diff options
| author | Charles <charles.b.jackson@protonmail.com> | 2021-09-18 00:05:55 -0500 |
|---|---|---|
| committer | Efraim Flashner <efraim@flashner.co.il> | 2021-09-22 16:03:19 +0300 |
| commit | f36b789f788ffe3ebdaaeac1d3a05534acaa909c (patch) | |
| tree | bd91b580003d6c11aae5b4133a66ee2f9c5b7cf0 /gnu/packages/bioinformatics.scm | |
| parent | cd5145875e2741e704611753300f43c3caabdc02 (diff) | |
| download | guix-patches-f36b789f788ffe3ebdaaeac1d3a05534acaa909c.tar guix-patches-f36b789f788ffe3ebdaaeac1d3a05534acaa909c.tar.gz | |
gnu: Update some packages using old JavaScript minifier.
* gnu/packages/minetest.scm (minetest-basic-trains): New variable.
* gnu/packages/bioinformatics.scm (bismark): Update uglifyjs input.
* gnu/packages/ci.scm (laminar): Update uglifyjs input.
* gnu/packages/cran.scm (r-shiny r-shinytree r-shinydashboard r-colourpicker
r-threejs r-flexdashboard r-networkd3 r-dygraphs): Update uglifyjs input.
* gnu/packages/javascript.scm (js-mathjax): Update uglifyjs input.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 2b67cab609..5a29d4b811 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -106,7 +106,6 @@ #:use-module (gnu packages jemalloc) #:use-module (gnu packages jupyter) #:use-module (gnu packages linux) - #:use-module (gnu packages lisp-xyz) #:use-module (gnu packages logging) #:use-module (gnu packages lsof) #:use-module (gnu packages machine-learning) @@ -148,6 +147,7 @@ #:use-module (gnu packages textutils) #:use-module (gnu packages time) #:use-module (gnu packages tls) + #:use-module (gnu packages uglifyjs) #:use-module (gnu packages vim) #:use-module (gnu packages web) #:use-module (gnu packages wget) @@ -9318,7 +9318,7 @@ Browser.") (lambda* (#:key inputs #:allow-other-keys) (let* ((file (assoc-ref inputs "plotly.js")) (installed "plotly/plotly.js")) - (let ((minified (open-pipe* OPEN_READ "uglify-js" file))) + (let ((minified (open-pipe* OPEN_READ "uglifyjs" file))) (call-with-output-file installed (cut dump-port minified <>)))) #t)) @@ -9376,7 +9376,7 @@ Browser.") "v1.39.4/dist/plotly.js")) (sha256 (base32 "138mwsr4nf5qif4mrxx286mpnagxd1xwl6k8aidrjgknaqg88zyr")))) - ("uglify-js" ,uglify-js))) + ("uglifyjs" ,node-uglify-js))) (home-page "https://www.bioinformatics.babraham.ac.uk/projects/bismark/") (synopsis "Map bisulfite treated sequence reads and analyze methylation") (description "Bismark is a program to map bisulfite treated sequencing |