl-" version ".tar.gz")) (sha256 - (base32 "087w8xxxpqxs5cz4aj4l9wzbh0ga8163nh7qy44ld2lgqbplnbzj")))) + (base32 "1ryqz90av2p5pgmmpi1afmycd18zhpwz1i4f7r0s359jis86xndn")))) (inputs `(("libnl" ,libnl))) (native-inputs @@ -4004,14 +3983,14 @@ thousands of connections is clearly realistic with today's hardware.") (define-public lldpd (package (name "lldpd") - (version "1.0.12") + (version "1.0.13") (source (origin (method url-fetch) (uri (string-append "https://media.luffy.cx/files/lldpd/lldpd-" version ".tar.gz")) (sha256 - (base32 "1wfs50b0694dm60ryjfmxgkxxsqpp9sxqbc4laad364wbddwd56i")) + (base32 "00a7v24qhxw80yk2v79wrkfn7br4r8pcajyrpz8j0xx2v1zq4ffn")) (modules '((guix build utils))) (snippet '(begin @@ -4122,7 +4101,7 @@ network.") (define-public yggdrasil (package (name "yggdrasil") - (version "0.3.16") + (version "0.4.1") (source (origin (method git-fetch) @@ -4133,7 +4112,7 @@ network.") (recursive? #t))) (file-name (git-file-name name version)) (sha256 - (base32 "0vyd7a333hwn6j1lv1g9sicw74a4qk982bsi3cfdhjlv6hsjwmil")) + (base32 "1ajhn0z58ap9jldip7mqj78drmgg4645zfsxsy004cfkm60fasnx")) (patches (search-patches "yggdrasil-extra-config.patch")))) (build-system go-build-system) (arguments @@ -4141,50 +4120,58 @@ network.") ;; TODO: figure out how tests are run #:tests? #f #:install-source? #f - #:phases (modify-phases %standard-phases - (replace 'build - (lambda _ - (for-each - (lambda (c) - (invoke - "go" "build" "-v" "-ldflags=-s -w" - (string-append - "github.com/yggdrasil-network/yggdrasil-go/cmd/" c))) - (list "yggdrasil" "yggdrasilctl")) - #t)) - (replace 'install - (lambda* (#:key outputs #:allow-other-keys) - (let* ((out (assoc-ref outputs "out")) - (bin (string-append out "/bin/")) - (doc (string-append out "/share/doc/yggdrasil/"))) - (mkdir-p bin) - (for-each - (lambda (f) - (install-file f bin)) - (list "yggdrasil" "yggdrasilctl")) - (mkdir-p doc) - (copy-recursively - (string-append - "src/github.com/yggdrasil-network/yggdrasil-go/" - "doc/yggdrasil-network.github.io") - doc)) - #t))))) + #:phases + (modify-phases %standard-phases + (replace 'build + (lambda* (#:key import-path build-flags #:allow-other-keys) + (for-each + (lambda (directory) + ((assoc-ref %standard-phases 'build) + #:build-flags build-flags + #:import-path directory)) + (list "github.com/yggdrasil-network/yggdrasil-go/cmd/yggdrasil" + "github.com/yggdrasil-network/yggdrasil-go/cmd/yggdrasilctl" + "github.com/yggdrasil-network/yggdrasil-go/cmd/genkeys")) + #t))))) ;; https://github.com/kardianos/minwinsvc is windows only (propagated-inputs - `(("go-github-com-arceliar-phony" ,go-github-com-arceliar-phony) - ("go-github-com-cheggaaa-pb" ,go-github-com-cheggaaa-pb) - ("go-github-com-gologme-log" ,go-github-com-gologme-log) - ("go-github-com-hashicorp-go-syslog" ,go-github-com-hashicorp-go-syslog) - ("go-github-com-hjson-hjson-go" ,go-github-com-hjson-hjson-go) - ("go-github-com-kardianos-minwinsvc" ,go-github-com-kardianos-minwinsvc) + `(;;("go-golang-zx2c4-com-wireguard-windows" + ;; ,go-golang-zx2c4-com-wireguard-windows) + ("go-golang-zx2c4-com-wireguard" + ,go-golang-zx2c4-com-wireguard) + ("go-golang-org-x-text" ,go-golang-org-x-text) + ("go-golang-org-x-sys" ,go-golang-org-x-sys) + ("go-golang-org-x-net" ,go-golang-org-x-net) + ("go-golang-org-x-crypto" + ,go-golang-org-x-crypto) + ("go-netns" + ,go-netns) + ("go-netlink" + ,go-netlink) ("go-github-com-mitchellh-mapstructure" ,go-github-com-mitchellh-mapstructure) - ("go-golang-org-x-crypto" ,go-golang-org-x-crypto) - ("go-golang-org-x-net" ,go-golang-org-x-net) - ("go-golang-org-x-text" ,go-golang-org-x-text) - ("go-golang-zx2c4-com-wireguard" ,go-golang-zx2c4-com-wireguard) - ("go-netlink" ,go-netlink) - ("go-netns" ,go-netns))) + ("go-github-com-mattn-go-runewidth" + ,go-github-com-mattn-go-runewidth) + ("go-github-com-mattn-go-isatty" + ,go-github-com-mattn-go-isatty) + ("go-github-com-kardianos-minwinsvc" + ,go-github-com-kardianos-minwinsvc) + ("go-github-com-hjson-hjson-go" + ,go-github-com-hjson-hjson-go) + ("go-github-com-hashicorp-go-syslog" + ,go-github-com-hashicorp-go-syslog) + ("go-github-com-gologme-log" + ,go-github-com-gologme-log) + ("go-github-com-fatih-color" + ,go-github-com-fatih-color) + ("go-github-com-cheggaaa-pb-v3" + ,go-github-com-cheggaaa-pb-v3) + ("go-github-com-vividcortex-ewma" + ,go-github-com-vividcortex-ewma) + ("go-github-com-arceliar-phony" + ,go-github-com-arceliar-phony) + ("go-github-com-arceliar-ironwood" + ,go-github-com-arceliar-ironwood))) (home-page "https://yggdrasil-network.github.io/blog.html") (synopsis "Experiment in scalable routing as an encrypted IPv6 overlay network") diff --git a/gnu/packages/nss.scm b/gnu/packages/nss.scm index fcd6938022..b230044b57 100644 --- a/gnu/packages/nss.scm +++ b/gnu/packages/nss.scm @@ -1,6 +1,6 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019 Ludovic Courtès <ludo@gnu.org> -;;; Copyright © 2014, 2015, 2016, 2017, 2018, 2019 Mark H Weaver <mhw@netris.org> +;;; Copyright © 2014, 2015, 2016, 2017, 2018, 2019, 2021 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2016, 2017, 2018, 2019 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2020, 2021 Marius Bakke <marius@gnu.org> @@ -94,6 +94,19 @@ platform-neutral API for system level and libc-like functions. It is used in the Mozilla clients.") (license license:mpl2.0))) +(define-public nspr-4.32 + (package + (inherit nspr) + (version "4.32") + (source (origin + (method url-fetch) + (uri (string-append + "https://ftp.mozilla.org/pub/mozilla.org/nspr/releases/v" + version "/src/nspr-" version ".tar.gz")) + (sha256 + (base32 + "0v3zds1id71j5a5si42a658fjz8nv2f6zp6w4gqrqmdr6ksz8sxv")))))) + ;;; Note: When updating, verify that the nss-certs package still builds fine ;;; as it inherits its source from the nss package. (define-public nss @@ -208,3 +221,6 @@ applications. Applications built with NSS can support SSL v2 and v3, TLS, PKCS #5, PKCS #7, PKCS #11, PKCS #12, S/MIME, X.509 v3 certificates, and other security standards.") (license license:mpl2.0))) + +(define nss/fixed + (package-with-extra-patches nss (search-patches "nss-CVE-2021-43527.patch"))) diff --git a/gnu/packages/ocaml.scm b/gnu/packages/ocaml.scm index 1101227a9f..01c0bc3ba0 100644 --- a/gnu/packages/ocaml.scm +++ b/gnu/packages/ocaml.scm @@ -15,7 +15,7 @@ ;;; Copyright © 2019 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2020 Brett Gilio <brettg@gnu.org> ;;; Copyright © 2020 Marius Bakke <marius@gnu.org> -;;; Copyright © 2020 Simon Tournier <zimon.toutoune@gmail.com> +;;; Copyright © 2020, 2021 Simon Tournier <zimon.toutoune@gmail.com> ;;; Copyright © 2020 divoplade <d@divoplade.fr> ;;; Copyright © 2020, 2021 pukkamustard <pukkamustard@posteo.net> ;;; Copyright © 2021 aecepoglu <aecepoglu@fastmail.fm> @@ -3176,53 +3176,62 @@ many additional enhancements, including: license:gpl2)))) ; OMake itself, with ocaml linking exception ; see LICENSE.OMake +(define-public ocaml-benchmark + (package + (name "ocaml-benchmark") + (version "1.6") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/Chris00/ocaml-benchmark") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0d0vdfjgjzf1y6wkd714d8b0piv1z9qav5ahsapynqzk4b4ahhnp")))) + (build-system dune-build-system) + (arguments `(#:test-target "tests")) + (home-page "https://github.com/Chris00/ocaml-benchmark") + (synopsis "Benchmark running times of code") + (description + "This module provides a set of tools to measure the running times of +your functions and to easily compare the results. A statistical test +is used to determine whether the results truly differ.") + (license license:lgpl3+))) + (define-public ocaml-batteries (package (name "ocaml-batteries") - (version "2.10.0") + (version "3.3.0") (source (origin - (method url-fetch) - (uri (string-append "https://github.com/ocaml-batteries-team/" - "batteries-included/releases/download/v" - version "/batteries-" version ".tar.gz")) + (method git-fetch) + (uri (git-reference + (url "https://github.com/ocaml-batteries-team/batteries-included") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) (sha256 (base32 - "08ghw87d56h1a6y1nnh3x2wy9xj25jqfk5sp6ma9nsyd37babb0h")))) + "1h03nkc3vajaijqhj1dy5hw85j2hwwxdkg8rvs2fc00qaf44ad1d")))) (build-system ocaml-build-system) + (propagated-inputs `(("ocaml-num" ,ocaml-num))) (native-inputs `(("ocamlbuild" ,ocamlbuild) - ("qtest" ,ocaml-qtest))) - (propagated-inputs - `(("ocaml-num" ,ocaml-num))) + ("ocaml-benchmark" ,ocaml-benchmark) + ("ocaml-qcheck" ,ocaml-qcheck) + ("ocaml-qtest" ,ocaml-qtest))) (arguments `(#:phases (modify-phases %standard-phases - (delete 'check) ; tests are run by the build phase + (add-after 'unpack 'make-writable + (lambda _ + (for-each make-file-writable (find-files "." ".")))) (add-before 'build 'fix-nondeterminism (lambda _ (substitute* "setup.ml" (("Sys.readdir dirname") "let a = Sys.readdir dirname in Array.sort String.compare a; a")) - #t)) - (replace 'build - (lambda* (#:key inputs outputs #:allow-other-keys) - (let ((files - (map (lambda (str) - (substring str 0 (- (string-length str) 1))) - (append - (find-files "src" ".*.mliv") - (find-files "src" ".*.mlv") - (find-files "src" ".*.mlp"))))) - (apply invoke "ocamlbuild" "-no-links" "-use-ocamlfind" "-I" "num" - "-lflag" "-dllpath-all" files) - (for-each (lambda (file) - (copy-file (string-append "_build/" file) file)) - files)) - (invoke "ocamlbuild" "-no-links" "-use-ocamlfind" "-I" "num" - "-lflag" "-dllpath-all" "build/mkconf.byte") - (copy-file "_build/build/mkconf.byte" "build/mkconf.byte") - (invoke "make" "all") #t))))) + (properties `((ocaml4.07-variant . ,(delay ocaml4.07-batteries)))) (home-page "http://batteries.forge.ocamlcore.org/") (synopsis "Development platform for the OCaml programming language") (description "Define a standard set of libraries which may be expected on @@ -3230,6 +3239,54 @@ every compliant installation of OCaml and organize these libraries into a hierarchy of modules.") (license license:lgpl2.1+))) +(define-public ocaml4.07-batteries + (package-with-ocaml4.07 + (package + (inherit ocaml-batteries) + (version "2.10.0") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/ocaml-batteries-team/batteries-included") + (commit (string-append "v" version)))) + (file-name (git-file-name "ocaml-batteries" version)) + (sha256 + (base32 + "02fxa1nkp7rpiwfp04n0sagdp9lad4dh9bvljp95xfshm1cx7y4q")))) + (arguments + `(#:phases + (modify-phases %standard-phases + (delete 'check) ; tests are run by the build phase + (add-before 'build 'fix-nondeterminism + (lambda _ + (substitute* "setup.ml" + (("Sys.readdir dirname") + "let a = Sys.readdir dirname in Array.sort String.compare a; a")) + #t)) + (replace 'build + (lambda* (#:key inputs outputs #:allow-other-keys) + (let ((files + (map (lambda (str) + (substring str 0 (- (string-length str) 1))) + (append + (find-files "src" ".*.mliv") + (find-files "src" ".*.mlv") + (find-files "src" ".*.mlp"))))) + (apply invoke "ocamlbuild" "-no-links" "-use-ocamlfind" "-I" "num" + "-lflag" "-dllpath-all" files) + (for-each (lambda (file) + (copy-file (string-append "_build/" file) file)) + files)) + (invoke "ocamlbuild" "-no-links" "-use-ocamlfind" "-I" "num" + "-lflag" "-dllpath-all" "build/mkconf.byte") + (copy-file "_build/build/mkconf.byte" "build/mkconf.byte") + (invoke "make" "all") + #t))))) + (native-inputs + `(("ocamlbuild" ,ocamlbuild) + ("qtest" ,ocaml-qtest))) + (properties '())))) + (define-public ocaml-pcre (package (name "ocaml-pcre") @@ -3987,86 +4044,109 @@ library is currently designed for Unicode Standard 3.2.") (license license:lgpl2.0+))) (define-public ocaml-charinfo-width - (package - (name "ocaml-charinfo-width") - (version "1.1.0") - (source (origin - (method url-fetch) - (uri (string-append "https://bitbucket.org/zandoye/charinfo_width" - "/get/" version ".tar.gz")) - (file-name (string-append name "-" version ".tar.gz")) - (sha256 - (base32 - "00bv4p1yqs8y0z4z07wd9w9yyv669dikp9b04dcjbwpiy2wy0086")))) - (build-system dune-build-system) - (propagated-inputs - `(("ocaml-result" ,ocaml-result) - ("ocaml-camomile" ,ocaml-camomile))) - (native-inputs - `(("ocaml-ppx-expect" ,ocaml-ppx-expect))) - (properties - `((upstream-name . "charInfo_width"))) - (home-page "https://bitbucket.org/zandoye/charinfo_width/") - (synopsis "Determine column width for a character") - (description "This module is implements purely in OCaml a character width + ;; Add LICENSE file and Dune tests + (let ((commit "20aaaa6dca8f1e0b1ace55b6f2a8ba5e5910b620")) + (package + (name "ocaml-charinfo-width") + (version (git-version "1.1.0" "1" commit)) + (home-page "https://github.com/kandu/charinfo_width/") + (source (origin + (method git-fetch) + (uri (git-reference + (url home-page) + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "04gil5hxm2jax9paw3i24d8zyzhyl5cphzfyryvy2lcrm3c485q0")))) + (build-system dune-build-system) + (propagated-inputs + `(("ocaml-result" ,ocaml-result) + ("ocaml-camomile" ,ocaml-camomile))) + (native-inputs + `(("ocaml-ppx-expect" ,ocaml-ppx-expect))) + (properties + `((upstream-name . "charInfo_width"))) + (synopsis "Determine column width for a character") + (description "This module implements purely in OCaml a character width function that follows the prototype of POSIX's wcwidth.") - (license license:expat))) + (license license:expat)))) -(define-public ocaml4.07-zed +(define-public ocaml-zed (package - (name "ocaml4.07-zed") - (version "2.0.3") + (name "ocaml-zed") + (version "3.1.0") + (home-page "https://github.com/ocaml-community/zed") (source (origin (method git-fetch) (uri (git-reference - (url "https://github.com/diml/zed") + (url home-page) (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "0pa9awinqr0plp4b2az78dwpvh01pwaljnn5ydg8mc6hi7rmir55")))) + (base32 "04vr1a94imsghm98iigc35rhifsz0rh3qz2qm0wam2wvp6vmrx0p")))) (build-system dune-build-system) (arguments - `(#:test-target "." - #:ocaml ,ocaml-4.07 - #:findlib ,ocaml4.07-findlib - #:dune ,ocaml4.07-dune)) + `(#:test-target ".")) (propagated-inputs - `(("ocaml-camomile" ,(package-with-ocaml4.07 ocaml-camomile)) - ("ocaml-charinfo-width" ,(package-with-ocaml4.07 ocaml-charinfo-width)) - ("ocaml-react" ,(package-with-ocaml4.07 ocaml-react)))) - (home-page "https://github.com/diml/zed") - (synopsis "Abstract engine for text editing in OCaml") - (description "Zed is an abstract engine for text edition. It can be used -to write text editors, edition widgets, readlines, etc. You just have to -connect an engine to your inputs and rendering functions to get an editor.") + `(("ocaml-charInfo-width" ,ocaml-charinfo-width) + ("ocaml-camomile" ,ocaml-camomile) + ("ocaml-react" ,ocaml-react))) + (properties `((ocaml4.07-variant . ,(delay ocaml4.07-zed)))) + (synopsis "Abstract engine for text edition in OCaml") + (description + "This module provides an abstract engine for text edition. It can be +used to write text editors, edition widgets, readlines, and more. The module +Zed uses Camomile to fully support the Unicode specification, and implements +an UTF-8 encoded string type with validation, and a rope datastructure to +achieve efficient operations on large Unicode buffers. Zed also features a +regular expression search on ropes. To support efficient text edition +capabilities, Zed provides macro recording and cursor management facilities.") (license license:bsd-3))) -(define-public ocaml4.07-lambda-term +(define-public ocaml4.07-zed + (package-with-ocaml4.07 + (package + (inherit ocaml-zed) + (version "2.0.3") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/ocaml-community/zed") + (commit version))) + (file-name (git-file-name "ocaml4.07-zed" version)) + (sha256 + (base32 + "0pa9awinqr0plp4b2az78dwpvh01pwaljnn5ydg8mc6hi7rmir55")))) + (properties '())))) + +(define-public ocaml-lambda-term (package - (name "ocaml4.07-lambda-term") - (version "2.0.2") - (source - (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/diml/lambda-term") - (commit version))) - (file-name (git-file-name name version)) - (sha256 - (base32 "0zcjy6fvf0d3i2ssz96asl889n3r6bplyzk7xvb2s3dkxbgcisyy")))) + (name "ocaml-lambda-term") + (version "3.1.0") + (home-page "https://github.com/ocaml-community/lambda-term") + (source (origin + (method git-fetch) + (uri (git-reference + (url home-page) + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1k0ykiz0vhpyyj9fkss29ajas4fh1xh449j702xkvayqipzj1mkg")))) (build-system dune-build-system) (arguments - `(#:tests? #f - #:ocaml ,ocaml-4.07 - #:findlib ,ocaml4.07-findlib - #:dune ,ocaml4.07-dune)) + `(#:test-target ".")) (propagated-inputs - `(("ocaml-lwt" ,(package-with-ocaml4.07 ocaml-lwt)) - ("ocaml-lwt-log" ,(package-with-ocaml4.07 ocaml-lwt-log)) - ("ocaml-lwt-react" ,(package-with-ocaml4.07 ocaml-lwt-react)) - ("ocaml-zed" ,ocaml4.07-zed))) - (home-page "https://github.com/diml/lambda-term") + `(("ocaml-lwt" ,ocaml-lwt) + ("ocaml-lwt-log" ,ocaml-lwt-log) + ("ocaml-react" ,ocaml-react) + ("ocaml-zed" ,ocaml-zed) + ("ocaml-camomile" ,ocaml-camomile) + ("ocaml-lwt-react" ,ocaml-lwt-react) + ("ocaml-mew-vi" ,ocaml-mew-vi))) + (properties `((ocaml4.07-variant . ,(delay ocaml4.07-lambda-term)))) (synopsis "Terminal manipulation library for OCaml") (description "Lambda-Term is a cross-platform library for manipulating the terminal. It provides an abstraction for keys, mouse events, colors, as well as @@ -4076,10 +4156,31 @@ manipulation than, for example, ncurses, by providing a native OCaml interface instead of bindings to a C library.") (license license:bsd-3))) -(define-public ocaml4.07-utop +(define-public ocaml4.07-lambda-term + (package-with-ocaml4.07 + (package + (inherit ocaml-lambda-term) + (version "2.0.2") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/ocaml-community/lambda-term") + (commit version))) + (file-name (git-file-name "ocaml4.07-lambda-term" version)) + (sha256 + (base32 "0zcjy6fvf0d3i2ssz96asl889n3r6bplyzk7xvb2s3dkxbgcisyy")))) + (propagated-inputs + `(("ocaml-lwt" ,ocaml-lwt) + ("ocaml-lwt-log" ,ocaml-lwt-log) + ("ocaml-lwt-react" ,ocaml-lwt-react) + ("ocaml-zed" ,ocaml-zed))) + (properties '())))) + +(define-public ocaml-utop (package - (name "ocaml4.07-utop") - (version "2.4.3") + (name "ocaml-utop") + (version "2.8.0") (source (origin (method git-fetch) @@ -4088,21 +4189,19 @@ instead of bindings to a C library.") (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "1bl4943qpi3qy152dbdm5glhx19zsiylmn4rcxi8l66g58hikyjp")))) + (base32 "1zf4hg33sblzh2f65vk0292jg4jlwa8702kfwpsg1kcg4w6nsfdp")))) (build-system dune-build-system) (arguments - `(#:test-target "." - #:ocaml ,ocaml-4.07 - #:findlib ,ocaml4.07-findlib - #:dune ,ocaml4.07-dune)) + `(#:test-target ".")) (native-inputs - `(("cppo" ,(package-with-ocaml4.07 ocaml-cppo)))) + `(("ocaml-cppo" ,ocaml-cppo))) (propagated-inputs - `(("lambda-term" ,ocaml4.07-lambda-term) - ("lwt" ,(package-with-ocaml4.07 ocaml-lwt)) - ("react" ,(package-with-ocaml4.07 ocaml-react)) - ("camomile" ,(package-with-ocaml4.07 ocaml-camomile)) - ("zed" ,ocaml4.07-zed))) + `(("ocaml-lambda-term" ,ocaml-lambda-term) + ("ocaml-lwt" ,ocaml-lwt) + ("ocaml-lwt-react" ,ocaml-lwt-react) + ("ocaml-camomile" ,ocaml-camomile) + ("ocaml-react" ,ocaml-react))) + (properties `((ocaml4.07-variant . ,(delay ocaml4.07-utop)))) (home-page "https://github.com/ocaml-community/utop") (synopsis "Improved interface to the OCaml toplevel") (description "UTop is an improved toplevel for OCaml. It can run in a @@ -4110,6 +4209,28 @@ terminal or in Emacs. It supports line editing, history, real-time and context sensitive completion, colors, and more.") (license license:bsd-3))) +(define-public ocaml4.07-utop + (package-with-ocaml4.07 + (package + (inherit ocaml-utop) + (version "2.4.3") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/ocaml-community/utop") + (commit version))) + (file-name (git-file-name "ocaml4.07-utop" version)) + (sha256 + (base32 "1bl4943qpi3qy152dbdm5glhx19zsiylmn4rcxi8l66g58hikyjp")))) + (propagated-inputs + `(("ocaml-lambda-term" ,ocaml-lambda-term) + ("ocaml-lwt" ,ocaml-lwt) + ("ocaml-react" ,ocaml-react) + ("ocaml-camomile" ,ocaml-camomile) + ("ocaml-zed" ,ocaml-zed))) + (properties '())))) + (define-public ocaml-integers (package (name "ocaml-integers") @@ -5983,7 +6104,7 @@ match expressions, and if expressions.") (janestreet-origin "ppx_let" version "1wdfw6w4xbg97a35yg6bif9gggxniy9ddnrjfw1a0inkl2yamxkj")) - (properties `(upstream-name . "ppx_let"))))) + (properties `((upstream-name . "ppx_let")))))) (define-public ocaml4.07-ppx-fail (package @@ -7424,6 +7545,81 @@ between Bigstrings and other string-like types. @code{bigstringaf} provides these missing pieces.") (license license:bsd-3))) +(define-public ocaml-trie + (package + (name "ocaml-trie") + (version "1.0.0") + (home-page "https://github.com/kandu/trie/") + (source + (origin + (method git-fetch) + (uri (git-reference + (url home-page) + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0s7p9swjqjsqddylmgid6cv263ggq7pmb734z4k84yfcrgb6kg4g")))) + (build-system dune-build-system) + (arguments + '(#:tests? #f)) ;no tests + (synopsis "Strict impure trie tree") + (description + "This module implements strict impure trie tree data structure for +OCaml.") + (license license:expat))) + +(define-public ocaml-mew + (package + (name "ocaml-mew") + (version "0.1.0") + (home-page "https://github.com/kandu/mew") + (source + (origin + (method git-fetch) + (uri (git-reference + (url home-page) + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0417xsghj92v3xa5q4dk4nzf2r4mylrx2fd18i7cg3nzja65nia2")))) + (build-system dune-build-system) + (propagated-inputs + `(("ocaml-result" ,ocaml-result) + ("ocaml-trie" ,ocaml-trie))) + (native-inputs + `(("ocaml-ppx-expect" ,ocaml-ppx-expect))) + (synopsis "General modal editing engine generator") + (description + "This package provides the core modules of Modal Editing Witch, a general +modal editing engine generator.") + (license license:expat))) + +(define-public ocaml-mew-vi + (package + (name "ocaml-mew-vi") + (version "0.5.0") + (home-page "https://github.com/kandu/mew_vi") + (source + (origin + (method git-fetch) + (uri (git-reference + (url home-page) + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0lihbf822k5zasl60w5mhwmdkljlq49c9saayrws7g4qc1j353r8")))) + (build-system dune-build-system) + (propagated-inputs + `(("ocaml-mew" ,ocaml-mew) + ("ocaml-react" ,ocaml-react))) + (native-inputs + `(("ocaml-ppx-expect" ,ocaml-ppx-expect))) + (properties `((upstream-name . "mew_vi"))) + (synopsis "Modal editing VI-like editing engine generator") + (description "This module provides a vi-like modal editing engine +generator.") + (license license:expat))) + (define-public ocaml-syntax-shims (package (name "ocaml-syntax-shims") diff --git a/gnu/packages/package-management.scm b/gnu/packages/package-management.scm index bdffb80dda..27e5e6aa15 100644 --- a/gnu/packages/package-management.scm +++ b/gnu/packages/package-management.scm @@ -147,8 +147,8 @@ ;; Note: the 'update-guix-package.scm' script expects this definition to ;; start precisely like this. (let ((version "1.3.0") - (commit "9bbbac6783bcdace17d967e85c8ae8d14cbf1ef9") - (revision 12)) + (commit "8cc099b4250589c0d23fc6762868f6542433f143") + (revision 13)) (package (name "guix") @@ -164,7 +164,7 @@ (commit commit))) (sha256 (base32 - "1p0my0gfshdhm1dpqf6j68iipnigmpb23l8p81kwpw5w50x0hfda")) + "02azjxw9lwq7y0gw6dcmwhgimb0rapab8kh7qjvcr4j5xnaqv7rx")) (file-name (string-append "guix-" version "-checkout")))) (build-system gnu-build-system) (arguments @@ -1246,8 +1246,8 @@ environments.") (license (list license:gpl3+ license:agpl3+ license:silofl1.1)))) (define-public guix-build-coordinator - (let ((commit "c9c55c0a16c0d72ad11389baf722ce90644c45d7") - (revision "39")) + (let ((commit "226ec0f0f8a10842ffdd50dd464be33b2db45563") + (revision "40")) (package (name "guix-build-coordinator") (version (git-version "0" revision commit)) @@ -1258,7 +1258,7 @@ environments.") (commit commit))) (sha256 (base32 - "1sxbfc3fy9x8vvhkpj68m5gz0rj6h66w8xcsqi26zx85d7jcs3h3")) + "1sxvp7j5xypk6zlrs5y21lwx12h5r0c35ia9wqf0cyq8wjjaagh8")) (file-name (string-append name "-" version "-checkout")))) (build-system gnu-build-system) (arguments diff --git a/gnu/packages/parallel.scm b/gnu/packages/parallel.scm index e3813b1512..113e04c06f 100644 --- a/gnu/packages/parallel.scm +++ b/gnu/packages/parallel.scm @@ -61,14 +61,14 @@ (define-public parallel (package (name "parallel") - (version "20211022") + (version "20211122") (source (origin (method url-fetch) (uri (string-append "mirror://gnu/parallel/parallel-" version ".tar.bz2")) (sha256 - (base32 "16yyjvlm70lj7csaz4am98dlyqrc588xydnfnabxm71awby90wfs")))) + (base32 "0blnv1mpnlc949m5r4hg1smmsmyyzna0izhqg0dcp92n5hr5dcj8")))) (build-system gnu-build-system) (arguments `(#:phases diff --git a/gnu/packages/patches/coq-fix-envvars.patch b/gnu/packages/patches/coq-fix-envvars.patch new file mode 100644 index 0000000000..deecf5ce74 --- /dev/null +++ b/gnu/packages/patches/coq-fix-envvars.patch @@ -0,0 +1,139 @@ +From ebe09fcac72b21d17c4e8fe6edc1b6076a4ae97c Mon Sep 17 00:00:00 2001 +From: Julien Lepiller <julien@lepiller.eu> +Date: Sun, 21 Nov 2021 00:38:03 +0100 +Subject: [PATCH] Fix environment variable usage. + +--- + checker/checker.ml | 2 ++ + lib/envars.ml | 26 ++++++++++++++++---------- + sysinit/coqargs.ml | 3 ++- + sysinit/coqloadpath.ml | 3 ++- + sysinit/coqloadpath.mli | 2 +- + tools/coqdep.ml | 2 +- + 6 files changed, 24 insertions(+), 14 deletions(-) + +diff --git a/checker/checker.ml b/checker/checker.ml +index f55ed9e8d6..3b797729ed 100644 +--- a/checker/checker.ml ++++ b/checker/checker.ml +@@ -104,6 +104,7 @@ let set_include d p = + (* Initializes the LoadPath *) + let init_load_path () = + let coqlib = Envars.coqlib () in ++ let coqcorelib = Envars.coqcorelib () in + let user_contrib = coqlib/"user-contrib" in + let xdg_dirs = Envars.xdg_dirs in + let coqpath = Envars.coqpath in +@@ -111,6 +112,7 @@ let init_load_path () = + CPath.choose_existing + [ CPath.make [ coqlib ; "plugins" ] + ; CPath.make [ coqlib ; ".."; "coq-core"; "plugins" ] ++ ; CPath.make [ coqcorelib ; "plugins" ] + ] |> function + | None -> + CErrors.user_err (Pp.str "Cannot find plugins directory") +diff --git a/lib/envars.ml b/lib/envars.ml +index 750bd60e71..c7affbd437 100644 +--- a/lib/envars.ml ++++ b/lib/envars.ml +@@ -127,15 +127,21 @@ let check_file_else ~dir ~file oth = + let guess_coqlib fail = + getenv_else "COQLIB" (fun () -> + let prelude = "theories/Init/Prelude.vo" in +- check_file_else ~dir:Coq_config.coqlibsuffix ~file:prelude +- (fun () -> +- if Sys.file_exists (Coq_config.coqlib / prelude) +- then Coq_config.coqlib +- else +- fail "cannot guess a path for Coq libraries; please use -coqlib option \ +- or ensure you have installed the package containing Coq's stdlib (coq-stdlib in OPAM) \ +- If you intend to use Coq without a standard library, the -boot -noinit options must be used.") +- ) ++ let coqlibpath = getenv_else "COQLIBPATH" (fun () -> Coq_config.coqlibsuffix) in ++ let paths = path_to_list coqlibpath in ++ let valid_paths = ++ List.filter ++ (fun dir -> (check_file_else ~dir:dir ~file:prelude (fun () -> "")) <> "") ++ paths in ++ match valid_paths with ++ | [] -> ++ if Sys.file_exists (Coq_config.coqlib / prelude) ++ then Coq_config.coqlib ++ else ++ fail "cannot guess a path for Coq libraries; please use -coqlib option \ ++ or ensure you have installed the package containing Coq's stdlib (coq-stdlib in OPAM) \ ++ If you intend to use Coq without a standard library, the -boot -noinit options must be used." ++ | p::_ -> p) + + let coqlib_ref : string option ref = ref None + let set_user_coqlib path = coqlib_ref := Some path +@@ -208,7 +214,7 @@ let xdg_dirs ~warn = + let print_config ?(prefix_var_name="") f coq_src_subdirs = + let open Printf in + fprintf f "%sCOQLIB=%s/\n" prefix_var_name (coqlib ()); +- fprintf f "%sCOQCORELIB=%s/\n" prefix_var_name (coqlib () / "../coq-core/"); ++ fprintf f "%sCOQCORELIB=%s/\n" prefix_var_name (coqcorelib ()); + fprintf f "%sDOCDIR=%s/\n" prefix_var_name (docdir ()); + fprintf f "%sOCAMLFIND=%s\n" prefix_var_name (ocamlfind ()); + fprintf f "%sCAMLFLAGS=%s\n" prefix_var_name Coq_config.caml_flags; +diff --git a/sysinit/coqargs.ml b/sysinit/coqargs.ml +index 00f70a5fea..8325623a63 100644 +--- a/sysinit/coqargs.ml ++++ b/sysinit/coqargs.ml +@@ -453,7 +453,8 @@ let build_load_path opts = + if opts.pre.boot then [],[] + else + let coqlib = Envars.coqlib () in +- Coqloadpath.init_load_path ~coqlib in ++ let coqcorelib = Envars.coqcorelib () in ++ Coqloadpath.init_load_path ~coqlib ~coqcorelib in + ml_path @ opts.pre.ml_includes , + vo_path @ opts.pre.vo_includes + +diff --git a/sysinit/coqloadpath.ml b/sysinit/coqloadpath.ml +index 95ae5da3de..a58cfe6928 100644 +--- a/sysinit/coqloadpath.ml ++++ b/sysinit/coqloadpath.ml +@@ -35,7 +35,7 @@ let build_userlib_path ~unix_path = + else [], [] + + (* LoadPath for Coq user libraries *) +-let init_load_path ~coqlib = ++let init_load_path ~coqlib ~coqcorelib = + + let open Loadpath in + let user_contrib = coqlib/"user-contrib" in +@@ -50,6 +50,7 @@ let init_load_path ~coqlib = + CPath.choose_existing + [ CPath.make [ coqlib ; "plugins" ] + ; CPath.make [ coqlib ; ".."; "coq-core"; "plugins" ] ++ ; CPath.make [ coqcorelib ; "plugins" ] + ] |> function + | None -> + CErrors.user_err (Pp.str "Cannot find plugins directory") +diff --git a/sysinit/coqloadpath.mli b/sysinit/coqloadpath.mli +index d853e9ea54..43c6dfa134 100644 +--- a/sysinit/coqloadpath.mli ++++ b/sysinit/coqloadpath.mli +@@ -12,5 +12,5 @@ + includes (in-order) Coq's standard library, Coq's [user-contrib] + folder, and directories specified in [COQPATH] and [XDG_DIRS] *) + val init_load_path +- : coqlib:CUnix.physical_path ++ : coqlib:CUnix.physical_path -> coqcorelib:CUnix.physical_path + -> CUnix.physical_path list * Loadpath.vo_path list +diff --git a/tools/coqdep.ml b/tools/coqdep.ml +index c1c87993e1..6c78e10866 100644 +--- a/tools/coqdep.ml ++++ b/tools/coqdep.ml +@@ -33,7 +33,7 @@ let coqdep () = + let coqlib = Envars.coqlib () in + let coq_plugins_dir = Filename.concat (Envars.coqcorelib ()) "plugins" in + if not (Sys.file_exists coq_plugins_dir) then +- CErrors.user_err Pp.(str "coqdep: cannot find plugins directory for coqlib: " ++ str coqlib ++ fnl ()); ++ CErrors.user_err Pp.