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author | Sharlatan Hellseher <sharlatanus@gmail.com> | 2023-11-05 14:56:20 +0000 |
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committer | Eric Bavier <bavier@posteo.net> | 2023-11-18 19:56:29 -0600 |
commit | f653560990e1704ca28133d761f0ff76755175f5 (patch) | |
tree | 173a32562db139497d96b76a68267b16dc5e99d6 /gnu/packages | |
parent | 6c077dd304f7ef1cc8d03151f913b5fa60a61b7a (diff) | |
download | guix-patches-f653560990e1704ca28133d761f0ff76755175f5.tar guix-patches-f653560990e1704ca28133d761f0ff76755175f5.tar.gz |
gnu: elemental: Update to 0.87.7-0.6eb15a0.
The build of elemental is failed on GCC 7+:
https://github.com/elemental/Elemental/issues/254
Fixed but not released yet in merge request:
https://github.com/elemental/Elemental/pull/259
* gnu/packages/maths.scm (elemental): Update to 0.87.7-0.6eb15a0.
Change-Id: I333f1de160489035f1a8875173abdd57c03ef777
Signed-off-by: Eric Bavier <bavier@posteo.net>
Diffstat (limited to 'gnu/packages')
-rw-r--r-- | gnu/packages/maths.scm | 109 |
1 files changed, 57 insertions, 52 deletions
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index ed1708c77b..6b9725bdcc 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -7593,60 +7593,65 @@ symmetric matrices.") (synopsis "Eigenvalue solvers for symmetric matrices (with MPI support)"))) (define-public elemental - (package - (name "elemental") - (version "0.87.7") - (source (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/elemental/Elemental") - (commit (string-append "v" version)))) - (file-name (git-file-name name version)) - (sha256 - (base32 - "1687xpjjzig27y2pnqv7hv09smpijyfdpz7qjgmcxf4shfajlfkc")))) - (build-system cmake-build-system) - (home-page "https://github.com/elemental/Elemental") - (native-inputs - (list gfortran)) - (inputs - `(("blas" ,openblas) - ("gfortran:lib" ,gfortran "lib") - ("gmp" ,gmp) - ("lapack" ,lapack) - ("metis" ,metis) - ("mpc" ,mpc) - ("mpfr" ,mpfr) - ("mpi" ,openmpi) - ("qd" ,qd))) - (arguments - `(#:build-type "Release" ;default RelWithDebInfo not supported - #:configure-flags `("-DEL_DISABLE_PARMETIS:BOOL=YES" - "-DEL_AVOID_COMPLEX_MPI:BOOL=NO" - "-DEL_CACHE_WARNINGS:BOOL=YES" - "-DEL_TESTS:BOOL=YES" - "-DCMAKE_INSTALL_LIBDIR=lib" - "-DGFORTRAN_LIB=gfortran") - #:phases (modify-phases %standard-phases - (add-before 'check 'mpi-setup - ,%openmpi-setup) - (add-before 'check 'setup-tests - (lambda _ - ;; Parallelism is done at the MPI layer. - (setenv "OMP_NUM_THREADS" "1") - #t)) - (add-after 'install 'remove-tests - (lambda* (#:key outputs #:allow-other-keys) - ;; Tests are installed, with no easy configuration - ;; switch to prevent this, so delete them. - (delete-file-recursively - (string-append (assoc-ref outputs "out") "/bin")) - #t))))) - (synopsis "Dense and sparse-direct linear algebra and optimization") - (description "Elemental is a modern C++ library for distributed-memory + ;; The build of 0.87.7 is failed for a long time due to new version of GCC. The + ;; latest commit has fixes. + ;; See https://github.com/elemental/Elemental/issues/254 + (let ((commit "6eb15a0da2a4998bf1cf971ae231b78e06d989d9") + (revision "0")) + (package + (name "elemental") + (version (git-version "0.87.7" revision commit)) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/elemental/Elemental") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "06xcs4ic60ndcf2hq19gr8yjwdsnphpcyhapab41rkw726z4lm7p")))) + (build-system cmake-build-system) + (home-page "https://github.com/elemental/Elemental") + (native-inputs + (list gfortran)) + (inputs + `(("blas" ,openblas) + ("gfortran:lib" ,gfortran "lib") + ("gmp" ,gmp) + ("lapack" ,lapack) + ("metis" ,metis) + ("mpc" ,mpc) + ("mpfr" ,mpfr) + ("mpi" ,openmpi) + ("qd" ,qd))) + (arguments + `(#:build-type "Release" ;default RelWithDebInfo not supported + #:configure-flags `("-DEL_DISABLE_PARMETIS:BOOL=YES" + "-DEL_AVOID_COMPLEX_MPI:BOOL=NO" + "-DEL_CACHE_WARNINGS:BOOL=YES" + "-DEL_TESTS:BOOL=YES" + "-DCMAKE_INSTALL_LIBDIR=lib" + "-DGFORTRAN_LIB=gfortran") + #:phases (modify-phases %standard-phases + (add-before 'check 'mpi-setup + ,%openmpi-setup) + (add-before 'check 'setup-tests + (lambda _ + ;; Parallelism is done at the MPI layer. + (setenv "OMP_NUM_THREADS" "1") + #t)) + (add-after 'install 'remove-tests + (lambda* (#:key outputs #:allow-other-keys) + ;; Tests are installed, with no easy configuration + ;; switch to prevent this, so delete them. + (delete-file-recursively + (string-append (assoc-ref outputs "out") "/bin")) + #t))))) + (synopsis "Dense and sparse-direct linear algebra and optimization") + (description "Elemental is a modern C++ library for distributed-memory dense and sparse-direct linear algebra, conic optimization, and lattice reduction.") - (license license:bsd-2))) + (license license:bsd-2)))) (define-public mcrl2 (package |