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authorzimoun <zimon.toutoune@gmail.com>2021-05-21 22:25:54 +0200
committerRicardo Wurmus <rekado@elephly.net>2021-05-31 15:37:58 +0200
commit22cda2e4320a59a4c26fbbbadf4064526d2b2c82 (patch)
tree0424a6cb3e9c70cf4ff099e40670895e3f198309 /gnu/packages/bioconductor.scm
parent32ae36e96f9b076901af94c723e3d156595d5bc5 (diff)
downloadguix-patches-22cda2e4320a59a4c26fbbbadf4064526d2b2c82.tar
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gnu: r-affy: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-affy): Move from here... * gnu/packages/bioconductor.scm (r-affy): ...to here.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm28
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 07ce719d7d..25094e771e 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1755,6 +1755,34 @@ optimized in C++, and the main interface function provides an easy way of
performing parallel computations on multicore machines.")
(license license:gpl2+)))
+(define-public r-affy
+ (package
+ (name "r-affy")
+ (version "1.68.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "affy" version))
+ (sha256
+ (base32
+ "0ywz548cbzk2k1njnxhlk5ydzvz2dk78ka8kx53gwrmdc4sc2b06"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-affyio" ,r-affyio)
+ ("r-biobase" ,r-biobase)
+ ("r-biocgenerics" ,r-biocgenerics)
+ ("r-biocmanager" ,r-biocmanager)
+ ("r-preprocesscore" ,r-preprocesscore)
+ ("r-zlibbioc" ,r-zlibbioc)))
+ (inputs
+ `(("zlib" ,zlib)))
+ (home-page "https://bioconductor.org/packages/affy")
+ (synopsis "Methods for affymetrix oligonucleotide arrays")
+ (description
+ "This package contains functions for exploratory oligonucleotide array
+analysis.")
+ (license license:lgpl2.0+)))
+
(define-public r-affycomp
(package
(name "r-affycomp")