(str "coqdep: cannot find plugins directory " ++ str coq_plugins_dir ++ str " for coqlib: " ++ str coqlib ++ fnl ()); + CD.add_rec_dir_import CD.add_coqlib_known (coqlib//"theories") ["Coq"]; + CD.add_rec_dir_import CD.add_coqlib_known (coq_plugins_dir) ["Coq"]; + let user = coqlib//"user-contrib" in +-- +2.33.1 diff --git a/gnu/packages/patches/dynaconf-unvendor-deps.patch b/gnu/packages/patches/dynaconf-unvendor-deps.patch new file mode 100644 index 0000000000..550e311363 --- /dev/null +++ b/gnu/packages/patches/dynaconf-unvendor-deps.patch @@ -0,0 +1,179 @@ +From 3f7b48195500cbbbbecd3cac2f5308c64004479b Mon Sep 17 00:00:00 2001 +From: Giacomo Leidi <goodoldpaul@autistici.org> +Date: Sun, 29 Aug 2021 23:39:27 +0200 +Subject: [PATCH] Use system site dependencies. + +Box was not unvendored because it appears to be heavily patched. +--- + dynaconf/cli.py | 4 ++-- + dynaconf/default_settings.py | 2 +- + dynaconf/loaders/env_loader.py | 2 +- + dynaconf/loaders/toml_loader.py | 2 +- + dynaconf/loaders/yaml_loader.py | 2 +- + dynaconf/utils/parse_conf.py | 2 +- + dynaconf/vendor/box/converters.py | 4 ++-- + dynaconf/vendor/box/from_file.py | 4 ++-- + dynaconf/vendor_src/box/converters.py | 4 ++-- + dynaconf/vendor_src/box/from_file.py | 4 ++-- + tests/test_cli.py | 2 +- + 11 files changed, 16 insertions(+), 16 deletions(-) + +diff --git a/dynaconf/cli.py b/dynaconf/cli.py +index 5bb8316..1341a95 100644 +--- a/dynaconf/cli.py ++++ b/dynaconf/cli.py +@@ -20,8 +20,8 @@ from dynaconf.utils.functional import empty + from dynaconf.utils.parse_conf import parse_conf_data + from dynaconf.validator import ValidationError + from dynaconf.validator import Validator +-from dynaconf.vendor import click +-from dynaconf.vendor import toml ++import click ++import toml + + + CWD = Path.cwd() +diff --git a/dynaconf/default_settings.py b/dynaconf/default_settings.py +index 66601b0..9605fc5 100644 +--- a/dynaconf/default_settings.py ++++ b/dynaconf/default_settings.py +@@ -8,7 +8,7 @@ from dynaconf.utils import upperfy + from dynaconf.utils import warn_deprecations + from dynaconf.utils.files import find_file + from dynaconf.utils.parse_conf import parse_conf_data +-from dynaconf.vendor.dotenv import load_dotenv ++from dotenv import load_dotenv + + + def try_renamed(key, value, older_key, current_key): +diff --git a/dynaconf/loaders/env_loader.py b/dynaconf/loaders/env_loader.py +index e7b13bd..b034c8a 100644 +--- a/dynaconf/loaders/env_loader.py ++++ b/dynaconf/loaders/env_loader.py +@@ -2,7 +2,7 @@ from os import environ + + from dynaconf.utils import upperfy + from dynaconf.utils.parse_conf import parse_conf_data +-from dynaconf.vendor.dotenv import cli as dotenv_cli ++from dotenv import cli as dotenv_cli + + + IDENTIFIER = "env" +diff --git a/dynaconf/loaders/toml_loader.py b/dynaconf/loaders/toml_loader.py +index 07b973f..d81d675 100644 +--- a/dynaconf/loaders/toml_loader.py ++++ b/dynaconf/loaders/toml_loader.py +@@ -5,7 +5,7 @@ from dynaconf import default_settings + from dynaconf.constants import TOML_EXTENSIONS + from dynaconf.loaders.base import BaseLoader + from dynaconf.utils import object_merge +-from dynaconf.vendor import toml ++import toml + + + def load(obj, env=None, silent=True, key=None, filename=None): +diff --git a/dynaconf/loaders/yaml_loader.py b/dynaconf/loaders/yaml_loader.py +index 33c6532..3ef419a 100644 +--- a/dynaconf/loaders/yaml_loader.py ++++ b/dynaconf/loaders/yaml_loader.py +@@ -7,7 +7,7 @@ from dynaconf.constants import YAML_EXTENSIONS + from dynaconf.loaders.base import BaseLoader + from dynaconf.utils import object_merge + from dynaconf.utils.parse_conf import try_to_encode +-from dynaconf.vendor.ruamel import yaml ++from ruamel import yaml + + # Add support for Dynaconf Lazy values to YAML dumper + yaml.SafeDumper.yaml_representers[ +diff --git a/dynaconf/utils/parse_conf.py b/dynaconf/utils/parse_conf.py +index c42b07a..01ccdae 100644 +--- a/dynaconf/utils/parse_conf.py ++++ b/dynaconf/utils/parse_conf.py +@@ -9,7 +9,7 @@ from dynaconf.utils import isnamedtupleinstance + from dynaconf.utils import multi_replace + from dynaconf.utils import recursively_evaluate_lazy_format + from dynaconf.utils.boxing import DynaBox +-from dynaconf.vendor import toml ++import toml + + try: + from jinja2 import Environment +diff --git a/dynaconf/vendor/box/converters.py b/dynaconf/vendor/box/converters.py +index 93cdcfb..e34c7dc 100644 +--- a/dynaconf/vendor/box/converters.py ++++ b/dynaconf/vendor/box/converters.py +@@ -7,9 +7,9 @@ _B='utf-8' + _A=None + import csv,json,sys,warnings + from pathlib import Path +-import dynaconf.vendor.ruamel.yaml as yaml ++import ruamel.yaml as yaml + from dynaconf.vendor.box.exceptions import BoxError,BoxWarning +-from dynaconf.vendor import toml ++import toml + BOX_PARAMETERS='default_box','default_box_attr','conversion_box','frozen_box','camel_killer_box','box_safe_prefix','box_duplicates','ordered_box','default_box_none_transform','box_dots','modify_tuples_box','box_intact_types','box_recast' + def _exists(filename,create=_E): + A=filename;B=Path(A) +diff --git a/dynaconf/vendor/box/from_file.py b/dynaconf/vendor/box/from_file.py +index daa1137..d75940b 100644 +--- a/dynaconf/vendor/box/from_file.py ++++ b/dynaconf/vendor/box/from_file.py +@@ -1,8 +1,8 @@ + from json import JSONDecodeError + from pathlib import Path + from typing import Union +-from dynaconf.vendor.toml import TomlDecodeError +-from dynaconf.vendor.ruamel.yaml import YAMLError ++from toml import TomlDecodeError ++from ruamel.yaml import YAMLError + from .exceptions import BoxError + from .box import Box + from .box_list import BoxList +diff --git a/dynaconf/vendor_src/box/converters.py b/dynaconf/vendor_src/box/converters.py +index c9a2293..ae42bf6 100644 +--- a/dynaconf/vendor_src/box/converters.py ++++ b/dynaconf/vendor_src/box/converters.py +@@ -9,9 +9,9 @@ import sys + import warnings + from pathlib import Path + +-import dynaconf.vendor.ruamel.yaml as yaml ++import ruamel.yaml as yaml + from dynaconf.vendor.box.exceptions import BoxError, BoxWarning +-from dynaconf.vendor import toml ++import toml + + + BOX_PARAMETERS = ('default_box', 'default_box_attr', 'conversion_box', +diff --git a/dynaconf/vendor_src/box/from_file.py b/dynaconf/vendor_src/box/from_file.py +index 2e2a6ad..3f76819 100644 +--- a/dynaconf/vendor_src/box/from_file.py ++++ b/dynaconf/vendor_src/box/from_file.py +@@ -3,8 +3,8 @@ + from json import JSONDecodeError + from pathlib import Path + from typing import Union +-from dynaconf.vendor.toml import TomlDecodeError +-from dynaconf.vendor.ruamel.yaml import YAMLError ++from toml import TomlDecodeError ++from ruamel.yaml import YAMLError + + + from .exceptions import BoxError +diff --git a/tests/test_cli.py b/tests/test_cli.py +index 6693701..df44409 100644 +--- a/tests/test_cli.py ++++ b/tests/test_cli.py +@@ -11,7 +11,7 @@ from dynaconf.cli import main + from dynaconf.cli import read_file_in_root_directory + from dynaconf.cli import WRITERS + from dynaconf.utils.files import read_file +-from dynaconf.vendor.click.testing import CliRunner ++from click.testing import CliRunner + + + runner = CliRunner() + +base-commit: ebf7b17cffd5e08b212948bd8036d580718d5bf8 +-- +2.32.0 diff --git a/gnu/packages/patches/icecat-78-makeicecat.patch b/gnu/packages/patches/icecat-78-makeicecat.patch deleted file mode 100644 index edd1ced257..0000000000 --- a/gnu/packages/patches/icecat-78-makeicecat.patch +++ /dev/null @@ -1,110 +0,0 @@ -Make some of the changes needed to the 'makeicecat' script, to allow it to run -in a snippet without network access. After this patch is applied, some -additional changes will be made using 'substitute*'. - -diff --git a/makeicecat b/makeicecat -index 8be2362..48716f2 100755 ---- a/makeicecat -+++ b/makeicecat -@@ -31,55 +31,55 @@ SOURCEDIR=icecat-$FFVERSION - - DATA="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"/data - --mkdir -p output --cd output -+# mkdir -p output -+# cd output - - ############################################################################### - # Retrieve FF source code - ############################################################################### - --rm mozilla-esr${FFMAJOR} $SOURCEDIR -rf -- --wget -N https://ftp.mozilla.org/pub/mozilla.org/firefox/releases/${FFVERSION}esr/source/firefox-${FFVERSION}esr.source.tar.xz --wget -N https://ftp.mozilla.org/pub/mozilla.org/firefox/releases/${FFVERSION}esr/source/firefox-${FFVERSION}esr.source.tar.xz.asc --gpg --recv-keys --keyserver keyserver.ubuntu.com 14F26682D0916CDD81E37B6D61B7B526D98F0353 --gpg --verify firefox-${FFVERSION}esr.source.tar.xz.asc --echo -n 1aa041db28cd742e93d663a9da8defd33040b38d8b9470350538473251621643 firefox-${FFVERSION}esr.source.tar.xz |sha256sum -c - -- --echo Extracting Firefox tarball --tar -xf firefox-${FFVERSION}esr.source.tar.xz -- --mv firefox-${FFVERSION} $SOURCEDIR -+# rm mozilla-esr${FFMAJOR} $SOURCEDIR -rf -+# -+# wget -N https://ftp.mozilla.org/pub/mozilla.org/firefox/releases/${FFVERSION}esr/source/firefox-${FFVERSION}esr.source.tar.xz -+# wget -N https://ftp.mozilla.org/pub/mozilla.org/firefox/releases/${FFVERSION}esr/source/firefox-${FFVERSION}esr.source.tar.xz.asc -+# gpg --recv-keys --keyserver keyserver.ubuntu.com 14F26682D0916CDD81E37B6D61B7B526D98F0353 -+# gpg --verify firefox-${FFVERSION}esr.source.tar.xz.asc -+# echo -n 1aa041db28cd742e93d663a9da8defd33040b38d8b9470350538473251621643 firefox-${FFVERSION}esr.source.tar.xz |sha256sum -c - -+# -+# echo Extracting Firefox tarball -+# tar -xf firefox-${FFVERSION}esr.source.tar.xz -+# -+# mv firefox-${FFVERSION} $SOURCEDIR - - ############################################################################### - # Retrieve l10n - ############################################################################### - --mkdir l10n --cd l10n --while read line;do -- line=$(echo $line |cut -d' ' -f1) -- #[ $line = "es-ES" ] || continue # To speed up testing -- [ $line = "en-US" ] && continue -- hg clone https://hg.mozilla.org/l10n-central/$line -- mkdir -p $line/browser/chrome/browser/preferences -- touch $line/browser/chrome/browser/preferences/advanced-scripts.dtd -- rm -rf $line/.hg* --done < ../$SOURCEDIR/browser/locales/shipped-locales --cd .. -- --mv l10n $SOURCEDIR -- --hg clone https://hg.mozilla.org/l10n/compare-locales/ --cd compare-locales/ --hg checkout RELEASE_8_0_0 --cd .. --rm compare-locales/.hg* compare-locales/.git* -rf --mv compare-locales $SOURCEDIR/l10n -+# mkdir l10n -+# cd l10n -+# while read line;do -+# line=$(echo $line |cut -d' ' -f1) -+# #[ $line = "es-ES" ] || continue # To speed up testing -+# [ $line = "en-US" ] && continue -+# hg clone https://hg.mozilla.org/l10n-central/$line -+# mkdir -p $line/browser/chrome/browser/preferences -+# touch $line/browser/chrome/browser/preferences/advanced-scripts.dtd -+# rm -rf $line/.hg* -+# done < ../$SOURCEDIR/browser/locales/shipped-locales -+# cd .. -+# -+# mv l10n $SOURCEDIR -+# -+# hg clone https://hg.mozilla.org/l10n/compare-locales/ -+# cd compare-locales/ -+# hg checkout RELEASE_8_0_0 -+# cd .. -+# rm compare-locales/.hg* compare-locales/.git* -rf -+# mv compare-locales $SOURCEDIR/l10n - - ####################################################### - --cd $SOURCEDIR -+# cd $SOURCEDIR - - shopt -s nullglob - for patch in $DATA/patches/*.patch; do -@@ -598,6 +598,6 @@ sed 's/777/755/;' -i toolkit/crashreporter/google-breakpad/Makefile.in - # Fix CVE-2012-3386 - /bin/sed 's/chmod a+w/chmod u+w/' -i ./js/src/ctypes/libffi/Makefile.in ./toolkit/crashreporter/google-breakpad/Makefile.in ./toolkit/crashreporter/google-breakpad/src/third_party/glog/Makefile.in || true - --cd .. --echo Packaging tarball --tar cfj icecat-$ICECATVERSION.tar.bz2 $SOURCEDIR -+# cd .. -+# echo Packaging tarball -+# tar cfj icecat-$ICECATVERSION.tar.bz2 $SOURCEDIR diff --git a/gnu/packages/patches/icecat-CVE-2021-43527.patch b/gnu/packages/patches/icecat-CVE-2021-43527.patch new file mode 100644 index 0000000000..66706ea5e0 --- /dev/null +++ b/gnu/packages/patches/icecat-CVE-2021-43527.patch @@ -0,0 +1,354 @@ +Fixes CVE-2021-43527. +Copied from <https://hg.mozilla.org/projects/nss/rev/dea71cbef9e03636f37c6cb120f8deccce6e17dd>, +but with the file names adjusted to allow easy use within GNU Guix. + +# HG changeset patch +# User Dennis Jackson <djackson@mozilla.com> +# Date 1637577642 0 +# Node ID dea71cbef9e03636f37c6cb120f8deccce6e17dd +# Parent da3d22d708c9cc0a32cff339658aeb627575e371 +Bug 1737470 - Ensure DER encoded signatures are within size limits. r=jschanck,mt,bbeurdouche,rrelyea + +Differential Revision: https://phabricator.services.mozilla.com/D129514 + +--- a/security/nss/lib/cryptohi/secvfy.c ++++ b/security/nss/lib/cryptohi/secvfy.c +@@ -159,58 +159,89 @@ verifyPKCS1DigestInfo(const VFYContext * + SECItem pkcs1DigestInfo; + pkcs1DigestInfo.data = cx->pkcs1RSADigestInfo; + pkcs1DigestInfo.len = cx->pkcs1RSADigestInfoLen; + return _SGN_VerifyPKCS1DigestInfo( + cx->hashAlg, digest, &pkcs1DigestInfo, + PR_FALSE /*XXX: unsafeAllowMissingParameters*/); + } + ++static unsigned int ++checkedSignatureLen(const SECKEYPublicKey *pubk) ++{ ++ unsigned int sigLen = SECKEY_SignatureLen(pubk); ++ if (sigLen == 0) { ++ /* Error set by SECKEY_SignatureLen */ ++ return sigLen; ++ } ++ unsigned int maxSigLen; ++ switch (pubk->keyType) { ++ case rsaKey: ++ case rsaPssKey: ++ maxSigLen = (RSA_MAX_MODULUS_BITS + 7) / 8; ++ break; ++ case dsaKey: ++ maxSigLen = DSA_MAX_SIGNATURE_LEN; ++ break; ++ case ecKey: ++ maxSigLen = 2 * MAX_ECKEY_LEN; ++ break; ++ default: ++ PORT_SetError(SEC_ERROR_UNSUPPORTED_KEYALG); ++ return 0; ++ } ++ if (sigLen > maxSigLen) { ++ PORT_SetError(SEC_ERROR_INVALID_KEY); ++ return 0; ++ } ++ return sigLen; ++} ++ + /* + * decode the ECDSA or DSA signature from it's DER wrapping. + * The unwrapped/raw signature is placed in the buffer pointed + * to by dsig and has enough room for len bytes. + */ + static SECStatus + decodeECorDSASignature(SECOidTag algid, const SECItem *sig, unsigned char *dsig, + unsigned int len) + { + SECItem *dsasig = NULL; /* also used for ECDSA */ +- SECStatus rv = SECSuccess; + +- if ((algid != SEC_OID_ANSIX9_DSA_SIGNATURE) && +- (algid != SEC_OID_ANSIX962_EC_PUBLIC_KEY)) { +- if (sig->len != len) { +- PORT_SetError(SEC_ERROR_BAD_DER); +- return SECFailure; ++ /* Safety: Ensure algId is as expected and that signature size is within maxmimums */ ++ if (algid == SEC_OID_ANSIX9_DSA_SIGNATURE) { ++ if (len > DSA_MAX_SIGNATURE_LEN) { ++ goto loser; + } +- +- PORT_Memcpy(dsig, sig->data, sig->len); +- return SECSuccess; ++ } else if (algid == SEC_OID_ANSIX962_EC_PUBLIC_KEY) { ++ if (len > MAX_ECKEY_LEN * 2) { ++ goto loser; ++ } ++ } else { ++ goto loser; + } + +- if (algid == SEC_OID_ANSIX962_EC_PUBLIC_KEY) { +- if (len > MAX_ECKEY_LEN * 2) { +- PORT_SetError(SEC_ERROR_BAD_DER); +- return SECFailure; +- } ++ /* Decode and pad to length */ ++ dsasig = DSAU_DecodeDerSigToLen((SECItem *)sig, len); ++ if (dsasig == NULL) { ++ goto loser; + } +- dsasig = DSAU_DecodeDerSigToLen((SECItem *)sig, len); +- +- if ((dsasig == NULL) || (dsasig->len != len)) { +- rv = SECFailure; +- } else { +- PORT_Memcpy(dsig, dsasig->data, dsasig->len); ++ if (dsasig->len != len) { ++ SECITEM_FreeItem(dsasig, PR_TRUE); ++ goto loser; + } + +- if (dsasig != NULL) +- SECITEM_FreeItem(dsasig, PR_TRUE); +- if (rv == SECFailure) +- PORT_SetError(SEC_ERROR_BAD_DER); +- return rv; ++ PORT_Memcpy(dsig, dsasig->data, len); ++ SECITEM_FreeItem(dsasig, PR_TRUE); ++ ++ return SECSuccess; ++ ++loser: ++ PORT_SetError(SEC_ERROR_BAD_DER); ++ return SECFailure; + } + + const SEC_ASN1Template hashParameterTemplate[] = + { + { SEC_ASN1_SEQUENCE, 0, NULL, sizeof(SECItem) }, + { SEC_ASN1_OBJECT_ID, 0 }, + { SEC_ASN1_SKIP_REST }, + { 0 } +@@ -276,17 +307,17 @@ sec_GetEncAlgFromSigAlg(SECOidTag sigAlg + * + * Returns: SECSuccess if the algorithm was acceptable, SECFailure if the + * algorithm was not found or was not a signing algorithm. + */ + SECStatus + sec_DecodeSigAlg(const SECKEYPublicKey *key, SECOidTag sigAlg, + const SECItem *param, SECOidTag *encalgp, SECOidTag *hashalg) + { +- int len; ++ unsigned int len; + PLArenaPool *arena; + SECStatus rv; + SECItem oid; + SECOidTag encalg; + + PR_ASSERT(hashalg != NULL); + PR_ASSERT(encalgp != NULL); + +@@ -461,58 +492,62 @@ vfy_CreateContext(const SECKEYPublicKey + cx->wincx = wincx; + cx->hasSignature = (sig != NULL); + cx->encAlg = encAlg; + cx->hashAlg = hashAlg; + cx->key = SECKEY_CopyPublicKey(key); + cx->pkcs1RSADigestInfo = NULL; + rv = SECSuccess; + if (sig) { +- switch (type) { +- case rsaKey: +- rv = recoverPKCS1DigestInfo(hashAlg, &cx->hashAlg, +- &cx->pkcs1RSADigestInfo, +- &cx->pkcs1RSADigestInfoLen, +- cx->key, +- sig, wincx); +- break; +- case rsaPssKey: +- sigLen = SECKEY_SignatureLen(key); +- if (sigLen == 0) { +- /* error set by SECKEY_SignatureLen */ +- rv = SECFailure; ++ rv = SECFailure; ++ if (type == rsaKey) { ++ rv = recoverPKCS1DigestInfo(hashAlg, &cx->hashAlg, ++ &cx->pkcs1RSADigestInfo, ++ &cx->pkcs1RSADigestInfoLen, ++ cx->key, ++ sig, wincx); ++ } else { ++ sigLen = checkedSignatureLen(key); ++ /* Check signature length is within limits */ ++ if (sigLen == 0) { ++ /* error set by checkedSignatureLen */ ++ rv = SECFailure; ++ goto loser; ++ } ++ if (sigLen > sizeof(cx->u)) { ++ PORT_SetError(SEC_ERROR_BAD_SIGNATURE); ++ rv = SECFailure; ++ goto loser; ++ } ++ switch (type) { ++ case rsaPssKey: ++ if (sig->len != sigLen) { ++ PORT_SetError(SEC_ERROR_BAD_SIGNATURE); ++ rv = SECFailure; ++ goto loser; ++ } ++ PORT_Memcpy(cx->u.buffer, sig->data, sigLen); ++ rv = SECSuccess; + break; +- } +- if (sig->len != sigLen) { +- PORT_SetError(SEC_ERROR_BAD_SIGNATURE); ++ case ecKey: ++ case dsaKey: ++ /* decodeECorDSASignature will check sigLen == sig->len after padding */ ++ rv = decodeECorDSASignature(encAlg, sig, cx->u.buffer, sigLen); ++ break; ++ default: ++ /* Unreachable */ + rv = SECFailure; +- break; +- } +- PORT_Memcpy(cx->u.buffer, sig->data, sigLen); +- break; +- case dsaKey: +- case ecKey: +- sigLen = SECKEY_SignatureLen(key); +- if (sigLen == 0) { +- /* error set by SECKEY_SignatureLen */ +- rv = SECFailure; +- break; +- } +- rv = decodeECorDSASignature(encAlg, sig, cx->u.buffer, sigLen); +- break; +- default: +- rv = SECFailure; +- PORT_SetError(SEC_ERROR_UNSUPPORTED_KEYALG); +- break; ++ goto loser; ++ } ++ } ++ if (rv != SECSuccess) { ++ goto loser; + } + } + +- if (rv) +- goto loser; +- + /* check hash alg again, RSA may have changed it.*/ + if (HASH_GetHashTypeByOidTag(cx->hashAlg) == HASH_AlgNULL) { + /* error set by HASH_GetHashTypeByOidTag */ + goto loser; + } + /* check the policy on the hash algorithm. Do this after + * the rsa decode because some uses of this function get hash implicitly + * from the RSA signature itself. */ +@@ -645,21 +680,26 @@ VFY_EndWithSignature(VFYContext *cx, SEC + if (cx->hashcx == NULL) { + PORT_SetError(SEC_ERROR_INVALID_ARGS); + return SECFailure; + } + (*cx->hashobj->end)(cx->hashcx, final, &part, sizeof(final)); + switch (cx->key->keyType) { + case ecKey: + case dsaKey: +- dsasig.data = cx->u.buffer; +- dsasig.len = SECKEY_SignatureLen(cx->key); ++ dsasig.len = checkedSignatureLen(cx->key); + if (dsasig.len == 0) { + return SECFailure; + } ++ if (dsasig.len > sizeof(cx->u)) { ++ PORT_SetError(SEC_ERROR_BAD_SIGNATURE); ++ return SECFailure; ++ } ++ dsasig.data = cx->u.buffer; ++ + if (sig) { + rv = decodeECorDSASignature(cx->encAlg, sig, dsasig.data, + dsasig.len); + if (rv != SECSuccess) { + PORT_SetError(SEC_ERROR_BAD_SIGNATURE); + return SECFailure; + } + } +@@ -681,18 +721,23 @@ VFY_EndWithSignature(VFYContext *cx, SEC + cx->params, + &mech); + PORT_DestroyCheapArena(&tmpArena); + if (rv != SECSuccess) { + return SECFailure; + } + + rsasig.data = cx->u.buffer; +- rsasig.len = SECKEY_SignatureLen(cx->key); ++ rsasig.len = checkedSignatureLen(cx->key); + if (rsasig.len == 0) { ++ /* Error set by checkedSignatureLen */ ++ return SECFailure; ++ } ++ if (rsasig.len > sizeof(cx->u)) { ++ PORT_SetError(SEC_ERROR_BAD_SIGNATURE); + return SECFailure; + } + if (sig) { + if (sig->len != rsasig.len) { + PORT_SetError(SEC_ERROR_BAD_SIGNATURE); + return SECFailure; + } + PORT_Memcpy(rsasig.data, sig->data, rsasig.len); +@@ -744,37 +789,42 @@ VFY_End(VFYContext *cx) + static SECStatus + vfy_VerifyDigest(const SECItem *digest, const SECKEYPublicKey *key, + const SECItem *sig, SECOidTag encAlg, SECOidTag hashAlg, + void *wincx) + { + SECStatus rv; + VFYContext *cx; + SECItem dsasig; /* also used for ECDSA */ +- + rv = SECFailure; + + cx = vfy_CreateContext(key, sig, encAlg, hashAlg, NULL, wincx); + if (cx != NULL) { + switch (key->keyType) { + case rsaKey: + rv = verifyPKCS1DigestInfo(cx, digest); ++ /* Error (if any) set by verifyPKCS1DigestInfo */ + break; +- case dsaKey: + case ecKey: ++ case dsaKey: + dsasig.data = cx->u.buffer; +- dsasig.len = SECKEY_SignatureLen(cx->key); ++ dsasig.len = checkedSignatureLen(cx->key); + if (dsasig.len == 0) { ++ /* Error set by checkedSignatureLen */ ++ rv = SECFailure; + break; + } +- if (PK11_Verify(cx->key, &dsasig, (SECItem *)digest, cx->wincx) != +- SECSuccess) { ++ if (dsasig.len > sizeof(cx->u)) { + PORT_SetError(SEC_ERROR_BAD_SIGNATURE); +- } else { +- rv = SECSuccess; ++ rv = SECFailure; ++ break; ++ } ++ rv = PK11_Verify(cx->key, &dsasig, (SECItem *)digest, cx->wincx); ++ if (rv != SECSuccess) { ++ PORT_SetError(SEC_ERROR_BAD_SIGNATURE); + } + break; + default: + break; + } + VFY_DestroyContext(cx, PR_TRUE); + } + return rv; + diff --git a/gnu/packages/patches/nss-CVE-2021-43527.patch b/gnu/packages/patches/nss-CVE-2021-43527.patch new file mode 100644 index 0000000000..b619438f37 --- /dev/null +++ b/gnu/packages/patches/nss-CVE-2021-43527.patch @@ -0,0 +1,354 @@ +Fixes CVE-2021-43527. +Copied from <https://hg.mozilla.org/projects/nss/rev/dea71cbef9e03636f37c6cb120f8deccce6e17dd>, +but with the file names adjusted to allow easy use within GNU Guix. + +# HG changeset patch +# User Dennis Jackson <djackson@mozilla.com> +# Date 1637577642 0 +# Node ID dea71cbef9e03636f37c6cb120f8deccce6e17dd +# Parent da3d22d708c9cc0a32cff339658aeb627575e371 +Bug 1737470 - Ensure DER encoded signatures are within size limits. r=jschanck,mt,bbeurdouche,rrelyea + +Differential Revision: https://phabricator.services.mozilla.com/D129514 + +--- a/nss/lib/cryptohi/secvfy.c ++++ b/nss/lib/cryptohi/secvfy.c +@@ -159,58 +159,89 @@ verifyPKCS1DigestInfo(const VFYContext * + SECItem pkcs1DigestInfo; + pkcs1DigestInfo.data = cx->pkcs1RSADigestInfo; + pkcs1DigestInfo.len = cx->pkcs1RSADigestInfoLen; + return _SGN_VerifyPKCS1DigestInfo( + cx->hashAlg, digest, &pkcs1DigestInfo, + PR_FALSE /*XXX: unsafeAllowMissingParameters*/); + } + ++static unsigned int ++checkedSignatureLen(const SECKEYPublicKey *pubk) ++{ ++ unsigned int sigLen = SECKEY_SignatureLen(pubk); ++ if (sigLen == 0) { ++ /* Error set by SECKEY_SignatureLen */ ++ return sigLen; ++ } ++ unsigned int maxSigLen; ++ switch (pubk->keyType) { ++ case rsaKey: ++ case rsaPssKey: ++ maxSigLen = (RSA_MAX_MODULUS_BITS + 7) / 8; ++ break; ++ case dsaKey: ++ maxSigLen = DSA_MAX_SIGNATURE_LEN; ++ break; ++ case ecKey: ++ maxSigLen = 2 * MAX_ECKEY_LEN; ++ break; ++ default: ++ PORT_SetError(SEC_ERROR_UNSUPPORTED_KEYALG); ++ return 0; ++ } ++ if (sigLen > maxSigLen) { ++ PORT_SetError(SEC_ERROR_INVALID_KEY); ++ return 0; ++ } ++ return sigLen; ++} ++ + /* + * decode the ECDSA or DSA signature from it's DER wrapping. + * The unwrapped/raw signature is placed in the buffer pointed + * to by dsig and has enough room for len bytes. + */ + static SECStatus + decodeECorDSASignature(SECOidTag algid, const SECItem *sig, unsigned char *dsig, + unsigned int len) + { + SECItem *dsasig = NULL; /* also used for ECDSA */ +- SECStatus rv = SECSuccess; + +- if ((algid != SEC_OID_ANSIX9_DSA_SIGNATURE) && +- (algid != SEC_OID_ANSIX962_EC_PUBLIC_KEY)) { +- if (sig->len != len) { +- PORT_SetError(SEC_ERROR_BAD_DER); +- return SECFailure; ++ /* Safety: Ensure algId is as expected and that signature size is within maxmimums */ ++ if (algid == SEC_OID_ANSIX9_DSA_SIGNATURE) { ++ if (len > DSA_MAX_SIGNATURE_LEN) { ++ goto loser; + } +- +- PORT_Memcpy(dsig, sig->data, sig->len); +- return SECSuccess; ++ } else if (algid == SEC_OID_ANSIX962_EC_PUBLIC_KEY) { ++ if (len > MAX_ECKEY_LEN * 2) { ++ goto loser; ++ } ++ } else { ++ goto loser; + } + +- if (algid == SEC_OID_ANSIX962_EC_PUBLIC_KEY) { +- if (len > MAX_ECKEY_LEN * 2) { +- PORT_SetError(SEC_ERROR_BAD_DER); +- return SECFailure; +- } ++ /* Decode and pad to length */ ++ dsasig = DSAU_DecodeDerSigToLen((SECItem *)sig, len); ++ if (dsasig == NULL) { ++ goto loser; + } +- dsasig = DSAU_DecodeDerSigToLen((SECItem *)sig, len); +- +- if ((dsasig == NULL) || (dsasig->len != len)) { +- rv = SECFailure; +- } else { +- PORT_Memcpy(dsig, dsasig->data, dsasig->len); ++ if (dsasig->len != len) { ++ SECITEM_FreeItem(dsasig, PR_TRUE); ++ goto loser; + } + +- if (dsasig != NULL) +- SECITEM_FreeItem(dsasig, PR_TRUE); +- if (rv == SECFailure) +- PORT_SetError(SEC_ERROR_BAD_DER); +- return rv; ++ PORT_Memcpy(dsig, dsasig->data, len); ++ SECITEM_FreeItem(dsasig, PR_TRUE); ++ ++ return SECSuccess; ++ ++loser: ++ PORT_SetError(SEC_ERROR_BAD_DER); ++ return SECFailure; + } + + const SEC_ASN1Template hashParameterTemplate[] = + { + { SEC_ASN1_SEQUENCE, 0, NULL, sizeof(SECItem) }, + { SEC_ASN1_OBJECT_ID, 0 }, + { SEC_ASN1_SKIP_REST }, + { 0 } +@@ -276,17 +307,17 @@ sec_GetEncAlgFromSigAlg(SECOidTag sigAlg + * + * Returns: SECSuccess if the algorithm was acceptable, SECFailure if the + * algorithm was not found or was not a signing algorithm. + */ + SECStatus + sec_DecodeSigAlg(const SECKEYPublicKey *key, SECOidTag sigAlg, + const SECItem *param, SECOidTag *encalgp, SECOidTag *hashalg) + { +- int len; ++ unsigned int len; + PLArenaPool *arena; + SECStatus rv; + SECItem oid; + SECOidTag encalg; + + PR_ASSERT(hashalg != NULL); + PR_ASSERT(encalgp != NULL); + +@@ -461,58 +492,62 @@ vfy_CreateContext(const SECKEYPublicKey + cx->wincx = wincx; + cx->hasSignature = (sig != NULL); + cx->encAlg = encAlg; + cx->hashAlg = hashAlg; + cx->key = SECKEY_CopyPublicKey(key); + cx->pkcs1RSADigestInfo = NULL; + rv = SECSuccess; + if (sig) { +- switch (type) { +- case rsaKey: +- rv = recoverPKCS1DigestInfo(hashAlg, &cx->hashAlg, +- &cx->pkcs1RSADigestInfo, +- &cx->pkcs1RSADigestInfoLen, +- cx->key, +- sig, wincx); +- break; +- case rsaPssKey: +- sigLen = SECKEY_SignatureLen(key); +- if (sigLen == 0) { +- /* error set by SECKEY_SignatureLen */ +- rv = SECFailure; ++ rv = SECFailure; ++ if (type == rsaKey) { ++ rv = recoverPKCS1DigestInfo(hashAlg, &cx->hashAlg, ++ &cx->pkcs1RSADigestInfo, ++ &cx->pkcs1RSADigestInfoLen, ++ cx->key, ++ sig, wincx); ++ } else { ++ sigLen = checkedSignatureLen(key); ++ /* Check signature length is within limits */ ++ if (sigLen == 0) { ++ /* error set by checkedSignatureLen */ ++ rv = SECFailure; ++ goto loser; ++ } ++ if (sigLen > sizeof(cx->u)) { ++ PORT_SetError(SEC_ERROR_BAD_SIGNATURE); ++ rv = SECFailure; ++ goto loser; ++ } ++ switch (type) { ++ case rsaPssKey: ++ if (sig->len != sigLen) { ++ PORT_SetError(SEC_ERROR_BAD_SIGNATURE); ++ rv = SECFailure; ++ goto loser; ++ } ++ PORT_Memcpy(cx->u.buffer, sig->data, sigLen); ++ rv = SECSuccess; + break; +- } +- if (sig->len != sigLen) { +- PORT_SetError(SEC_ERROR_BAD_SIGNATURE); ++ case ecKey: ++ case dsaKey: ++ /* decodeECorDSASignature will check sigLen == sig->len after padding */ ++ rv = decodeECorDSASignature(encAlg, sig, cx->u.buffer, sigLen); ++ break; ++ default: ++ /* Unreachable */ + rv = SECFailure; +- break; +- } +- PORT_Memcpy(cx->u.buffer, sig->data, sigLen); +- break; +- case dsaKey: +- case ecKey: +- sigLen = SECKEY_SignatureLen(key); +- if (sigLen == 0) { +- /* error set by SECKEY_SignatureLen */ +- rv = SECFailure; +- break; +- } +- rv = decodeECorDSASignature(encAlg, sig, cx->u.buffer, sigLen); +- break; +- default: +- rv = SECFailure; +- PORT_SetError(SEC_ERROR_UNSUPPORTED_KEYALG); +- break; ++ goto loser; ++ } ++ } ++ if (rv != SECSuccess) { ++ goto loser; + } + } + +- if (rv) +- goto loser; +- + /* check hash alg again, RSA may have changed it.*/ + if (HASH_GetHashTypeByOidTag(cx->hashAlg) == HASH_AlgNULL) { + /* error set by HASH_GetHashTypeByOidTag */ + goto loser; + } + /* check the policy on the hash algorithm. Do this after + * the rsa decode because some uses of this function get hash implicitly + * from the RSA signature itself. */ +@@ -645,21 +680,26 @@ VFY_EndWithSignature(VFYContext *cx, SEC + if (cx->hashcx == NULL) { + PORT_SetError(SEC_ERROR_INVALID_ARGS); + return SECFailure; + } + (*cx->hashobj->end)(cx->hashcx, final, &part, sizeof(final)); + switch (cx->key->keyType) { + case ecKey: + case dsaKey: +- dsasig.data = cx->u.buffer; +- dsasig.len = SECKEY_SignatureLen(cx->key); ++ dsasig.len = checkedSignatureLen(cx->key); + if (dsasig.len == 0) { + return SECFailure; + } ++ if (dsasig.len > sizeof(cx->u)) { ++ PORT_SetError(SEC_ERROR_BAD_SIGNATURE); ++ return SECFailure; ++ } ++ dsasig.data = cx->u.buffer; ++ + if (sig) { + rv = decodeECorDSASignature(cx->encAlg, sig, dsasig.data, + dsasig.len); + if (rv != SECSuccess) { + PORT_SetError(SEC_ERROR_BAD_SIGNATURE); + return SECFailure; + } + } +@@ -681,18 +721,23 @@ VFY_EndWithSignature(VFYContext *cx, SEC + cx->params, + &mech); + PORT_DestroyCheapArena(&tmpArena); + if (rv != SECSuccess) { + return SECFailure; + } + + rsasig.data = cx->u.buffer; +- rsasig.len = SECKEY_SignatureLen(cx->key); ++ rsasig.len = checkedSignatureLen(cx->key); + if (rsasig.len == 0) { ++ /* Error set by checkedSignatureLen */ ++ return SECFailure; ++ } ++ if (rsasig.len > sizeof(cx->u)) { ++ PORT_SetError(SEC_ERROR_BAD_SIGNATURE); + return SECFailure; + } + if (sig) { + if (sig->len != rsasig.len) { + PORT_SetError(SEC_ERROR_BAD_SIGNATURE); + return SECFailure; + } + PORT_Memcpy(rsasig.data, sig->data, rsasig.len); +@@ -744,37 +789,42 @@ VFY_End(VFYContext *cx) + static SECStatus + vfy_VerifyDigest(const SECItem *digest, const SECKEYPublicKey *key, + const SECItem *sig, SECOidTag encAlg, SECOidTag hashAlg, + void *wincx) + { + SECStatus rv; + VFYContext *cx; + SECItem dsasig; /* also used for ECDSA */ +- + rv = SECFailure; + + cx = vfy_CreateContext(key, sig, encAlg, hashAlg, NULL, wincx); + if (cx != NULL) { + switch (key->keyType) { + case rsaKey: + rv = verifyPKCS1DigestInfo(cx, digest); ++ /* Error (if any) set by verifyPKCS1DigestInfo */ + break; +- case dsaKey: + case ecKey: ++ case dsaKey: + dsasig.data = cx->u.buffer; +- dsasig.len = SECKEY_SignatureLen(cx->key); ++ dsasig.len = checkedSignatureLen(cx->key); + if (dsasig.len == 0) { ++ /* Error set by checkedSignatureLen */ ++ rv = SECFailure; + break; + } +- if (PK11_Verify(cx->key, &dsasig, (SECItem *)digest, cx->wincx) != +- SECSuccess) { ++ if (dsasig.len > sizeof(cx->u)) { + PORT_SetError(SEC_ERROR_BAD_SIGNATURE); +- } else { +- rv = SECSuccess; ++ rv = SECFailure; ++ break; ++ } ++ rv = PK11_Verify(cx->key, &dsasig, (SECItem *)digest, cx->wincx); ++ if (rv != SECSuccess) { ++ PORT_SetError(SEC_ERROR_BAD_SIGNATURE); + } + break; + default: + break; + } + VFY_DestroyContext(cx, PR_TRUE); + } + return rv; + diff --git a/gnu/packages/patches/racket-minimal-backport-1629887.patch b/gnu/packages/patches/racket-minimal-backport-1629887.patch deleted file mode 100644 index aa060ef5aa..0000000000 --- a/gnu/packages/patches/racket-minimal-backport-1629887.patch +++ /dev/null @@ -1,28 +0,0 @@ -From fb1a6ab205fd63a46669a463931af473e2ac0c87 Mon Sep 17 00:00:00 2001 -From: Matthew Flatt <mflatt@racket-lang.org> -Date: Sat, 21 Aug 2021 15:29:59 -0600 -Subject: [PATCH] setup/variant: recognize starter executables - -Related to #3969 - -(cherry picked from commit 1629887071fe3cc8fe8af0a7aa0d3912509cb058) ---- - racket/collects/setup/variant.rkt | 2 +- - 1 file changed, 1 insertion(+), 1 deletion(-) - -diff --git a/racket/collects/setup/variant.rkt b/racket/collects/setup/variant.rkt -index 81da6f5701..b23131e481 100644 ---- a/racket/collects/setup/variant.rkt -+++ b/racket/collects/setup/variant.rkt -@@ -25,7 +25,7 @@ - (and (file-exists? f) - (with-input-from-file f - (lambda () -- (define m (regexp-match #rx#"bINARy tYPe:..