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| author | Ben Woodcroft <donttrustben@gmail.com> | 2017-01-01 16:37:08 +1000 |
|---|---|---|
| committer | Ben Woodcroft <donttrustben@gmail.com> | 2017-01-01 16:47:47 +1000 |
| commit | 25d84d3122b8de29a67d69e8ff5de6660b8d44c5 (patch) | |
| tree | 24d8b90335b20d51c2ac3cecdeb128abacae5718 /gnu/packages/patches | |
| parent | 322a583fcfff9f5173ad388ee876aa29d9f8edcc (diff) | |
| download | guix-patches-25d84d3122b8de29a67d69e8ff5de6660b8d44c5.tar guix-patches-25d84d3122b8de29a67d69e8ff5de6660b8d44c5.tar.gz | |
gnu: python-dendropy: Update to 4.2.0.
* gnu/packages/bioinformatics.scm (python-dendropy): Update to 4.2.0.
[source]: Remove patch.
(python2-dendropy)[source]: Use the same source as python-dendropy.
* gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: Remove
file.
* gnu/local.mk (dist_patch_DATA): Remove it.
Diffstat (limited to 'gnu/packages/patches')
| -rw-r--r-- | gnu/packages/patches/python-dendropy-exclude-failing-tests.patch | 21 |
1 files changed, 0 insertions, 21 deletions
diff --git a/gnu/packages/patches/python-dendropy-exclude-failing-tests.patch b/gnu/packages/patches/python-dendropy-exclude-failing-tests.patch deleted file mode 100644 index 288a58b06f..0000000000 --- a/gnu/packages/patches/python-dendropy-exclude-failing-tests.patch +++ /dev/null @@ -1,21 +0,0 @@ -diff --git a/dendropy/test/test_phylogenetic_distance_matrix.py b/dendropy/test/test_phylogenetic_distance_matrix.py -index 10c05f5..a18ba52 100644 ---- a/dendropy/test/test_phylogenetic_distance_matrix.py -+++ b/dendropy/test/test_phylogenetic_distance_matrix.py -@@ -793,7 +793,7 @@ class PdmUpgmaTree(PdmTreeChecker, unittest.TestCase): - expected_tree=expected_tree) - - class NodeToNodeDistancesTest(unittest.TestCase): -- -+ @unittest.expectedFailure - def test_distances(self): - ## get distances from ape - # library(ape) -@@ -825,6 +825,7 @@ class NodeToNodeDistancesTest(unittest.TestCase): - e = reference_table[nd1.label, nd2.label] - self.assertAlmostEqual(d, e) - -+ @unittest.expectedFailure - def test_mrca(self): - test_runs = [ - "hiv1.newick", |