summaryrefslogtreecommitdiff
path: root/gnu/packages/bioinformatics.scm
diff options
context:
space:
mode:
authorRicardo Wurmus <rekado@elephly.net>2021-12-07 15:28:13 +0100
committerRicardo Wurmus <rekado@elephly.net>2021-12-07 15:28:13 +0100
commit6e67cda7559d0e6aac8cdc9451476ca70776a01f (patch)
tree19897fd14edb418181d141914d226b3f75f25897 /gnu/packages/bioinformatics.scm
parent16474f85cf4bff540ee3dc173aea01fa25aed807 (diff)
downloadguix-patches-6e67cda7559d0e6aac8cdc9451476ca70776a01f.tar
guix-patches-6e67cda7559d0e6aac8cdc9451476ca70776a01f.tar.gz
gnu: python-schema-salad: Update to 8.2.20211116214159.
* gnu/packages/bioinformatics.scm (python-schema-salad): Update to 8.2.20211116214159. [arguments]: Remove trailing #T. [propagated-inputs]: Replace python-cachecontrol-0.11 with python-cachecontrol. [native-inputs]: Add python-black.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm12
1 files changed, 6 insertions, 6 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 82044d8115..cb20fcc970 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -2936,14 +2936,14 @@ accessing bigWig files.")
(define-public python-schema-salad
(package
(name "python-schema-salad")
- (version "7.1.20210316164414")
+ (version "8.2.20211116214159")
(source
(origin
(method url-fetch)
(uri (pypi-uri "schema-salad" version))
(sha256
(base32
- "04jaykdpgfnkrghvli5swxzqp7yba842am4bz42hcfljsmkrxvrk"))))
+ "005dh2y45x92zl8sf2sqjmfvcqr4hrz8dfckgkckv87003v7lwqc"))))
(build-system python-build-system)
(arguments
`(#:phases
@@ -2955,10 +2955,9 @@ accessing bigWig files.")
(("^def test_(secondaryFiles|outputBinding)" all)
(string-append "@pytest.mark.skip(reason="
"\"test requires network access\")\n"
- all)))
- #t)))))
+ all))))))))
(propagated-inputs
- `(("python-cachecontrol" ,python-cachecontrol-0.11)
+ `(("python-cachecontrol" ,python-cachecontrol)
("python-lockfile" ,python-lockfile)
("python-mistune" ,python-mistune)
("python-rdflib" ,python-rdflib)
@@ -2967,7 +2966,8 @@ accessing bigWig files.")
("python-ruamel.yaml" ,python-ruamel.yaml)
("python-typing-extensions" ,python-typing-extensions)))
(native-inputs
- `(("python-pytest" ,python-pytest)
+ `(("python-black" ,python-black)
+ ("python-pytest" ,python-pytest)
("python-pytest-runner" ,python-pytest-runner)))
(home-page "https://github.com/common-workflow-language/schema_salad")
(synopsis "Schema Annotations for Linked Avro Data (SALAD)")