(.)" -+ (define m (regexp-match #rx#"bINARy tYPe:e?..(.)" - (current-input-port))) - (cond - [(not m) '3m] --- -2.30.2 - diff --git a/gnu/packages/patches/u-boot-rk3399-enable-emmc-phy.patch b/gnu/packages/patches/u-boot-rk3399-enable-emmc-phy.patch new file mode 100644 index 0000000000..f14a9ce104 --- /dev/null +++ b/gnu/packages/patches/u-boot-rk3399-enable-emmc-phy.patch @@ -0,0 +1,26 @@ +adapting commit ac804143cf ("mmc: rockchip_sdhci: add phy and clock +config for rk3399") to fix the issue "Not found emmc phy device". + +Signed-off-by: Yifeng Zhao <yifeng.zhao@rock-chips.com> +--- + + arch/arm/dts/rk3399-u-boot.dtsi | 4 ++++ + 1 file changed, 4 insertions(+) + +diff --git a/arch/arm/dts/rk3399-u-boot.dtsi b/arch/arm/dts/rk3399-u-boot.dtsi +index 73922c328a..716b9a433a 100644 +--- a/arch/arm/dts/rk3399-u-boot.dtsi ++++ b/arch/arm/dts/rk3399-u-boot.dtsi +@@ -88,6 +88,10 @@ + u-boot,dm-pre-reloc; + }; + ++&emmc_phy { ++ u-boot,dm-pre-reloc; ++}; ++ + &grf { + u-boot,dm-pre-reloc; + }; +-- +2.17.1 diff --git a/gnu/packages/patches/yggdrasil-extra-config.patch b/gnu/packages/patches/yggdrasil-extra-config.patch index c21ca29a84..bd4bea7b9f 100644 --- a/gnu/packages/patches/yggdrasil-extra-config.patch +++ b/gnu/packages/patches/yggdrasil-extra-config.patch @@ -1,27 +1,39 @@ +From 779f980451d20079b34812f7006f2d7230738ad0 Mon Sep 17 00:00:00 2001 +From: csepp <raingloom@riseup.net> +Date: Wed, 3 Nov 2021 21:14:54 +0100 +Subject: [PATCH] add extra config file option to yggdrasil command + +This is useful in Guix and Nix, because one config file can come +from the world-readable store and another can be placed directly +into /etc with much stricter permissions. +--- + cmd/yggdrasil/main.go | 29 ++++++++++++++++++++++------- + 1 file changed, 22 insertions(+), 7 deletions(-) + diff --git a/cmd/yggdrasil/main.go b/cmd/yggdrasil/main.go -index 813e950..08d35cc 100644 +index 58b8230..b9df98a 100644 --- a/cmd/yggdrasil/main.go +++ b/cmd/yggdrasil/main.go -@@ -40,11 +40,12 @@ type node struct { - admin module.Module // admin.AdminSocket +@@ -43,11 +43,12 @@ type node struct { + admin *admin.AdminSocket } --func readConfig(useconf *bool, useconffile *string, normaliseconf *bool) *config.NodeConfig { -+func readConfig(useconf *bool, useconffile *string, extraconffile *string, normaliseconf *bool) *config.NodeConfig { +-func readConfig(log *log.Logger, useconf bool, useconffile string, normaliseconf bool) *config.NodeConfig { ++func readConfig(log *log.Logger, useconf bool, useconffile string, extraconffile string, normaliseconf bool) *config.NodeConfig { // Use a configuration file. If -useconf, the configuration will be read // from stdin. If -useconffile, the configuration will be read from the // filesystem. var conf []byte + var extraconf []byte var err error - if *useconffile != "" { + if useconffile != "" { // Read the file from the filesystem -@@ -56,6 +57,21 @@ func readConfig(useconf *bool, useconffile *string, normaliseconf *bool) *config +@@ -59,6 +60,21 @@ func readConfig(log *log.Logger, useconf bool, useconffile string, normaliseconf if err != nil { panic(err) } -+ if *extraconffile != "" { -+ extraconf, err = ioutil.ReadFile(*extraconffile); ++ if extraconffile != "" { ++ extraconf, err = ioutil.ReadFile(extraconffile); + } + if err != nil { + panic(err) @@ -30,7 +42,7 @@ index 813e950..08d35cc 100644 + // then parse the configuration we loaded above on top of it. The effect + // of this is that any configuration item that is missing from the provided + // configuration will use a sane default. -+ cfg := config.GenerateConfig() ++ cfg := defaults.GenerateConfig() + var confs [2][]byte + confs[0]=conf + confs[1]=extraconf @@ -38,7 +50,7 @@ index 813e950..08d35cc 100644 // If there's a byte order mark - which Windows 10 is now incredibly fond of // throwing everywhere when it's converting things into UTF-16 for the hell // of it - remove it and decode back down into UTF-8. This is necessary -@@ -69,11 +85,6 @@ func readConfig(useconf *bool, useconffile *string, normaliseconf *bool) *config +@@ -72,11 +88,6 @@ func readConfig(log *log.Logger, useconf bool, useconffile string, normaliseconf panic(err) } } @@ -46,11 +58,11 @@ index 813e950..08d35cc 100644 - // then parse the configuration we loaded above on top of it. The effect - // of this is that any configuration item that is missing from the provided - // configuration will use a sane default. -- cfg := config.GenerateConfig() +- cfg := defaults.GenerateConfig() var dat map[string]interface{} if err := hjson.Unmarshal(conf, &dat); err != nil { panic(err) -@@ -112,6 +123,7 @@ func readConfig(useconf *bool, useconffile *string, normaliseconf *bool) *config +@@ -136,6 +147,7 @@ func readConfig(log *log.Logger, useconf bool, useconffile string, normaliseconf if err = mapstructure.Decode(dat, &cfg); err != nil { panic(err) } @@ -58,7 +70,15 @@ index 813e950..08d35cc 100644 return cfg } -@@ -164,6 +176,7 @@ func main() { +@@ -192,6 +204,7 @@ type yggArgs struct { + getaddr bool + getsnet bool + useconffile string ++ extraconffile string + logto string + loglevel string + } +@@ -200,6 +213,7 @@ func getArgs() yggArgs { genconf := flag.Bool("genconf", false, "print a new config to stdout") useconf := flag.Bool("useconf", false, "read HJSON/JSON config from stdin") useconffile := flag.String("useconffile", "", "read HJSON/JSON config from specified file path") @@ -66,21 +86,23 @@ index 813e950..08d35cc 100644 normaliseconf := flag.Bool("normaliseconf", false, "use in combination with either -useconf or -useconffile, outputs your configuration normalised") confjson := flag.Bool("json", false, "print configuration from -genconf or -normaliseconf as JSON instead of HJSON") autoconf := flag.Bool("autoconf", false, "automatic mode (dynamic IP, peer with IPv6 neighbors)") -@@ -187,7 +200,7 @@ func main() { - cfg = config.GenerateConfig() - case *useconffile != "" || *useconf: +@@ -213,6 +227,7 @@ func getArgs() yggArgs { + genconf: *genconf, + useconf: *useconf, + useconffile: *useconffile, ++ extraconffile: *extraconffile, + normaliseconf: *normaliseconf, + confjson: *confjson, + autoconf: *autoconf, +@@ -265,7 +280,7 @@ func run(args yggArgs, ctx context.Context, done chan struct{}) { + cfg = defaults.GenerateConfig() + case args.useconffile != "" || args.useconf: // Read the configuration from either stdin or from the filesystem -- cfg = readConfig(useconf, useconffile, normaliseconf) -+ cfg = readConfig(useconf, useconffile, extraconffile, normaliseconf) +- cfg = readConfig(logger, args.useconf, args.useconffile, args.normaliseconf) ++ cfg = readConfig(logger, args.useconf, args.useconffile, args.extraconffile, args.normaliseconf) // If the -normaliseconf option was specified then remarshal the above // configuration and print it back to stdout. This lets the user update // their configuration file with newly mapped names (like above) or to -@@ -332,7 +345,7 @@ func main() { - goto exit - case _ = <-r: - if *useconffile != "" { -- cfg = readConfig(useconf, useconffile, normaliseconf) -+ cfg = readConfig(useconf, useconffile, extraconffile, normaliseconf) - logger.Infoln("Reloading configuration from", *useconffile) - n.core.UpdateConfig(cfg) - n.tuntap.UpdateConfig(cfg) +-- +2.33.1 + diff --git a/gnu/packages/perl-check.scm b/gnu/packages/perl-check.scm index d62fd72d38..bcdef685cd 100644 --- a/gnu/packages/perl-check.scm +++ b/gnu/packages/perl-check.scm @@ -840,14 +840,14 @@ memory_cycle_ok( $object ); (define-public perl-test-mockmodule (package (name "perl-test-mockmodule") - (version "0.171.0") + (version "0.177.0") (source (origin (method url-fetch) (uri (string-append "mirror://cpan/authors/id/G/GF/GFRANKS/" "Test-MockModule-v" version ".tar.gz")) (sha256 - (base32 "1arqgb1773zym5dqlwm6kz48bfrccjhb5bjfsif0vkalwq2gvm7b")))) + (base32 "0i8hiw9r2kak8kgp2qabr0cnnpp1yg1sddm781nhfxpavi4pmnhv")))) (build-system perl-build-system) (native-inputs `(("perl-module-build" ,perl-module-build) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index 933ec5928a..c90ff7f46f 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -9512,7 +9512,7 @@ a functional interface.") (define-public perl-sub-exporter (package (name "perl-sub-exporter") - (version "0.987") + (version "0.988") (source (origin (method url-fetch) @@ -9521,7 +9521,7 @@ a functional interface.") version ".tar.gz")) (sha256 (base32 - "1ml3n1ck4ln9qjm2mcgkczj1jb5n1fkscz9c4x23v4db0glb4g2l")))) + "03040vk227icdkb0hvxplck2y6rglj67s1rgf12z3465ss3lhci3")))) (build-system perl-build-system) (propagated-inputs `(("perl-data-optlist" ,perl-data-optlist) @@ -11570,14 +11570,14 @@ files, using JSON::PP and/or CPAN::Meta::YAML.") (define-public perl-scalar-list-utils (package (name "perl-scalar-list-utils") - (version "1.56") + (version "1.60") (source (origin (method url-fetch) (uri (string-append "mirror://cpan/authors/id/P/PE/PEVANS/" "Scalar-List-Utils-" version ".tar.gz")) (sha256 - (base32 "0nxb29x7i2w6kjxq188n131b56bsqj1ykrxjcjp6sgpv81ym7f0m")))) + (base32 "01szp3agmww6gj3hwqbpi8csn9675qcc7dw828r8y00z0bcbm1f6")))) (build-system perl-build-system) (home-page "https://metacpan.org/release/Scalar-List-Utils") (synopsis "Common Scalar and List utility subroutines") diff --git a/gnu/packages/php.scm b/gnu/packages/php.scm index 44eab76918..b81fae1f74 100644 --- a/gnu/packages/php.scm +++ b/gnu/packages/php.scm @@ -5,6 +5,7 @@ ;;; Copyright © 2018 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2019 Oleg Pykhalov <go.wigust@gmail.com> ;;; Copyright © 2020 Maxim Cournoyer <maxim.cournoyer@gmail.com> +;;; Copyright © 2021 Efraim Flashner <efraim@flashner.co.il> ;;; ;;; This file is part of GNU Guix. ;;; @@ -60,7 +61,7 @@ (define-public php (package (name "php") - (version "7.4.25") + (version "7.4.26") (home-page "https://secure.php.net/") (source (origin (method url-fetch) @@ -68,7 +69,7 @@ "php-" version ".tar.xz")) (sha256 (base32 - "02iw75niazf3zh3ry15k5yjy6ivg49rwzlr8g8w49rgyszqmi9qj")) + "1y0f1xgfi8cks6npdhrycg8r9g3q0pikqgf5h4xafpy8znmb61g3")) (patches (search-patches "php-bug-74093-test.patch")) (modules '((guix build utils))) (snippet @@ -93,7 +94,7 @@ (list (with "--with-bz2" "bzip2") (with "--with-curl" "curl") (with "--with-gdbm" "gdbm") - (with "--with-gettext" "glibc") ; libintl.h + (with "--with-gettext" "libc") ; libintl.h (with "--with-gmp" "gmp") (with "--with-ldap" "openldap") (with "--with-ldap-sasl" "cyrus-sasl") @@ -367,7 +368,6 @@ ("cyrus-sasl" ,cyrus-sasl) ("gd" ,gd) ("gdbm" ,gdbm) - ("glibc" ,glibc) ("gmp" ,gmp) ("gnutls" ,gnutls) ("icu4c" ,icu4c) diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index 14a35980b5..cb598b0344 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2019 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2019, 2021 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2019, 2020, 2021 Maxim Cournoyer <maxim.cournoyer@gmail.com> @@ -1858,3 +1858,30 @@ asynchronous HTTP requests it is a bit harder (at least at the beginning). The purpose of this package is to provide an easy way to test asynchronous HTTP requests.") (license license:expat))) + +(define-public python-xunitparser + (package + (name "python-xunitparser") + (version "1.3.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "xunitparser" version)) + (sha256 + (base32 "05amn9yik0mxg89iiprkb6lrmc7rlccgvwajrpyfi6zbp8mjdsgn")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; See https://github.com/laurentb/xunitparser/pull/11 + (add-after 'unpack 'fix-test-suite + (lambda _ + (substitute* "xunitparser.py" + (("(^ +)self.stderr = None" m indent) + (string-append m "\n" indent "self._cleanup = False\n")))))))) + (home-page "http://git.p.engu.in/laurentb/xunitparser/") + (synopsis "Read JUnit/XUnit XML files and map them to Python objects") + (description "xunitparser reads a JUnit/XUnit XML file and maps it to +Python objects. It tries to use the objects available in the standard +@code{unittest} module.") + (license license:expat))) diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index 811650de24..f9af939781 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -46,6 +46,7 @@ ;;; Copyright © 2021 Pradana Aumars <paumars@courrier.dev> ;;; Copyright © 2021 Arun Isaac <arunisaac@systemreboot.net> ;;; Copyright © 2021 jgart <jgart@dismail.de> +;;; Copyright © 2021 Alice Brenon <alice.brenon@ens-lyon.fr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -80,6 +81,7 @@ #:use-module (gnu packages groff) #:use-module (gnu packages libevent) #:use-module (gnu packages libffi) + #:use-module (gnu packages node) #:use-module (gnu packages pkg-config) #:use-module (gnu packages python) #:use-module (gnu packages python-build) @@ -87,6 +89,7 @@ #:use-module (gnu packages python-crypto) #:use-module (gnu packages python-science) #:use-module (gnu packages python-xyz) + #:use-module (gnu packages qt) #:use-module (gnu packages serialization) #:use-module (gnu packages sphinx) #:use-module (gnu packages texinfo) @@ -5944,6 +5947,46 @@ Agent is a web crawler. It uses the list of registered robots from using a pure Python implementation.") (license license:bsd-3))) +(define-public python-pyjsparser + (package + (name "python-pyjsparser") + (version "2.7.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyjsparser" version)) + (sha256 + (base32 "0ycmf9fsvwliqmm1n6sfz7x71y7i2kbfgn39d8lsbiccfxmxlq5y")))) + (build-system python-build-system) + (home-page "https://github.com/PiotrDabkowski/pyjsparser") + (synopsis "Fast JavaScript parser") + (description "This package provides a fast JavaScript parser (based on +esprima.js)") + (license license:expat))) + +(define-public python-js2py + (package + (name "python-js2py") + (version "0.71") + (source + (origin + (method url-fetch) + (uri (pypi-uri "Js2Py" version)) + (sha256 + (base32 "1kkzkys6dfcbdv51vqxr9cmak350ab4mmykb8dysx60lvl4i06x4")))) + (build-system python-build-system) + (arguments '(#:tests? #false)) ; none included + (propagated-inputs + `(("python-pyjsparser" ,python-pyjsparser) + ("python-six" ,python-six) + ("python-tzlocal" ,python-tzlocal))) + (home-page "https://github.com/PiotrDabkowski/Js2Py") + (synopsis "JavaScript to Python translator") + (description + "This package provides a JavaScript to Python translator and a JavaScript +interpreter written in pure Python.") + (license license:expat))) + (define-public python-http-ece (package (name "python-http-ece") @@ -5981,26 +6024,26 @@ Encoding for HTTP.") (define-public python-cloudscraper (package (name "python-cloudscraper") - (version "1.2.48") + (version "1.2.58") (source (origin - (method url-fetch) - (uri (pypi-uri "cloudscraper" version)) + (method git-fetch) + (uri (git-reference + (url "https://github.com/VeNoMouS/cloudscraper") + ;; Corresponds to 1.2.58 + (commit "f3a3d067ea8b5238e9a0948aed0c3fa0d9c29b96"))) (sha256 - (base32 "0qjxzb0z5bprvmdhx42ayqhlhi2h49d9dwc0vvycj817s71f2sxv")) + (base32 "18fbp086imabjxly04rrchbf6n6m05bpd150zxbw7z2w3mjnpsqd")) (modules '((guix build utils))) (snippet '(with-directory-excursion "cloudscraper" (for-each delete-file - '("captcha/2captcha.py" - "captcha/9kw.py" - "captcha/anticaptcha.py" - "captcha/deathbycaptcha.py")) + '("captcha/9kw.py" + "captcha/anticaptcha.py")) (substitute* "__init__.py" ;; Perhaps it's a joke, but don't promote proprietary software. (("([Th]is feature is not available) in the .*'" _ prefix) - (string-append prefix ".'"))) - #t)))) + (string-append prefix ".'"))))))) (build-system python-build-system) (arguments `(#:phases @@ -6011,12 +6054,25 @@ Encoding for HTTP.") (lambda _ (with-directory-excursion "cloudscraper" (for-each delete-file - '("interpreters/js2py.py" - "interpreters/v8.py"))) - #t))))) + '("interpreters/v8.py"))))) + (add-after 'unpack 'fix-references + (lambda _ + (substitute* "cloudscraper/interpreters/nodejs.py" + (("'node'") + (string-append "'" (which "node") "'"))))) + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "pytest" "-vv" + "-k" "not test_getCookieString_challenge_js_challenge1_16_05_2020"))))))) + (inputs + `(("node" ,node))) (propagated-inputs - `(("python-requests" ,python-requests) + `(("python-js2py" ,python-js2py) + ("python-polling2" ,python-polling2) + ("python-requests" ,python-requests) ("python-requests-toolbelt" ,python-requests-toolbelt-0.9.1) + ("python-responses" ,python-responses) ("python-pyparsing" ,python-pyparsing-2.4.7))) (native-inputs `(("python-pytest" ,python-pytest))) @@ -6312,6 +6368,48 @@ Only the RGB colorspace is supported. Conversion to/from the HSL colorspace can be handled by the @code{colorsys} module in the Python standard library.") (license license:bsd-3))) +(define-public python-woob + (package + (name "python-woob") + (version "3.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "woob" version)) + (sha256 + (base32 "09hpxy5zhn2b8li0xjf3zd7s46lawb0315p5mdcsci3bj3s4v1j7")))) + (build-system python-build-system) + ;; A small number of tests for optional applications fails due to missing + ;; inputs. + (arguments `(#:tests? #f)) + (propagated-inputs + `(("python-babel" ,python-babel) + ("python-colorama" ,python-colorama) + ("python-cssselect" ,python-cssselect) + ("python-dateutil" ,python-dateutil) + ("python-feedparser" ,python-feedparser) + ("python-html2text" ,python-html2text) + ("python-lxml" ,python-lxml) + ("python-pillow" ,python-pillow) + ("python-prettytable" ,python-prettytable) + ("python-pyqt" ,python-pyqt) + ("python-pyyaml" ,python-pyyaml) + ("python-requests" ,python-requests) + ("python-six" ,python-six) + ("python-unidecode" ,python-unidecode))) + (native-inputs + `(("python-coverage" ,python-coverage) + ("python-flake8" ,python-flake8) + ("python-nose" ,python-nose) + ("python-selenium" ,python-selenium) + ("python-xunitparser" ,python-xunitparser))) + (home-page "https://woob.tech/") + (synopsis "Woob, Web Outside Of Browsers") + (description "Woob is a collection of applications able to interact with +websites, without requiring the user to open them in a browser. It also +provides well-defined APIs to talk to websites lacking one.") + (license license:lgpl3+))) + (define-public python-flask-combo-jsonapi (package (name "python-flask-combo-jsonapi") @@ -6350,3 +6448,32 @@ It tries to combine the power of Flask-Restless with the flexibility of Flask-RESTful to quickly build APIs that fit the complexity of existing real-life projects with legacy data and diverse storage providers.") (license license:expat))) + +(define-public python-mwparserfromhell + (package + (name "python-mwparserfromhell") + (version "0.6.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "mwparserfromhell" version)) + (sha256 + (base32 "0zh9zaqbac18s7mivqk8am9xw97lfkgcj9hhxj0d4208pkqpkmqs")))) + (build-system python-build-system) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-pytest-runner" ,python-pytest-runner))) + (home-page "https://github.com/earwig/mwparserfromhell") + (synopsis "Python parser for MediaWiki wikicode") + (description + "The MediaWiki Parser From Hell is a python library package that provides +a parser for MediaWiki. + +It exposes parses as normal string objects with additional methods giving +access to the special Wikicode features it contains (hyperlinks, tags, +templates…). The parser doesn't interpolate strings at all, it remains at a +purely formal level. + +Full documentation may be found at +@uref{https://mwparserfromhell.readthedocs.io, ReadTheDocs}") + (license license:expat))) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index a596b00bbb..a1e7f609df 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -63,7 +63,7 @@ ;;; Copyright © 2019, 2020 Alex Griffin <a@ajgrf.com> ;;; Copyright © 2019, 2020, 2021 Pierre Langlois <pierre.langlois@gmx.com> ;;; Copyright © 2019 Jacob MacDonald <jaccarmac@gmail.com> -;;; Copyright © 2019, 2020 Giacomo Leidi <goodoldpaul@autistici.org> +;;; Copyright © 2019, 2020, 2021 Giacomo Leidi <goodoldpaul@autistici.org> ;;; Copyright © 2019 Wiktor Żelazny <wzelazny@vurv.cz> ;;; Copyright © 2019, 2020, 2021 Tanguy Le Carrour <tanguy@bioneland.org> ;;; Copyright © 2019, 2021 Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> @@ -111,6 +111,7 @@ ;;; Copyright © 2021 Felix Gruber <felgru@posteo.net> ;;; Copyright © 2021 Sébastien Lerique <sl@eauchat.org> ;;; Copyright © 2021 Raphaël Mélotte <raphael.melotte@mind.be> +;;; Copyright © 2021 ZmnSCPxj <ZmnSCPxj@protonmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -142,6 +143,7 @@ #:use-module (gnu packages crypto) #:use-module (gnu packages databases) #:use-module (gnu packages dbm) + #:use-module (gnu packages django) #:use-module (gnu packages djvu) #:use-module (gnu packages docker) #:use-module (gnu packages enchant) @@ -536,6 +538,28 @@ It indexes documents and provides a search interface for retrieving documents that best match text queries.") (license license:expat))) +(define-public python-mrkd + (package + (name "python-mrkd") + (version "0.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "mrkd" version)) + (sha256 + (base32 "1bvaqbna1ihb4y2mv9pmvqcq3r9j6lwbbii99dani8lxx4dqqvs5")))) + (build-system python-build-system) + (propagated-inputs + `(("python-jinja2" ,python-jinja2) + ("python-mistune" ,python-mistune) + ("python-pygments" ,python-pygments))) + (home-page "https://pypi.org/project/mrkd/") + (synopsis "Python Markdown implementation") + (description + "@code{mrkd} writes man pages using Markdown, and convert them to Roff or +HTML") + (license license:bsd-3))) + (define-public python-mkdocs (package (name "python-mkdocs") @@ -2939,6 +2963,28 @@ existing ones.") ;; Tests don't work with python2. #:tests? #f))))) +(define-public python-polling2 + (package + (name "python-polling2") + (version "0.5.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "polling2" version)) + (sha256 + (base32 "0hp3238fv6k1qk43gv4jwnv1mwlkmx33akbj560b9nvsry1dmdwh")))) + (build-system python-build-system) + (arguments '(#:tests? #false)) ; no tests included + (native-inputs + `(("python-mock" ,python-mock) + ("python-pytest" ,python-pytest) + ("python-pytest-runner" ,python-pytest-runner))) + (home-page "https://github.com/ddmee/polling2") + (synopsis "Polling utility with many configurable options") + (description "Polling2 is a utility used to wait for a function to return +a certain expected condition.") + (license license:expat))) + (define-public python-poyo (package (name "python-poyo") @@ -4062,14 +4108,14 @@ logging and tracing of the execution.") (define-public python-daemon (package (name "python-daemon") - (version "2.2.3") + (version "2.3.0") (source (origin (method url-fetch) (uri (pypi-uri "python-daemon" version)) (sha256 (base32 - "09fcjdjzk9ywmpnrj62iyxqgcygzdafsz41qlrk2dknzbagcmzmg")))) + "1bxfn2bq56sd4w0nm9mqy8y0905m7fc8vmhnjxlrf49vcbqr7adx")))) (build-system python-build-system) (arguments `(#:phases @@ -4084,9 +4130,11 @@ logging and tracing of the execution.") (propagated-inputs `(("python-lockfile" ,python-lockfile))) (native-inputs - `(("python-unittest2" ,python-unittest2) + `(("python-coverage" ,python-coverage) + ("python-unittest2" ,python-unittest2) ("python-testtools" ,python-testtools) ("python-testscenarios" ,python-testscenarios) + ("python-twine" ,python-twine) ("python-mock" ,python-mock) ("python-docutils" ,python-docutils))) (home-page "https://pagure.io/python-daemon/") @@ -4829,29 +4877,32 @@ which can produce feeds in RSS 2.0, RSS 0.91, and Atom formats.") (define-public python2-feedgenerator (package-with-python2 python-feedgenerator)) -(define-public python-jsonrpc-server +(define-public python-lsp-jsonrpc (package - (name "python-jsonrpc-server") - (version "0.4.0") + (name "python-lsp-jsonrpc") + (version "1.0.0") (source (origin (method url-fetch) - (uri (pypi-uri "python-jsonrpc-server" version)) + (uri (pypi-uri "python-lsp-jsonrpc" version)) (sha256 (base32 - "1585ybn3djvx5r5zbxkzlhz2wb1d47y4wrfwaxdyq0gi87jl7ib2")))) + "1gb0fsamxndhplx25v8m0b3k7aknzy454fpa0qsqsqnv6c3igv3v")))) (build-system python-build-system) - (propagated-inputs + (native-inputs `(("python-mock" ,python-mock) - ("python-pytest" ,python-pytest) - ("python-ujson" ,python-ujson))) - (home-page - "https://github.com/palantir/python-jsonrpc-server") + ("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-ujson" ,python-ujson))) + (home-page "https://github.com/python-lsp/python-lsp-jsonrpc") (synopsis "JSON RPC 2.0 server library") (description "This package provides a JSON RPC 2.0 server library for Python.") (license license:expat))) +(define-public python-jsonrpc-server + (deprecated-package "python-jsonrpc-server" python-lsp-jsonrpc)) + (define-public python-pydantic (package (name "python-pydantic") @@ -4927,29 +4978,23 @@ errors when data is invalid.") Server (PLS).") (license license:expat))) -(define-public python-language-server +(define-public python-lsp-server (package - (name "python-language-server") - (version "0.36.2") + (name "python-lsp-server") + (version "1.3.1") (source (origin (method url-fetch) - (uri (pypi-uri "python-language-server" version)) + (uri (pypi-uri "python-lsp-server" version)) (sha256 (base32 - "1c0pnk2aibfhfaanrs0a5gkabkvz81gj20z7r0152b7fcx5ci14r")))) + "15075a5irjxh55wcdf25hllz9c42byxc4770cmwgb480k1dm8scq")))) (build-system python-build-system) (arguments `(#:phases (modify-phases %standard-phases - (add-after 'unpack 'relax-deps - (lambda _ - (substitute* "setup.py" (("pycodestyle>=2.6.0,<2.7.0") - "pycodestyle")) - (substitute* "setup.py" (("pyflakes>=2.2.0,<2.3.0") "pyflakes")) - #t)) (add-before 'check 'set-HOME - (lambda _ (setenv "HOME" "/tmp") #t)) + (lambda _ (setenv "HOME" "/tmp"))) (replace 'check (lambda _ ;; Disable failing test. @@ -4962,7 +5007,7 @@ Server (PLS).") ("python-flake8" ,python-flake8) ("python-future" ,python-future) ("python-jedi" ,python-jedi) - ("python-jsonrpc-server" ,python-jsonrpc-server) + ("python-lsp-jsonrpc" ,python-lsp-jsonrpc) ("python-pluggy" ,python-pluggy) ("python-pycodestyle" ,python-pycodestyle) ("python-pyflakes" ,python-pyflakes) @@ -4983,12 +5028,15 @@ Server (PLS).") (home-page "https://github.com/palantir/python-language-server") (synopsis "Python implementation of the Language Server Protocol") (description - "The Python Language Server (pyls) is an implementation of the Python 3 -language specification for the Language Server Protocol (LSP). This tool is -used in text editing environments to provide a complete and integrated -feature-set for programming Python effectively.") +"The Python Language Server @command{pylsp} is an implementation of the +Python 3 language specification for the Language Server Protocol (LSP). +This tool is used in text editing environments to provide a complete +and integrated feature-set for programming Python effectively.") (license license:expat))) +(define-public python-language-server + (deprecated-package "python-language-server" python-lsp-server)) + (define-public python-pathspec (package (name "python-pathspec") @@ -5959,19 +6007,31 @@ parse and apply unified diffs. It has features such as: (define-public python-numpydoc (package (name "python-numpydoc") - (version "0.8.0") + (version "1.1.0") (source (origin (method url-fetch) (uri (pypi-uri "numpydoc" version)) (sha256 (base32 - "1zazxg3m8j4fksv3f7v7vpf4bj9qb1vj3r326am0vdip141vzx31")))) + "13j4fvy2p7lc8sn00sxvs0jb19vicaznfgx4cphv9jgxgz5xcvy3")))) (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? inputs outputs #:allow-other-keys) + (when tests? + (add-installed-pythonpath inputs outputs) + (invoke "pytest" "-v" "numpydoc/tests" + ;; TODO: unclear why these fail. + "-k" "not test_MyClass and not test_my_function"))))))) (propagated-inputs `(("python-sphinx" ,python-sphinx))) (native-inputs - `(("python-nose" ,python-nose))) + `(("python-matplotlib" ,python-matplotlib) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov))) (home-page "https://pypi.org/project/numpydoc/") (synopsis "Numpy's Sphinx extensions") @@ -5984,6 +6044,15 @@ parse and apply unified diffs. It has features such as: (let ((base (package-with-python2 (strip-python2-variant python-numpydoc)))) (package/inherit base + ;; This is the last version to support Python 2 + (version "0.9.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "numpydoc" version)) + (sha256 + (base32 + "09x6l1a4dcvj7001bvcmcayg1nwqwhaxlwbp6kzj9qrk57lqx3z0")))) (propagated-inputs `(("python2-jinja2" ,python2-jinja2) ,@(package-propagated-inputs base)))))) @@ -7498,10 +7567,21 @@ PNG, PostScript, PDF, and SVG file output.") for the average programmer, and to popularize decorators usage giving examples of useful decorators, such as memoize, tracing, redirecting_stdout, locked, etc. The core of this module is a decorator factory.") - (license license:expat))) + (license license:expat) + (properties `((python2-variant . ,(delay python2-decorator)))))) +;; Version 5 does not support Python 2 (define-public python2-decorator - (package-with-python2 python-decorator)) + (package + (inherit (package-with-python2 + (strip-python2-variant python-decorator))) + (version "4.3.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "decorator" version)) + (sha256 + (base32 "0308djallnh00v112y5b7nadl657ysmkp6vc8xn51d6yzc9zm7n3")))))) (define-public python-drmaa (package @@ -8555,8 +8635,7 @@ callback signature using a prototype function.") (substitute* "IPython/sphinxext/ipython_directive.py" ((".*import datetime") "") ((".