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| author | Lars-Dominik Braun <lars@6xq.net> | 2021-10-05 19:08:36 +0200 |
|---|---|---|
| committer | Lars-Dominik Braun <lars@6xq.net> | 2021-10-08 09:13:54 +0200 |
| commit | e51a3f4a727d8bd74ccef6322a422c7e8a421394 (patch) | |
| tree | 65e347056d1f9585ec577d9105cbef3525f44e32 /gnu/packages/bioinformatics.scm | |
| parent | fb1ffc53ba6177e28aa296ae2e9c2e812f92e28e (diff) | |
| download | guix-patches-e51a3f4a727d8bd74ccef6322a422c7e8a421394.tar guix-patches-e51a3f4a727d8bd74ccef6322a422c7e8a421394.tar.gz | |
gnu: pigx-sars-cov2-ww: Remove dependency on pandoc-citeproc.
* gnu/packages/patches/pigx-sars-cov2-ww-no-citeproc.patch: Add patch.
* gnu/local.mk: Register it.
* gnu/packages/bioinformatics.scm (pigx-sars-cov2-ww)[source]: Use it.
[native-inputs]: Add automake/autoconf.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 12 |
1 files changed, 11 insertions, 1 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 63e91438cb..ed4470e313 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -10783,8 +10783,18 @@ based methods.") "/pigx_sars-cov2-ww-" version ".tar.gz")) (sha256 (base32 - "1hhdbwsnl0d37lrmisw5hr630xr8s41qvxflm05anh11rj8n22yw")))) + "1hhdbwsnl0d37lrmisw5hr630xr8s41qvxflm05anh11rj8n22yw")) + (patches (search-patches "pigx-sars-cov2-ww-no-citeproc.patch")))) (build-system gnu-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'bootstrap 'autoreconf + (lambda _ + (invoke "autoreconf" "-vif")))))) + (native-inputs + `(("automake" ,automake) + ("autoconf" ,autoconf))) (inputs `(("bash-minimal" ,bash-minimal) ("bwa" ,bwa) |