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| author | Pierre Langlois <pierre.langlois@gmx.com> | 2020-06-18 00:58:41 +0200 |
|---|---|---|
| committer | Ludovic Courtès <ludo@gnu.org> | 2020-06-22 15:44:08 +0200 |
| commit | 20b545f76835605143c7b9c337dfe0539c102695 (patch) | |
| tree | d1a32207f74acb0e20aed95f97e23eac81d0f825 /gnu/packages/bioinformatics.scm | |
| parent | 3a79adab417f4fab6d9ac2b0f839b8d03ed6bb42 (diff) | |
| download | guix-patches-20b545f76835605143c7b9c337dfe0539c102695.tar guix-patches-20b545f76835605143c7b9c337dfe0539c102695.tar.gz | |
gnu: python-pandas: Update to 1.0.5.
But also keep version 0.25.3 around for packages requiring an earlier
versions, as well as version 0.24.2 for a version with python2.
* gnu/packages/python-science.scm (python-pandas): Update to 1.0.5.
[arguments]: Adapt 'patch-which phase. Add new 'prepare-x phase. Do not
delete tests that depend on "moto", they are skipped automatically.
[propagated-inputs]: Add python-jinja2.
[inputs]: Add xsel and xclip.
[native-inputs]: Add xorg-server-for-tests so we can test clipboard support.
(python-pandas-0.24): New variable.
(python2-pandas): Inherit from python-pandas-0.25.
* gnu/packages/bioinformatics.scm (python-biom-format)[propagated-inputs]:
Switch to python-pandas-0.25.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 4 |
1 files changed, 3 insertions, 1 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 784fff7c09..b24266159b 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -943,7 +943,9 @@ Python.") ("python-future" ,python-future) ("python-click" ,python-click) ("python-h5py" ,python-h5py) - ("python-pandas" ,python-pandas))) + ;; FIXME: Upgrade to pandas 1.0 when + ;; https://github.com/biocore/biom-format/issues/837 is resolved. + ("python-pandas" ,python-pandas-0.25))) (native-inputs `(("python-cython" ,python-cython) ("python-pytest" ,python-pytest) |