*datetime.datetime.now\\(\\)") "") - (("%timeit") "# %timeit")) - #t)) + (("%timeit") "# %timeit")))) ;; Tests can only be run after the library has been installed and not ;; within the source directory. (delete 'check) @@ -8570,8 +8649,7 @@ callback signature using a prototype function.") ;; We only test the core because one of the other tests ;; tries to import ipykernel. (invoke "python" "IPython/testing/iptest.py" - "-v" "IPython/core/tests")) - #t))) + "-v" "IPython/core/tests"))))) (add-before 'check 'fix-tests (lambda* (#:key inputs #:allow-other-keys) (substitute* "./IPython/utils/_process_posix.py" @@ -8586,8 +8664,7 @@ callback signature using a prototype function.") (delete-file "IPython/core/tests/test_interactiveshell.py") ;; AttributeError: module 'matplotlib_inline' has no ;; attribute 'backend_inline' - (delete-file "IPython/core/tests/test_pylabtools.py") - #t))))) + (delete-file "IPython/core/tests/test_pylabtools.py")))))) (home-page "https://ipython.org") (synopsis "IPython is a tool for interactive computing in Python") (description @@ -8794,7 +8871,7 @@ distance between two or more sequences by many algorithms.") (define-public python-urwidtrees (package (name "python-urwidtrees") - (version "1.0.2") + (version "1.0.3") (source (origin (method git-fetch) @@ -8806,11 +8883,10 @@ distance between two or more sequences by many algorithms.") (file-name (git-file-name name version)) (sha256 (base32 - "1n1kpidvkdnsqyb82vlvk78gmly96kh8351lqxn2pzgwwns6fml2")))) + "1y1vysx7jg0vbrarlsykhf7nmr8fc6k1fva1q3i98xq2m30s6r68")))) (build-system python-build-system) (arguments - '(#:use-setuptools? #f - #:tests? #f)) ; no tests + '(#:tests? #f)) ; no tests (propagated-inputs `(("python-urwid" ,python-urwid))) (home-page "https://github.com/pazz/urwidtrees") (synopsis "Tree widgets for urwid") @@ -12484,37 +12560,6 @@ programmatically with command-line parsers like @code{getopt} and (define-public python2-docopt (package-with-python2 python-docopt)) -(define-public python-dotenv - (package - (name "python-dotenv") - (version "0.19.1") - (source - (origin - (method url-fetch) - (uri (pypi-uri "python-dotenv" version)) - (sha256 - (base32 "1f64ni36j5khzhfn01z7f53kg5byrgflm4g6hck6d56lr1f1iy0l")))) - (build-system python-build-system) - (native-inputs - `(("python-ipython" ,python-ipython) - ("python-mock" ,python-mock) - ("python-pytest" ,python-pytest) - ("python-sh" ,python-sh))) - (propagated-inputs - `(("python-click" ,python-click))) - (arguments - `(#:phases - (modify-phases %standard-phases - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (invoke "pytest"))))))) - (home-page "https://github.com/theskumar/python-dotenv") - (synopsis "Environment variables configuration tool") - (description "Python-dotenv reads key-value pairs from a .env file and can -set them as environment variables.") - (license license:bsd-3))) - (define-public python-pythondialog (package (name "python-pythondialog") @@ -12787,13 +12832,13 @@ the construction of PyQt/PySide stylesheets.") (define-public python-click-threading (package (name "python-click-threading") - (version "0.4.4") + (version "0.5.0") (source (origin (method url-fetch) (uri (pypi-uri "click-threading" version)) (sha256 (base32 - "1rsxc2fbkxlhwhlmxsdjzq3spn284l6rvjfcz9mbb17ibgdgmc5j")))) + "0f9lmxwcq0y9lb8w0whbni7gwy12gbv74h1igh85qn9aq0iydkxd")))) (build-system python-build-system) (propagated-inputs `(("python-click" ,python-click))) @@ -14440,6 +14485,53 @@ checking library.") ,python2-backport-ssl-match-hostname) ,@(package-propagated-inputs whoosh)))))) +(define-public python-codespell + (package + (name "python-codespell") + (version "2.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "codespell" version)) + (sha256 + (base32 "1r9y714cz8m894rxp7pyvicr1lw2iid24vz6fxbl5wzy8ibgxlqr")))) + (build-system python-build-system) + (inputs + `(("python-chardet" ,python-chardet))) + (native-inputs + `(("python-check-manifest" ,python-check-manifest) + ("python-flake8" ,python-flake8) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov) + ("python-pytest-dependency" ,python-pytest-dependency))) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key outputs tests? #:allow-other-keys) + (when tests? + ;; Make installed executable available for running the tests. + (setenv "PATH" + (string-append (assoc-ref outputs "out") "/bin" + ":" (getenv "PATH"))) + (invoke "pytest" "-vv"))))))) + (home-page "https://github.com/codespell-project/codespell/") + (synopsis "Spellchecker for code") + (description "Codespell fixes common misspellings in text files. +It's designed primarily for checking misspelled words in source code, +but it can be used with other files as well. It does not check for word +membership in a complete dictionary, but instead looks for a set of +common misspellings. Therefore it should catch errors like \"adn\", but +it will not catch \"adnasdfasdf\". This also means it shouldn't +generate false-positives when you use a niche term it doesn't know +about.") + (license + (list + ; for codespell and codespell_lib + license:gpl2 + ; for dictionary*.txt + license:cc-by-sa3.0)))) + (define-public python-pathlib (package (name "python-pathlib") @@ -16255,80 +16347,47 @@ characters, mouse support, and auto suggestions.") (package-with-python2 python-prompt-toolkit-1)) (define-public python-jedi - ;; The 0.18.0 release tests do not work with Python 3.9.6. Use a more - ;; recent commit. - (let ((commit "1d944943c311b2d71655432f8870d68b2cf7d44b") - (revision "1")) - (package - (name "python-jedi") - (version - (git-version "0.18.0" revision commit)) - (source - (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/davidhalter/jedi") - (commit commit))) - (file-name (git-file-name name version)) - (sha256 - (base32 - "052szkbv2pf9hy21any6zb4dhx3c5w1v6b9hn5grlc84zfm350vq")))) - (build-system python-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'unpack-submodule-sources - (lambda* (#:key inputs #:allow-other-keys) - (copy-recursively (assoc-ref inputs "python-django-stubs") - "jedi/third_party/django-stubs") - (copy-recursively (assoc-ref inputs "python-typeshed") - "jedi/third_party/typeshed") - #t)) - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (setenv "HOME" "/tmp") - ;; Disable the pytest tests that fail with pytest 6. See: - ;; https://github.com/davidhalter/jedi/issues/1660. - (invoke "pytest" "-vv" "-k" - "not test_completion[pytest")) - #t))))) - (native-inputs - `(("python-pytest" ,python-pytest) - ("python-docopt" ,python-docopt) - ("python-django-stubs" - ,(origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/davidhalter/django-stubs") - (commit "3d2534ea8d8300c4c9db8f18e300355d5fd5488b"))) - (file-name "django-stubs-checkout") - (sha256 - (base32 "1fpvn4lcqkd2q18z29rcnwakm649fccw2k6jik5d64j7p6xns08r")))) - ("python-typeshed" - ,(origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/davidhalter/typeshed") - (commit "ae9d4f4b21bb5e1239816c301da7b1ea904b44c3"))) - (file-name "typeshed-checkout") - (sha256 - (base32 "02xdip4amj0a7z9xph2mj46x1k55bjxl8d0gkpy25575acyx1kjq")))))) - (propagated-inputs - `(("python-parso" ,python-parso))) - (home-page "https://github.com/davidhalter/jedi") - (synopsis "Autocompletion and static analysis library for Python") - (description - "Jedi is a static analysis tool for Python that can be used in Integrated + (package + (name "python-jedi") + (version "0.18.1") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/davidhalter/jedi") + (commit (string-append "v" version)) + (recursive? #true))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "07drmi3ai49jw5n23ibkambcgijqcw073ihypjgxfnks5lv4yqy1")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (setenv "HOME" "/tmp") + (invoke "python" "-m" "pytest" "-vv")) + #t))))) + (native-inputs + `(("python-colorama" ,python-colorama) + ("python-docopt" ,python-docopt) + ("python-django" ,python-django-2.2) + ("python-pytest" ,python-pytest))) + (propagated-inputs + `(("python-parso" ,python-parso))) + (home-page "https://github.com/davidhalter/jedi") + (synopsis "Autocompletion and static analysis library for Python") + (description + "Jedi is a static analysis tool for Python that can be used in Integrated Development Environments (@dfn{IDE}s) and text editors. It understands Python on a deeper level than many other static analysis frameworks for Python. -Jedi understands docstrings and you can use Jedi autocompletion in your REPL as -well.") - (license license:expat)))) - -(define-public python2-jedi - (package-with-python2 python-jedi)) +Jedi understands docstrings and you can use Jedi autocompletion in your REPL +as well.") + (license license:expat))) (define-public ptpython (package @@ -16353,9 +16412,9 @@ well.") (synopsis "Python Read-Eval-Print-Loop with nice IDE-like features") (description "ptpython is a Python read-eval-print loop with IDE-like features. -It supports syntax highlighting, multiline editing, autocompletion, mouse, -color schemes, bracketed paste, Vi and Emacs keybindings, Chinese characters -etc.") + It supports syntax highlighting, multiline editing, autocompletion, mouse, + color schemes, bracketed paste, Vi and Emacs keybindings, Chinese characters + etc.") (license license:bsd-3) (properties `((python2-variant . ,(delay ptpython-2)))))) @@ -16405,8 +16464,8 @@ etc.") (synopsis "Command-line interface for Python modules") (description "@code{entrypoint2} is an easy to use command-line interface for Python -modules based on @code{argparse}. It translates function signature and -documentation to argparse configuration.") + modules based on @code{argparse}. It translates function signature and + documentation to argparse configuration.") (license license:bsd-3))) (define-public python-pyvirtualdisplay @@ -16472,8 +16531,8 @@ documentation to argparse configuration.") "Python controller library that allows applications to interact with Tor") (description "Stem is a Python controller library for Tor. With it you can use Tor's -control protocol to script against the Tor process and read descriptor data -relays publish about themselves.") + control protocol to script against the Tor process and read descriptor data + relays publish about themselves.") (license license:lgpl3))) (define-public python-pyserial @@ -16499,8 +16558,8 @@ relays publish about themselves.") "https://github.com/pyserial/pyserial") (synopsis "Python Serial Port Bindings") (description "@code{pyserial} provide serial port bindings for Python. It -supports different byte sizes, stop bits, parity and flow control with RTS/CTS -and/or Xon/Xoff. The port is accessed in RAW mode.") + supports different byte sizes, stop bits, parity and flow control with RTS/CTS + and/or Xon/Xoff. The port is accessed in RAW mode.") (license license:bsd-3))) (define-public python2-pyserial @@ -16521,7 +16580,7 @@ and/or Xon/Xoff. The port is accessed in RAW mode.") (home-page "https://github.com/pyserial/pyserial-asyncio") (synopsis "Pyserial asynchronous I/O extension") (description "This package extends Pyserial with asynchronous I/O -support.") + support.") (license license:bsd-3))) (define-public python-pymodbus @@ -16576,24 +16635,24 @@ support.") (home-page "https://github.com/riptideio/pymodbus/") (synopsis "Modbus protocol stack in Python") (description "Pymodbus is a full Modbus protocol implementation using -@code{asyncio}, @code{tornado} or @code{twisted} for its asynchronous -communications core. It includes the following @emph{client} features: -@itemize -@item full read/write protocol on discrete and register -@item most of the extended protocol (diagnostic/file/pipe/setting/information) -@item TCP, UDP, Serial ASCII, Serial RTU, and Serial Binary -@item asynchronous and synchronous versions -@item payload builder/decoder utilities -@item pymodbus read eval print loop (REPL). -@end itemize -It also includes the following @emph{server} features: -@itemize -@item can function as a fully implemented Modbus server -@item TCP, UDP, Serial ASCII, Serial RTU, and Serial Binary -@item asynchronous and synchronous versions -@item full server control context (device information, counters, etc) -@item a number of backing contexts (database, redis, sqlite, a slave device). -@end itemize") + @code{asyncio}, @code{tornado} or @code{twisted} for its asynchronous + communications core. It includes the following @emph{client} features: + @itemize + @item full read/write protocol on discrete and register + @item most of the extended protocol (diagnostic/file/pipe/setting/information) + @item TCP, UDP, Serial ASCII, Serial RTU, and Serial Binary + @item asynchronous and synchronous versions + @item payload builder/decoder utilities + @item pymodbus read eval print loop (REPL). + @end itemize + It also includes the following @emph{server} features: + @itemize + @item can function as a fully implemented Modbus server + @item TCP, UDP, Serial ASCII, Serial RTU, and Serial Binary + @item asynchronous and synchronous versions + @item full server control context (device information, counters, etc) + @item a number of backing contexts (database, redis, sqlite, a slave device). + @end itemize") (license license:bsd-3))) (define-public python-kivy @@ -16630,7 +16689,7 @@ It also includes the following @emph{server} features: "Multitouch application framework") (description "A software library for rapid development of -hardware-accelerated multitouch applications.") + hardware-accelerated multitouch applications.") (license license:expat))) (define-public python2-kivy @@ -16663,7 +16722,7 @@ hardware-accelerated multitouch applications.") (home-page "https://github.com/audreyr/binaryornot") (synopsis "Package to check if a file is binary or text") (description "Ultra-lightweight pure Python package to check if a file is -binary or text.") + binary or text.") (license license:bsd-3) (properties `((python2-variant . ,(delay python2-binaryornot)))))) @@ -16700,7 +16759,7 @@ binary or text.") (home-page "https://github.com/ReFirmLabs/binwalk") (synopsis "Firmware analysis tool") (description "Binwalk is a tool for analyzing, reverse engineering, and -extracting firmware images") + extracting firmware images") (license license:expat))) (define-public python-binwalk @@ -16731,9 +16790,9 @@ extracting firmware images") (home-page "http://nltk.org/") (synopsis "Natural Language Toolkit") (description "It provides interfaces to over 50 corpora and lexical -resources such as WordNet, along with a suite of text processing libraries -for classification, tokenization, stemming, tagging, parsing, and semantic -reasoning, wrappers for natural language processing libraries.") + resources such as WordNet, along with a suite of text processing libraries + for classification, tokenization, stemming, tagging, parsing, and semantic + reasoning, wrappers for natural language processing libraries.") (license license:asl2.0))) ;; Versions >=3.5 breaks backward-compatibility, @@ -16795,7 +16854,7 @@ reasoning, wrappers for natural language processing libraries.") (synopsis "Python client for Consul") (description "Python client for @url{http://www.consul.io/,Consul}, a tool for service -discovery, monitoring and configuration.") + discovery, monitoring and configuration.") (license license:expat))) (define-public python2-consul @@ -16853,7 +16912,7 @@ discovery, monitoring and configuration.") (home-page "https://github.com/eea/odfpy") (synopsis "Python API and tools to manipulate OpenDocument files") (description "Collection of libraries and utility programs written in -Python to manipulate OpenDocument 1.2 files.") + Python to manipulate OpenDocument 1.2 files.") (license ;; The software is mainly dual GPL2+ and ASL2.0, but includes a ;; number of files with other licenses. @@ -16890,13 +16949,13 @@ Python to manipulate OpenDocument 1.2 files.") (synopsis "Natural sorting for python and shell") (description "Natsort lets you apply natural sorting on lists instead of -lexicographical. If you use the built-in @code{sorted} method in python -on a list such as @code{[@code{a20}, @code{a9}, @code{a1}, @code{a4}, -@code{a10}]}, it would be returned as @code{[@code{a1}, @code{a10}, @code{a20}, -@code{a4}, @code{a9}]}. Natsort provides a function @code{natsorted} that -identifies numbers and sorts them separately from strings. It can also sort -version numbers, real numbers, mixed types and more, and comes with a shell -command @command{natsort} that exposes this functionality in the command line.") + lexicographical. If you use the built-in @code{sorted} method in python + on a list such as @code{[@code{a20}, @code{a9}, @code{a1}, @code{a4}, + @code{a10}]}, it would be returned as @code{[@code{a1}, @code{a10}, @code{a20}, + @code{a4}, @code{a9}]}. Natsort provides a function @code{natsorted} that + identifies numbers and sorts them separately from strings. It can also sort + version numbers, real numbers, mixed types and more, and comes with a shell + command @command{natsort} that exposes this functionality in the command line.") (license license:expat))) (define-public glances @@ -16928,8 +16987,8 @@ command @command{natsort} that exposes this functionality in the command line.") (synopsis "Cross-platform curses-based monitoring tool") (description "Glances is a curses-based monitoring tool for a wide variety of platforms. -Glances uses the PsUtil library to get information from your system. It -monitors CPU, load, memory, network bandwidth, disk I/O, disk use, and more.") + Glances uses the PsUtil library to get information from your system. It + monitors CPU, load, memory, network bandwidth, disk I/O, disk use, and more.") (license license:lgpl3+))) (define-public python-graphql-core @@ -16964,9 +17023,9 @@ monitors CPU, load, memory, network bandwidth, disk I/O, disk use, and more.") (synopsis "GraphQL implementation for Python") (description "GraphQL implementation for Python. GraphQL is a data query language and -runtime designed and used to request and deliver data to mobile and web apps. -This library is a port of @url{https://github.com/graphql/graphql-js,graphql-js} -to Python.") + runtime designed and used to request and deliver data to mobile and web apps. + This library is a port of @url{https://github.com/graphql/graphql-js,graphql-js} + to Python.") (license license:expat))) (define-public python-graphql-relay @@ -16998,10 +17057,10 @@ to Python.") (synopsis "Relay implementation for Python") (description "This is a library to allow the easy creation of Relay-compliant servers -using the GraphQL Python reference implementation of a GraphQL server. It -should be noted that the code is a exact port of the original -@url{https://github.com/graphql/graphql-relay-js,graphql-relay js implementation} -from Facebook.") + using the GraphQL Python reference implementation of a GraphQL server. It + should be noted that the code is a exact port of the original + @url{https://github.com/graphql/graphql-relay-js,graphql-relay js implementation} + from Facebook.") (license license:expat))) (define-public python-graphene @@ -17028,8 +17087,8 @@ from Facebook.") (synopsis "GraphQL Framework for Python") (description "Graphene is a Python library for building GraphQL schemas/types. -A GraphQL schema describes your data model, and provides a GraphQL server -with an associated set of resolve methods that know how to fetch data.") + A GraphQL schema describes your data model, and provides a GraphQL server + with an associated set of resolve methods that know how to fetch data.") (license license:expat))) (define-public python-random2 @@ -17050,13 +17109,13 @@ with an associated set of resolve methods that know how to fetch data.") (synopsis "Python 3 version of the Python 2 @code{random} module") (description "This package provides a Python 3 ported version of Python 2.7’s -@code{random} module. It has also been back-ported to work in Python 2.6. + @code{random} module. It has also been back-ported to work in Python 2.6. -In Python 3, the implementation of @code{randrange()} was changed, so that -even with the same seed you get different sequences in Python 2 and 3. + In Python 3, the implementation of @code{randrange()} was changed, so that + even with the same seed you get different sequences in Python 2 and 3. -This package closes that gap, allowing stable random number generation -between the different Python versions.") + This package closes that gap, allowing stable random number generation + between the different Python versions.") (license license:psfl))) (define-public python2-random2 @@ -17079,8 +17138,8 @@ between the different Python versions.") (home-page "https://github.com/shibukawa/snowball_py") (synopsis "Snowball stemming library collection for Python") (description "This package provides 16 word stemmer algorithms generated -from Snowball algorithms. It includes the 15 original ones plus the Poerter -English stemmer.") + from Snowball algorithms. It includes the 15 original ones plus the Poerter + English stemmer.") (license license:bsd-3))) (define-public python2-snowballstemmer @@ -17128,12 +17187,12 @@ English stemmer.") (synopsis "Setproctitle implementation for Python to customize the process title") (description "The library allows a process to change its title (as displayed -by system tools such as ps and top). + by system tools such as ps and top). -Changing the title is mostly useful in multi-process systems, for -example when a master process is forked: changing the children's title -allows identifying the task each process is busy with. The technique -is used by PostgreSQL and the OpenSSH Server for example.") + Changing the title is mostly useful in multi-process systems, for + example when a master process is forked: changing the children's title + allows identifying the task each process is busy with. The technique + is used by PostgreSQL and the OpenSSH Server for example.") (license license:bsd-3) (properties `((python2-variant . ,(delay python2-setproctitle)))))) @@ -17175,9 +17234,9 @@ is used by PostgreSQL and the OpenSSH Server for example.") (synopsis "General purpose Python data validator") (description "It allows validation of arbitrary Python data structures. -The schema format is based on the JSON Schema -proposal (http://json-schema.org), so combined with json the library is also -useful as a validator for JSON data.") + The schema format is based on the JSON Schema + proposal (http://json-schema.org), so combined with json the library is also + useful as a validator for JSON data.") (license license:expat))) (define-public python2-validictory @@ -17200,9 +17259,9 @@ useful as a validator for JSON data.") (synopsis "Analyze binary and library file information") (description "This Python library provides interfaces for parsing and -analyzing two binary and library file formats; the Executable and Linking -Format (ELF), and debugging information in the Debugging With Attributed -Record Format (DWARF).") + analyzing two binary and library file formats ; the Executable and Linking + Format (ELF), and debugging information in the Debugging With Attributed + Record Format (DWARF).") (license license:public-domain))) (define-public python-pyev @@ -17253,7 +17312,7 @@ Record Format (DWARF).") (synopsis "Gets image size of files in various formats in Python") (description "This package allows determination of image size from -PNG, JPEG, JPEG2000 and GIF files in pure Python.") + PNG, JPEG, JPEG2000 and GIF files in pure Python.") (license license:expat))) (define-public python2-imagesize @@ -17306,10 +17365,10 @@ PNG, JPEG, JPEG2000 and GIF files in pure Python.") (home-page "https://github.com/kislyuk/argcomplete") (synopsis "Shell tab completion for Python argparse") (description "argcomplete provides extensible command line tab completion -of arguments and options for Python scripts using @code{argparse}. It's -particularly useful for programs with many options or sub-parsers that can -dynamically suggest completions; for example, when browsing resources over the -network.") + of arguments and options for Python scripts using @code{argparse}. It's + particularly useful for programs with many options or sub-parsers that can + dynamically suggest completions ; for example, when browsing resources over the + network.") (license license:asl2.0) (properties `((python2-variant . ,(delay python2-argcomplete)))))) @@ -17374,7 +17433,7 @@ network.") (home-page "http://opensource.perlig.de/rcssmin/") (synopsis "CSS Minifier") (description "The minifier is based on the semantics of the YUI compressor, -which itself is based on the rule list by Isaac Schlueter.") + which itself is based on the rule list by Isaac Schlueter.") (license license:asl2.0))) (define-public python-rjsmin @@ -17409,9 +17468,9 @@ which itself is based on the rule list by Isaac Schlueter.") (home-page "http://opensource.perlig.de/rjsmin/") (synopsis "Javascript Minifier") (description "@code{rJSmin} is a javascript minifier written in Python. The -minifier is based on the semantics of jsmin.c by Douglas Crockford. The module -is a re-implementation aiming for speed, so it can be used at runtime (rather -than during a preprocessing step).") + minifier is based on the semantics of jsmin.c by Douglas Crockford. The module + is a re-implementation aiming for speed, so it can be used at runtime (rather + than during a preprocessing step).") (license license:asl2.0))) (define-public python-xopen @@ -17431,10 +17490,10 @@ than during a preprocessing step).") (home-page "https://github.com/marcelm/xopen/") (synopsis "Open compressed files transparently") (description "This module provides an @code{xopen} function that works like -Python's built-in @code{open} function, but can also deal with compressed files. -Supported compression formats are gzip, bzip2 and, xz, and are automatically -recognized by their file extensions. The focus is on being as efficient as -possible on all supported Python versions.") + Python's built-in @code{open} function, but can also deal with compressed files. + Supported compression formats are gzip, bzip2 and, xz, and are automatically + recognized by their file extensions. The focus is on being as efficient as + possible on all supported Python versions.") (license license:expat))) (define-public python2-xopen @@ -17481,29 +17540,29 @@ possible on all supported Python versions.") (home-page "https://cheetahtemplate.org/") (synopsis "Template engine") (description "Cheetah is a text-based template engine and Python code -generator. - -Cheetah can be used as a standalone templating utility or referenced as -a library from other Python applications. It has many potential uses, -but web developers looking for a viable alternative to ASP, JSP, PHP and -PSP are expected to be its principle user group. - -Features: -@enumerate -@item Generates HTML, SGML, XML, SQL, Postscript, form email, LaTeX, or any other - text-based format. -@item Cleanly separates content, graphic design, and program code. -@item Blends the power and flexibility of Python with a simple template language - that non-programmers can understand. -@item Gives template writers full access to any Python data structure, module, - function, object, or method in their templates. -@item Makes code reuse easy by providing an object-orientated interface to - templates that is accessible from Python code or other Cheetah templates. - One template can subclass another and selectively reimplement sections of it. -@item Provides a simple, yet powerful, caching mechanism that can dramatically - improve the performance of a dynamic website. -@item Compiles templates into optimized, yet readable, Python code. -@end enumerate") + generator. + + Cheetah can be used as a standalone templating utility or referenced as + a library from other Python applications. It has many potential uses, + but web developers looking for a viable alternative to ASP, JSP, PHP and + PSP are expected to be its principle user group. + + Features: + @enumerate + @item Generates HTML, SGML, XML, SQL, Postscript, form email, LaTeX, or any other + text-based format. + @item Cleanly separates content, graphic design, and program code. + @item Blends the power and flexibility of Python with a simple template language + that non-programmers can understand. + @item Gives template writers full access to any Python data structure, module, + function, object, or method in their templates. + @item Makes code reuse easy by providing an object-orientated interface to + templates that is accessible from Python code or other Cheetah templates. + One template can subclass another and selectively reimplement sections of it. + @item Provides a simple, yet powerful, caching mechanism that can dramatically + improve the performance of a dynamic website. + @item Compiles templates into optimized, yet readable, Python code. + @end enumerate") (license (license:x11-style "file://LICENSE")))) (define-public python2-cheetah @@ -17550,7 +17609,7 @@ Features: (home-page "https://www.dulwich.io/") (synopsis "Git implementation in Python") (description "Dulwich is an implementation of the Git file formats and -protocols written in pure Python.") + protocols written in pure Python.") ;; Can be used with either license. (license (list license:asl2.0 license:gpl2+)))) @@ -17577,13 +17636,13 @@ protocols written in pure Python.") (home-page "https://www.dlitz.net/software/python-pbkdf2/") (synopsis "Password-based key derivation") (description "This module implements the password-based key derivation -function, PBKDF2, specified in RSA PKCS#5 v2.0. + function, PBKDF2, specified in RSA PKCS#5 v2.0. -PKCS#5 v2.0 Password-Based Key Derivation is a key derivation function which -is part of the RSA Public Key Cryptography Standards series. The provided -implementation takes a password or a passphrase and a salt value (and -optionally a iteration count, a digest module, and a MAC module) and provides -a file-like object from which an arbitrarily-sized key can be read.") + PKCS#5 v2.0 Password-Based Key Derivation is a key derivation function which + is part of the RSA Public Key Cryptography Standards series. The provided + implementation takes a password or a passphrase and a salt value (and + optionally a iteration count, a digest module, and a MAC module) and provides + a file-like object from which an arbitrarily-sized key can be read.") (license license:expat))) (define-public python2-pbkdf2 @@ -17610,12 +17669,12 @@ a file-like object from which an arbitrarily-sized key can be read.") (home-page "https://github.com/lincolnloop/python-qrcode") (synopsis "QR Code image generator") (description "This package provides a pure Python QR Code generator -module. It uses the Python Imaging Library (PIL) to allow for the generation -of QR Codes. + module. It uses the Python Imaging Library (PIL) to