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| author | zimoun <zimon.toutoune@gmail.com> | 2020-12-04 03:20:55 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-12-09 12:12:36 +0100 |
| commit | 26cf5eb5686b9a0464fc886f7219c6b9e8f2a889 (patch) | |
| tree | 9db6db16890a60caaa602ce3f6a599154b73f33b /gnu/packages/bioconductor.scm | |
| parent | b58c4e7613bc3e3602042dbf340f5116f4cae4bb (diff) | |
| download | guix-patches-26cf5eb5686b9a0464fc886f7219c6b9e8f2a889.tar guix-patches-26cf5eb5686b9a0464fc886f7219c6b9e8f2a889.tar.gz | |
gnu: r-hdf5array: Fix r-rhdf5libs linking.
* gnu/packages/bioconductor.scm (r-hdf5array): [arguments]: Avoid to have a
plain directory on the list of libraries to link.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 11 |
1 files changed, 11 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index ab2595b229..0989d1bff4 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -8609,6 +8609,17 @@ provided.") "1hr149q03p09y1cjnx8av854j53041wfyq66xpsjw4mypzjf6f28")))) (properties `((upstream-name . "HDF5Array"))) (build-system r-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'fix-linking + (lambda _ + (substitute* "src/Makevars" + ;; This is to avoid having a plain directory on the list of + ;; libraries to link. + (("\\(RHDF5LIB_LIBS\\)" match) + (string-append match "/libhdf5.a"))) + #t))))) (inputs `(("zlib" ,zlib))) (propagated-inputs |