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| author | Ricardo Wurmus <rekado@elephly.net> | 2021-09-07 14:38:54 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-09-07 14:47:57 +0200 |
| commit | ccc1b9e5a1d2e61ba6518df07415752388e4a478 (patch) | |
| tree | 13ae90d613ff75e8e208dbd28a292cc200ae0e6e /gnu/packages/bioconductor.scm | |
| parent | 32d8a7d3baf0c188c6faa1b77d3bc9e562b3624e (diff) | |
| download | guix-patches-ccc1b9e5a1d2e61ba6518df07415752388e4a478.tar guix-patches-ccc1b9e5a1d2e61ba6518df07415752388e4a478.tar.gz | |
gnu: Add r-biotip.
* gnu/packages/bioconductor.scm (r-biotip): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 30 |
1 files changed, 30 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 1287307033..0d9344f165 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -14436,6 +14436,36 @@ expression data. The core algorithm is a Wilcoxon-Mann-Whitney test that is optimised for high performance.") (license license:gpl3+))) +(define-public r-biotip + (package + (name "r-biotip") + (version "1.6.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "BioTIP" version)) + (sha256 + (base32 + "1i6r8px0fmdjx8frpljppwql74mhx08ibvhs9y3qk91ck5h3f0js")))) + (properties `((upstream-name . "BioTIP"))) + (build-system r-build-system) + (propagated-inputs + `(("r-cluster" ,r-cluster) + ("r-genomicranges" ,r-genomicranges) + ("r-hmisc" ,r-hmisc) + ("r-igraph" ,r-igraph) + ("r-mass" ,r-mass) + ("r-psych" ,r-psych) + ("r-stringr" ,r-stringr))) + (native-inputs + `(("r-knitr" ,r-knitr))) + (home-page "https://github.com/xyang2uchicago/BioTIP") + (synopsis "R package for characterization of biological tipping-point") + (description + "This package adopts tipping-point theory to transcriptome profiles to +help unravel disease regulatory trajectory.") + (license license:gpl2))) + (define-public r-tximeta (package (name "r-tximeta") |