allow for the generation + of QR Codes. -In addition this package provides a command line tool to generate QR codes and -either write these QR codes to a file or do the output as ascii art at the -console.") + In addition this package provides a command line tool to generate QR codes and + either write these QR codes to a file or do the output as ascii art at the + console.") (license license:bsd-3))) (define-public python2-qrcode @@ -17639,7 +17698,7 @@ console.") (synopsis "Convert RST to ANSI-decorated console output") (description "Python module dedicated to rendering RST (reStructuredText) documents -to ansi-escaped strings suitable for display in a terminal.") + to ansi-escaped strings suitable for display in a terminal.") (license license:expat))) (define-public python-ansi2html @@ -17663,7 +17722,7 @@ to ansi-escaped strings suitable for display in a terminal.") (synopsis "Convert ANSI-decorated console output to HTML") (description "@command{ansi2html} is a Python library and command line utility for -converting text with ANSI color codes to HTML or LaTeX.") + converting text with ANSI color codes to HTML or LaTeX.") (license license:gpl3+))) (define-public python2-ansi2html @@ -17687,10 +17746,10 @@ converting text with ANSI color codes to HTML or LaTeX.") (synopsis "Terminal framework API") (description "Easy ANSI is a terminal framework API to give you an easy way to use -colors, cursor control movements, and line/box drawing. It is not meant as a -replacement to more full-featured frameworks (such as curses or urwid), but as -a tool to quickly create nice-looking screens in your terminal window. You -can even create animations with the cursor controls.") + colors, cursor control movements, and line/box drawing. It is not meant as a + replacement to more full-featured frameworks (such as curses or urwid), but as + a tool to quickly create nice-looking screens in your terminal window. You + can even create animations with the cursor controls.") (license license:expat))) (define-public python-ddt @@ -17713,8 +17772,8 @@ can even create animations with the cursor controls.") (synopsis "Data-Driven Tests") (description "Data-Driven Tests (@dfn{DDT}) allow you to multiply one test case by -running it with different test data, and make it appear as multiple test -cases.") + running it with different test data, and make it appear as multiple test + cases.") (license license:expat))) (define-public python-pycountry @@ -17733,16 +17792,16 @@ cases.") (synopsis "ISO databases for languages, countries, currencies, etc.") (description "@code{pycountry} provides the ISO databases for the standards: -@enumerate -@item 639-3 (Languages) -@item 3166 (Countries) -@item 3166-3 (Deleted Countries) -@item 3166-2 (Subdivisions of countries) -@item 4217 (Currencies) -@item 15924 (Scripts) -@end enumerate -It includes a copy from Debian’s pkg-isocodes and makes the data accessible -through a Python API.") + @enumerate + @item 639-3 (Languages) + @item 3166 (Countries) + @item 3166-3 (Deleted Countries) + @item 3166-2 (Subdivisions of countries) + @item 4217 (Currencies) + @item 15924 (Scripts) + @end enumerate + It includes a copy from Debian’s pkg-isocodes and makes the data accessible + through a Python API.") (license license:lgpl2.1+))) (define-public python2-pycountry @@ -17767,9 +17826,9 @@ through a Python API.") (synopsis "Bindings to picosat (a SAT solver)") (description "This package provides efficient Python bindings to @code{picosat} on -the C level. When importing pycosat, the @code{picosat} solver becomes part -of the Python process itself. @code{picosat} is a @dfn{Boolean Satisfiability -Problem} (SAT) solver.") + the C level. When importing pycosat, the @code{picosat} solver becomes part + of the Python process itself. @code{picosat} is a @dfn{Boolean Satisfiability + Problem} (SAT) solver.") (license license:expat))) (define-public python2-pycosat @@ -17800,13 +17859,13 @@ Problem} (SAT) solver.") (synopsis "Version of dict that keeps keys in insertion order") (description "This is an implementation of an ordered dictionary with @dfn{Key -Insertion Order} (KIO: updates of values do not affect the position of the -key), @dfn{Key Value Insertion Order} (KVIO, an existing key's position is -removed and put at the back). The standard library module @code{OrderedDict}, -implemented later, implements a subset of @code{ordereddict} functionality. -Sorted dictionaries are also provided. Currently only with @dfn{Key Sorted -Order} (KSO, no sorting function can be specified, but a transform can be -specified to apply on the key before comparison (e.g. @code{string.lower})).") + Insertion Order} (KIO: updates of values do not affect the position of the + key), @dfn{Key Value Insertion Order} (KVIO, an existing key's position is + removed and put at the back). The standard library module @code{OrderedDict}, + implemented later, implements a subset of @code{ordereddict} functionality. + Sorted dictionaries are also provided. Currently only with @dfn{Key Sorted + Order} (KSO, no sorting function can be specified, but a transform can be + specified to apply on the key before comparison (e.g. @code{string.lower})).") (license license:expat))) (define-public python-pypeg2 @@ -17828,8 +17887,8 @@ specified to apply on the key before comparison (e.g. @code{string.lower})).") (home-page "https://fdik.org/pyPEG/") (synopsis "Parsing Expression Grammars in Python") (description "PyPEG is an intrinsic parser interpreter framework for -Python. It is based on Parsing Expression Grammars, PEG. With pyPEG you can -parse many formal languages.") + Python. It is based on Parsing Expression Grammars, PEG. With pyPEG you can + parse many formal languages.") (license license:gpl2))) (define-public python-incremental @@ -17847,7 +17906,7 @@ parse many formal languages.") (home-page "https://github.com/hawkowl/incremental") (synopsis "Library for versioning Python projects") (description "Incremental is a small library that versions your Python -projects.") + projects.") (license license:expat))) (define-public python2-incremental @@ -17884,9 +17943,9 @@ projects.") (synopsis "Pythonic task execution") (description "Invoke is a Python task execution tool and library, drawing inspiration -from various sources to arrive at a powerful and clean feature set. It is -evolved from the Fabric project, but focuses on local and abstract concerns -instead of servers and network commands.") + from various sources to arrive at a powerful and clean feature set. It is + evolved from the Fabric project, but focuses on local and abstract concerns + instead of servers and network commands.") (license license:bsd-3))) (define-public python2-invoke @@ -17936,8 +17995,8 @@ instead of servers and network commands.") (home-page "https://github.com/glyph/Automat") (synopsis "Self-service finite-state machines") (description "Automat is a library for concise, idiomatic Python -expression of finite-state automata (particularly deterministic finite-state -transducers).") + expression of finite-state automata (particularly deterministic finite-state + transducers).") (license license:expat))) (define-public python2-automat @@ -17963,7 +18022,7 @@ transducers).") (home-page "https://github.com/miyakogi/m2r") (synopsis "Markdown to reStructuredText converter") (description "M2R converts a markdown file including reST markups to valid -reST format.") + reST format.") (license license:expat))) (define-public python2-m2r @@ -17983,8 +18042,8 @@ reST format.") (home-page "https://github.com/twisted/constantly") (synopsis "Symbolic constants in Python") (description "Constantly is a Python library that provides symbolic -constant support. It includes collections and constants with text, numeric, -and bit flag values.") + constant support. It includes collections and constants with text, numeric, + and bit flag values.") (license license:expat))) (define-public python2-constantly @@ -18016,8 +18075,8 @@ and bit flag values.") (home-page "https://github.com/python-attrs/attrs/") (synopsis "Attributes without boilerplate") (description "@code{attrs} is a Python package with class decorators that -ease the chores of implementing the most common attribute-related object -protocols.") + ease the chores of implementing the most common attribute-related object + protocols.") (license license:expat))) (define-public python2-attrs @@ -18059,8 +18118,8 @@ protocols.") (home-page "https://liw.fi/cliapp/") (synopsis "Python framework for command line programs") (description "@code{cliapp} is a Python framework for command line -programs. It contains the typical stuff such programs need to do, such -as parsing the command line for options, and iterating over input files.") + programs. It contains the typical stuff such programs need to do, such + as parsing the command line for options, and iterating over input files.") (license license:gpl2+))) (define-public python2-cliapp @@ -18095,11 +18154,11 @@ as parsing the command line for options, and iterating over input files.") (lambda _ (invoke "make" "check")))))) (home-page "https://liw.fi/ttystatus/") (synopsis "Python library for showing progress reporting and -status updates on terminals") + status updates on terminals") (description "@code{ttystatus} is a Python library for showing progress -reporting and status updates on terminals, for command line programs. -Output is automatically adapted to the width of the terminal: truncated -if it does not fit, and resized if the terminal size changes.") + reporting and status updates on terminals, for command line programs. + Output is automatically adapted to the width of the terminal: truncated + if it does not fit, and resized if the terminal size changes.") (license license:gpl3+))) (define-public python2-ttystatus @@ -18124,11 +18183,11 @@ if it does not fit, and resized if the terminal size changes.") (home-page "https://liw.fi/tracing/") (synopsis "Python debug logging helper") (description "@code{python2-tracing} is a python library for -logging debug messages. It provides a way to turn debugging messages -on and off, based on the filename they occur in. It is much faster -than using @code{logging.Filter} to accomplish the same thing, which -matters when code is run in production mode. The actual logging still -happens using the @code{logging} library.") + logging debug messages. It provides a way to turn debugging messages + on and off, based on the filename they occur in. It is much faster + than using @code{logging.Filter} to accomplish the same thing, which + matters when code is run in production mode. The actual logging still + happens using the @code{logging} library.") (license license:gpl3+))) (define-public python-astroid @@ -18153,16 +18212,16 @@ happens using the @code{logging} library.") ("python-pytest-runner" ,python-pytest-runner))) (home-page "https://github.com/PyCQA/astroid") (synopsis "Common base representation of python source code for pylint and -other projects") + other projects") (description "@code{python-astroid} provides a common base representation -of python source code for projects such as pychecker, pyreverse, pylint, etc. - -It provides a compatible representation which comes from the _ast module. It -rebuilds the tree generated by the builtin _ast module by recursively walking -down the AST and building an extended ast. The new node classes have -additional methods and attributes for different usages. They include some -support for static inference and local name scopes. Furthermore, astroid -builds partial trees by inspecting living objects.") + of python source code for projects such as pychecker, pyreverse, pylint, etc. + + It provides a compatible representation which comes from the _ast module. It + rebuilds the tree generated by the builtin _ast module by recursively walking + down the AST and building an extended ast. The new node classes have + additional methods and attributes for different usages. They include some + support for static inference and local name scopes. Furthermore, astroid + builds partial trees by inspecting living objects.") (license license:lgpl2.1+) (properties `((python2-variant . ,(delay python2-astroid)))))) @@ -18218,9 +18277,9 @@ builds partial trees by inspecting living objects.") (home-page "https://github.com/xlcnd/isbnlib") (synopsis "Python library to work with ISBN strings") (description "@code{python-isbnlib} is a (pure) python library that provides -several useful methods and functions to validate, clean, transform, hyphenate and -get metadata for ISBN strings. Its origin was as the core of isbntools. This short -version, is suitable to be include as a dependency in other projects.") + several useful methods and functions to validate, clean, transform, hyphenate and + get metadata for ISBN strings. Its origin was as the core of isbntools. This short + version, is suitable to be include as a dependency in other projects.") (license license:lgpl3+))) (define-public python-isort @@ -18299,9 +18358,9 @@ version, is suitable to be include as a dependency in other projects.") (home-page "https://github.com/PyCQA/isort") (synopsis "Python utility/library to sort python imports") (description "@code{python-isort} is a python utility/library to sort -imports alphabetically, and automatically separated into sections. It -provides a command line utility, a python library and plugins for various -editors.") + imports alphabetically, and automatically separated into sections. It + provides a command line utility, a python library and plugins for various + editors.") (license license:expat) (properties `((python2-variant . ,(delay python2-isort)))))) @@ -18333,7 +18392,7 @@ editors.") (home-page "https://github.com/jaraco/backports.functools_lru_cache") (synopsis "Backport of functools.lru_cache from Python 3.3") (description "@code{python2-backports-functools-lru-cache} is a backport -of @code{functools.lru_cache} from python 3.3.") + of @code{functools.lru_cache} from python 3.3.") (license license:expat))) (define-public python-configparser @@ -18353,8 +18412,8 @@ of @code{functools.lru_cache} from python 3.3.") (home-page "https://github.com/jaraco/configparser/") (synopsis "Backport of configparser from python 3.5") (description "@code{python-configparser} is a backport of -@code{configparser} from Python 3.5 so that it can be used directly -in other versions.") + @code{configparser} from Python 3.5 so that it can be used directly + in other versions.") (license license:expat))) (define-public python2-configparser @@ -18375,14 +18434,14 @@ in other versions.") (home-page "https://github.com/RonnyPfannschmidt/iniconfig") (synopsis "Simple INI-file parser") (description "The @code{iniconfig} package provides a small and simple -INI-file parser module having a unique set of features; @code{iniconfig} -@itemize -@item maintains the order of sections and entries; -@item supports multi-line values with or without line-continuations; -@item supports \"#\" comments everywhere; -@item raises errors with proper line-numbers; -@item raises an error when two sections have the same name. -@end itemize") + INI-file parser module having a unique set of features ; @code{iniconfig} + @itemize + @item maintains the order of sections and entries ; + @item supports multi-line values with or without line-continuations ; + @item supports \"#\" comments everywhere ; + @item raises errors with proper line-numbers ; + @item raises an error when two sections have the same name. + @end itemize") (license license:expat))) (define-public python-mamba @@ -18404,7 +18463,7 @@ INI-file parser module having a unique set of features; @code{iniconfig} (synopsis "Test runner for Python") (description "Mamba is a Behaviour-Driven Development tool for Python developers. -Is heavily influenced from RSpec, Mocha, Jasmine or Ginkgo.") + Is heavily influenced from RSpec, Mocha, Jasmine or Ginkgo.") (license license:expat))) (define-public python-mando @@ -18428,7 +18487,7 @@ Is heavily influenced from RSpec, Mocha, Jasmine or Ginkgo.") "Wrapper around argparse, allowing creation of complete CLI applications") (description "This package is a wrapper around argparse, allowing you to write complete CLI -applications in seconds while maintaining all the flexibility.") + applications in seconds while maintaining all the flexibility.") (license license:expat))) (define-public python2-mando @@ -18452,7 +18511,7 @@ applications in seconds while maintaining all the flexibility.") (synopsis "Python command-line parsing library") (description "This package is mostly for people who want to have @code{argparse} on -older Pythons because it was not part of the standard library back then.") + older Pythons because it was not part of the standard library back then.") (license license:psfl))) (define-public python-mwclient @@ -18511,7 +18570,7 @@ older Pythons because it was not part of the standard library back then.") (synopsis "Convenient utilities not included with the standard Python install") (description "Python Utils is a collection of small Python functions and classes which -make common patterns shorter and easier.") + make common patterns shorter and easier.") (license license:bsd-2))) (define-public python-diff-match-patch @@ -18529,7 +18588,7 @@ make common patterns shorter and easier.") (home-page "https://code.google.com/p/google-diff-match-patch") (synopsis "Synchronize plain text") (description "Diff Match and Patch libraries offer robust algorithms to -perform the operations required for synchronizing plain text.") + perform the operations required for synchronizing plain text.") (license license:asl2.0))) (define-public python2-diff-match-patch @@ -18573,13 +18632,13 @@ perform the operations required for synchronizing plain text.") (synopsis "Fast computation of Levenshtein distance and string similarity") (description "The Levenshtein Python C extension module contains functions for fast computation of -@enumerate -@item Levenshtein (edit) distance, and edit operations -@item string similarity -@item approximate median strings, and generally string averaging -@item string sequence and set similarity -@end enumerate -It supports both normal and Unicode strings.") + @enumerate + @item Levenshtein (edit) distance, and edit operations + @item string similarity + @item approximate median strings, and generally string averaging + @item string sequence and set similarity + @end enumerate + It supports both normal and Unicode strings.") (license license:gpl2+))) (define-public python2-levenshtein @@ -18605,12 +18664,12 @@ It supports both normal and Unicode strings.") (synopsis "Directory iteration function") (description "Directory iteration function like os.listdir(), except that instead of -returning a list of bare filenames, it yields DirEntry objects that include -file type and stat information along with the name. Using scandir() increases -the speed of os.walk() by 2-20 times (depending on the platform and file -system) by avoiding unnecessary calls to os.stat() in most cases. + returning a list of bare filenames, it yields DirEntry objects that include + file type and stat information along with the name. Using scandir() increases + the speed of os.walk() by 2-20 times (depending on the platform and file + system) by avoiding unnecessary calls to os.stat() in most cases. -This package is part of the Python standard library since version 3.5.") + This package is part of the Python standard library since version 3.5.") (license license:bsd-3))) (define-public python2-scandir @@ -18633,10 +18692,10 @@ This package is part of the Python standard library since version 3.5.") (synopsis "Python implementations of various stemming algorithms") (description "Python implementations of the Porter, Porter2, Paice-Husk, and Lovins -stemming algorithms for English. These implementations are straightforward and -efficient, unlike some Python versions of the same algorithms available on the -Web. This package is an extraction of the stemming code included in the Whoosh -search engine.") + stemming algorithms for English. These implementations are straightforward and + efficient, unlike some Python versions of the same algorithms available on the + Web. This package is an extraction of the stemming code included in the Whoosh + search engine.") (license license:public-domain))) (define-public python-factory-boy @@ -18660,12 +18719,12 @@ search engine.") (description "Factory_boy is a fixtures replacement based on thoughtbot’s factory_girl. -As a fixtures replacement tool, it aims to replace static, hard to maintain -fixtures with easy-to-use factories for complex object. + As a fixtures replacement tool, it aims to replace static, hard to maintain + fixtures with easy-to-use factories for complex object. -Instead of building an exhaustive test setup with every possible combination -of corner cases, factory_boy allows you to use objects customized for the -current test, while only declaring the test-specific fields") + Instead of building an exhaustive test setup with every possible combination + of corner cases, factory_boy allows you to use objects customized for the + current test, while only declaring the test-specific fields") (license license:expat))) (define-public python-translate-toolkit @@ -18702,7 +18761,7 @@ current test, while only declaring the test-specific fields") (synopsis "Tools and API for translation and localization engineering") (description "Tools and API for translation and localization engineering. It contains -several utilities, as well as an API for building localization tools.") + several utilities, as well as an API for building localization tools.") (license license:gpl2+))) ;; Required for virtaal, newer versions do not build with python2 @@ -18737,8 +18796,8 @@ several utilities, as well as an API for building localization tools.") (home-page "https://github.com/pypa/packaging") (synopsis "Core utilities for Python packages") (description "Packaging is a Python module for dealing with Python packages. -It offers an interface for working with package versions, names, and dependency -information.") + It offers an interface for working with package versions, names, and dependency + information.") ;; From 'LICENSE': This software is made available under the terms of ;; *either* of the licenses found in LICENSE.APACHE or LICENSE.BSD. ;; Contributions to this software is made under the terms of *both* these @@ -18768,8 +18827,8 @@ information.") (home-page "https://relatorio.tryton.org/") (synopsis "Templating library able to output ODT and PDF files") (description "Relatorio is a templating library which provides a way to -easily output ODT, ODS, PNG, SVG and several other kinds of files. Support -for more filetypes can be easily added by creating plugins for them.") + easily output ODT, ODS, PNG, SVG and several other kinds of files. Support + for more filetypes can be easily added by creating plugins for them.") (license license:gpl3+))) (define-public python-radon @@ -18806,13 +18865,13 @@ for more filetypes can be easily added by creating plugins for them.") (home-page "https://radon.readthedocs.org/") (synopsis "Code Metrics in Python") (description "Radon is a Python tool which computes various code metrics. -Supported metrics are: -@itemize @bullet -@item raw metrics: SLOC, comment lines, blank lines, &c. -@item Cyclomatic Complexity (i.e. McCabe’s Complexity) -@item Halstead metrics (all of them) -@item the Maintainability Index (a Visual Studio metric) -@end itemize") + Supported metrics are: + @itemize @bullet + @item raw metrics: SLOC, comment lines, blank lines, &c. + @item Cyclomatic Complexity (i.e. McCabe’s Complexity) + @item Halstead metrics (all of them) + @item the Maintainability Index (a Visual Studio metric) + @end itemize") (properties `((python2-variant . ,(delay python2-radon)))) (license license:expat))) @@ -18845,7 +18904,7 @@ Supported metrics are: (synopsis "Automated testing library in python for python") (description "Sure is a python library that leverages a DSL for writing assertions. -Sure is heavily inspired by @code{RSpec Expectations} and @code{should.js}.") + Sure is heavily inspired by @code{RSpec Expectations} and @code{should.js}.") (license license:gpl3+))) (define-public python2-sure @@ -18872,7 +18931,7 @@ Sure is heavily inspired by @code{RSpec Expectations} and @code{should.js}.") "ANSI terminal tool for python, colored shell and other handy fancy features") (description "@code{Couleur} provides python programs a way to use the ANSI features in a unix -terminal such as coloured output in the shell, overwriting output, indentation, etc.") + terminal such as coloured output in the shell, overwriting output, indentation, etc.") ;; README.md says ASL2.0, but all source code headers are LGPL3+. ;; https://github.com/gabrielfalcao/couleur/issues/11 (license license:lgpl3+))) @@ -18902,8 +18961,8 @@ terminal such as coloured output in the shell, overwriting output, indentation, (synopsis "Python binding for Hoedown") (description "@code{Misaka} is a CFFI-based binding for @code{Hoedown}, a fast markdown processing -library written in C. It features a fast HTML renderer and functionality to make custom -renderers (e.g. man pages or LaTeX).") + library written in C. It features a fast HTML renderer and functionality to make custom + renderers (e.g. man pages or LaTeX).") (license license:expat))) (define-public python2-misaka @@ -18943,9 +19002,9 @@ renderers (e.g. man pages or LaTeX).") (synopsis "Markdown-based test runner for python") (description "@code{Steadymark} allows documentation to be written in github-flavoured -markdown. The documentation may contain snippets of code surrounded by python -code blocks and @code{Steadymark} will find these snippets and run them, making -sure that there are no old malfunctional examples in the documentation examples.") + markdown. The documentation may contain snippets of code surrounded by python + code blocks and @code{Steadymark} will find these snippets and run them, making + sure that there are no old malfunctional examples in the documentation examples.") (license license:expat))) (define-public python-jsonpointer @@ -18963,7 +19022,7 @@ sure that there are no old malfunctional examples in the documentation examples. (home-page "https://github.com/stefankoegl/python-json-pointer") (synopsis "Identify specific nodes in a JSON document") (description "@code{jsonpointer} allows you to access specific nodes -by path in a JSON document (see RFC 6901).") + by path in a JSON document (see RFC 6901).") (license license:bsd-3))) (define-public python2-jsonpointer @@ -18990,7 +19049,7 @@ by path in a JSON document (see RFC 6901).") (home-page "https://github.com/stefankoegl/python-json-patch") (synopsis "Applying JSON Patches in Python 2.6+ and 3.x") (description "@code{jsonpatch} is a library and program that allows -applying JSON Patches according to RFC 6902.") + applying JSON Patches according to RFC 6902.") (license license:bsd-3))) (define-public python2-jsonpatch @@ -19037,8 +19096,8 @@ applying JSON Patches according to RFC 6902.") (synopsis "Parse and validate URI references") (description "@code{rfc3986} is a Python implementation of RFC@tie{}3986 including -validation and authority parsing. This module also supports RFC@tie{}6874 -which adds support for zone identifiers to IPv6 addresses.") + validation and authority parsing. This module also supports RFC@tie{}6874 + which adds support for zone identifiers to IPv6 addresses.") (license license:asl2.0))) (define-public python2-rfc3986 @@ -19059,7 +19118,7 @@ which adds support for zone identifiers to IPv6 addresses.") (home-page "https://pypi.org/project/rfc3987/") (synopsis "Parsing and validation of URIs (RFC 3986) and IRIs (RFC 3987)") (description "@code{rfc3987} provides routines for parsing and -validation of URIs (see RFC 3986) and IRIs (see RFC 3987).") + validation of URIs (see RFC 3986) and IRIs (see RFC 3987).") (license license:gpl3+))) (define-public python2-rfc3987 @@ -19097,8 +19156,8 @@ validation of URIs (see RFC 3986) and IRIs (see RFC 3987).") (synopsis "Python implementation of RFC 6555") (description "Python implementation of the Happy Eyeballs Algorithm described in RFC -6555. Provided with a single file and dead-simple API to allow easy vendoring -and integration into other projects.") + 6555. Provided with a single file and dead-simple API to allow easy vendoring + and integration into other projects.") (license license:asl2.0)))) (define-public python-bagit @@ -19120,8 +19179,8 @@ and integration into other projects.") (home-page "https://libraryofcongress.github.io/bagit-python/") (synopsis "Create and validate BagIt packages") (description "Bagit is a Python library and command line utility for working -with BagIt style packages. BagIt is a minimalist packaging format for digital -preservation.") + with BagIt style packages. BagIt is a minimalist packaging format for digital + preservation.") (license license:cc0))) (define-public python-prov @@ -19149,7 +19208,7 @@ preservation.") "W3C Provenance Data Model supporting PROV-JSON, PROV-XML and PROV-O (RDF)") (description "This package provides a library for W3C Provenance Data Model supporting -PROV-O (RDF), PROV-XML, PROV-JSON import/export.") + PROV-O (RDF), PROV-XML, PROV-JSON import/export.") (license license:expat))) (define-public python-arcp @@ -19171,17 +19230,17 @@ PROV-O (RDF), PROV-XML, PROV-JSON import/export.") "Archive and Package URI parser and generator") (description "@acronym{arcp, Archive and Package} provides functions for creating -@code{arcp_} URIs, which can be used for identifying or parsing hypermedia files -packaged in an archive or package, like a ZIP file. arcp URIs can be used to -consume or reference hypermedia resources bundled inside a file archive or an -application package, as well as to resolve URIs for archive resources within a -programmatic framework. This URI scheme provides mechanisms to generate a -unique base URI to represent the root of the archive, so that relative URI -references in a bundled resource can be resolved within the archive without -having to extract the archive content on the local file system. An arcp URI can -be used for purposes of isolation (e.g. when consuming multiple archives), -security constraints (avoiding \"climb out\" from the archive), or for -externally identiyfing sub-resources referenced by hypermedia formats.") + @code{arcp_} URIs, which can be used for identifying or parsing hypermedia files + packaged in an archive or package, like a ZIP