diff options
author | 宋文武 <iyzsong@gmail.com> | 2015-04-08 16:04:37 +0800 |
---|---|---|
committer | 宋文武 <iyzsong@gmail.com> | 2015-04-08 16:04:37 +0800 |
commit | cf3e3e374c4bd1c9f0f976fc8f02f66aff6417dc (patch) | |
tree | b4ce7938c855781af2e0a1e68b3588f96de7e7e1 /gnu/packages/bioinformatics.scm | |
parent | 4ae7559fd62c03a800b010c228639f18b9f58006 (diff) | |
parent | 068a53c36dec5ace42cc3ea89060d9a485592f08 (diff) | |
download | guix-patches-cf3e3e374c4bd1c9f0f976fc8f02f66aff6417dc.tar guix-patches-cf3e3e374c4bd1c9f0f976fc8f02f66aff6417dc.tar.gz |
Merge branch 'master' into core-updates
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r-- | gnu/packages/bioinformatics.scm | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 3725f3ffe5..9813d07e9c 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -33,6 +33,7 @@ #:use-module (gnu packages ncurses) #:use-module (gnu packages perl) #:use-module (gnu packages pkg-config) + #:use-module (gnu packages popt) #:use-module (gnu packages python) #:use-module (gnu packages tbb) #:use-module (gnu packages vim) @@ -360,6 +361,30 @@ multiple sequence alignments.") "CLIPper is a tool to define peaks in CLIP-seq datasets.") (license license:gpl2))) +(define-public clustal-omega + (package + (name "clustal-omega") + (version "1.2.1") + (source (origin + (method url-fetch) + (uri (string-append + "http://www.clustal.org/omega/clustal-omega-" + version ".tar.gz")) + (sha256 + (base32 + "02ibkx0m0iwz8nscg998bh41gg251y56cgh86bvyrii5m8kjgwqf")))) + (build-system gnu-build-system) + (inputs + `(("argtable" ,argtable))) + (home-page "http://www.clustal.org/omega/") + (synopsis "Multiple sequence aligner for protein and DNA/RNA") + (description + "Clustal-Omega is a general purpose multiple sequence alignment (MSA) +program for protein and DNA/RNA. It produces high quality MSAs and is capable +of handling data-sets of hundreds of thousands of sequences in reasonable +time.") + (license license:gpl2+))) + (define-public crossmap (package (name "crossmap") |