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author | Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> | 2022-04-13 00:30:47 +0200 |
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committer | Ricardo Wurmus <rekado@elephly.net> | 2022-04-14 13:18:07 +0200 |
commit | 1b2b1c30e2adec2afa868badbada45d7d7cd755d (patch) | |
tree | 853176f2fae4c46f6b863883e37b36dac67e819b /gnu/packages/bioconductor.scm | |
parent | dd9d26bce626cb2900910f1706de38c47a52915a (diff) | |
download | guix-patches-1b2b1c30e2adec2afa868badbada45d7d7cd755d.tar guix-patches-1b2b1c30e2adec2afa868badbada45d7d7cd755d.tar.gz |
gnu: Add r-acde.
* gnu/packages/bioconductor.scm (r-acde): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r-- | gnu/packages/bioconductor.scm | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 786e79b931..6559e69711 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -11729,6 +11729,31 @@ array noise or normalization methods. It is also very fast and can be applied on whole-genome tiling array experiments quite easily with enough memory.") (license license:gpl2+))) +(define-public r-acde + (package + (name "r-acde") + (version "1.24.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "acde" version)) + (sha256 + (base32 + "13ks87am73m3bjn9ljapxml2a9cxdpgv9flwvly8aqmi3ndxyqi6")))) + (properties `((upstream-name . "acde"))) + (build-system r-build-system) + (propagated-inputs (list r-boot)) + (home-page "https://bioconductor.org/packages/acde") + (synopsis + "Identification of differentially expressed genes with artificial components") + (description + "This package provides a multivariate inferential analysis method for +detecting differentially expressed genes in gene expression data. It uses +artificial components, close to the data's principal components but with an +exact interpretation in terms of differential genetic expression, to identify +differentially expressed genes while controlling the @dfn{false discovery +rate} (FDR).") + (license license:gpl3))) + ;; This is a CRAN package, but it depends on Bioconductor packages, so we put ;; it here. (define-public r-activedriverwgs |