file. arcp URIs can be used to + consume or reference hypermedia resources bundled inside a file archive or an + application package, as well as to resolve URIs for archive resources within a + programmatic framework. This URI scheme provides mechanisms to generate a + unique base URI to represent the root of the archive, so that relative URI + references in a bundled resource can be resolved within the archive without + having to extract the archive content on the local file system. An arcp URI can + be used for purposes of isolation (e.g. when consuming multiple archives), + security constraints (avoiding \"climb out\" from the archive), or for + externally identiyfing sub-resources referenced by hypermedia formats.") (license license:asl2.0))) (define-public python-shellescape @@ -19215,9 +19274,9 @@ externally identiyfing sub-resources referenced by hypermedia formats.") "Shell escape a string to safely use it as a token in a shell command") (description "The shellescape Python module defines the @code{shellescape.quote()} -function that returns a shell-escaped version of a Python string. This is a -backport of the @code{shlex.quote()} function from Python 3.8 that makes it -accessible to users of Python 3 versions < 3.3 and all Python 2.x versions.") + function that returns a shell-escaped version of a Python string. This is a + backport of the @code{shlex.quote()} function from Python 3.8 that makes it + accessible to users of Python 3 versions < 3.3 and all Python 2.x versions.") (license license:expat))) (define-public python-validators @@ -19247,9 +19306,9 @@ accessible to users of Python 3 versions < 3.3 and all Python 2.x versions.") (synopsis "Data validation library") (description "This package contains validators for different things such as email -addresses, IP addresses, URLs, hashes and more. It has been designed to -be easy to use and not require defining a schema or form just to validate -some input.") + addresses, IP addresses, URLs, hashes and more. It has been designed to + be easy to use and not require defining a schema or form just to validate + some input.") (license license:expat))) (define-public python-validate-email @@ -19267,7 +19326,7 @@ some input.") (home-page "https://github.com/syrusakbary/validate_email") (synopsis "Verifies if an email address is valid and really exists") (description "@code{validate_email} can be used to verify if an email -address is valid and really exists.") + address is valid and really exists.") (license license:lgpl3+))) (define-public python2-validate-email @@ -19322,9 +19381,9 @@ address is valid and really exists.") ("python-pytz" ,python-pytz))) (home-page "https://github.com/marshmallow-code/marshmallow") (synopsis "Convert complex datatypes to and from native -Python datatypes") + Python datatypes") (description "@code{marshmallow} provides a library for converting -complex datatypes to and from native Python datatypes.") + complex datatypes to and from native Python datatypes.") (license license:expat))) (define-public python-marshmallow-3.2 @@ -19364,8 +19423,8 @@ complex datatypes to and from native Python datatypes.") (synopsis "JSON:API 1.0 formatting with Marshmallow") (description "The marshmallow-jsonapi package provides a simple way to produce -@uref{https://jsonapi.org, JSON:API}-compliant data in any Python Web framework. -It includes optional utilities to integrate with Flask.") + @uref{https://jsonapi.org, JSON:API}-compliant data in any Python Web framework. + It includes optional utilities to integrate with Flask.") (license license:expat))) (define-public python-apispec @@ -19397,8 +19456,8 @@ It includes optional utilities to integrate with Flask.") (home-page "https://github.com/marshmallow-code/apispec") (synopsis "Swagger/OpenAPI specification generator") (description "@code{python-apispec} is a pluggable API specification -generator. It currently supports the OpenAPI specification, formerly known -as Swagger.") + generator. It currently supports the OpenAPI specification, formerly known + as Swagger.") (license license:expat))) (define-public python-flasgger @@ -19442,7 +19501,7 @@ as Swagger.") (home-page "https://github.com/rochacbruno/flasgger/") (synopsis "Extract Swagger specs from your Flask project") (description "@code{python-flasgger} allows extracting Swagger specs -from your Flask project. It is a fork of Flask-Swagger.") + from your Flask project. It is a fork of Flask-Swagger.") (license license:expat))) (define-public python-swagger-spec-validator @@ -19465,7 +19524,7 @@ from your Flask project. It is a fork of Flask-Swagger.") "https://github.com/Yelp/swagger_spec_validator") (synopsis "Validation of Swagger specifications") (description "@code{swagger_spec_validator} provides a library for -validating Swagger API specifications.") + validating Swagger API specifications.") (license license:asl2.0))) (define-public python-apache-libcloud @@ -19494,7 +19553,7 @@ validating Swagger API specifications.") (substitute* "libcloud/test/compute/test_ssh_client.py" (("class ShellOutSSHClientTests") "@unittest.skip(\"Guix container doesn't have ssh service\") -class ShellOutSSHClientTests")) + class ShellOutSSHClientTests")) #t)) (add-before 'check 'copy-secret (lambda _ @@ -19515,7 +19574,7 @@ class ShellOutSSHClientTests")) (home-page "https://libcloud.apache.org/") (synopsis "Unified Cloud API") (description "@code{libcloud} is a Python library for interacting with -many of the popular cloud service providers using a unified API.") + many of the popular cloud service providers using a unified API.") (license license:asl2.0))) (define-public python-smmap @@ -19534,7 +19593,7 @@ many of the popular cloud service providers using a unified API.") (home-page "https://github.com/Byron/smmap") (synopsis "Python sliding window memory map manager") (description "@code{smmap} is a pure Python implementation of a sliding -window memory map manager.") + window memory map manager.") (license license:bsd-3))) (define-public python2-smmap @@ -19558,13 +19617,13 @@ window memory map manager.") (lambda* (#:key inputs outputs #:allow-other-keys) (add-installed-pythonpath inputs outputs) (invoke "python" "-c" - "from regex.test_regex import test_main; test_main()")))))) - (home-page "https://bitbucket.org/mrabarnett/mrab-regex") - (synopsis "Alternative regular expression module") - (description "This regular expression implementation is backwards- + "from regex.test_regex import test_main ; test_main()")))))) + (home-page "https://bitbucket.org/mrabarnett/mrab-regex") + (synopsis "Alternative regular expression module") + (description "This regular expression implementation is backwards- compatible with the standard @code{re} module, but offers additional functionality like full case-folding for case-insensitive matches in Unicode.") - (license license:psfl))) + (license license:psfl))) (define-public python2-regex (package-with-python2 python-regex)) @@ -25480,13 +25539,13 @@ dictionaries.") (define-public pyzo (package (name "pyzo") - (version "4.11.2") + (version "4.11.4") (source (origin (method url-fetch) (uri (pypi-uri "pyzo" version)) (sha256 - (base32 "1jk5f79lj09vnsdk9h01w21p9h49z2hhf8xhkx8471pjbg9vrlzr")))) + (base32 "18djnzx9wwlhxk0v2gcpmwnn3iw572n7gkdyh7ghh92yxck6qqkl")))) (build-system python-build-system) (arguments `(#:phases @@ -25494,8 +25553,7 @@ dictionaries.") (add-before 'check 'fix-home-directory (lambda _ ;; Tests fail with "Permission denied: '/homeless-shelter'". - (setenv "HOME" "/tmp") - #t))) + (setenv "HOME" "/tmp")))) ;; Tests fail with "Uncaught Python exception: python: undefined ;; symbol: objc_getClass". #:tests? #f)) @@ -27566,6 +27624,53 @@ cons cells in Python.") systems in Python.") (license license:bsd-3))) +(define-public python-dotenv + (package + (name "python-dotenv") + (version "0.19.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-dotenv" version)) + (sha256 + (base32 "0pv5ygpr6syc6zkw21in4ysqs3k7qaxk9m1g5pzlafwm3silkpm5")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? inputs outputs #:allow-other-keys) + (when tests? + (add-installed-pythonpath inputs outputs) + (setenv "PATH" (string-append (getenv "PATH") ":" + (assoc-ref outputs "out") "/bin")) + ;; Skip the ipython tests. + (delete-file "tests/test_ipython.py") + (invoke "python" "-m" "pytest"))))))) + (propagated-inputs + `(("python-click" ,python-click))) + (native-inputs + `(("python-mock" ,python-mock) + ("python-pytest" ,python-pytest) + ("python-sh" ,python-sh))) + (home-page "https://github.com/theskumar/python-dotenv") + (synopsis "Setup environment variables according to .env files") + (description + "This package provides the @code{python-dotenv} Python module to read +key-value pairs from a @code{.env} file and set them as environment variables.") + (license license:bsd-3))) + +(define-public python-dotenv-0.13.0 + (package (inherit python-dotenv) + (name "python-dotenv") + (version "0.13.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-dotenv" version)) + (sha256 + (base32 + "0x5dagmfn31phrbxlwacw3s4w5vibv8fxqc62nqcdvdhjsy0k69v")))))) (define-public date2name (let ((commit "6c8f37277e8ec82aa50f90b8921422be30c4e798") @@ -28021,6 +28126,143 @@ simple mock/record and a complete capture/replay framework.") interfaces.") (license license:bsd-3))) +(define-public python-orgparse + (package + (name "python-orgparse") + (version "0.3.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "orgparse" version)) + (sha256 + (base32 "14iv4pg3rma9560plg0w943x04mr2cmrssda43y2d1x9acrd2n71")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "pytest" "-vv" "orgparse/tests"))))))) + (native-inputs + `(("python-pytest" ,python-pytest) + ("python-setuptools-scm" ,python-setuptools-scm))) + (home-page "https://github.com/karlicoss/orgparse") + (synopsis "Emacs Org mode parser in Python") + (description + "This package is a Python module for reading Emacs Org mode files.") + (license license:bsd-3))) + +(define-public dynaconf + (package + (name "dynaconf") + (version "3.1.7") + (source + (origin + (method git-fetch) + (uri + (git-reference + (url "https://github.com/rochacbruno/dynaconf") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0pjyjsdzairpn5vq8nzddhxwxmr18grn272nj31wcy2ipwdl3c3h")) + (patches (search-patches "dynaconf-unvendor-deps.patch")) + (modules '((guix build utils))) + (snippet '(begin + ;; Remove vendored dependencies + (let ((unvendor '("click" "dotenv" "ruamel" "toml"))) + (with-directory-excursion "dynaconf/vendor" + (for-each delete-file-recursively unvendor)) + (with-directory-excursion "dynaconf/vendor_src" + (for-each delete-file-recursively unvendor))))))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? outputs #:allow-other-keys) + (when tests? + (setenv "PATH" + (string-append (assoc-ref outputs "out") "/bin:" + (getenv "PATH"))) + ;; These tests depend on hvac and a live Vault process. + (delete-file "tests/test_vault.py") + (invoke "make" "test_only"))))))) + (propagated-inputs + `(("python-click" ,python-click) + ("python-configobj" ,python-configobj) + ("python-dotenv" ,python-dotenv-0.13.0) + ("python-ruamel.yaml" ,python-ruamel.yaml) + ("python-toml" ,python-toml))) + (native-inputs + `(("python-django" ,python-django) + ("python-flask" ,python-flask) + ("python-pytest" ,python-pytest-6) + ("python-pytest-cov" ,python-pytest-cov) + ("python-pytest-mock" ,python-pytest-mock))) + (home-page "https://www.dynaconf.com/") + (synopsis "The dynamic configurator for your Python project") + (description + "This package provides @code{dynaconf} the dynamic configurator manager for +your Python project. It provides features such as: + +@itemize +@item Inspired by the @url{https://12factor.net/config, 12-factor application guide}; +@item Settings management (default values, validation, parsing, templating); +@item Protection of sensitive information (passwords/tokens); +@item Multiple file formats @code{toml|yaml|json|ini|py} and also customizable +loaders; +@item Full support for environment variables to override existing settings +(dotenv support included); +@item Optional layered system for multiple environments @code{[default, +development, testing, production]}; +@item Built-in support for Hashicorp Vault and Redis as settings and secrets storage; +@item Built-in extensions for Django and Flask web frameworks; +@item CLI for common operations such as @code{init, list, write, validate, export}. +@end itemize") + (license license:expat))) + +(define-public pudb + (package + (name "pudb") + (version "2021.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pudb" version)) + (sha256 + (base32 "0p16pvzfa3w02ybg3n0iy5rs23z4rz4a42lb8wh3mcq62y9ik2w7")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'check 'fix-read-only-home + (lambda _ + (setenv "HOME" "/tmp"))) + (replace 'check + (lambda* (#:key inputs outputs tests? #:allow-other-keys) + (when tests? + (add-installed-pythonpath inputs outputs) + (invoke "pytest"))))))) + (native-inputs + `(("python-numpy" ,python-numpy) + ("python-pytest" ,python-pytest) + ("python-pytest-mock" ,python-pytest-mock))) + (propagated-inputs + `(("python-jedi" ,python-jedi) + ("python-pygments" ,python-pygments) + ("python-urwid" ,python-urwid) + ("python-urwid-readline" ,python-urwid-readline))) + (home-page "https://documen.tician.de/pudb/") + (synopsis "Console-based Python debugger") + (description + "@command{pudb} is a full-screen, console-based Python debugger providing +all the niceties of modern GUI-based debuggers in a more lightweight and +keyboard-friendly package.") + (license license:expat))) + (define-public python-iwlib (package (name "python-iwlib") diff --git a/gnu/packages/racket.scm b/gnu/packages/racket.scm index 661443e0c3..eab0eb09c2 100644 --- a/gnu/packages/racket.scm +++ b/gnu/packages/racket.scm @@ -3,6 +3,7 @@ ;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2020 Pierre Neidhardt <mail@ambrevar.xyz> ;;; Copyright © 2021 Philip McGrath <philip@philipmcgrath.com> +;;; Copyright © 2021 jgart <jgart@dismail.de> ;;; ;;; This file is part of GNU Guix. ;;; @@ -128,7 +129,7 @@ (define-public racket-minimal (package (name "racket-minimal") - (version "8.2") ; note: remember to also update racket! + (version "8.3") ; note: remember to also update racket! (source (origin (method git-fetch) @@ -136,11 +137,9 @@ (url "https://github.com/racket/racket") (commit (string-append "v" version)))) (sha256 - "061bhiyjlvazph0dj9i3i3x2q5z53rp8h5cjwg3frjimkr45lncn") + "1i1jnv1wb0kanfg47hniafx2vhwjc33qqx66lq7wkf5hbmgsyws3") (file-name (git-file-name name version)) - (patches (search-patches "racket-minimal-sh-via-rktio.patch" - ;; Remove the following in version 8.3: - "racket-minimal-backport-1629887.patch")) + (patches (search-patches "racket-minimal-sh-via-rktio.patch")) (modules '((guix build utils))) (snippet (with-imported-modules '((guix build utils)) @@ -427,7 +426,7 @@ Chez Scheme.") %installer-mirrors)) (sha256 (base32 - "10sgzsraxzxp1k2y2wvz8rcjwvhbcd6k72l9lyqr34yazlwfdz26")) + "0jdr0y7scvv2a3sq456ifrgq0yfsbiwavdf2m86zmrapp481mby4")) (snippet #~(begin (use-modules (guix build utils) @@ -530,7 +529,7 @@ Chez Scheme.") (delete 'install)) ;; we still don't have these: #:tests? #f)) - (synopsis "A programmable programming language in the Scheme family") + (synopsis "Programmable programming language in the Scheme family") (description "Racket is a general-purpose programming language in the Scheme family, with a large set of libraries and a compiler based on Chez Scheme. Racket is diff --git a/gnu/packages/radio.scm b/gnu/packages/radio.scm index 00161d847f..09fd153965 100644 --- a/gnu/packages/radio.scm +++ b/gnu/packages/radio.scm @@ -2078,6 +2078,7 @@ voice formats.") ("qtdeclarative" ,qtdeclarative) ("qtlocation" ,qtlocation) ("qtmultimedia" ,qtmultimedia) + ("qtquickcontrols2" ,qtquickcontrols2) ("qtserialport" ,qtserialport) ("qtspeech" ,qtspeech) ("qtwebsockets" ,qtwebsockets) diff --git a/gnu/packages/ruby.scm b/gnu/packages/ruby.scm index 1cbc3d84f5..020532fe14 100644 --- a/gnu/packages/ruby.scm +++ b/gnu/packages/ruby.scm @@ -6526,7 +6526,7 @@ lock with a counter.") (define-public ruby-oj (package (name "ruby-oj") - (version "3.10.1") + (version "3.13.9") (source (origin (method git-fetch) @@ -6538,7 +6538,7 @@ lock with a counter.") (file-name (git-file-name name version)) (sha256 (base32 - "0i5xjx4sh816zx2c1a4d1q67k7vllg5jnnc4jy6zhbmwi1dvp5vw")))) + "0a24zd28y58nyhjxgrpn2k9p72vzj3zbmdrcsbhwbdycj7nn9fpd")))) (build-system ruby-build-system) (arguments '(#:test-target "test_all" @@ -10799,7 +10799,7 @@ interface. It allows Jekyll to rebuild your site when a file changes.") (define-public ruby-parallel (package (name "ruby-parallel") - (version "1.13.0") + (version "1.21.0") (source (origin (method git-fetch) @@ -10809,7 +10809,7 @@ interface. It allows Jekyll to rebuild your site when a file changes.") (file-name (git-file-name name version)) (sha256 (base32 - "1isqzbqxz2ndad4i5z3lb9ldrhaijfncj8bmffv04sq44sv87ikv")))) + "1xqjcvl3gq3shvrqp8wc3fbqibzh4mf1yczq6np9gd79558dwj3w")))) (build-system ruby-build-system) (arguments `(;; TODO 3 test failures diff --git a/gnu/packages/security-token.scm b/gnu/packages/security-token.scm index cc8840bb10..537f43cb89 100644 --- a/gnu/packages/security-token.scm +++ b/gnu/packages/security-token.scm @@ -13,6 +13,7 @@ ;;; Copyright © 2021 Brice Waegeneire <brice@waegenei.re> ;;; Copyright © 2021 Sergey Trofimov <sarg@sarg.org.ru> ;;; Copyright © 2021 Dhruvin Gandhi <contact@dhruvin.dev> +;;; Copyright © 2021 Ahmad Jarara <git@ajarara.io> ;;; ;;; This file is part of GNU Guix. ;;; @@ -45,6 +46,7 @@ #:use-module (gnu packages base) #:use-module (gnu packages curl) #:use-module (gnu packages check) + #:use-module (gnu packages compression) #:use-module (gnu packages crates-io) #:use-module (gnu packages docbook) #:use-module (gnu packages documentation) @@ -146,7 +148,12 @@ readers and is needed to communicate with such devices through the ("cyrus-sasl" ,cyrus-sasl))) (arguments `(#:configure-flags - (list "--disable-static") + (list "--disable-static" + + ;; With the (prettier) pinentry enabled, eid-viewer will skip + ;; crucial dialogue when used with card readers with built-in + ;; keypads such as the Digipass 870, and possibly others too. + "--disable-pinentry") #:phases (modify-phases %standard-phases (replace 'bootstrap @@ -157,9 +164,11 @@ readers and is needed to communicate with such devices through the (("/bin/sh") (which "sh")) (("^(GITDESC=).*" _ match) (string-append match ,version "\n"))) (invoke "sh" "./bootstrap.sh")))))) - (synopsis "Belgian eID Middleware") - (description "The Belgian eID Middleware is required to authenticate with -online services using the Belgian electronic identity card.") + (synopsis "Belgian electronic identity card (eID) middleware") + (description "The Belgian eID middleware is required to authenticate with +online services and sign digital documents with Belgian identity cards. + +It requires a running pcscd service and a compatible card reader.") (home-page "https://github.com/Fedict/eid-mw") (license license:lgpl3))) @@ -778,3 +787,36 @@ used for online authentication with electronic German ID cards and residence titles. To use this app, a supported RFID card reader or NFC-enabled smart phone is required.") (license license:eupl1.2))) + +(define-public libfido2 + (package + (name "libfido2") + (version "1.9.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "git://github.com/Yubico/libfido2") + (commit version))) + (file-name (git-file-name name version)) + (sha256 (base32 "12zy4cnlcffcb64lsx8198y09j1dwi0bcn9rr82q6i1k950yzd3p")))) + (native-inputs `(("pkg-config" ,pkg-config))) + (inputs + `(("zlib" ,zlib) + ("udev" ,eudev) + ("libcbor" ,libcbor) + ("openssl" ,openssl))) + (build-system cmake-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + ;; regress tests enabled only for debug builds + (delete 'check)))) + (synopsis "Library functionality and command-line tools for FIDO devices") + (description "libfido2 provides library functionality and command-line +tools to communicate with a FIDO device over USB, and to verify attestation +and assertion signatures. + +libfido2 supports the FIDO U2F (CTAP 1) and FIDO 2.0 (CTAP 2) protocols.") + (license license:bsd-2) + (home-page "https://github.com/Yubico/libfido2"))) diff --git a/gnu/packages/ssh.scm b/gnu/packages/ssh.scm index c6de2736e3..5181e9e378 100644 --- a/gnu/packages/ssh.scm +++ b/gnu/packages/ssh.scm @@ -63,6 +63,7 @@ #:use-module (gnu packages python-web) #:use-module (gnu packages python-xyz) #:use-module (gnu packages readline) + #:use-module (gnu packages security-token) #:use-module (gnu packages texinfo) #:use-module (gnu packages tls) #:use-module (gnu packages xorg) @@ -199,6 +200,7 @@ a server that supports the SSH-2 protocol.") (native-inputs `(("groff" ,groff) ("pkg-config" ,pkg-config))) (inputs `(("libedit" ,libedit) + ("libfido2" ,libfido2) ("openssl" ,openssl) ,@(if (hurd-target?) '() @@ -229,6 +231,9 @@ a server that supports the SSH-2 protocol.") '() '("--with-pam")) + ;; supports creation and use of ecdsa-sk, ed25519-sk keys + "--with-security-key-builtin" + ;; "make install" runs "install -s" by default, ;; which doesn't work for cross-compiled binaries ;; because it invokes 'strip' instead of @@ -831,15 +836,16 @@ framework.") (define-public clustershell (package (name "clustershell") - (version "1.8.3") + (version "1.8.4") (source (origin - (method url-fetch) - (uri (string-append "https://github.com/cea-hpc/clustershell/releases" - "/download/v" version - "/ClusterShell-" version ".tar.gz")) + (method git-fetch) + (uri (git-reference + (url "https://github.com/cea-hpc/clustershell") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) (sha256 - (base32 "1qdcgh733szwj9r1gambrgfkizvbjci0bnnkds9a8mnyb3sasnan")))) + (base32 "11b87vyamcw4rvgxz74jxwkr9ly0h9ldp2wqsi5wc19p0r06la5j")))) (build-system python-build-system) (inputs `(("openssh" ,openssh))) (propagated-inputs `(("python-pyyaml" ,python-pyyaml))) @@ -851,8 +857,7 @@ framework.") (substitute* "lib/ClusterShell/Worker/Ssh.py" (("info\\(\"ssh_path\"\\) or \"ssh\"") (string-append "info(\"ssh_path\") or \"" - ssh "/bin/ssh\""))) - #t)))))) + ssh "/bin/ssh\""))))))))) (home-page "https://cea-hpc.github.io/clustershell/") (synopsis "Scalable event-driven Python framework for cluster administration") (description diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index b09076106f..dc1dc6a66a 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -1501,13 +1501,13 @@ from knitr Rmarkdown.") (define-public r-microbenchmark (package (name "r-microbenchmark") - (version "1.4-7") + (version "1.4.9") (source (origin (method url-fetch) (uri (cran-uri "microbenchmark" version)) (sha256 (base32 - "1xl4m4yl4h2zcjiz8wsa7f3sh55qg2xr3sgpvz18rlix6b3173r6")))) + "1lpzpffnjiwnxxl0jhrvyj88fvxqksnpccbpq953xwqf6ypjqga4")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/microbenchmark/") (synopsis "Accurate timing functions for R") @@ -1563,13 +1563,13 @@ you call it again with the same arguments it returns the pre-computed value.") (define-public r-crayon (package (name "r-crayon") - (version "1.4.1") + (version "1.4.2") (source (origin (method url-fetch) (uri (cran-uri "crayon" version)) (sha256 (base32 - "1ir963s6zk9l32fw257y54p7898cd7z7yazkn9h6j2cdfhpf9dh8")))) + "0mxq87qsvz5znfncrb6yjchzv6iwpn9lr386i02y6xiycizkjd7f")))) (build-system r-build-system) (home-page "https://github.com/gaborcsardi/crayon") (synopsis "Colored terminal output for R") @@ -1683,14 +1683,14 @@ like tidy evaluation.") (define-public r-tibble (package (name "r-tibble") - (version "3.1.5") + (version "3.1.6") (source (origin (method url-fetch) (uri (cran-uri "tibble" version)) (sha256 (base32 - "1ryv1r3cah1s8dyqdhcb0yl81r384jvgc4d1q9zwsrrsd2x8fqys")))) + "14l2i6ri3v5y0h8g0ahc4kz0pdqsp5yabxk2w8wavss6y44xjcsv")))) (build-system r-build-system) (propagated-inputs `(("r-ellipsis" ,r-ellipsis) @@ -1999,6 +1999,16 @@ inference for statistical models.") (define-public python2-statsmodels (let ((stats (package-with-python2 python-statsmodels))) (package/inherit stats + ;; Version 0.11.1 and later does not work with Python 2. It may build + ;; fine but loading modules fails. + (version "0.9.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "statsmodels" version)) + (sha256 + (base32 + "0fxs8a7sp4d7jvqlm36yi45i2d28kjfvraf9q8i9jr1chhxgjqb4")))) (propagated-inputs `(("python2-pytz" ,python2-pytz) ("python2-numpy" ,python2-numpy) @@ -2145,14 +2155,14 @@ limited to R.") (define-public r-backports (package (name "r-backports") - (version "1.2.1") + (version "1.3.0") (source (origin (method url-fetch) (uri (cran-uri "backports" version)) (sha256 (base32 - "1mf2nz78l97lbxyagv55bcxrny51ds8g28h307cfa1g3ayylp0x2")))) + "0bc14x4gyw4gnvm4hrvg5cmmrq449kfza3l14wdgp642ra8iw8sg")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/backports") (synopsis "Reimplementations of functions introduced since R 3.0.0") @@ -2428,13 +2438,13 @@ functions make it easy to control additional request components.") (define-public r-git2r (package (name "r-git2r") - (version "0.28.0") + (version "0.29.0") (source (origin (method url-fetch) (uri (cran-uri "git2r" version)) (sha256 (base32 - "1wjmbs9cmm16pm3g0rmqp7cxxyh95m5lgx4fx5bpgj6j466i8vff")))) + "13nlrhma6kavvhranb43w3003vadfkyrn2f4l3r63iqavj0s3xzq")))) (build-system r-build-system) (inputs `(("libgit2" ,libgit2) @@ -2558,13 +2568,13 @@ time-of-day values, based on the @code{difftime} class.") (define-public r-readr (package (name "r-readr") - (version "2.0.2") + (version "2.1.0") (source (origin (method url-fetch) (uri (cran-uri "readr" version)) (sha256 (base32 - "05bnvcc55i0xjilfrqx3700mwiz8sgihq1wxlbvvr8nxa7bmxc4q")))) + "03d7y4k9w5vcm7fwlcaw715ff7d953i92jwbp7ynrqcr09kw6zm0")))) (build-system r-build-system) (propagated-inputs `(("r-cli" ,r-cli) @@ -2651,13 +2661,13 @@ well as additional utilities such as panel and axis annotation functions.") (define-public r-rcpparmadillo (package (name "r-rcpparmadillo") - (version "0.10.7.0.0") + (version "0.10.7.3.0") (source (origin (method url-fetch) (uri (cran-uri "RcppArmadillo" version)) (sha256 (base32 - "1x35xb5yfslsdpaz9msl5p9f7gilnbkhwvq7pbycwasvkp2fma01")))) + "0qk25x8naci76fqcd8jkv8gnba6sj61vkv9yf8498fwff1kvf41p")))) (properties `((upstream-name . "RcppArmadillo"))) (build-system r-build-system) (propagated-inputs @@ -3074,13 +3084,13 @@ multiple breakpoints are allowed.") (define-public r-snow (package (name "r-snow") - (version "0.4-3") + (version "0.4-4") (source (origin (method url-fetch) (uri (cran-uri "snow" version)) (sha256 (base32 - "1n3n8pva9s34fvlw32yng0x416lmbv7q1fsd0ywa4kikmxym64l5")))) + "1j8kvf3imxijsqkdjz4i9s7qggfxqrpas46y5wz6za92y937yn44")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/snow") (synopsis "Support for simple parallel computing in R") @@ -3499,13 +3509,13 @@ using the multicore functionality of the parallel package.") "datatables-extensions/Select")))) (package (name "r-dt") - (version "0.19") + (version "0.20") (source (origin (method url-fetch) (uri (cran-uri "DT" version)) (sha256 (base32 - "04rv1rprqlc56hycxpqkbmwmq4wjvmanq2lwxrflmf2s46pbv9ms")) + "17xs18i439p15agyk7z2xyyrwgrpn5pw09kd3jwxn7qhxi4pyvf6")) (modules '((guix build utils))) (snippet '(for-each delete-file @@ -3650,13 +3660,13 @@ analysis of large sparse or dense matrices.") (define-public r-glmnet (package (name "r-glmnet") - (version "4.1-2") + (version "4.1-3") (source (origin (method url-fetch) (uri (cran-uri "glmnet" version)) (sha256 - (base32 "1kfd8kfhapx2cxw6qnkbs502c3kya4pd9qmf0mk76cdlq1c2paq6")))) + (base32 "0nij8v44b5dvp1vc843sfkl9ds83n6g687m2p37q1rdn82m3bg34")))) (build-system r-build-system) (native-inputs `(("gfortran" ,gfortran) @@ -3664,6 +3674,8 @@ analysis of large sparse or dense matrices.") (propagated-inputs `(("r-foreach" ,r-foreach) ("r-matrix" ,r-matrix) + ("r-rcpp" ,r-rcpp) + ("r-rcppeigen" ,r-rcppeigen) ("r-shape" ,r-shape) ("r-survival" ,r-survival))) (home-page "https://www.jstatsoft.org/article/view/v033i01") @@ -5103,14 +5115,14 @@ models, generalized linear models and model-based clustering.") (define-public r-mclust (package (name "r-mclust") - (version "5.4.7") + (version "5.4.8") (source (origin (method url-fetch) (uri (cran-uri "mclust" version)) (sha256 (base32 - "08scl72llpinfijiyx14yqvmx8lma9jvh8h92v9ynnzfr9kadxa5")))) + "0j79a1nidwxl62x8j97k09qjxladp9irw5z1x1q5gyy6zxskvh8i")))) (build-system r-build-system) (native-inputs `(("gfortran" ,gfortran) @@ -5273,14 +5285,14 @@ generally.") (define-public r-robust (package (name "r-robust") - (version "0.5-0.0") + (version "0.6-1") (source (origin (method url-fetch) (uri (cran-uri "robust" version)) (sha256 (base32 - "1ks5scp8bnicl9j1r8yrmz668fjs6ifdmi540zw6d2ck500bbw42")))) + "0z8i0qqlsa6vpl457qir3dlsynhjfn2g22436d776vxwyqjx4vs9")))) (build-system r-build-system) (propagated-inputs `(("r-fit-models" ,r-fit-models) @@ -5519,14 +5531,14 @@ expected shortfall risk are also included.") (define-public r-nloptr (package (name "r-nloptr") - (version "1.2.2.2") + (version "1.2.2.3") (source (origin (method url-fetch) (uri (cran-uri "nloptr" version)) (sha256 (base32 - "0whkilb85k4wixvr3k7rygfw1rcs1fs9h8c18kz4p3y1k9hsj3p8")))) + "1zznk9f2w2g02zqzay21k8xqzfvc6icxfzp6bx2wpd77sm7vf25g")))) (build-system r-build-system) (native-inputs `(("r-knitr" ,r-knitr) ; for building vignettes @@ -5629,13 +5641,13 @@ Companion to Applied Regression, Third Edition, Sage.") (define-public r-car (package (name "r-car") - (version "3.0-11") + (version "3.0-12") (source (origin (method url-fetch) (uri (cran-uri "car" version)) (sha256 - (base32 "0b2l35656bi75hfvnjhzhlnrnbpjn0vv7nvny8gn65gm0rr94b5k")))) + (base32 "00kk8l71508f73kyn21is1mx6kjbrzdq3ls94c5ajhiqmvpsd6dq")))) (build-system r-build-system) (propagated-inputs `(("r-abind" ,r-abind) @@ -5647,8 +5659,7 @@ Companion to Applied Regression, Third Edition, Sage.") ("r-nlme" ,r-nlme) ("r-nnet" ,r-nnet) ("r-pbkrtest" ,r-pbkrtest) - ("r-quantreg" ,r-quantreg) - ("r-rio" ,r-rio))) + ("r-quantreg" ,r-quantreg))) (native-inputs `(("r-knitr" ,r-knitr))) (home-page "https://r-forge.r-project.org/projects/car/") @@ -5915,14 +5926,14 @@ easy and fun.") (define-public r-fdrtool (package (name "r-fdrtool") - (version "1.2.16") + (version "1.2.17") (source (origin (method url-fetch) (uri (cran-uri "fdrtool" version)) (sha256 (base32 - "1aap4k1l3a9m43374xq688mqnzkgqx8l021li262r3h1xr4adpp7")))) + "1pf554vb902vavgqc4c0kgghywbgcvr3lkkr414bxngavcd60lil")))) (build-system r-build-system) (home-page "http://strimmerlab.org/software/fdrtool/") (synopsis "Estimation of false discovery rates and higher criticism") diff --git a/gnu/packages/suckless.scm b/gnu/packages/suckless.scm index 0348aa865a..b6e7a63d30 100644 --- a/gnu/packages/suckless.scm +++ b/gnu/packages/suckless.scm @@ -378,22 +378,21 @@ numbers of user-defined menu items efficiently.") `(#:tests? #f ; no tests #:make-flags (list (string-append "CC=" ,(cc-for-target)) + (string-append "TERMINFO=" + (assoc-ref %outputs "out") + "/share/terminfo") (string-append "PREFIX=" %output)) #:phases (modify-phases %standard-phases - (delete 'configure) - (add-after 'unpack 'inhibit-terminfo-install - (lambda _ - (substitute* "Makefile" - (("\ttic .