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| author | Ricardo Wurmus <rekado@elephly.net> | 2020-06-12 16:38:14 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-06-13 01:19:47 +0200 |
| commit | 47c7670c430b6b3b3a749d6391969badc8da3b52 (patch) | |
| tree | 202207fe2068657a182556cc58a3ac8916593296 /gnu/packages/bioinformatics.scm | |
| parent | 7039b539458b37d2b66c0d06c9ae3d71ef214eee (diff) | |
| download | guix-patches-47c7670c430b6b3b3a749d6391969badc8da3b52.tar guix-patches-47c7670c430b6b3b3a749d6391969badc8da3b52.tar.gz | |
gnu: r-scran: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.16.0.
[propagated-inputs]: Add r-iranges.
[native-inputs]: Add r-knitr.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 7 |
1 files changed, 5 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index d92b87c9db..533374b569 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -11048,14 +11048,14 @@ quality control.") (define-public r-scran (package (name "r-scran") - (version "1.14.6") + (version "1.16.0") (source (origin (method url-fetch) (uri (bioconductor-uri "scran" version)) (sha256 (base32 - "1y8wlgk5zbv7c7gcp0ahfpbh9lifab7y3zwf0093fzaw7vr1y6cr")))) + "1gm4ys4aq8h1pn45k1rxk384wjyf55izivw8kgxbrflj6j4xvvsv")))) (build-system r-build-system) (propagated-inputs `(("r-beachmat" ,r-beachmat) @@ -11069,6 +11069,7 @@ quality control.") ("r-dqrng" ,r-dqrng) ("r-edger" ,r-edger) ("r-igraph" ,r-igraph) + ("r-iranges" ,r-iranges) ("r-limma" ,r-limma) ("r-matrix" ,r-matrix) ("r-rcpp" ,r-rcpp) @@ -11077,6 +11078,8 @@ quality control.") ("r-singlecellexperiment" ,r-singlecellexperiment) ("r-statmod" ,r-statmod) ("r-summarizedexperiment" ,r-summarizedexperiment))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://bioconductor.org/packages/scran") (synopsis "Methods for single-cell RNA-Seq data analysis") (description "This package implements a variety of low-level analyses of |