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authorzimoun <zimon.toutoune@gmail.com>2021-03-15 14:01:31 +0100
committerRicardo Wurmus <rekado@elephly.net>2021-03-15 14:05:37 +0100
commit9949f459bff3980f59db8925a90891577e4f91d6 (patch)
treea8e771117abe7d0a05e6f0e644ba2d3fdf59ca9e /gnu/packages/bioinformatics.scm
parentd64e3a487ba890b1aa6b24b7be917f55f80740a8 (diff)
downloadguix-patches-9949f459bff3980f59db8925a90891577e4f91d6.tar
guix-patches-9949f459bff3980f59db8925a90891577e4f91d6.tar.gz
gnu: r-iranges: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-iranges): Move from here... * gnu/packages/bioconductor.scm (r-iranges): ...to here.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm29
1 files changed, 0 insertions, 29 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 1fcb436f0d..36ecf47467 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7691,35 +7691,6 @@ including VCF header and contents in RDF and JSON.")
(home-page "https://github.com/vcflib/bio-vcf")
(license license:expat)))
-(define-public r-iranges
- (package
- (name "r-iranges")
- (version "2.24.1")
- (source (origin
- (method url-fetch)
- (uri (bioconductor-uri "IRanges" version))
- (sha256
- (base32
- "01mx46a82vd3gz705pj0kk4wpxg683s8jqxchzjia3gz00b4qw52"))))
- (properties
- `((upstream-name . "IRanges")))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-biocgenerics" ,r-biocgenerics)
- ("r-s4vectors" ,r-s4vectors)))
- (home-page "https://bioconductor.org/packages/IRanges")
- (synopsis "Infrastructure for manipulating intervals on sequences")
- (description
- "This package provides efficient low-level and highly reusable S4 classes
-for storing ranges of integers, RLE vectors (Run-Length Encoding), and, more
-generally, data that can be organized sequentially (formally defined as
-@code{Vector} objects), as well as views on these @code{Vector} objects.
-Efficient list-like classes are also provided for storing big collections of
-instances of the basic classes. All classes in the package use consistent
-naming and share the same rich and consistent \"Vector API\" as much as
-possible.")
- (license license:artistic2.0)))
-
(define-public r-genomeinfodbdata
(package
(name "r-genomeinfodbdata")