*") "")) - #t))))) + (delete 'configure)))) (inputs `(("libx11" ,libx11) ("libxft" ,libxft) ("fontconfig" ,fontconfig) ("freetype" ,freetype))) (native-inputs - `(("pkg-config" ,pkg-config))) + `(("ncurses" ,ncurses) ;provides tic program + ("pkg-config" ,pkg-config))) (home-page "https://st.suckless.org/") (synopsis "Simple terminal emulator") (description diff --git a/gnu/packages/terminals.scm b/gnu/packages/terminals.scm index 79d7af42ad..292c101407 100644 --- a/gnu/packages/terminals.scm +++ b/gnu/packages/terminals.scm @@ -102,6 +102,40 @@ #:use-module (gnu packages xorg) #:use-module (srfi srfi-26)) +(define-public libptytty + (package + (name "libptytty") + (version "2.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/yusiwen/libptytty") + (commit "b9694ea18e0dbd78213f55233a430325c13ad63e"))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1g8by1m6ya4r47p137mw4ddml40js0zh6mdb9n6ib49ayngv8ak3")))) + (build-system cmake-build-system) + (arguments + `(#:tests? #f)) ; no test suite + (home-page "https://github.com/yusiwen/libptytty") + (synopsis + "Portable, secure PTY/TTY and @file{utmp}/@file{wtmp}/@file{lastlog} handling") + (description + "Libptytty is a small C/C++ library to manage pseudo-ttys in a uniform way, +created out of frustration over the many differences of PTY/TTY handling in +different operating systems. + +In addition to mere PTY/TTY management, it supports updating the session +database at @file{utmp}, and @file{wtmp}/@file{lastlog} for login shells. + +It also supports @code{fork}ing after start-up and dropping privileges in the +calling process. This reduces the potential attack surface: if the calling +process were to be compromised by the user starting the program, there would be +less to gain, as only the helper process is running with privileges (e.g., +@code{setuid}/@code{setgid}).") + (license license:gpl2+))) + (define-public tilda (package (name "tilda") @@ -834,7 +868,7 @@ a server/client mode.") (define-public sakura (package (name "sakura") - (version "3.8.3") + (version "3.8.4") (source (origin (method url-fetch) (uri (string-append "https://launchpad.net/sakura/trunk/" @@ -842,7 +876,7 @@ a server/client mode.") ".tar.bz2")) (sha256 (base32 - "1r2kpvxx21r407s07m5p5x0dam6x863991nmcv6k5ap873fxqh2h")))) + "1d8n32xnj21q2xx13xs2r9cfjaq31mxiyhx6d57x9cwnhwb11xn3")))) (build-system cmake-build-system) (arguments '(#:tests? #f)) ; no check phase diff --git a/gnu/packages/text-editors.scm b/gnu/packages/text-editors.scm index c5cec0a3b2..2d1f508446 100644 --- a/gnu/packages/text-editors.scm +++ b/gnu/packages/text-editors.scm @@ -925,14 +925,14 @@ Octave. TeXmacs is completely extensible via Guile.") (define-public scintilla (package (name "scintilla") - (version "5.1.3") + (version "5.1.4") (source (origin (method url-fetch) (uri (let ((v (apply string-append (string-split version #\.)))) (string-append "https://www.scintilla.org/scintilla" v ".tgz"))) (sha256 - (base32 "1zgzpbl7yzyqwqlk7l8s8g74ddg02wa6f0w4dkwdp7fp7ayjn9a2")))) + (base32 "0rd3scfs3dwaj85ds8yrcp1r8z0lifi7qv2464k6n1c995amr0nw")))) (build-system gnu-build-system) (arguments `(#:make-flags (list "GTK3=1" "CC=gcc" "-Cgtk") diff --git a/gnu/packages/textutils.scm b/gnu/packages/textutils.scm index c86cfd7de1..b2a4dcd3ee 100644 --- a/gnu/packages/textutils.scm +++ b/gnu/packages/textutils.scm @@ -1268,13 +1268,13 @@ such as ISO-2022-JP, Shift_JIS, EUC-JP, UTF-8, UTF-16 or UTF-32.") (define-public python-pandocfilters (package (name "python-pandocfilters") - (version "1.4.3") + (version "1.5.0") (source (origin (method url-fetch) (uri (pypi-uri "pandocfilters" version)) (sha256 - (base32 "1sq675dg4barb5949xxz4d5gk2ly524hi1p1xgwb3d1l0nsznqxw")))) + (base32 "0f3sb8q85dbwliv46cc1yvpy4r00qp4by5x8751kn8vx6c1rarqb")))) (build-system python-build-system) (home-page "https://github.com/jgm/pandocfilters") (synopsis "Python module for writing Pandoc filters") diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm index b6205fa41c..7868b5c6fb 100644 --- a/gnu/packages/video.scm +++ b/gnu/packages/video.scm @@ -55,6 +55,7 @@ ;;; Copyright © 2021 Thiago Jung Bauermann <bauermann@kolabnow.com> ;;; Copyright © 2021 Petr Hodina <phodina@protonmail.com> ;;; Copyright © 2021 Robin Templeton <robin@terpri.org> +;;; Copyright © 2021 Aleksandr Vityazev <avityazev@posteo.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -101,6 +102,7 @@ #:use-module (gnu packages avahi) #:use-module (gnu packages backup) #:use-module (gnu packages base) + #:use-module (gnu packages bash) #:use-module (gnu packages bison) #:use-module (gnu packages boost) #:use-module (gnu packages build-tools) @@ -1109,7 +1111,10 @@ H.264 (MPEG-4 AVC) video streams.") (substitute* (find-files "lib" "\\.pm$") (("\"youtube-dl\"") (format #f "\"~a/bin/youtube-dl\"" - (assoc-ref inputs "youtube-dl")))) + (assoc-ref inputs "youtube-dl"))) + (("\"yt-dlp\"") + (format #f "\"~a/bin/yt-dlp\"" + (assoc-ref inputs "yt-dlp")))) (substitute* (find-files "bin" ".*-viewer$") (("'ffmpeg'") (format #f "'~a/bin/ffmpeg'" @@ -1122,7 +1127,10 @@ H.264 (MPEG-4 AVC) video streams.") (assoc-ref inputs "xdg-utils"))) (("'youtube-dl'") (format #f "'~a/bin/youtube-dl'" - (assoc-ref inputs "youtube-dl")))))) + (assoc-ref inputs "youtube-dl"))) + (("'yt-dlp'") + (format #f "'~a/bin/yt-dlp'" + (assoc-ref inputs "yt-dlp")))))) (add-after 'install 'install-xdg (lambda args (apply (assoc-ref copy:%standard-phases 'install) @@ -1175,7 +1183,8 @@ H.264 (MPEG-4 AVC) video streams.") ("perl-uri-escape" ,perl-uri-escape) ("wget" ,wget) ("xdg-utils" ,xdg-utils) - ("youtube-dl" ,youtube-dl))) + ("youtube-dl" ,youtube-dl) + ("yt-dlp" ,yt-dlp))) (propagated-inputs `(("dconf" ,dconf))) (home-page "https://github.com/trizen/pipe-viewer") @@ -2217,13 +2226,72 @@ fork of mplayer2 and MPlayer. It shares some features with the former projects while introducing many more.") (license license:gpl2+))) +(define-public smplayer + (package + (name "smplayer") + (version "21.10.0") + (source (origin + (method url-fetch) + (uri (string-append + "mirror://sourceforge/smplayer/SMPlayer/" version + "/smplayer-" version ".tar.bz2")) + (sha256 + (base32 + "12nvcl0cfix1xay9hfi7856vg4lpv8y5b0a22212bsjbvl5g22rc")))) + (build-system qt-build-system) + (native-inputs + `(("qttools" ,qttools))) + (inputs + `(("bash-minimal" ,bash-minimal) + ("qtbase" ,qtbase-5) + ("zlib" ,zlib) + ("mpv" ,mpv))) + (arguments + `(#:tests? #false ; no tests + #:make-flags (list (string-append "PREFIX=" (assoc-ref %outputs "out")) + (string-append "CC=" ,(cc-for-target)) + ;; A KLUDGE to turn off invoking lrelease on the + ;; project for now, because it fails consistently + ;; with "WARNING: Could not find qmake spec + ;; 'default'". See below. + "LRELEASE=true") + #:phases + (modify-phases %standard-phases + (delete 'configure) + ;; Due to the above, we must run lrelease separately on each .ts file + ;; (as opposed to running `lrelease-pro smplayer.pro` for the entire + ;; project, as the Makefile does normally without the above kludge). + (add-after 'build 'compile-ts-files + (lambda _ + (for-each (lambda (file) + (invoke "lrelease" file)) + (find-files "./" "\\.ts$")) + #true)) + (add-after 'install 'wrap-executable + (lambda* (#:key inputs outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (mpv (assoc-ref inputs "mpv"))) + (wrap-program (string-append out "/bin/smplayer") + `("PATH" ":" prefix + ,(list (string-append mpv "/bin"))))) + #true))))) + (home-page "https://www.smplayer.info") + (synopsis "Complete front-end for MPlayer, a media player") + (description "SMPlayer is a graphical user interface (GUI) for +MPlayer, which is capable of playing almost all known video and audio +formats. Apart from providing access for the most common and useful +options of MPlayer, SMPlayer adds other interesting features like the +possibility to play Youtube videos, download subtitles, remember +the last played position, etc.") + (license license:gpl2+))) + (define-public gnome-mpv (deprecated-package "gnome-mpv" celluloid)) (define-public mpv-mpris (package (name "mpv-mpris") - (version "0.5") + (version "0.6") (source (origin (method git-fetch) @@ -2232,8 +2300,7 @@ projects while introducing many more.") (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 - "07p6li5z38pkfd40029ag2jqx917vyl3ng5p2i4v5a0af14slcnk")))) + (base32 "03gldk149i2108w3ylyfmci77kdq4whdzfavh7hjviwyj534101r")))) (build-system copy-build-system) (arguments '(#:install-plan @@ -2560,7 +2627,7 @@ other site that youtube-dl supports.") (define-public you-get (package (name "you-get") - (version "0.4.1500") + (version "0.4.1555") (source (origin (method git-fetch) (uri (git-reference @@ -2569,7 +2636,7 @@ other site that youtube-dl supports.") (file-name (git-file-name name version)) (sha256 (base32 - "02wkmq6bjg9iz0kccsgs192aiky99l2jnw1xs6zjhvjvq7jyvf7s")))) + "0gn86i6nfsw395r9a3i88nv2g08s5bgjps7w4qawb9gvk4h7zqap")))) (build-system python-build-system) (inputs `(("ffmpeg" ,ffmpeg))) ; for multi-part and >=1080p videos @@ -2585,8 +2652,7 @@ other site that youtube-dl supports.") ;; Don't blindly replace all occurrences of ‘'ffmpeg'’: the ;; same string is also used when sniffing ffmpeg's output. (("(FFMPEG == |\\()'ffmpeg'" _ prefix) - (string-append prefix "'" ffmpeg "'"))) - #t)))) + (string-append prefix "'" ffmpeg "'"))))))) #:tests? #f)) ; XXX some tests need Internet access (synopsis "Download videos, audio, or images from Web sites") (description @@ -3164,7 +3230,7 @@ from sites like Twitch.tv and pipes them into a video player of choice.") (define-public mlt (package (name "mlt") - (version "7.0.1") + (version "7.2.0") (source (origin (method git-fetch) @@ -3173,7 +3239,7 @@ from sites like Twitch.tv and pipes them into a video player of choice.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "13c5miph9jjbz69dhy0zvbkk5zbb05dr3vraaci0d5fdbrlhyscf")))) + (base32 "17d4gs46ca3n0qg6z69hl6mmllnqj2id8ccrv8fyz8c5zm55ghqm")))) (build-system cmake-build-system) (arguments `(#:tests? #f ;requires "Kwalify" @@ -3587,14 +3653,15 @@ scaling and VA-API (if available) to accelerate video decoding.") (define-public recordmydesktop (package (name "recordmydesktop") - (version "0.3.8.1") + (version "0.4.0") (source (origin (method url-fetch) - (uri (string-append "mirror://sourceforge/" name "/" name "/" - version "/recordmydesktop-" version ".tar.gz")) + (uri (string-append "https://github.com/Enselic/" + name "/releases/download/v" version + "/recordmydesktop-" version ".tar.gz")) (sha256 (base32 - "133kkl5j0r877d41bzj7kj0vf3xm8x80yyx2n8nqxrva304f58ik")))) + "17kjgmkl45zma64a5dg1hyvnjkzk4vl8milgi6ic7hlsbmywpig7")))) (build-system gnu-build-system) (inputs `(("popt" ,popt) ("zlib" ,zlib) @@ -3607,7 +3674,7 @@ scaling and VA-API (if available) to accelerate video decoding.") ("alsa-lib" ,alsa-lib) ("libvorbis" ,libvorbis) ("libtheora" ,libtheora))) - (home-page "http://recordmydesktop.sourceforge.net/") + (home-page "https://enselic.github.io/recordmydesktop/") (synopsis "Desktop session video recorder") (description "recordMyDesktop is a command-line tool that captures the activity in @@ -4831,7 +4898,7 @@ transitions, and effects and then export your film to many common formats.") (define-public shotcut (package (name "shotcut") - (version "21.09.20") + (version "21.10.31") (source (origin (method git-fetch) @@ -4840,7 +4907,7 @@ transitions, and effects and then export your film to many common formats.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "1y46n5gmlayfl46l0vhg5g5dbbc0sg909mxb68sia0clkaas8xrh")))) + (base32 "0jgv6wl65gf6c4nmfica8k9vbgn3w3594d1phx1mb7zjvyy9y97k")))) (build-system qt-build-system) (arguments `(#:tests? #f ;there are no tests diff --git a/gnu/packages/vim.scm b/gnu/packages/vim.scm index 2537f8e305..b2228bed4c 100644 --- a/gnu/packages/vim.scm +++ b/gnu/packages/vim.scm @@ -476,7 +476,7 @@ trouble using them, because you do not have to remember each snippet name.") (define-public vim-fugitive (package (name "vim-fugitive") - (version "3.4") + (version "3.6") (source (origin (method git-fetch) @@ -485,8 +485,7 @@ trouble using them, because you do not have to remember each snippet name.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 - "0vgyp0rabrxjy9mpdnf221vjk3q38pls7az884gvnjjzdly18xmp")))) + (base32 "17c3wzqkbzbf0nmlxpgk90yyv3d09209fqxqysand8bzb1cbfwzn")))) (build-system copy-build-system) (arguments '(#:install-plan @@ -1295,6 +1294,36 @@ by their scope. This means that for example methods in C++ are displayed under the class they are defined in.") (license license:vim))) +(define-public vim-nerdtree + (package + (name "vim-nerdtree") + (version "6.10.16") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/preservim/nerdtree") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1si8qla86ng8cffbmfrk9gss0i3912yw0f1ph4bsiq0kk837lccp")))) + (build-system copy-build-system) + (arguments + '(#:install-plan + '(("autoload" "share/vim/vimfiles/") + ("doc" "share/vim/vimfiles/") + ("lib" "share/vim/vimfiles/") + ("nerdtree_plugin" "share/vim/vimfiles/") + ("plugin" "share/vim/vimfiles/") + ("syntax" "share/vim/vimfiles/")))) + (home-page "https://github.com/preservim/nerdtree") + (synopsis "Tree explorer plugin for Vim") + (description + "The NERDTree is a file system explorer for the Vim editor. Using this +plugin, users can visually browse complex directory hierarchies, quickly open +files for reading or editing, and perform basic file system operations.") + (license license:wtfpl2))) + (define-public vim-nerdcommenter (let ((commit "a65465d321f2f8a74b2ffa540b9b87563f7e12e8") (revision "1")) diff --git a/gnu/packages/virtualization.scm b/gnu/packages/virtualization.scm index 41a55ba1bd..9008ba0560 100644 --- a/gnu/packages/virtualization.scm +++ b/gnu/packages/virtualization.scm @@ -440,7 +440,7 @@ server and embedded PowerPC, and S390 guests.") (define-public libx86emu (package (name "libx86emu") - (version "3.4") + (version "3.5") (home-page "https://github.com/wfeldt/libx86emu") (source (origin @@ -450,6 +450,8 @@ server and embedded PowerPC, and S390 guests.") (url home-page) (commit version))) (file-name (git-file-name name version)) + (sha256 + (base32 "11nj3y7maz9ch15b1c2b69gd8d7mpaha377zpdbvfsmg5w9zz93l")) (modules '((guix build utils))) (snippet @@ -460,9 +462,7 @@ server and embedded PowerPC, and S390 guests.") (substitute* "Makefile" (("GIT2LOG.*=.*$") "") (("GITDEPS.*=.*$") "") - (("BRANCH.*=.*$") "")))) - (sha256 - (base32 "0f8mwpgfyid26i9q77n2rlcr4zzc75jnjzmy2hc38gk3q71ijmwh")))) + (("BRANCH.*=.*$") "")))))) (build-system gnu-build-system) (arguments `(#:test-target "test" diff --git a/gnu/packages/vpn.scm b/gnu/packages/vpn.scm index 99277657e8..b06ca33868 100644 --- a/gnu/packages/vpn.scm +++ b/gnu/packages/vpn.scm @@ -303,14 +303,14 @@ endpoints.") (define-public strongswan (package (name "strongswan") - (version "5.9.3") + (version "5.9.4") (source (origin (method url-fetch) (uri (string-append "https://download.strongswan.org/strongswan-" version ".tar.bz2")) (sha256 - (base32 "1xy6c9c7bq5a5jmm04r9f9iqn39yrr1dkq81jhvpxsd4l1ban9ck")))) + (base32 "063mi0kdlpd7r7s3py35yf80hvrv3nrdfvxpyn7ns25gqajg3za5")))) (build-system gnu-build-system) (arguments `(#:phases @@ -328,8 +328,7 @@ endpoints.") (substitute* "src/libstrongswan/tests/suites/test_process.c" (("/bin/sh") (which "sh")) (("/bin/echo") (which "echo")) - (("cat") (which "cat"))) - #t)) + (("cat") (which "cat"))))) (add-before 'check 'set-up-test-environment (lambda* (#:key inputs #:allow-other-keys) (setenv "TZDIR" @@ -417,7 +416,7 @@ NAT-T and more.") ;; src/libstrongswan/plugins/pkcs11/pkcs11.h (license:non-copyleft "file://src/libstrongswan/plugins/pkcs11/pkcs11.h" - "pkcs11 contains a unknown permissive license. View the specific + "pkcs11 contains an unknown permissive license. View the specific file for more details.") ;; These files are not included in the ;; build, they are disabled through diff --git a/gnu/packages/web-browsers.scm b/gnu/packages/web-browsers.scm index 5ca68e0ee4..a3457cb62f 100644 --- a/gnu/packages/web-browsers.scm +++ b/gnu/packages/web-browsers.scm @@ -818,7 +818,7 @@ http, and https via third-party applications.") (define-public tinmop (package (name "tinmop") - (version "0.8.3") + (version "0.9.2") (source (origin (method git-fetch) @@ -827,13 +827,17 @@ http, and https via third-party applications.") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "117p1wxi5swmqw429qrswxz2zvp1dcaw2145gk6zxlgwln48qxl8")))) + (base32 "1cgx2g2kryfmcwqzzjzcpbdc6zzj10xc52gz0cj2dx5ylc0yg7k3")))) (build-system gnu-build-system) (native-inputs - `(("curl" ,curl) + `(("automake" ,automake) + ("autoreconf" ,autoconf) ("gettext" ,gnu-gettext) - ("gnupg" ,gnupg) - ("sbcl" ,sbcl))) + ("mandoc" , mandoc) + ("nano" ,nano) + ("openssl" ,openssl) + ("sbcl" ,sbcl) + ("xdg-utils" ,xdg-utils))) (inputs `(("access" ,sbcl-access) ("alexandria" ,sbcl-alexandria) @@ -856,8 +860,6 @@ http, and https via third-party applications.") ("local-time" ,sbcl-local-time) ("log4cl" ,sbcl-log4cl) ("marshal" ,sbcl-marshal) - ("nano" ,nano) - ("openssl" ,openssl) ("osicat" ,sbcl-osicat) ("parse-number" ,sbcl-parse-number) ("percent-encoding" ,sbcl-percent-encoding) @@ -865,8 +867,7 @@ http, and https via third-party applications.") ("sxql-composer" ,sbcl-sxql-composer) ("tooter" ,sbcl-tooter) ("unix-opts" ,sbcl-unix-opts) - ("usocket" ,sbcl-usocket) - ("xdg-utils" ,xdg-utils))) + ("usocket" ,sbcl-usocket))) (arguments `(#:tests? #f #:strip-binaries? #f @@ -876,11 +877,24 @@ http, and https via third-party applications.") (lambda _ (setenv "HOME" "/tmp") #t)) + (add-after 'unpack 'fix-configure.ac + (lambda _ + (delete-file "configure") + (substitute* "configure.ac" + (("AC_PATH_PROG.+CURL") + "dnl") + (("AC_PATH_PROGS.+GIT") + "dnl") + (("AC_PATH_PROG.+GPG") + "dnl")) + #t)) (add-after 'configure 'fix-asdf (lambda* (#:key inputs #:allow-other-keys) (substitute* "Makefile.in" (("LISP_COMPILER) ") - "LISP_COMPILER) --eval \"(require 'asdf)\" --eval \"(push \\\"$$(pwd)/\\\" asdf:*central-registry*)\" ")) + (string-concatenate + '("LISP_COMPILER) --eval \"(require 'asdf)\" " + "--eval \"(push \\\"$$(pwd)/\\\" asdf:*central-registry*)\" ")))) #t))))) (synopsis "Gemini and pleroma client with a terminal interface") (description @@ -892,14 +906,14 @@ interface.") (define-public telescope (package (name "telescope") - (version "0.5.2") + (version "0.6.1") (source (origin (method url-fetch) (uri (string-append "https://github.com/omar-polo/telescope/releases/download/" version "/telescope-" version ".tar.gz")) (sha256 - (base32 "0phvwhxvm63y68cyvzw5dk60yjzfv6bpxf5c4bl08daj3ia48fbk")))) + (base32 "1hm9gi6yz62h8yh2br85bgycr2xaf5lr7z4gl0p25g7d7qb53ixd")))) (build-system gnu-build-system) (arguments `(#:tests? #f)) ;no tests @@ -915,6 +929,32 @@ interface.") (description "Telescope is a w3m-like browser for Gemini.") (license license:x11))) +(define-public leo + ;; PyPi only provides a wheel. + (let ((commit "88cc10a87afe2ec86be06e6ea2bcd099f5360b74") + (version "1.0.4") + (revision "1")) + (package + (name "leo") + (version (git-version version revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/xyzshantaram/leo") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0jp4v4jw82qqynqqs7x35g5yvm1sd48cvbqh7j2r1ixw1z6ldhc4")))) + (build-system python-build-system) + (home-page "https://github.com/xyzshantaram/leo") + (synopsis "Gemini client written in Python") + (description + "@command{leo} is a gemini client written in Python with no external +dependencies that fully implements the Gemini spec. A list of URLs can be +saved to a file for further viewing in another window.") + (license license:expat)))) + (define-public av-98 (package (name "av-98") diff --git a/gnu/packages/web.scm b/gnu/packages/web.scm index 61aa79aebb..3d4ee58872 100644 --- a/gnu/packages/web.scm +++ b/gnu/packages/web.scm @@ -6015,13 +6015,13 @@ deployments.") (package (name "varnish") (home-page "https://varnish-cache.org/") - (version "7.0.0") + (version "7.0.1") (source (origin (method url-fetch) (uri (string-append home-page "_downloads/varnish-" version ".tgz")) (sha256 (base32 - "11z0pa618lh925ih67wmp1gqk7i46l486j4spjy71g1n3w5mqylc")))) + "0q265fzarz5530g8lasvfpgks8z1kq1yh7rn88bn2qfly3pmpry4")))) (build-system gnu-build-system) (arguments `(#:configure-flags (list (string-append "LDFLAGS=-Wl,-rpath=" %output "/lib") diff --git a/gnu/packages/wm.scm b/gnu/packages/wm.scm index 0d9ad91e77..cdd34bf237 100644 --- a/gnu/packages/wm.scm +++ b/gnu/packages/wm.scm @@ -46,6 +46,8 @@ ;;; Copyright © 2021 qblade <qblade@protonmail.com> ;;; Copyright © 2021 lasnesne <lasnesne@lagunposprasihopre.org> ;;; Copyright © 2021 Petr Hodina <phodina@protonmail.com> +;;; Copyright © 2021 jgart <jgart@dismail.de> +;;; Copyright © 2021 Disseminate Dissent <disseminatedissent@protonmail.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -2650,6 +2652,47 @@ capabilities. It is heavily inspired by the Calm Window manager(cwm).") program and unhides it after quitting.") (license license:gpl2))) +(define-public trayer-srg + (package + (name "trayer-srg") + (version "1.1.8") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/sargon/trayer-srg") + (commit (string-append "trayer-" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1mvhwaqa9bng9wh3jg3b7y8gl7nprbydmhg963xg0r076jyzv0cg")))) + (native-inputs + `(("libxmu" ,libxmu) + ("pkg-config" ,pkg-config))) + (inputs + `(("libx11" ,libx11) + ("gdk-pixbuf" ,gdk-pixbuf) + ("gtk+" ,gtk+-2))) + (build-system gnu-build-system) + (arguments + `(#:tests? #f ; There are no tests. + #:make-flags + (let ((out (assoc-ref %outputs "out"))) + (list (string-append "CC=" ,(cc-for-target)) + (string-append "PREFIX=" %output))) + #:phases + (modify-phases %standard-phases + (replace 'configure + (lambda* (#:key configure-flags #:allow-other-keys) + (apply invoke "./configure" configure-flags)))))) + (home-page "https://github.com/sargon/trayer-srg") + (synopsis "Minimal GTK based system tray") + (description + "@command{trayer} is small program designed to provide systray +functionality present in GNOME/KDE desktop enviroments for window managers +which do not support it.") + (license license:expat))) + (define-public wlogout (package (name "wlogout") diff --git a/gnu/packages/xdisorg.scm b/gnu/packages/xdisorg.scm index 7354023f64..8024691f71 100644 --- a/gnu/packages/xdisorg.scm +++ b/gnu/packages/xdisorg.scm @@ -119,6 +119,7 @@ #:use-module (gnu packages qt) #:use-module (gnu packages sphinx) #:use-module (gnu packages tcl) + #:use-module (gnu packages terminals) #:use-module (gnu packages xml) #:use-module (gnu packages xorg) #:use-module (gnu packages) @@ -1212,14 +1213,14 @@ compact configuration syntax.") (define-public rxvt-unicode (package (name "rxvt-unicode") - (version "9.26") + (version "9.30") (source (origin (method url-fetch) (uri (string-append "http://dist.schmorp.de/rxvt-unicode/Attic/" name "-" version ".tar.bz2")) (sha256 (base32 - "12y9p32q0v7n7rhjla0j2g9d5rj2dmwk20c9yhlssaaxlawiccb4")))) + "0badnkjsn3zps24r5iggj8k5v4f00npc77wqg92pcn1q5z8r677y")))) (build-system gnu-build-system) (arguments ;; This sets the destination when installing the necessary terminal @@ -1247,8 +1248,7 @@ compact configuration syntax.") TryExec=~@*~a/bin/urxvt~@ Icon=~@ Type=Application~%" - output))) - #t))) + output)))))) (add-after 'install 'install-desktop-urxvtc (lambda* (#:key outputs #:allow-other-keys) (let* ((output (assoc-ref outputs "out")) @@ -1265,10 +1265,10 @@ compact configuration syntax.") TryExec=~@*~a/bin/urxvtc~@ Icon=~@ Type=Application~%" - output))) - #t)))))) + output))))))))) (inputs - `(("libXft" ,libxft) + `(("libptytty" ,libptytty) + ("libXft" ,libxft) ("libX11" ,libx11) ("libXt" ,libxt))) (native-inputs diff --git a/gnu/packages/xorg.scm b/gnu/packages/xorg.scm index 410fef639b..21f4cae58e 100644 --- a/gnu/packages/xorg.scm +++ b/gnu/packages/xorg.scm @@ -6262,7 +6262,7 @@ to answer a question. Xmessage can also exit after a specified time.") (define-public xterm (package (name "xterm") - (version "369") + (version "370") (source (origin (method url-fetch) @@ -6272,7 +6272,7 @@ to answer a question. Xmessage can also exit after a specified time.") (string-append "ftp://ftp.invisible-island.net/xterm/" "xterm-" version ".tgz"))) (sha256 - (base32 "09jffsd46qsg6vfxlljds9pljwx9h4kh06kl94hkv2b4s146mvbi")))) + (base32 "10lc72spa69n9d7zg9nwhgwz70qzidp5i17jgw3lq3qg1a25sg4n")))) (build-system gnu-build-system) (arguments '(#:configure-flags '("--enable-wide-chars" "--enable-load-vt-fonts" diff --git a/gnu/services/admin.scm b/gnu/services/admin.scm index 763a4434e4..043517262f 100644 --- a/gnu/services/admin.scm +++ b/gnu/services/admin.scm @@ -149,7 +149,7 @@ for ROTATION." (define-record-type* <rottlog-configuration> rottlog-configuration make-rottlog-configuration rottlog-configuration? - (rottlog rottlog-rottlog ;package + (rottlog rottlog-rottlog ;file-like (default rottlog)) (rc-file rottlog-rc-file ;file-like (default (file-append rottlog "/etc/rc"))) diff --git a/gnu/services/auditd.scm b/gnu/services/auditd.scm index cffc226ec9..abde811f51 100644 --- a/gnu/services/auditd.scm +++ b/gnu/services/auditd.scm @@ -46,7 +46,7 @@ ignore\ndisk_error_action = syslog\n")) (define-record-type* <auditd-configuration> auditd-configuration make-auditd-configuration auditd-configuration? - (audit auditd-configuration-audit ; package + (audit auditd-configuration-audit ; file-like (default audit)) (configuration-directory auditd-configuration-configuration-directory)) ; file-like diff --git a/gnu/services/authentication.scm b/gnu/services/authentication.scm index d7efc48cd0..cb0ef6d85a 100644 --- a/gnu/services/authentication.scm +++ b/gnu/services/authentication.scm @@ -45,7 +45,7 @@ nslcd-service-type)) (define-configuration fprintd-configuration - (fprintd (package fprintd) + (fprintd (file-like fprintd) "The fprintd package")) (define (fprintd-dbus-service config) @@ -213,7 +213,7 @@ (define-configuration nslcd-configuration (nss-pam-ldapd - (package nss-pam-ldapd) + (file-like nss-pam-ldapd) "The NSS-PAM-LDAPD package to use.") ;; Runtime options diff --git a/gnu/services/avahi.scm b/gnu/services/avahi.scm index 2dcf1d9c1b..3b8d0512c7 100644 --- a/gnu/services/avahi.scm +++ b/gnu/services/avahi.scm @@ -52,7 +52,7 @@ (define-record-type* <avahi-configuration> avahi-configuration make-avahi-configuration avahi-configuration? - (avahi avahi-configuration-avahi ;<package> + (avahi avahi-configuration-avahi ;file-like (default avahi)) (debug? avahi-configuration-debug? ;Boolean (default #f)) diff --git a/gnu/services/base.scm b/gnu/services/base.scm index 20736eb13f..2631478b9e 100644 --- a/gnu/services/base.scm +++ b/gnu/services/base.scm @@ -560,7 +560,7 @@ down."))) (define-record-type* <rngd-configuration> rngd-configuration make-rngd-configuration rngd-configuration? - (rng-tools rngd-configuration-rng-tools) ;package + (rng-tools rngd-configuration-rng-tools) ;file-like (device rngd-configuration-device)) ;string (define rngd-service-type @@ -775,7 +775,7 @@ the message of the day, among other things." (define-record-type* <agetty-configuration> agetty-configuration make-agetty-configuration agetty-configuration? - (agetty agetty-configuration-agetty ;<package> + (agetty agetty-configuration-agetty ;file-like (default util-linux)) (tty agetty-configuration-tty) ;string | #f (term agetty-term ;string | #f @@ -1043,7 +1043,7 @@ the tty to run, among other things." (define-record-type* <mingetty-configuration> mingetty-configuration make-mingetty-configuration mingetty-configuration? - (mingetty mingetty-configuration-mingetty ;<package> + (mingetty mingetty-configuration-mingetty ;file-like (default mingetty)) (tty mingetty-configuration-tty) ;string (auto-login mingetty-auto-login ;string | #f @@ -1115,9 +1115,9 @@ the tty to run, among other things." ;; TODO: See nscd.conf in glibc for other options to add. (caches nscd-configuration-caches ;list of <nscd-cache> (default %nscd-default-caches)) - (name-services nscd-configuration-name-services ;list of <packages> + (name-services nscd-configuration-name-services ;list of file-like (default '())) - (glibc nscd-configuration-glibc ;<package> + (glibc nscd-configuration-glibc ;file-like (default glibc))) (define-record-type* <nscd-cache> nscd-cache make-nscd-cache @@ -1516,7 +1516,7 @@ archive' public keys, with GUIX." (define-record-type* <guix-configuration> guix-configuration make-guix-configuration guix-configuration? - (guix guix-configuration-guix ;<package> + (guix guix-configuration-guix ;file-like (default guix)) (build-group guix-configuration-build-group ;string (default "guixbuild")) @@ -1769,7 +1769,7 @@ proxy of 'guix-daemon'...~%") (define-record-type* <guix-publish-configuration> guix-publish-configuration make-guix-publish-configuration guix-publish-configuration? - (guix guix-publish-configuration-guix ;package + (guix guix-publish-configuration-guix ;file-like (default guix)) (port guix-publish-configuration-port ;number (default 80)) @@ -1924,9 +1924,9 @@ command that allows you to share pre-built binaries with others over HTTP."))) (define-record-type* <udev-configuration> udev-configuration make-udev-configuration udev-configuration? - (udev udev-configuration-udev ;<package> + (udev udev-configuration-udev ;file-like (default eudev)) - (rules udev-configuration-rules ;list of <package> + (rules udev-configuration-rules ;list of file-like (default '()))) (define (udev-rules-union packages) @@ -2225,8 +2225,10 @@ instance." (and device (begin (restart-on-EINTR (swapon device - #$(swap-space->flags-bit-mask - swap))) + #$(if (swap-space? swap) + (swap-space->flags-bit-mask + swap) + 0))) #t))))) (stop #~(lambda _ (let ((device #$device-lookup)) @@ -2246,7 +2248,7 @@ instance." (define-record-type* <gpm-configuration> gpm-configuration make-gpm-configuration gpm-configuration? - (gpm gpm-configuration-gpm ;package + (gpm gpm-configuration-gpm ;file-like (default gpm)) (options gpm-configuration-options ;list of strings (default %default-gpm-options))) diff --git a/gnu/services/cgit.scm b/gnu/services/cgit.scm index 94ca9e281a..bfc89a40a4 100644 --- a/gnu/services/cgit.scm +++ b/gnu/services/cgit.scm @@ -319,7 +319,7 @@ after this option will inherit the current section name.") ;; <repository-cgit-configuration>, <nginx-server-configuration>, <package>. (define-configuration cgit-configuration (package - (package cgit) + (file-like cgit) "The CGIT package.") (nginx (nginx-server-configuration-list (list %cgit-configuration-nginx)) @@ -673,7 +673,7 @@ for cgit to allow access to that repository.") (define-configuration opaque-cgit-configuration (cgit - (package cgit) + (file-like cgit) "The cgit package.") (cgitrc (string (configuration-missing-field 'opaque-cgit-configuration 'cgitrc)) diff --git a/gnu/services/cuirass.scm b/gnu/services/cuirass.scm index 83e63fe79c..a69c20adb8 100644 --- a/gnu/services/cuirass.scm +++ b/gnu/services/cuirass.scm @@ -85,7 +85,7 @@ (define-record-type* <cuirass-configuration> cuirass-configuration make-cuirass-configuration cuirass-configuration? - (cuirass cuirass-configuration-cuirass ;package + (cuirass cuirass-configuration-cuirass ;file-like (default cuirass)) (log-file cuirass-configuration-log-file ;string (default "/var/log/cuirass.log")) @@ -327,7 +327,7 @@ (define-record-type* <cuirass-remote-worker-configuration> cuirass-remote-worker-configuration make-cuirass-remote-worker-configuration cuirass-remote-worker-configuration? - (cuirass cuirass-remote-worker-configuration-cuirass ;package + (cuirass cuirass-remote-worker-configuration-cuirass ;file-like (default cuirass)) (workers cuirass-remote-worker-workers ;int (default 1)) diff --git a/gnu/services/cups.scm b/gnu/services/cups.scm index a9eeb3868b..2e86845e51 100644 --- a/gnu/services/cups.scm +++ b/gnu/services/cups.scm @@ -485,13 +485,13 @@ programs.") (serialize-space-separated-string-list field-name vars))) (define (package-list? val) - (and (list? val) (and-map package? val))) + (and (list? val) (and-map file-like? val))) (define (serialize-package-list field-name val) #f) (define-configuration cups-configuration (cups - (package cups) + (file-like cups) "The CUPS package.") (extensions (package-list (list brlaser cups-filters epson-inkjet-printer-escpr diff --git a/gnu/services/databases.scm b/gnu/services/databases.scm index 8d266c1cba..39225a4bd6 100644 --- a/gnu/services/databases.scm +++ b/gnu/services/databases.scm @@ -164,7 +164,7 @@ host all all ::1/128 md5")) (define-record-type* <postgresql-configuration> postgresql-configuration make-postgresql-configuration postgresql-configuration? - (postgresql postgresql-configuration-postgresql) ;<package> + (postgresql postgresql-configuration-postgresql) ;file-like (port postgresql-configuration-port (default 5432)) (locale postgresql-configuration-locale @@ -448,7 +448,7 @@ created after the PostgreSQL database is started."))) (define-record-type* <memcached-configuration> memcached-configuration make-memcached-configuration memcached-configuration? - (memcached memcached-configuration-memcached ;<package> + (memcached memcached-configuration-memcached ;file-like (default memcached)) (interfaces memcached-configuration-interfaces (default '("0.0.0.0"))) @@ -693,7 +693,7 @@ FLUSH PRIVILEGES; (define-record-type* <redis-configuration> redis-configuration make-redis-configuration redis-configuration? - (redis redis-configuration-redis ;<package> + (redis redis-configuration-redis ;file-like (default redis)) (bind redis-configuration-bind (default "127.0.0.1")) diff --git a/gnu/services/dbus.scm b/gnu/services/dbus.scm index a895c6374b..85a4c3ec9a 100644 --- a/gnu/services/dbus.scm +++ b/gnu/services/dbus.scm @@ -50,7 +50,7 @@ (define-record-type* <dbus-configuration> dbus-configuration make-dbus-configuration dbus-configuration? - (dbus dbus-configuration-dbus ;<package> + (dbus dbus-configuration-dbus ;file-like (default dbus)) (services dbus-configuration-services ;list of <package> (default '()))) @@ -300,9 +300,9 @@ tuples, are all set as environment variables when the bus daemon launches it." (define-record-type* <polkit-configuration> polkit-configuration make-polkit-configuration polkit-configuration? - (polkit polkit-configuration-polkit ;<package> + (polkit polkit-configuration-polkit ;file-like (default %default-polkit)) - (actions polkit-configuration-actions ;list of <package> + (actions polkit-configuration-actions ;list of file-like (default '()))) (define %default-polkit diff --git a/gnu/services/dns.scm b/gnu/services/dns.scm index 93055eba38..9b8603cc95 100644 --- a/gnu/services/dns.scm +++ b/gnu/services/dns.scm @@ -308,8 +308,8 @@ (error-out "remote id must be a non empty string.")))) (define (verify-knot-configuration config) - (unless (package? (knot-configuration-knot config)) - (error-out "knot configuration field must be a package.")) + (unless (file-like? (knot-configuration-knot config)) + (error-out "knot configuration field must be a file-like object.")) (unless (string? (knot-configuration-run-directory config)) (error-out "run-directory must be a string.")) (unless (list? (knot-configuration-includes config)) @@ -732,7 +732,7 @@ cache.size = 100 * MB dnsmasq-configuration make-dnsmasq-configuration dnsmasq-configuration? (package dnsmasq-configuration-package - (default dnsmasq)) ;package + (default dnsmasq)) ;file-like (no-hosts? dnsmasq-configuration-no-hosts? (default #f)) ;boolean (port dnsmasq-configuration-port @@ -905,7 +905,7 @@ cache.size = 100 * MB (define-configuration ddclient-configuration (ddclient - (package ddclient) + (file-like ddclient) "The ddclient package.") (daemon (integer 300) diff --git a/gnu/services/docker.scm b/gnu/services/docker.scm index c4d48676b5..846ebe8334 100644 --- a/gnu/services/docker.scm +++ b/gnu/services/docker.scm @@ -41,16 +41,16 @@ (define-configuration docker-configuration (docker - (package docker) + (file-like docker) "Docker daemon package.") (docker-cli - (package docker-cli) + (file-like docker-cli) "Docker client package.") (containerd - (package containerd) + (file-like containerd) "containerd package.") (proxy - (package docker-libnetwork-cmd-proxy) + (file-like docker-libnetwork-cmd-proxy) "The proxy package to support inter-container and outside-container loop-back communications.") (enable-proxy? diff --git a/gnu/services/file-sharing.scm b/gnu/services/file-sharing.scm index 72cd6478d6..e3d681b08f 100644 --- a/gnu/services/file-sharing.scm +++ b/gnu/services/file-sharing.scm @@ -259,7 +259,7 @@ type generated and used by Transmission clients, suitable for passing to the (define-configuration transmission-daemon-configuration ;; Settings internal to this service definition. (transmission - (package transmission) + (file-like transmission) "The Transmission package to use.") (stop-wait-period (non-negative-integer 10) diff --git a/gnu/services/ganeti.scm b/gnu/services/ganeti.scm index ef22d1a331..85adbd7362 100644 --- a/gnu/services/ganeti.scm +++ b/gnu/services/ganeti.scm @@ -190,7 +190,7 @@ (define-record-type* <ganeti-noded-configuration> ganeti-noded-configuration make-ganeti-noded-configuration ganeti-noded-configuration? - (ganeti ganeti-noded-configuration-ganeti ;<package> + (ganeti ganeti-noded-configuration-ganeti ;file-like (default ganeti)) (port ganeti-noded-configuration-port ;integer (default 1811)) @@ -256,7 +256,7 @@ for the node functions in the Ganeti system."))) (define-record-type* <ganeti-confd-configuration> ganeti-confd-configuration make-ganeti-confd-configuration ganeti-confd-configuration? - (ganeti ganeti-confd-configuration-ganeti ;<package> + (ganeti ganeti-confd-configuration-ganeti ;file-like (default ganeti)) (port ganeti-confd-configuration-port ;integer (default 1814)) @@ -298,7 +298,7 @@ related to the configuration of a Ganeti cluster."))) (define-record-type* <ganeti-wconfd-configuration> ganeti-wconfd-configuration make-ganeti-wconfd-configuration ganeti-wconfd-configuration? - (ganeti ganeti-wconfd-configuration-ganeti ;<package> + (ganeti ganeti-wconfd-configuration-ganeti ;file-like (default ganeti)) (no-voting? ganeti-wconfd-configuration-no-voting? ;Boolean (default #f)) @@ -389,7 +389,7 @@ appropriate requests to this daemon."))) (define-record-type* <ganeti-luxid-configuration> ganeti-luxid-configuration make-ganeti-luxid-configuration ganeti-luxid-configuration? - (ganeti ganeti-luxid-configuration-ganeti ;<package> + (ganeti ganeti-luxid-configuration-ganeti ;file-like (default ganeti)) (no-voting? ganeti-luxid-configuration-no-voting? ;Boolean (default #f)) @@ -436,7 +436,7 @@ be submitted via this daemon and it schedules and starts them."))) (define-record-type* <ganeti-rapi-configuration> ganeti-rapi-configuration make-ganeti-rapi-configuration ganeti-rapi-configuration? - (ganeti ganeti-rapi-configuration-ganeti ;<package> + (ganeti ganeti-rapi-configuration-ganeti ;file-like (default ganeti)) (require-authentication? ganeti-rapi-configuration-require-authentication? ;Boolean @@ -509,7 +509,7 @@ for Ganeti clusters."))) (define-record-type* <ganeti-kvmd-configuration> ganeti-kvmd-configuration make-ganeti-kvmd-configuration ganeti-kvmd-configuration? - (ganeti ganeti-kvmd-configuration-ganeti ;<package> + (ganeti ganeti-kvmd-configuration-ganeti ;file-like (default ganeti)) (debug? ganeti-kvmd-configuration-debug? ;Boolean (default #f))) @@ -555,7 +555,7 @@ communicated to Ganeti via a special file in the file system."))) (define-record-type* <ganeti-mond-configuration> ganeti-mond-configuration make-ganeti-mond-configuration ganeti-mond-configuration? - (ganeti ganeti-mond-configuration-ganeti ;<package> + (ganeti ganeti-mond-configuration-ganeti ;file-like (default ganeti)) (port ganeti-mond-configuration-port ;integer (default 1815)) @@ -596,7 +596,7 @@ provide the collected information through a HTTP interface."))) (define-record-type* <ganeti-metad-configuration> ganeti-metad-configuration make-ganeti-metad-configuration ganeti-metad-configuration? - (ganeti ganeti-metad-configuration-ganeti ;<package> + (ganeti ganeti-metad-configuration-ganeti ;file-like (default ganeti)) (port ganeti-metad-configuration-port ;integer (default 80)) @@ -642,7 +642,7 @@ information to OS install scripts or instances."))) (define-record-type* <ganeti-watcher-configuration> ganeti-watcher-configuration make-ganeti-watcher-configuration ganeti-watcher-configuration? - (ganeti ganeti-watcher-configuration-ganeti ;<package> + (ganeti ganeti-watcher-configuration-ganeti ;file-like (default ganeti)) (schedule ganeti-watcher-configuration-schedule ;list | string (default '(next-second-from @@ -705,7 +705,7 @@ is declared offline by known master candidates."))) (define-record-type* <ganeti-cleaner-configuration> ganeti-cleaner-configuration make-ganeti-cleaner-configuration ganeti-cleaner-configuration? - (ganeti ganeti-cleaner-configuration-ganeti ;<package> + (ganeti ganeti-cleaner-configuration-ganeti ;file-like (default ganeti)) (master-schedule ganeti-cleaner-configuration-master-schedule ;list | string ;; Run the master cleaner at 01:45 every day. diff --git a/gnu/services/getmail.scm b/gnu/services/getmail.scm index 933d820bc5..ce124f6b11 100644 --- a/gnu/services/getmail.scm +++ b/gnu/services/getmail.scm @@ -246,7 +246,7 @@ lines.") (symbol "unset") "A symbol to identify the getmail service.") (package - (package getmail) + (file-like getmail) "The getmail package to use.") (user (string "getmail") diff --git a/gnu/services/hurd.scm b/gnu/services/hurd.scm index 61d92b4bda..5cf37adeaf 100644 --- a/gnu/services/hurd.scm +++ b/gnu/services/hurd.scm @@ -42,7 +42,7 @@ (define-record-type* <hurd-console-configuration> hurd-console-configuration make-hurd-console-configuration hurd-console-configuration? - (hurd hurd-console-configuration-hurd ;package + (hurd hurd-console-configuration-hurd ;file-like (default hurd))) (define (hurd-console-shepherd-service config) @@ -80,7 +80,7 @@ (define-record-type* <hurd-getty-configuration> hurd-getty-configuration make-hurd-getty-configuration hurd-getty-configuration? - (hurd hurd-getty-configuration-hurd ;<package> + (hurd hurd-getty-configuration-hurd ;file-like (default hurd)) (tty hurd-getty-configuration-tty) ;string (baud-rate hurd-getty-configuration-baud-rate diff --git a/gnu/services/lirc.scm b/gnu/services/lirc.scm index e95f54280d..1f5adcdd5f 100644 --- a/gnu/services/lirc.scm +++ b/gnu/services/lirc.scm @@ -38,7 +38,7 @@ (define-record-type* <lirc-configuration> lirc-configuration make-lirc-configuration lirc-configuation? - (lirc lirc-configuration-lirc ;<package> + (lirc lirc-configuration-lirc ;file-like (default lirc)) (device lirc-configuration-device) ;string (driver lirc-configuration-driver) ;string diff --git a/gnu/services/mail.scm b/gnu/services/mail.scm index 72dc123f41..4ad6ddb534 100644 --- a/gnu/services/mail.scm +++ b/gnu/services/mail.scm @@ -498,7 +498,7 @@ as @code{#t}.)") (define-configuration dovecot-configuration (dovecot - (package dovecot) + (file-like dovecot) "The dovecot package.") (listen @@ -1472,7 +1472,7 @@ greyed out, instead of only later giving \"not selectable\" popup error. (define-configuration opaque-dovecot-configuration (dovecot - (package dovecot) + (file-like dovecot) "The dovecot package.") (string @@ -1764,7 +1764,7 @@ match from local for any action outbound (define-record-type* <exim-configuration> exim-configuration make-exim-configuration exim-configuration? - (package exim-configuration-package ;<package> + (package exim-configuration-package ;file-like (default exim)) (config-file exim-configuration-config-file ;file-like (default #f))) diff --git a/gnu/services/mcron.scm b/gnu/services/mcron.scm index 0e675607f3..23760ebda4 100644 --- a/gnu/services/mcron.scm +++ b/gnu/services/mcron.scm @@ -51,7 +51,7 @@ (define-record-type* <mcron-configuration> mcron-configuration make-mcron-configuration mcron-configuration? - (mcron mcron-configuration-mcron ;package + (mcron mcron-configuration-mcron ;file-like (default mcron)) (jobs mcron-configuration-jobs ;list of <mcron-job> (default '()))) diff --git a/gnu/services/messaging.scm b/gnu/services/messaging.scm index 0fcb7faf89..6ed55453db 100644 --- a/gnu/services/messaging.scm +++ b/gnu/services/messaging.scm @@ -333,7 +333,7 @@ can create such a file with: (define-all-configurations prosody-configuration (prosody - (package prosody) + (file-like prosody) "The Prosody package." global) @@ -623,7 +623,7 @@ See also @url{https://prosody.im/doc/modules/mod_muc}." (define-configuration opaque-prosody-configuration (prosody - (package prosody) + (file-like prosody) "The prosody package.") (prosody.cfg.lua diff --git a/gnu/services/monitoring.scm b/gnu/services/monitoring.scm index 5123a8c441..f15450eed5 100644 --- a/gnu/services/monitoring.scm +++ b/gnu/services/monitoring.scm @@ -247,7 +247,7 @@ Prometheus.") (define-configuration zabbix-server-configuration (zabbix-server - (package zabbix-server) + (file-like zabbix-server) "The zabbix-server package.") (user (string "zabbix") @@ -385,7 +385,7 @@ configuration file.")) (define-configuration zabbix-agent-configuration (zabbix-agent - (package zabbix-agentd) + (file-like zabbix-agentd) "The zabbix-agent package.") (user (string "zabbix") @@ -529,7 +529,7 @@ fastcgi_param PHP_VALUE \"post_max_size = 16M (define-configuration zabbix-front-end-configuration ;; TODO: Specify zabbix front-end package. ;; (zabbix- - ;; (package zabbix-front-end) + ;; (file-like zabbix-front-end) ;; "The zabbix-front-end package.") (nginx (nginx-server-configuration-list diff --git a/gnu/services/networking.scm b/gnu/services/networking.scm index 7e310b70ec..77841a18d4 100644 --- a/gnu/services/networking.scm +++ b/gnu/services/networking.scm @@ -311,7 +311,7 @@ Protocol (DHCP) client, on all the non-loopback network interfaces."))) (define-record-type* <dhcpd-configuration> dhcpd-configuration make-dhcpd-configuration dhcpd-configuration? - (package dhcpd-configuration-package ;<package> + (package dhcpd-configuration-package ;file-like (default isc-dhcp)) (config-file dhcpd-configuration-config-file ;file-like (default #f)) @@ -743,7 +743,7 @@ demand."))) ;;; can evaluate: (configuration->documentation 'opendht-configuration) (define-configuration/no-serialization opendht-configuration (opendht - (package opendht) + (file-like opendht) "The @code{opendht} package to use.") (peer-discovery? (boolean #false) @@ -1149,7 +1149,7 @@ and @command{wicd-curses} user interfaces." (default network-manager)) (dns network-manager-configuration-dns (default "default")) - (vpn-plugins network-manager-configuration-vpn-plugins ;list of <package> + (vpn-plugins network-manager-configuration-vpn-plugins ;list of file-like (default '()))) (define network-manager-activation @@ -1452,7 +1452,7 @@ whatever the thing is supposed to do)."))) (define-record-type* <wpa-supplicant-configuration> wpa-supplicant-configuration make-wpa-supplicant-configuration wpa-supplicant-configuration? - (wpa-supplicant wpa-supplicant-configuration-wpa-supplicant ;<package> + (wpa-supplicant wpa-supplicant-configuration-wpa-supplicant ;file-like (default wpa-supplicant)) (requirement wpa-supplicant-configuration-requirement ;list of symbols (default '(user-processes loopback syslogd))) @@ -2124,7 +2124,7 @@ of the IPFS peer-to-peer storage network."))) (define-record-type* <keepalived-configuration> keepalived-configuration make-keepalived-configuration keepalived-configuration? - (keepalived keepalived-configuration-keepalived ;<package> + (keepalived keepalived-configuration-keepalived ;file-like (default keepalived)) (config-file keepalived-configuration-config-file ;file-like (default #f))) diff --git a/gnu/services/nix.scm b/gnu/services/nix.scm index 619e3cae54..df04a85c22 100644 --- a/gnu/services/nix.scm +++ b/gnu/services/nix.scm @@ -50,7 +50,7 @@ (define-record-type* <nix-configuration> nix-configuration make-nix-configuration nix-configuration? - (package nix-configuration-package ;package + (package nix-configuration-package ;file-like (default nix)) (sandbox nix-configuration-sandbox ;boolean (default #t)) diff --git a/gnu/services/pm.scm b/gnu/services/pm.scm index 256c6a7fa7..d91f2b69ce 100644 --- a/gnu/services/pm.scm +++ b/gnu/services/pm.scm @@ -84,7 +84,7 @@ (define-configuration tlp-configuration (tlp - (package tlp) + (file-like tlp) "The TLP package.") (tlp-enable? @@ -421,7 +421,7 @@ shutdown on system startup.")) thermald-configuration? (ignore-cpuid-check? thermald-ignore-cpuid-check? ;boolean (default #f)) - (thermald thermald-thermald ;package + (thermald thermald-thermald ;file-like (default thermald))) (define (thermald-shepherd-service config) diff --git a/gnu/services/rsync.scm b/gnu/services/rsync.scm index 59faed78f6..6e27edde25 100644 --- a/gnu/services/rsync.scm +++ b/gnu/services/rsync.scm @@ -43,7 +43,7 @@ rsync-configuration make-rsync-configuration rsync-configuration? - (package rsync-configuration-package ; package + (package rsync-configuration-package ; file-like (default rsync)) (address rsync-configuration-address ; string | #f (default #f)) diff --git a/gnu/services/science.scm b/gnu/services/science.scm index 6f7ac91154..1414789de9 100644 --- a/gnu/services/science.scm +++ b/gnu/services/science.scm @@ -35,7 +35,7 @@ rshiny-configuration make-rshiny-configuration rshiny-configuration? - (package rshiny-configuration-package ; package + (package rshiny-configuration-package ; file-like (default r-shiny)) (binary rshiny-configuration-binary ; string (default "rshiny"))) diff --git a/gnu/services/shepherd.scm b/gnu/services/shepherd.scm index 7277273686..b44dbf9d9f 100644 --- a/gnu/services/shepherd.scm +++ b/gnu/services/shepherd.scm @@ -88,7 +88,7 @@ shepherd-configuration make-shepherd-configuration shepherd-configuration? (shepherd shepherd-configuration-shepherd - (default shepherd)) ; package + (default shepherd)) ; file-like (services shepherd-configuration-services (default '()))) ; list of <shepherd-service> diff --git a/gnu/services/sound.scm b/gnu/services/sound.scm index 55610f27e0..1217223a0c 100644 --- a/gnu/services/sound.scm +++ b/gnu/services/sound.scm @@ -55,7 +55,7 @@ (define-record-type* <alsa-configuration> alsa-configuration make-alsa-configuration alsa-configuration? - (alsa-plugins alsa-configuration-alsa-plugins ;<package> + (alsa-plugins alsa-configuration-alsa-plugins ;file-like (default alsa-plugins)) (pulseaudio? alsa-configuration-pulseaudio? ;boolean (default #t)) diff --git a/gnu/services/ssh.scm b/gnu/services/ssh.scm index e7bc6100f6..97f74a00f7 100644 --- a/gnu/services/ssh.scm +++ b/gnu/services/ssh.scm @@ -283,7 +283,7 @@ The other options should be self-descriptive." (define-record-type* <openssh-configuration> openssh-configuration make-openssh-configuration openssh-configuration? - ;; <package> + ;; file-like object (openssh openssh-configuration-openssh (default openssh)) ;; string @@ -763,7 +763,7 @@ object." (define-record-type* <webssh-configuration> webssh-configuration make-webssh-configuration webssh-configuration? - (package webssh-configuration-package ;package + (package webssh-configuration-package ;file-like (default webssh)) (user-name webssh-configuration-user-name ;string (default "webssh")) diff --git a/gnu/services/syncthing.scm b/gnu/services/syncthing.scm index 12ebe7c107..7c3d5b027d 100644 --- a/gnu/services/syncthing.scm +++ b/gnu/services/syncthing.scm @@ -37,7 +37,7 @@ (define-record-type* <syncthing-configuration> syncthing-configuration make-syncthing-configuration syncthing-configuration? - (syncthing syncthing-configuration-syncthing ;<package> + (syncthing syncthing-configuration-syncthing ;file-like (default syncthing)) (arguments syncthing-configuration-arguments ;list of strings (default '())) diff --git a/gnu/services/telephony.scm b/gnu/services/telephony.scm index fd90840324..7c83f13b2a 100644 --- a/gnu/services/telephony.scm +++ b/gnu/services/telephony.scm @@ -227,13 +227,13 @@ SET-ACCOUNT-DETAILS." (define-configuration/no-serialization jami-configuration (jamid - (package libring) + (file-like libring) "The Jami daemon package to use.") (dbus - (package dbus) + (file-like dbus) "The D-Bus package to use to start the required D-Bus session.") (nss-certs - (package nss-certs) + (file-like nss-certs) "The nss-certs package to use to provide TLS certificates.") (enable-logging? (boolean #t) @@ -755,7 +755,7 @@ normal user D-Bus session bus."))) (define-record-type* <murmur-configuration> murmur-configuration make-murmur-configuration murmur-configuration? - (package murmur-configuration-package ;<package> + (package murmur-configuration-package ;file-like (default mumble)) (user murmur-configuration-user (default "murmur")) diff --git a/gnu/services/version-control.scm b/gnu/services/version-control.scm index 3315e80c6f..defbd65c36 100644 --- a/gnu/services/version-control.scm +++ b/gnu/services/version-control.scm @@ -91,7 +91,7 @@ git-daemon-configuration make-git-daemon-configuration git-daemon-configuration? - (package git-daemon-configuration-package ;package + (package git-daemon-configuration-package ;file-like (default git)) (export-all? git-daemon-configuration-export-all ;boolean (default #f)) @@ -197,7 +197,7 @@ access to exported repositories under @file{/srv/git}." git-http-configuration make-git-http-configuration git-http-configuration? - (package git-http-configuration-package ;package + (package git-http-configuration-package ;file-like (default git)) (git-root git-http-configuration-git-root ;string (default "/srv/git")) diff --git a/gnu/services/virtualization.scm b/gnu/services/virtualization.scm index 1a5744ffbf..4222bb4353 100644 --- a/gnu/services/virtualization.scm +++ b/gnu/services/virtualization.scm @@ -134,10 +134,10 @@ (define-configuration libvirt-configuration (libvirt - (package libvirt) + (file-like libvirt) "Libvirt package.") (qemu - (package qemu) + (file-like qemu) "Qemu package.") (listen-tls? @@ -859,7 +859,7 @@ functionality of the kernel Linux."))) (define-configuration qemu-guest-agent-configuration (qemu - (package qemu-minimal) + (file-like qemu-minimal) "QEMU package.") (device (string "") @@ -974,7 +974,7 @@ that will be listening to receive secret keys on port 1004, TCP." hurd-vm-configuration? (os hurd-vm-configuration-os ;<operating-system> (default %hurd-vm-operating-system)) - (qemu hurd-vm-configuration-qemu ;<package> + (qemu hurd-vm-configuration-qemu ;file-like (default qemu-minimal)) (image hurd-vm-configuration-image ;string (thunked) diff --git a/gnu/services/vpn.scm b/gnu/services/vpn.scm index df84905eb3..6004e41d8d 100644 --- a/gnu/services/vpn.scm +++ b/gnu/services/vpn.scm @@ -302,7 +302,7 @@ client. Each file is named after the name of the client." (define-split-configuration openvpn-client-configuration openvpn-server-configuration ((openvpn - (package openvpn) + (file-like openvpn) "The OpenVPN package.") (pid-file @@ -561,7 +561,7 @@ is truncated and rewritten every minute.") (define-record-type* <strongswan-configuration> strongswan-configuration make-strongswan-configuration strongswan-configuration? - (strongswan strongswan-configuration-strongswan ;<package> + (strongswan strongswan-configuration-strongswan ;file-like (default strongswan)) (ipsec-conf strongswan-configuration-ipsec-conf ;string|#f (default #f)) @@ -704,7 +704,7 @@ strongSwan."))) (define-record-type* <wireguard-configuration> wireguard-configuration make-wireguard-configuration wireguard-configuration? - (wireguard wireguard-configuration-wireguard ;<package> + (wireguard wireguard-configuration-wireguard ;file-like (default wireguard-tools)) (interface wireguard-configuration-interface ;string (default "wg0")) diff --git a/gnu/services/web.scm b/gnu/services/web.scm index f1c3a2f75e..e5cc6343b5 100644 --- a/gnu/services/web.scm +++ b/gnu/services/web.scm @@ -535,7 +535,7 @@ (define-record-type* <nginx-configuration> nginx-configuration make-nginx-configuration nginx-configuration? - (nginx nginx-configuration-nginx ;<package> + (nginx nginx-configuration-nginx ;file-like (default nginx)) (log-directory nginx-configuration-log-directory ;string (default "/var/log/nginx")) @@ -552,9 +552,9 @@ (modules nginx-configuration-modules (default '())) (global-directives nginx-configuration-global-directives (default '((events . ())))) - (lua-package-path nginx-lua-package-path ;list of <package> + (lua-package-path nginx-lua-package-path ;list of file-like (default #f)) - (lua-package-cpath nginx-lua-package-cpath ;list of <package> + (lua-package-cpath nginx-lua-package-cpath ;list of file-like (default #f)) (extra-content nginx-configuration-extra-content (default "")) @@ -803,7 +803,7 @@ of index files." (define-record-type* <fcgiwrap-configuration> fcgiwrap-configuration make-fcgiwrap-configuration fcgiwrap-configuration? - (package fcgiwrap-configuration-package ;<package> + (package fcgiwrap-configuration-package ;file-like (default fcgiwrap)) (socket fcgiwrap-configuration-socket (default "tcp:127.0.0.1:9000")) @@ -872,7 +872,7 @@ of index files." (define-record-type* <php-fpm-configuration> php-fpm-configuration make-php-fpm-configuration php-fpm-configuration? - (php php-fpm-configuration-php ;<package> + (php php-fpm-configuration-php ;file-like (default php)) (socket php-fpm-configuration-socket (default (string-append "/var/run/php" @@ -1107,7 +1107,7 @@ a webserver.") hpcguix-web-configuration make-hpcguix-web-configuration hpcguix-web-configuration? - (package hpcguix-web-package (default hpcguix-web)) ;<package> + (package hpcguix-web-package (default hpcguix-web)) ;file-like ;; Specs is gexp of hpcguix-web configuration file (specs hpcguix-web-configuration-specs) @@ -1348,7 +1348,7 @@ files.") (define-record-type* <varnish-configuration> varnish-configuration make-varnish-configuration varnish-configuration? - (package varnish-configuration-package ;<package> + (package varnish-configuration-package ;file-like (default varnish)) (name varnish-configuration-name ;string (default "default")) diff --git a/gnu/services/xorg.scm b/gnu/services/xorg.scm index b6857a8202..82a7d25602 100644 --- a/gnu/services/xorg.scm +++ b/gnu/services/xorg.scm @@ -163,7 +163,7 @@ (define-record-type* <xorg-configuration> xorg-configuration make-xorg-configuration xorg-configuration? - (modules xorg-configuration-modules ;list of packages + (modules xorg-configuration-modules ;list of file-like (thunked) ; filter out modules not supported on current system (default (filter @@ -181,7 +181,7 @@ (default #f)) (extra-config xorg-configuration-extra-config ;list of strings (default '())) - (server xorg-configuration-server ;package + (server xorg-configuration-server ;file-like (default xorg-server)) (server-arguments xorg-configuration-server-arguments ;list of strings (default %default-xorg-server-arguments))) diff --git a/gnu/system/mapped-devices.scm b/gnu/system/mapped-devices.scm index 518dbc4fe8..96a381d5fe 100644 --- a/gnu/system/mapped-devices.scm +++ b/gnu/system/mapped-devices.scm @@ -192,7 +192,8 @@ option of @command{guix system}.\n") "Return a gexp that maps SOURCE to TARGET as a LUKS device, using 'cryptsetup'." (with-imported-modules (source-module-closure - '((gnu build file-systems))) + '((gnu build file-systems) + (guix build utils))) ;; For mkdir-p (match targets ((target) #~(let ((source #$(if (uuid? source) @@ -201,7 +202,12 @@ option of @command{guix system}.\n") ;; XXX: 'use-modules' should be at the top level. (use-modules (rnrs bytevectors) ;bytevector? ((gnu build file-systems) - #:select (find-partition-by-luks-uuid))) + #:select (find-partition-by-luks-uuid)) + ((guix build utils) #:select (mkdir-p))) + + ;; Create '/run/cryptsetup/' if it does not exist, as device locking + ;; is mandatory for LUKS2. + (mkdir-p "/run/cryptsetup/") ;; Use 'cryptsetup-static', not 'cryptsetup', to avoid pulling the ;; whole world inside the initrd (for when we're in an initrd). diff --git a/gnu/system/vm.scm b/gnu/system/vm.scm index a65397f585..2487539b61 100644 --- a/gnu/system/vm.scm +++ b/gnu/system/vm.scm @@ -712,7 +712,6 @@ with '-virtfs' options for the host file systems listed in SHARED-FS." "-device" "virtio-rng-pci,rng=guix-vm-rng" #$@(map virtfs-option shared-fs) - "-vga std" (format #f "-drive file=~a,if=virtio,cache=writeback,werror=report,readonly=on" #$image))) @@ -754,6 +753,8 @@ it is mostly useful when FULL-BOOT? is true." (define qemu-exec #~(list #+(file-append qemu "/bin/" (qemu-command (or target system))) + ;; Tells qemu to use the terminal it was started in for IO. + #$@(if graphic? '() #~("-nographic")) #$@(if full-boot? #~() #~("-kernel" #$(operating-system-kernel-file os) |